ClCG02G021670 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGAAGGAAGGGAATTTTGGGTATTTCATTTCCACGCCATGAGATAGTCTCCAAGGCGGAGCCTCTCAGATCAACAAATTCCGCATCTCTTCCCTTGTTTGCTCTTTGAAGAAGCTCCTCTTGAGTTCGATCGCTATCTCTCTCAACCCCAAATCCTTCGGTACGGTCGACATCTTCTTGTTTCCAGGTAGGGTTTTGCTTTTACTTAACTATTTTGGCTAAGAATTGGCCGAGCCCGCTGTTAAATTTCCTTTAGAGCATTCCTGCAGGTTGCACATTTTTATTCAACTAACTTGTATTGCTCACGTTTCTCGATTCCTATGATGTTGCTTTTATTGCCAATAATTTCTATGAACATTTTTTTACGATTGATTCTATGTTATTTTTGTTCAAATGCCTTGGGATTCGTATTTTTTTGTCATATTTACGCTATTTACATTTTTTAATCTAGGATTTAGAAGATTTCACTAAATAAATTCTCTAAACTAGAGGCGCCAATGCAATGTAATTTGAAGTATTCTCTCAATAGTATATTGTTCACGCTCTGTCTATGAATGTAGCTAACACACTATTAGTGCATCACGTAAATTTTTGTGTTGATTCTTTACTGTTTATGCTTTTTTTTGTTTATCTTTATTTGTCGATTTCACATCACTTTCGTTCCTAATTAATATTGATTTCTACTTGTTTGGTCTTCTATAAATTTCCAAACCCACAAGTGAGGAAAGTGTGAGTTGATATAATATTGTAATTTTGTTTGCATTCATTGCCAATTAGTGGAATGAAGTTCTGCTTGGAGCTCAACCATCTGTTCTTTTGTGTCTGTATTTGTATATGTGTCCATGGAGATGGAGGCTTAAGTTTCCCAGTTTAAGATTAGCTACAGAAGTGTTATGATTTGCTAGTAGTTGTGGATTGCTATTTAGTTTTGTTAGTCAATAATTGAGAATGCTGCATTTACAGAAGACTTCATTTCACATCTCCTGTTGTGTATAAAATTATGAAATCTGGTCATTGTGATATTTTCGTTCTTTTGTTGTTCAATATAGTTCTTTTCGTAATGTTCTCAAAGTCGAGAGTATCTGATACACTTGTTTCAATCAAACATATTGTGGCCGAGAAATTTGGAAGATGTTCTTATTAATTGAGCATTGTTCATTGTATAGAGTTGGTGTCGGTAGAACTAGAGGTAACCTTGTTGTCAATATATCAAATGTAGCATTTTGTTGAGCCTTGATTTGATTTCTGTAAAGCATTTCCTTCCTCTTGTCAATTCAAGGTGGTTGGTGCTTTCTTGTATGATAAAGTTCTTTCTAGGTTAAAGTTTACAGAATATTAATTTCTATATGCCTTAACAGTTTTAGATCTAAAATGTCTCTCTTCTTTTCCTTACTGTCTTGGTTCCTGTGTTTTCTTCTCTCCTCTTCCTTTTCAGCTGATGATATGCACTTGAGGCCTTTTTGTTGCACTTTTTAAAACCAAAAGATCTGTGATTTACTAAAAGTAAAAAAGAAAAAAGGAAGCAATCTGGTATATTTGCCAATTTGTTTGTCTTGTTTACTTGCTGATGACAGACTTAGATCTGTTCTGATTAATTTTCTGAGTGCTTAAAACTGCTTTTTTTTTTTTTTTTTTCACTTTAAAATACTTTTTCAAGCACTTAAATAATCAATCCAAATAGATATTTATACTCCTATTACTACTCTTTGATACTCAATCAATTCCTCTTTTTGGATGCACCCCTATAGTCCCATATTCATATTTAGTAGTTCCTGAACTATTTCTTCTATTTTAAGGATCATTGAAATAAACAAGAATGCTATTTCTATGAATAATATCATTTATGTGTCGGGGTGGTAGCTCTTTTTCTCGTTCTTGAAGTGATTCTAATGAATTCATGCCATTAAATTAGAATCATCGTGAAAAATATGTGAGATTAGATTGAATTACTATGAATTTTTCACTTATTTTGTCAGTTTCTTTTCATATCACTCATAGAAAACTCGATGACACGGCGTCGGAATTTGATTGTTGCCATTGGGTTGATAGCCTTTGCATCTGCTGGATTAGCATTTCCCTTTTACATGGCGTAAGTAAATAAATTCATTACTTTACTGACAATTTCATTCCTTTGAAGTTTGCATCTTTGAATGAATGAATGAATCTGCACAAGTTAATATTGAAAAGGATTATGATCCAGGTCTTCCAAAAAACCAGTTATAGATCCGGCAAAGCCACTTCCACCGCAGGCCACTTTTCGAGGTCCTTATATAAACACTGGCTCCCGGGACGTGGGACCTGACCATCAAACTTACACTAAGAAGTGATTTCTTTTGAATGCTTCTTTTCAGTAAAGTATGTGTTGGTTTATTTCAATGTAGAAGAAGACTACATGAAATTTTTTTTCTCTCTTATGGAGAAACAGTAGTTCGCTTGATTTAGAAATATGTGTTGATCAAAATATTGATGTCTATATAGGTATTGAGATTTTAGTTTTACCGATGTATTGATAAAATATTGCTATTTATGTAAATTACAAAAAAATATTTAAATGAACAATTAAA GAAGAAGGAAGGGAATTTTGGGTATTTCATTTCCACGCCATGAGATAGTCTCCAAGGCGGAGCCTCTCAGATCAACAAATTCCGCATCTCTTCCCTTGTTTGCTCTTTGAAGAAGCTCCTCTTGAGTTCGATCGCTATCTCTCTCAACCCCAAATCCTTCGGTACGGTCGACATCTTCTTGTTTCCAGTTTCTTTTCATATCACTCATAGAAAACTCGATGACACGGCGTCGGAATTTGATTGTTGCCATTGGGTTGATAGCCTTTGCATCTGCTGGATTAGCATTTCCCTTTTACATGGCGTCTTCCAAAAAACCAGTTATAGATCCGGCAAAGCCACTTCCACCGCAGGCCACTTTTCGAGGTCCTTATATAAACACTGGCTCCCGGGACGTGGGACCTGACCATCAAACTTACACTAAGAAGTGATTTCTTTTGAATGCTTCTTTTCAGTAAAGTATGTGTTGGTTTATTTCAATGTAGAAGAAGACTACATGAAATTTTTTTTCTCTCTTATGGAGAAACAGTAGTTCGCTTGATTTAGAAATATGTGTTGATCAAAATATTGATGTCTATATAGGTATTGAGATTTTAGTTTTACCGATGTATTGATAAAATATTGCTATTTATGTAAATTACAAAAAAATATTTAAATGAACAATTAAA ATGACACGGCGTCGGAATTTGATTGTTGCCATTGGGTTGATAGCCTTTGCATCTGCTGGATTAGCATTTCCCTTTTACATGGCGTCTTCCAAAAAACCAGTTATAGATCCGGCAAAGCCACTTCCACCGCAGGCCACTTTTCGAGGTCCTTATATAAACACTGGCTCCCGGGACGTGGGACCTGACCATCAAACTTACACTAAGAAGTGA MTRRRNLIVAIGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
BLAST of ClCG02G021670 vs. TrEMBL
Match: G7JM87_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_4g057190 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.7e-27 Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = 1
BLAST of ClCG02G021670 vs. TrEMBL
Match: V4LEU8_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10015213mg PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-26 Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 1
BLAST of ClCG02G021670 vs. TrEMBL
Match: A0A061GW49_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041582 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-26 Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1
BLAST of ClCG02G021670 vs. TrEMBL
Match: A0A0D3EDA4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-26 Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 1
BLAST of ClCG02G021670 vs. TrEMBL
Match: A0A078GQP9_BRANA (BnaC09g36200D protein OS=Brassica napus GN=BnaC09g36200D PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-26 Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 1
BLAST of ClCG02G021670 vs. TAIR10
Match: AT5G22875.1 (AT5G22875.1 unknown protein) HSP 1 Score: 124.0 bits (310), Expect = 3.6e-29 Identity = 57/69 (82.61%), Postives = 60/69 (86.96%), Query Frame = 1
BLAST of ClCG02G021670 vs. NCBI nr
Match: gi|659130932|ref|XP_008465426.1| (PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo]) HSP 1 Score: 141.4 bits (355), Expect = 6.1e-31 Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 1
BLAST of ClCG02G021670 vs. NCBI nr
Match: gi|449456062|ref|XP_004145769.1| (PREDICTED: uncharacterized protein LOC101222012 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 5.2e-30 Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 1
BLAST of ClCG02G021670 vs. NCBI nr
Match: gi|357472077|ref|XP_003606323.1| (transmembrane protein, putative [Medicago truncatula]) HSP 1 Score: 129.4 bits (324), Expect = 2.4e-27 Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = 1
BLAST of ClCG02G021670 vs. NCBI nr
Match: gi|567176676|ref|XP_006400796.1| (hypothetical protein EUTSA_v10015213mg [Eutrema salsugineum]) HSP 1 Score: 126.3 bits (316), Expect = 2.0e-26 Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 1
BLAST of ClCG02G021670 vs. NCBI nr
Match: gi|590587793|ref|XP_007016057.1| (Uncharacterized protein TCM_041582 [Theobroma cacao]) HSP 1 Score: 126.3 bits (316), Expect = 2.0e-26 Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |