ClCG02G019440 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G019440
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRing finger protein, putative
LocationCG_Chr02 : 34152140 .. 34152736 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAATTCCTCACAGTCTTCACTCAATTTTCCATCTTTTTATCCATTTGGTCATGCCTTTAGGACCATTCTCTCTTACAATGGAACTGTAATGTTAGCTGCCTTAATCTCTTTGCTTCTTGTCACCATCTTTGTTCTTCTCCTCCACATCTATGCCAAATGGTTCCTCACTCAGGCCCGTCACCAGCGCCGCAGCTCTATCGCTGTCTCTCAGGTGTTAGGACAGCCTCGGTTGCACCACTTTCATTCCATATCGTTCGATCACTCCACCCCACCTGCTCATTCTCCCACCAAAGGACTTGACGCCTCGGTGATTTCCGCTATCCCTCTTTTTATTTACGTGTCGGAAAATCAGTGCAAGATTGGATTGGAATGTGTTATTTGCTTGAGCTTGTTTGAAGAGAATGAGATTGGGAGGAGCTTGCCCAAGTGTAAGCATGCGTTTCATGTCGAGTGCATCGACATGTGGCTCAGTTCTCATTCGAATTGTCCGATTTGTAGAGCTCCCGTGGTTCGCCATCAGAATTCAAGGAATGGAATTGGTAATAACTTGGAATTGAATGAAAATGAATTGCAGATTGTTATTGGTGGATAA

mRNA sequence

ATGTTCAATTCCTCACAGTCTTCACTCAATTTTCCATCTTTTTATCCATTTGGTCATGCCTTTAGGACCATTCTCTCTTACAATGGAACTGTAATGTTAGCTGCCTTAATCTCTTTGCTTCTTGTCACCATCTTTGTTCTTCTCCTCCACATCTATGCCAAATGGTTCCTCACTCAGGCCCGTCACCAGCGCCGCAGCTCTATCGCTGTCTCTCAGGTGTTAGGACAGCCTCGGTTGCACCACTTTCATTCCATATCGTTCGATCACTCCACCCCACCTGCTCATTCTCCCACCAAAGGACTTGACGCCTCGGTGATTTCCGCTATCCCTCTTTTTATTTACGTGTCGGAAAATCAGTGCAAGATTGGATTGGAATGTGTTATTTGCTTGAGCTTGTTTGAAGAGAATGAGATTGGGAGGAGCTTGCCCAAGTGTAAGCATGCGTTTCATGTCGAGTGCATCGACATGTGGCTCAGTTCTCATTCGAATTGTCCGATTTGTAGAGCTCCCGTGGTTCGCCATCAGAATTCAAGGAATGGAATTGGTAATAACTTGGAATTGAATGAAAATGAATTGCAGATTGTTATTGGTGGATAA

Coding sequence (CDS)

ATGTTCAATTCCTCACAGTCTTCACTCAATTTTCCATCTTTTTATCCATTTGGTCATGCCTTTAGGACCATTCTCTCTTACAATGGAACTGTAATGTTAGCTGCCTTAATCTCTTTGCTTCTTGTCACCATCTTTGTTCTTCTCCTCCACATCTATGCCAAATGGTTCCTCACTCAGGCCCGTCACCAGCGCCGCAGCTCTATCGCTGTCTCTCAGGTGTTAGGACAGCCTCGGTTGCACCACTTTCATTCCATATCGTTCGATCACTCCACCCCACCTGCTCATTCTCCCACCAAAGGACTTGACGCCTCGGTGATTTCCGCTATCCCTCTTTTTATTTACGTGTCGGAAAATCAGTGCAAGATTGGATTGGAATGTGTTATTTGCTTGAGCTTGTTTGAAGAGAATGAGATTGGGAGGAGCTTGCCCAAGTGTAAGCATGCGTTTCATGTCGAGTGCATCGACATGTGGCTCAGTTCTCATTCGAATTGTCCGATTTGTAGAGCTCCCGTGGTTCGCCATCAGAATTCAAGGAATGGAATTGGTAATAACTTGGAATTGAATGAAAATGAATTGCAGATTGTTATTGGTGGATAA

Protein sequence

MFNSSQSSLNFPSFYPFGHAFRTILSYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRSSIAVSQVLGQPRLHHFHSISFDHSTPPAHSPTKGLDASVISAIPLFIYVSENQCKIGLECVICLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVRHQNSRNGIGNNLELNENELQIVIGG
Homology
[Close]
BLAST of ClCG02G019440 vs. Swiss-Prot
Match: ATL63_ARATH (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.1e-32
Identity = 81/191 (42.41%), Postives = 111/191 (58.12%), Query Frame = 1 

Query: 22  RTILSYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQ--------ARHQRRS------S 81
           + + SYN  V+LAAL+ LLLV +FVLLLH YA++F +         ARH+RR       +
Sbjct: 20  KILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRT 79

Query: 82  IAVSQVLGQPRLHHFHSISFDHSTPPAHSPT---KGLDASVISAIPLFIYV-SENQCKIG 141
           +  ++++    L  F     D  + PA + T   KGLD+SVIS+IPLF+Y  +E +    
Sbjct: 80  VTTTRIIPSLPLGGFD----DGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEE 139

Query: 142 LECVICLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVRHQNSRNGIGN 195
            ECVICL L+E  + GR L  C H FHVECIDMWLSSHS CP+CR+PV+   +    +  
Sbjct: 140 EECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENLKL 199

[Close]
BLAST of ClCG02G019440 vs. Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-27
Identity = 69/172 (40.12%), Postives = 98/172 (56.98%), Query Frame = 1 

Query: 28  NGTVMLAALISLLLVTIFVLLLHIYAKWFLTQAR--HQRRSSIAVSQVLGQPRLHHFHSI 87
           +G +ML+A++ L  V I ++ LH+YA+W+L +AR  H RR S        + R       
Sbjct: 27  SGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRS--------RNRRATMVFF 86

Query: 88  SFDHSTPPAHS-PTKGLDASVISAIPLFIYVSENQCKIGLECVICLSLFEENEIGRSLPK 147
           + D ST       ++GLD +VI ++P+F +  E   K  +EC +CLS FEE+E GR LP 
Sbjct: 87  TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETH-KDPIECAVCLSEFEESETGRVLPN 146

Query: 148 CKHAFHVECIDMWLSSHSNCPICRAPVVRHQNSRNGIGNNLELNENELQIVI 197
           C+H FHV+CIDMW  SHS CP+CR+ V     S  GI +     E E+ I +
Sbjct: 147 CQHTFHVDCIDMWFHSHSTCPLCRSLV----ESLAGIESTAAAREREVVIAV 185

[Close]
BLAST of ClCG02G019440 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.4e-25
Identity = 57/146 (39.04%), Postives = 78/146 (53.42%), Query Frame = 1 

Query: 26  SYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRSSIAVSQVLGQPRLHHFHSI 85
           S NG +MLA++I L +  I +L  H YA+W   +   + R  I+           H  S+
Sbjct: 23  SLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISA----------HLRSL 82

Query: 86  SFDHSTPPAHSPTKGLDASVISAIPLFIYVSENQCKIGLECVICLSLFEENEIGRSLPKC 145
           +       + S    LD +V+  IP+F+Y  +       EC +CLS FEE++ GR LPKC
Sbjct: 83  AAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKC 142

Query: 146 KHAFHVECIDMWLSSHSNCPICRAPV 172
            H FHV+CID W  S S+CP+CRAPV
Sbjct: 143 GHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]
BLAST of ClCG02G019440 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.6e-23
Identity = 59/146 (40.41%), Postives = 79/146 (54.11%), Query Frame = 1 

Query: 28  NGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRSSIAVSQVLGQPRLHHFHSISF 87
           NG +ML+++I L +  I +L  H YA+W     RH RR    +          H  ++S 
Sbjct: 25  NGKIMLSSVIVLFVAVIMILCFHSYARWLFR--RHNRRIRRRIRS--------HLRTLS- 84

Query: 88  DHSTPPAHSPTKGLDASVISAIPLFIYVSENQC--KIGLECVICLSLFEENEIGRSLPKC 147
                 A    + LD +V+  IP+F+Y S+N    +   EC +CLS FEE + GR LPKC
Sbjct: 85  ------ASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKC 144

Query: 148 KHAFHVECIDMWLSSHSNCPICRAPV 172
            H+FHV+CID W  S S CP+CRAPV
Sbjct: 145 GHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]
BLAST of ClCG02G019440 vs. Swiss-Prot
Match: ATL17_ARATH (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 5.1e-22
Identity = 52/140 (37.14%), Postives = 80/140 (57.14%), Query Frame = 1 

Query: 32  MLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRSSIAVSQVLGQPRLHHFHSISFDHST 91
           ML   I +LL+ I ++ LH+Y +W+L ++    R++ A +                   T
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLLRSSPFNRTTAAST-----------------FFT 60

Query: 92  PPAHSPTKGLDASVISAIPLFIYVSENQCKIGLECVICLSLFEENEIGRSLPKCKHAFHV 151
            P+ +P  GL+ S+I ++P+F + S       +EC +CLS F++NE GR +P CKH FHV
Sbjct: 61  DPSSTPG-GLNPSIIKSLPIFTF-SAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHV 120

Query: 152 ECIDMWLSSHSNCPICRAPV 172
            CIDMW  SHS+CP+CR+ +
Sbjct: 121 HCIDMWFHSHSSCPLCRSQI 121

[Close]
BLAST of ClCG02G019440 vs. TrEMBL
Match: A0A0A0KBL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G182680 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 8.6e-93
Identity = 176/195 (90.26%), Postives = 184/195 (94.36%), Query Frame = 1 

Query: 1   MFNSSQSSLNFPSFYP-FGHAFRTILSYNGTV-MLAALISLLLVTIFVLLLHIYAKWFLT 60
           MFNSSQSSLNFPSF P FGHAF++I+SYNG+V MLAALISL LVTIFVLLLHIYA+WFLT
Sbjct: 1   MFNSSQSSLNFPSFDPLFGHAFKSIISYNGSVLMLAALISLFLVTIFVLLLHIYARWFLT 60

Query: 61  QARHQRRSSIAVSQVLGQPRLHHFHSISFDHSTPPA-HSPTKGLDASVISAIPLFIYVSE 120
           QARHQRRSSIAVSQVLGQPRLHHFHSISFDH+TPPA  SPTKGL ASVISAIPLFIY+SE
Sbjct: 61  QARHQRRSSIAVSQVLGQPRLHHFHSISFDHTTPPAARSPTKGLAASVISAIPLFIYMSE 120

Query: 121 NQCKIGLECVICLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVR-HQN 180
           NQCKIGLECVICLSLFEENEIGRSLPKCKH FHVECIDMWLSSHSNCPICR PVVR HQ+
Sbjct: 121 NQCKIGLECVICLSLFEENEIGRSLPKCKHVFHVECIDMWLSSHSNCPICRDPVVRTHQS 180

Query: 181 SRNGIGNNLELNENE 192
            RNGIGNNLELNENE
Sbjct: 181 LRNGIGNNLELNENE 195

[Close]
BLAST of ClCG02G019440 vs. TrEMBL
Match: B9GGQ3_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0001s28610g PE=4 SV=2)

HSP 1 Score: 219.9 bits (559), Expect = 2.7e-54
Identity = 109/171 (63.74%), Postives = 131/171 (76.61%), Query Frame = 1 

Query: 7   SSLNFPSFYPFGHAFRTILSYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRS 66
           S++  P   P  H   +I SY+  +MLAA+ISLLLV +FVLLLHIYAKWFL QARH+RRS
Sbjct: 3   SAVESPEHNPMSHLINSISSYDSNIMLAAVISLLLVILFVLLLHIYAKWFLAQARHRRRS 62

Query: 67  S-IAVSQVLGQPRLHHFHSISFDHSTPPAHSPTKGLDASVISAIPLFIYVSENQCKIGLE 126
           S ++VS VL   R HHFH+ + D  T  + SP+KGLD SVIS+IPLF+Y +E +CK GLE
Sbjct: 63  SSVSVSHVLRASRFHHFHNFTVD--TTFSTSPSKGLDRSVISSIPLFVYKAE-ECKQGLE 122

Query: 127 CVICLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVRHQN 177
           CVICLS FEENE+G+SL KC H FHVECIDMWL+SHSNCP+CRAP V   N
Sbjct: 123 CVICLSPFEENEVGKSLTKCGHGFHVECIDMWLNSHSNCPVCRAPAVGDDN 170

[Close]
BLAST of ClCG02G019440 vs. TrEMBL
Match: D7SJU6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06930 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.3e-53
Identity = 102/155 (65.81%), Postives = 127/155 (81.94%), Query Frame = 1 

Query: 16  PFGHAFRTILSYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRSSIAVSQVLG 75
           PF    +++ SYNG VMLAA++SLLLV +FVL+LHIYAKWFL  ARH+RRSS++VS VL 
Sbjct: 13  PFTDFMKSVFSYNGNVMLAAIVSLLLVILFVLVLHIYAKWFLAHARHRRRSSVSVSHVLR 72

Query: 76  QPRLHHFHSISFDHSTPPAHSPTKGLDASVISAIPLFIYVSENQCKIGLECVICLSLFEE 135
             R HHFH+ +F+  T  + SPTKGLD+S IS+IPLF+Y +E   K GLECVICLS+FE+
Sbjct: 73  PTRFHHFHTFTFE--TTLSGSPTKGLDSSAISSIPLFVYKAEEH-KHGLECVICLSVFED 132

Query: 136 NEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAP 171
           +++GR+LPKC HAFHV+CIDMWL SHSNCPICRAP
Sbjct: 133 DDVGRNLPKCGHAFHVQCIDMWLHSHSNCPICRAP 164

[Close]
BLAST of ClCG02G019440 vs. TrEMBL
Match: B9HND1_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0009s07800g PE=4 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-51
Identity = 106/186 (56.99%), Postives = 132/186 (70.97%), Query Frame = 1 

Query: 7   SSLNFPSFYPFGHAFRTILSYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRS 66
           +++  P   P  H   +I SY+  +MLAA+ISLL+V +FVLLLHIYAKWFL QAR++RRS
Sbjct: 3   TTIESPKHNPMSHLINSISSYDSNIMLAAVISLLVVILFVLLLHIYAKWFLAQARNRRRS 62

Query: 67  S-IAVSQVLGQPRLHHFHSISFDHSTPPAHSPTKGLDASVISAIPLFIYVSENQCKIGLE 126
           S +  S VL   R HH H+ + D  T  + S +KGLD SVIS+IPLF+Y +E +CK GLE
Sbjct: 63  SSVTASHVLLPSRFHHLHNFTID--TTFSTSTSKGLDTSVISSIPLFVYKAE-ECKQGLE 122

Query: 127 CVICLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVRHQNSRNGIGNNL 186
           CVICLS FEENE GRSL +C H FHVECIDMWL+SHSNCP+CRAP V   N     G ++
Sbjct: 123 CVICLSPFEENEAGRSLTRCGHGFHVECIDMWLNSHSNCPVCRAPAVSDDNDIASDGKSM 182

Query: 187 ELNENE 192
           E +  E
Sbjct: 183 EASTRE 185

[Close]
BLAST of ClCG02G019440 vs. TrEMBL
Match: V4SCT6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029990mg PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.1e-51
Identity = 110/198 (55.56%), Postives = 141/198 (71.21%), Query Frame = 1 

Query: 19  HAFRTILSYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQR-RSSIAVSQVLGQP 78
           H    + SY+G V+LAA++SLLLV +FVLLLHIYAKWFL QAR +R RSS++VS VL   
Sbjct: 4   HFLENVSSYDGNVLLAAIVSLLLVILFVLLLHIYAKWFLAQARQRRSRSSMSVSHVLLPA 63

Query: 79  RLHHFHSISFD---------HSTPPAHSPTKGLDASVISAIPLFIYVSENQCKIGLECVI 138
           R HHFHS +FD         ++T  + S +KGLDAS+I++IPLF+Y S ++ K GLECVI
Sbjct: 64  RFHHFHSFTFDVDNNANNNINNTTISSSSSKGLDASLIASIPLFVYTS-SEYKQGLECVI 123

Query: 139 CLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVRHQ------NSRNGIG 198
           CLS FEE+++GRSLPKC H FHVECIDMWL SH NCP+CRAPV   +      ++ N  G
Sbjct: 124 CLSAFEESDVGRSLPKCGHGFHVECIDMWLHSHLNCPVCRAPVAGEKKVENLDSTENNEG 183

[Close]
BLAST of ClCG02G019440 vs. TAIR10
Match: AT5G58580.1 (AT5G58580.1 TOXICOS EN LEVADURA 63)

HSP 1 Score: 138.7 bits (348), Expect = 4.0e-33
Identity = 81/191 (42.41%), Postives = 111/191 (58.12%), Query Frame = 1 

Query: 22  RTILSYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQ--------ARHQRRS------S 81
           + + SYN  V+LAAL+ LLLV +FVLLLH YA++F +         ARH+RR       +
Sbjct: 20  KILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRT 79

Query: 82  IAVSQVLGQPRLHHFHSISFDHSTPPAHSPT---KGLDASVISAIPLFIYV-SENQCKIG 141
           +  ++++    L  F     D  + PA + T   KGLD+SVIS+IPLF+Y  +E +    
Sbjct: 80  VTTTRIIPSLPLGGFD----DGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEE 139

Query: 142 LECVICLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVRHQNSRNGIGN 195
            ECVICL L+E  + GR L  C H FHVECIDMWLSSHS CP+CR+PV+   +    +  
Sbjct: 140 EECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENLKL 199

[Close]
BLAST of ClCG02G019440 vs. TAIR10
Match: AT3G16720.1 (AT3G16720.1 TOXICOS EN LEVADURA 2)

HSP 1 Score: 123.2 bits (308), Expect = 1.7e-28
Identity = 69/172 (40.12%), Postives = 98/172 (56.98%), Query Frame = 1 

Query: 28  NGTVMLAALISLLLVTIFVLLLHIYAKWFLTQAR--HQRRSSIAVSQVLGQPRLHHFHSI 87
           +G +ML+A++ L  V I ++ LH+YA+W+L +AR  H RR S        + R       
Sbjct: 27  SGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRS--------RNRRATMVFF 86

Query: 88  SFDHSTPPAHS-PTKGLDASVISAIPLFIYVSENQCKIGLECVICLSLFEENEIGRSLPK 147
           + D ST       ++GLD +VI ++P+F +  E   K  +EC +CLS FEE+E GR LP 
Sbjct: 87  TADPSTAATSVVASRGLDPNVIKSLPVFTFSDETH-KDPIECAVCLSEFEESETGRVLPN 146

Query: 148 CKHAFHVECIDMWLSSHSNCPICRAPVVRHQNSRNGIGNNLELNENELQIVI 197
           C+H FHV+CIDMW  SHS CP+CR+ V     S  GI +     E E+ I +
Sbjct: 147 CQHTFHVDCIDMWFHSHSTCPLCRSLV----ESLAGIESTAAAREREVVIAV 185

[Close]
BLAST of ClCG02G019440 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 115.2 bits (287), Expect = 4.7e-26
Identity = 57/146 (39.04%), Postives = 78/146 (53.42%), Query Frame = 1 

Query: 26  SYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRSSIAVSQVLGQPRLHHFHSI 85
           S NG +MLA++I L +  I +L  H YA+W   +   + R  I+           H  S+
Sbjct: 23  SLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISA----------HLRSL 82

Query: 86  SFDHSTPPAHSPTKGLDASVISAIPLFIYVSENQCKIGLECVICLSLFEENEIGRSLPKC 145
           +       + S    LD +V+  IP+F+Y  +       EC +CLS FEE++ GR LPKC
Sbjct: 83  AAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKC 142

Query: 146 KHAFHVECIDMWLSSHSNCPICRAPV 172
            H FHV+CID W  S S+CP+CRAPV
Sbjct: 143 GHVFHVDCIDTWFRSRSSCPLCRAPV 158

[Close]
BLAST of ClCG02G019440 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 59/146 (40.41%), Postives = 79/146 (54.11%), Query Frame = 1 

Query: 28  NGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRSSIAVSQVLGQPRLHHFHSISF 87
           NG +ML+++I L +  I +L  H YA+W     RH RR    +          H  ++S 
Sbjct: 25  NGKIMLSSVIVLFVAVIMILCFHSYARWLFR--RHNRRIRRRIRS--------HLRTLS- 84

Query: 88  DHSTPPAHSPTKGLDASVISAIPLFIYVSENQC--KIGLECVICLSLFEENEIGRSLPKC 147
                 A    + LD +V+  IP+F+Y S+N    +   EC +CLS FEE + GR LPKC
Sbjct: 85  ------ASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKC 144

Query: 148 KHAFHVECIDMWLSSHSNCPICRAPV 172
            H+FHV+CID W  S S CP+CRAPV
Sbjct: 145 GHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]
BLAST of ClCG02G019440 vs. TAIR10
Match: AT4G15975.1 (AT4G15975.1 RING/U-box superfamily protein)

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-23
Identity = 52/138 (37.68%), Postives = 80/138 (57.97%), Query Frame = 1 

Query: 32  MLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRSSIAVSQVLGQPRLHHFHSISFDHST 91
           ML   I +LL+ I ++ LH+Y +W+L ++    R++ A +                   T
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLLRSSPFNRTTAAST-----------------FFT 60

Query: 92  PPAHSPTKGLDASVISAIPLFIYVSENQCKIGLECVICLSLFEENEIGRSLPKCKHAFHV 151
            P+ +P  GL+ S+I ++P+F + S       +EC +CLS F++NE GR +P CKH FHV
Sbjct: 61  DPSSTPG-GLNPSIIKSLPIFTF-SAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHV 119

Query: 152 ECIDMWLSSHSNCPICRA 170
           +CIDMW  SHS+CP+CR+
Sbjct: 121 DCIDMWFHSHSSCPLCRS 119

[Close]
BLAST of ClCG02G019440 vs. NCBI nr
Match: gi|659130624|ref|XP_008465265.1| (PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo])

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-95
Identity = 179/197 (90.86%), Postives = 186/197 (94.42%), Query Frame = 1 

Query: 1   MFNSSQSSLNFPSFYP-FGHAFRTILSYNGTV-MLAALISLLLVTIFVLLLHIYAKWFLT 60
           MFNSS SS NFPSF P FGH F++I+SYNG+V MLAALISLLLVT+FVLLLHIYAKWFLT
Sbjct: 1   MFNSSLSSPNFPSFDPLFGHVFKSIISYNGSVLMLAALISLLLVTVFVLLLHIYAKWFLT 60

Query: 61  QARHQRRSSIAVSQVLGQPRLHHFHSISFDHSTPPAHSPTKGLDASVISAIPLFIYVSEN 120
           QARHQRRSSIAVSQVLGQPRLHHFHSISFDH+TPPA SPTKGLDAS ISAIPLFIYVSEN
Sbjct: 61  QARHQRRSSIAVSQVLGQPRLHHFHSISFDHTTPPARSPTKGLDASAISAIPLFIYVSEN 120

Query: 121 QCKIGLECVICLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVR-HQNS 180
           QCKIGLECVICLSLFEENEIGRSLPKCKH FHVECIDMWLSSHSNCPICRAPVVR HQ+ 
Sbjct: 121 QCKIGLECVICLSLFEENEIGRSLPKCKHVFHVECIDMWLSSHSNCPICRAPVVRTHQSL 180

Query: 181 RNGIGNNLELNENELQI 195
           RNGIGNNLELNENELQI
Sbjct: 181 RNGIGNNLELNENELQI 197

[Close]
BLAST of ClCG02G019440 vs. NCBI nr
Match: gi|700191861|gb|KGN47065.1| (hypothetical protein Csa_6G182680 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 1.2e-92
Identity = 176/195 (90.26%), Postives = 184/195 (94.36%), Query Frame = 1 

Query: 1   MFNSSQSSLNFPSFYP-FGHAFRTILSYNGTV-MLAALISLLLVTIFVLLLHIYAKWFLT 60
           MFNSSQSSLNFPSF P FGHAF++I+SYNG+V MLAALISL LVTIFVLLLHIYA+WFLT
Sbjct: 1   MFNSSQSSLNFPSFDPLFGHAFKSIISYNGSVLMLAALISLFLVTIFVLLLHIYARWFLT 60

Query: 61  QARHQRRSSIAVSQVLGQPRLHHFHSISFDHSTPPA-HSPTKGLDASVISAIPLFIYVSE 120
           QARHQRRSSIAVSQVLGQPRLHHFHSISFDH+TPPA  SPTKGL ASVISAIPLFIY+SE
Sbjct: 61  QARHQRRSSIAVSQVLGQPRLHHFHSISFDHTTPPAARSPTKGLAASVISAIPLFIYMSE 120

Query: 121 NQCKIGLECVICLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVR-HQN 180
           NQCKIGLECVICLSLFEENEIGRSLPKCKH FHVECIDMWLSSHSNCPICR PVVR HQ+
Sbjct: 121 NQCKIGLECVICLSLFEENEIGRSLPKCKHVFHVECIDMWLSSHSNCPICRDPVVRTHQS 180

Query: 181 SRNGIGNNLELNENE 192
            RNGIGNNLELNENE
Sbjct: 181 LRNGIGNNLELNENE 195

[Close]
BLAST of ClCG02G019440 vs. NCBI nr
Match: gi|566151503|ref|XP_002298490.2| (hypothetical protein POPTR_0001s28610g, partial [Populus trichocarpa])

HSP 1 Score: 219.9 bits (559), Expect = 3.9e-54
Identity = 109/171 (63.74%), Postives = 131/171 (76.61%), Query Frame = 1 

Query: 7   SSLNFPSFYPFGHAFRTILSYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRS 66
           S++  P   P  H   +I SY+  +MLAA+ISLLLV +FVLLLHIYAKWFL QARH+RRS
Sbjct: 3   SAVESPEHNPMSHLINSISSYDSNIMLAAVISLLLVILFVLLLHIYAKWFLAQARHRRRS 62

Query: 67  S-IAVSQVLGQPRLHHFHSISFDHSTPPAHSPTKGLDASVISAIPLFIYVSENQCKIGLE 126
           S ++VS VL   R HHFH+ + D  T  + SP+KGLD SVIS+IPLF+Y +E +CK GLE
Sbjct: 63  SSVSVSHVLRASRFHHFHNFTVD--TTFSTSPSKGLDRSVISSIPLFVYKAE-ECKQGLE 122

Query: 127 CVICLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVRHQN 177
           CVICLS FEENE+G+SL KC H FHVECIDMWL+SHSNCP+CRAP V   N
Sbjct: 123 CVICLSPFEENEVGKSLTKCGHGFHVECIDMWLNSHSNCPVCRAPAVGDDN 170

[Close]
BLAST of ClCG02G019440 vs. NCBI nr
Match: gi|743835068|ref|XP_011024924.1| (PREDICTED: RING-H2 finger protein ATL63-like [Populus euphratica])

HSP 1 Score: 219.5 bits (558), Expect = 5.1e-54
Identity = 109/171 (63.74%), Postives = 130/171 (76.02%), Query Frame = 1 

Query: 7   SSLNFPSFYPFGHAFRTILSYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRS 66
           S++  P   P  H    I SY+  +MLAA+ISLLLV +FVLLLHIYAKWFL QARH+RRS
Sbjct: 3   SAIESPEHNPMSHLINNISSYDSNIMLAAVISLLLVILFVLLLHIYAKWFLAQARHRRRS 62

Query: 67  S-IAVSQVLGQPRLHHFHSISFDHSTPPAHSPTKGLDASVISAIPLFIYVSENQCKIGLE 126
           S ++VS VL   R HHFH+ + D  T  + SP+KGLD SVIS+IPLF+Y +E +CK GLE
Sbjct: 63  SSVSVSHVLRASRFHHFHNFTVD--TTFSTSPSKGLDGSVISSIPLFVYKAE-ECKQGLE 122

Query: 127 CVICLSLFEENEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAPVVRHQN 177
           CVICLS FEENE+G+SL KC H FHVECIDMWL+SHSNCP+CRAP V   N
Sbjct: 123 CVICLSPFEENEVGKSLIKCGHGFHVECIDMWLNSHSNCPVCRAPAVGDDN 170

[Close]
BLAST of ClCG02G019440 vs. NCBI nr
Match: gi|225434526|ref|XP_002278655.1| (PREDICTED: RING-H2 finger protein ATL63 [Vitis vinifera])

HSP 1 Score: 217.6 bits (553), Expect = 1.9e-53
Identity = 102/155 (65.81%), Postives = 127/155 (81.94%), Query Frame = 1 

Query: 16  PFGHAFRTILSYNGTVMLAALISLLLVTIFVLLLHIYAKWFLTQARHQRRSSIAVSQVLG 75
           PF    +++ SYNG VMLAA++SLLLV +FVL+LHIYAKWFL  ARH+RRSS++VS VL 
Sbjct: 13  PFTDFMKSVFSYNGNVMLAAIVSLLLVILFVLVLHIYAKWFLAHARHRRRSSVSVSHVLR 72

Query: 76  QPRLHHFHSISFDHSTPPAHSPTKGLDASVISAIPLFIYVSENQCKIGLECVICLSLFEE 135
             R HHFH+ +F+  T  + SPTKGLD+S IS+IPLF+Y +E   K GLECVICLS+FE+
Sbjct: 73  PTRFHHFHTFTFE--TTLSGSPTKGLDSSAISSIPLFVYKAEEH-KHGLECVICLSVFED 132

Query: 136 NEIGRSLPKCKHAFHVECIDMWLSSHSNCPICRAP 171
           +++GR+LPKC HAFHV+CIDMWL SHSNCPICRAP
Sbjct: 133 DDVGRNLPKCGHAFHVQCIDMWLHSHSNCPICRAP 164

The following BLAST results are available for this feature:
BLAST of ClCG02G019440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL63_ARATH7.1e-3242.41RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1[more]
ATL2_ARATH3.1e-2740.12RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2[more]
ATL5_ARATH8.4e-2539.04RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1[more]
ATL64_ARATH4.6e-2340.41RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1[more]
ATL17_ARATH5.1e-2237.14RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2 SV=2[more]
BLAST of ClCG02G019440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBL6_CUCSA8.6e-9390.26Uncharacterized protein OS=Cucumis sativus GN=Csa_6G182680 PE=4 SV=1[more]
B9GGQ3_POPTR2.7e-5463.74Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0001s28610g P... [more]
D7SJU6_VITVI1.3e-5365.81Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06930 PE=4 SV=... [more]
B9HND1_POPTR1.6e-5156.99Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0009s07800g P... [more]
V4SCT6_9ROSI2.1e-5155.56Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029990mg PE=4 SV=1[more]
BLAST of ClCG02G019440 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58580.14.0e-3342.41 TOXICOS EN LEVADURA 63[more]
AT3G16720.11.7e-2840.12 TOXICOS EN LEVADURA 2[more]
AT3G62690.14.7e-2639.04 AtL5[more]
AT2G47560.12.6e-2440.41 RING/U-box superfamily protein[more]
AT4G15975.12.9e-2337.68 RING/U-box superfamily protein[more]
BLAST of ClCG02G019440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659130624|ref|XP_008465265.1|1.2e-9590.86PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo][more]
gi|700191861|gb|KGN47065.1|1.2e-9290.26hypothetical protein Csa_6G182680 [Cucumis sativus][more]
gi|566151503|ref|XP_002298490.2|3.9e-5463.74hypothetical protein POPTR_0001s28610g, partial [Populus trichocarpa][more]
gi|743835068|ref|XP_011024924.1|5.1e-5463.74PREDICTED: RING-H2 finger protein ATL63-like [Populus euphratica][more]
gi|225434526|ref|XP_002278655.1|1.9e-5365.81PREDICTED: RING-H2 finger protein ATL63 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050794 regulation of cellular process
biological_process GO:0006002 fructose 6-phosphate metabolic process
biological_process GO:0030100 regulation of endocytosis
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0071470 cellular response to osmotic stress
biological_process GO:0050789 regulation of biological process
biological_process GO:0009987 cellular process
biological_process GO:0006970 response to osmotic stress
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0043609 regulation of carbon utilization
biological_process GO:0006003 fructose 2,6-bisphosphate metabolic process
biological_process GO:0042732 D-xylose metabolic process
biological_process GO:0008150 biological_process
biological_process GO:1901000 regulation of response to salt stress
biological_process GO:0046835 carbohydrate phosphorylation
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0044464 cell part
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005798 Golgi-associated vesicle
cellular_component GO:0005769 early endosome
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0012505 endomembrane system
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0016020 membrane
cellular_component GO:0005768 endosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0003873 6-phosphofructo-2-kinase activity
molecular_function GO:2001070 starch binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G019440.1ClCG02G019440.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 125..168
score: 4.9
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 126..167
score: 3.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 126..168
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 124..171
score: 1.1
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 90..193
score: 7.6E-73coord: 24..70
score: 7.6
NoneNo IPR availablePANTHERPTHR14155:SF135RING-H2 FINGER PROTEIN ATL63coord: 90..193
score: 7.6E-73coord: 24..70
score: 7.6
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 119..175
score: 6.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG02G019440Csa6G182680Cucumber (Chinese Long) v2cuwcgB437
ClCG02G019440MELO3C026831Melon (DHL92) v3.5.1mewcgB001
ClCG02G019440Cla013373Watermelon (97103) v1wcgwmB197
ClCG02G019440Cla004365Watermelon (97103) v1wcgwmB189
ClCG02G019440Cla97C02G045430Watermelon (97103) v2wcgwmbB138
ClCG02G019440Bhi10G000644Wax gourdwcgwgoB298
ClCG02G019440Cucsa.139340Cucumber (Gy14) v1cgywcgB232
ClCG02G019440CmaCh01G006860Cucurbita maxima (Rimu)cmawcgB400
ClCG02G019440CmaCh13G000500Cucurbita maxima (Rimu)cmawcgB189
ClCG02G019440CmaCh02G007360Cucurbita maxima (Rimu)cmawcgB527
ClCG02G019440CmoCh02G007410Cucurbita moschata (Rifu)cmowcgB525
ClCG02G019440CmoCh01G007140Cucurbita moschata (Rifu)cmowcgB398
ClCG02G019440CmoCh13G000410Cucurbita moschata (Rifu)cmowcgB180
ClCG02G019440Lsi10G014440Bottle gourd (USVL1VR-Ls)lsiwcgB054
ClCG02G019440Cp4.1LG20g07950Cucurbita pepo (Zucchini)cpewcgB462
ClCG02G019440MELO3C026831.2Melon (DHL92) v3.6.1medwcgB103
ClCG02G019440CsaV3_6G016070Cucumber (Chinese Long) v3cucwcgB457
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
ClCG02G019440ClCG07G004370Watermelon (Charleston Gray)wcgwcgB135
The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G019440Cucumber (Chinese Long) v3cucwcgB404
ClCG02G019440Watermelon (97103) v2wcgwmbB165
ClCG02G019440Cucurbita maxima (Rimu)cmawcgB481
ClCG02G019440Cucurbita moschata (Rifu)cmowcgB479
ClCG02G019440Wild cucumber (PI 183967)cpiwcgB400
ClCG02G019440Wild cucumber (PI 183967)cpiwcgB458
ClCG02G019440Cucurbita pepo (Zucchini)cpewcgB266
ClCG02G019440Cucurbita pepo (Zucchini)cpewcgB658
ClCG02G019440Cucumber (Gy14) v2cgybwcgB402
ClCG02G019440Silver-seed gourdcarwcgB0327
ClCG02G019440Silver-seed gourdcarwcgB0501