ClCG02G013580 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G013580
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	cDNA clone:J013087A14, full insert sequence
Location	CG_Chr02 : 27597258 .. 27600716 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGCCACCTGAGTGATGTTAAATTTTCAGCGAGTACGAAAAAGCGATTCGCCGCGAAGCCCGAAAAATGGTGAGAATTCACGTCAAGTCCGGCGACGATTCCGGCCAGAACGAGTTTCTATTTGAGTGTCCGAGCGACTCATTGATCGAAGAAATTGCTTCGGAAGTTATTCAAATTTTCAATCTCCAATCTAAAATCCATCGGCTTGTTTCAGTGTTCGAACCCCGTCTACTTCCCTTCCATGGCGATCCCAAAGGTTTGAATATTAGCAATTTCGAATAAATAATTTCTGTTTCACTCGATTCTGTTTCTTTCTCTTCTGTAATCATCTTACGCTCGTCGATTCGATGATGGCTGTGATGTGAAGCTACGCCTCTTTTGAGAGCCTTTTCAGAAGCAAAGTCCTACGCATCTAAGGTCTCTCTCTCTATTCCCATTTTCTTGTTGGCTGAGAAAATCTATGAGAGTTCTGTTCTTTAGTAAACCTAGATTGTGGAGAAGAGTGAATGCCAATTCATTGTAATTCTTTTGCATCTTCTCTTGAATATAACAGTTTATATTTTTCCTAATTAGAACTCTTTTAGCTTTGAGAGTAGATTTTTTCCCCTCTGAAAAGGGAATACTTGAGCTAGACTATTTAGTCTATTCTTTTGCATCTTCTCAATAAATTGATTTTATGTTTAGTTTTTCCCTTATTCGAAATCAATACTTTATTATAGCTTTGCAATTAGAATTGTCTTTTATTAGAGAAGGGAATGTTGTAATATTAGTCTATTCTTTTGCATCTTCTCATTGATTGATTTCAATTTTCTCACTACAGGACATGGTTATCCACAATAGGCCTTTATCCTATCTCGTGTTGAGACTCCATTTTGAGACTATGGAAAGGGAATTGGTAGCGAAGTTTGATTTATTGGGTGTCTCTGATTCCACTCAGTATCAACAACTTTTATCAGGTATTCTAGATTTTCTCCTCTCTCTTTTTGTTTTGCATTTTTCGTAGGTCTTAAAGAACAATAATATTATCAACCATTGCTCTAAAGGTGTATGTTGTACTTCCGTGTTACCCTGATGGTTCAGGATGATACCTTTGTCTTTCATATAATGTTTTTGGTAGGGACGCTATTAGGCGTATATTAGTAATTAGCTAGGAAGTTGGTTCGGGAGATTGGTTATGAATAGCGAGAGTGGTATTCACGATTGACCTGCCCCTAGCCTCTCCAACAAATCTCGAGGAGGAAGTTCCAGTGGGCAGCCACAAGAACCCACAACGAGACTCTGTAGTCCCTTATACAGACAGTTGCCTCCAGTCAAAAGACTTAGAAGGATAGAGATACTGGAAGTATTTTTGAAGTATCTTTTTGGAGACAATATTTATGCGATTCCAAGAAGTGAGACCTGCAACCGTTTGATCGATTGTTAGGTGATCCAAAAGTTGCTGAACTGTGGCCATCCTCCATTGAAGCCGTCTTTTAGTGTCTGAATTGTCTTGAAGAGAAAAAGGTTTGGTGTGCCATTTTTGTGTTGTGTGAAGATGCACTTTTCTAGTGGGAATCTGTTGAAAGGTCTATTGATGTTAGTAATGGACTGTCACTTGGGCTTAGTTCAAGGAGGTATTCTTTAGAAAATAATTCCCTGCTAAAAATGGCACACAAAACCTTATCCTCTTCAAGACAGTTCATGTGCTGAAAAATGGCTTTGATGGATGATAGTCACAGTTCAGCAACTGTTGAGTCACATTGAAATCTCGTAAATATTTTGTCCCCATAGAGATACTTCATGTATCTTGATCCTCCTGAGTTATCTAACTGGTAATGACTATGTACAAGGGATTGCAGAGTCTCCAATAGTAAGAACATTGTGGGTCCTTGCGGCCAAGGTTTAAAATGTCGATGTCGATGGAAATATTGGGGCCTTAATTTTACGGAAATATCGATTTCGATGGATATTTTTGAAAAAATAAAAAACATAAAAAAATTCAAAAAATAAATTTAAATTAGTAAATAAACTTTTTATGATTTTTAAAAGTCTATTATTTATATTATGTTTACATTAGTAACATTTTGTTGTTTGGTTATGTTTCGTGGTTTTTTCTACGATACAATGGAAATTTGGATTCACCTTTCATGTCAATGTCGAACTCATAGAAACATGGAAATATCGGCATGTCAATGGAAATTTAATACTATGCTTGCGGCTGCCCCATTGGAACAATGCTACTTTTCAAGACCTTTATCGAGGGTCGTCACTACATGCTTAACTATTCTAATAAAACTTAGAGGTTAAATTAGCTTCACTTTAGAAGAAGATGGCGTAAAAATGTATATATAGGCTACCTTTAAGCAAAATGTCAAAAAACAGGAGCCCAAATTATTGTGGTGTTTATTGCTGCTTGTTTTTGGTTCATGCACACTTGAAATATAAACTTTTGTGTTATGCATGTTAACACGAAGAGTATCTGGTCTGGTTCACTCAAATTCCCCAGTAAGGAACAATATTAAGTTTCAAGGAAAAATTACGTCAAATGAAGTTTCTACGGAAAGACCTCTCTTGAAACTATCTTCTCCAATGCTCGATAGAACTCAAATATATTGAACTATATAAGATTACAGAATTACGGTAATTGGAATCTTCCCTCTCTTGAGATGCCACTCAGCCTCAAAACTGTTTACTTTACCTCCATTCCTTCCCCCTCACTCTATTTATATGCAACAATTTCCCACCAACTCCTTTGCTAAATACTAATATATCCTTAATATACCTTATAGTTTTCCCACTTCTATCCAAATAACTTTCCTATCTACTCTTTGATAAGGTTATACTGTGATGAAGAAGAGATCCATTAACACATCGTTTTCAATAATCGTTTTGAACTGTTACTCAGAAAACAAATAGCTTTGTTTTAGATCAATCTTATAATTCTTGATGAAGGTGAGTAACTAGAAACGAGATTGTCTATTATCTCACCATTCAGATGTGGGGCTTCTTGACGAGGATACAACACAGCTAAAATTAGCAGGAAAAGAGCTTACAAGGGAGAAACAACTTTGTGACTATATTGGAAGAAATGAGAAAACTAAGGTATTTCGTCATTAAATTGTTTCCTTCATTTGTTTTCTTCCTATAGACGACCAATTTCTCCAATTATCTATCAGATCGTTCTTAAACTACAACCAGAAATCACACCCCCGAGTTGAATACTGATATCGACTAACAAGTGGAACGTGCTTGATGACGTTCTGTGAAACCTGGTCAAGTTCAAATTCCTGTTATTATGTGAAACTTTTGGGCTTTGATGCTCATGGGATATGGAAAAGTGGACAAGATTTTGGATGGGAGAAAGTAGATAAGATGTAAATATTTTTGTTTGCTGACTGATATTTTGTATCATATATCAGATGGATTTTGAATATGCTTAATCCTTACATCATGAGCTTCAAAAGTTGTGTTTGGTTG

mRNA sequence

ATTTTGCCACCTGAGTGATGTTAAATTTTCAGCGAGTACGAAAAAGCGATTCGCCGCGAAGCCCGAAAAATGGTGAGAATTCACGTCAAGTCCGGCGACGATTCCGGCCAGAACGAGTTTCTATTTGAGTGTCCGAGCGACTCATTGATCGAAGAAATTGCTTCGGAAGTTATTCAAATTTTCAATCTCCAATCTAAAATCCATCGGCTTGTTTCAGTGTTCGAACCCCGTCTACTTCCCTTCCATGGCGATCCCAAAGCTACGCCTCTTTTGAGAGCCTTTTCAGAAGCAAAGTCCTACGCATCTAAGGACATGGTTATCCACAATAGGCCTTTATCCTATCTCGTGTTGAGACTCCATTTTGAGACTATGGAAAGGGAATTGGTAGCGAAGTTTGATTTATTGGGTGTCTCTGATTCCACTCAGTATCAACAACTTTTATCAGATGTGGGGCTTCTTGACGAGGATACAACACAGCTAAAATTAGCAGGAAAAGAGCTTACAAGGGAGAAACAACTTTGTGACTATATTGGAAGAAATGAGAAAACTAAGATCGTTCTTAAACTACAACCAGAAATCACACCCCCGAGTTGAATACTGATATCGACTAACAAGTGGAACGTGCTTGATGACGTTCTGTGAAACCTGGTCAAGTTCAAATTCCTGTTATTATGTGAAACTTTTGGGCTTTGATGCTCATGGGATATGGAAAAGTGGACAAGATTTTGGATGGGAGAAAGTAGATAAGATGTAAATATTTTTGTTTGCTGACTGATATTTTGTATCATATATCAGATGGATTTTGAATATGCTTAATCCTTACATCATGAGCTTCAAAAGTTGTGTTTGGTTG

Coding sequence (CDS)

ATGGTGAGAATTCACGTCAAGTCCGGCGACGATTCCGGCCAGAACGAGTTTCTATTTGAGTGTCCGAGCGACTCATTGATCGAAGAAATTGCTTCGGAAGTTATTCAAATTTTCAATCTCCAATCTAAAATCCATCGGCTTGTTTCAGTGTTCGAACCCCGTCTACTTCCCTTCCATGGCGATCCCAAAGCTACGCCTCTTTTGAGAGCCTTTTCAGAAGCAAAGTCCTACGCATCTAAGGACATGGTTATCCACAATAGGCCTTTATCCTATCTCGTGTTGAGACTCCATTTTGAGACTATGGAAAGGGAATTGGTAGCGAAGTTTGATTTATTGGGTGTCTCTGATTCCACTCAGTATCAACAACTTTTATCAGATGTGGGGCTTCTTGACGAGGATACAACACAGCTAAAATTAGCAGGAAAAGAGCTTACAAGGGAGAAACAACTTTGTGACTATATTGGAAGAAATGAGAAAACTAAGATCGTTCTTAAACTACAACCAGAAATCACACCCCCGAGTTGA

Protein sequence

MVRIHVKSGDDSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPFHGDPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDSTQYQQLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITPPS

Homology

[Close]

BLAST of ClCG02G013580 vs. TrEMBL
Match: A0A0A0KS44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G177690 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 4.4e-77
Identity = 150/174 (86.21%), Postives = 161/174 (92.53%), Query Frame = 1


Query: 1   MVRIHVKSGDDSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPFHG 60
           MVR+HVKSG DS + EFL+EC SD LI+EIASEVIQIFNLQSKIHRL+S FEP LLPF G
Sbjct: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60

Query: 61  DPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDSTQY 120
           DPKAT LLRAFSEAKSYASKDMVIHNRPLS+LVLR HFET+ERELVAKFD+LGV DSTQY
Sbjct: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120

Query: 121 QQLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITPPS 175
           QQL SDVGLLD+DTTQLKLAGKEL +EKQLCDYIGRNEKTKIVLKLQP+ITPPS
Sbjct: 121 QQLSSDVGLLDKDTTQLKLAGKELMKEKQLCDYIGRNEKTKIVLKLQPKITPPS 174

[Close]

BLAST of ClCG02G013580 vs. TrEMBL
Match: M1C5V7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400023509 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.5e-43
Identity = 96/176 (54.55%), Postives = 123/176 (69.89%), Query Frame = 1


Query: 1   MVRIHVKSGD--DSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPF 60
           MVR+HVK GD    G  EFL++  + S I+EIA E+I+I N QSKI       E  L   
Sbjct: 29  MVRVHVKHGDGGSDGAGEFLYDTETTSTIDEIAKEIIEIANFQSKIQCFAVELESHLSKL 88

Query: 61  HGDPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDST 120
            GDPK  PL+RA SEA SYASKD VIHN+PLS  VLR H  ++E+E +  + ++G+S S+
Sbjct: 89  QGDPKVMPLVRALSEATSYASKDQVIHNKPLSLYVLRDHTRSIEKEFLVTYSVMGLS-SS 148

Query: 121 QYQQLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITPPS 175
             QQ LSD+ +L+E+T QL  AGKELTR K+LCD+IGRNEKTKIV++LQ  I PP+
Sbjct: 149 DLQQFLSDLQILEENTVQLLWAGKELTRGKKLCDFIGRNEKTKIVIRLQSPIPPPA 203

[Close]

BLAST of ClCG02G013580 vs. TrEMBL
Match: K4C2G1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.7e-42
Identity = 97/175 (55.43%), Postives = 122/175 (69.71%), Query Frame = 1


Query: 1   MVRIHVKSGDDS-GQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPFH 60
           MVRIHVK G  S G  EFL++  + S I+EIA ++I+I NLQSKI      FE  L    
Sbjct: 1   MVRIHVKHGGGSDGDGEFLYDTETSSTIDEIAKDIIEIANLQSKIQCFAVEFESHLSKLQ 60

Query: 61  GDPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDSTQ 120
           GDPK   L+RA SEA SYASKD VIHN+PLS  VLR H   +E+E +    ++G+S S+ 
Sbjct: 61  GDPKVMSLVRALSEATSYASKDQVIHNKPLSLYVLRNHTRNIEKEYLVTHSVMGLS-SSN 120

Query: 121 YQQLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITPPS 175
            QQ LSD+ +L+E+T QL  AGKELTR K+LCD+IGRNEKTKIV++LQ  I PP+
Sbjct: 121 LQQFLSDLQILEENTVQLLWAGKELTRGKKLCDFIGRNEKTKIVIRLQSPIPPPA 174

[Close]

BLAST of ClCG02G013580 vs. TrEMBL
Match: A0A0V0HLT5_SOLCH (Putative UPF0769 protein C21orf59-like (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.8e-41
Identity = 93/174 (53.45%), Postives = 122/174 (70.11%), Query Frame = 1


Query: 3   RIHVK--SGDDSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPFHG 62
           R+HVK  +G   G  EFL++  + S I+EIA ++I+I N QSKI      FEP L    G
Sbjct: 1   RVHVKHGAGGSDGAGEFLYDTETTSKIDEIAKDIIEIANFQSKIQCFAVEFEPHLSKLQG 60

Query: 63  DPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDSTQY 122
           DPKA PL+RA SEA SYASKD V HN+PLS  VLR H  ++E+E +  + ++G+S+S   
Sbjct: 61  DPKAMPLVRALSEATSYASKDQVKHNKPLSLYVLRDHTRSIEKEFLVTYSVMGLSNS-DL 120

Query: 123 QQLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITPPS 175
           QQ LSD+ +L+ +T QL  AGKELTR K+LCD+IGRNEKTKIV++LQ  I PP+
Sbjct: 121 QQFLSDLQILEXNTVQLLWAGKELTRGKKLCDFIGRNEKTKIVIRLQSPIPPPA 173

[Close]

BLAST of ClCG02G013580 vs. TrEMBL
Match: B9SLC4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0626460 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.9e-41
Identity = 92/174 (52.87%), Postives = 122/174 (70.11%), Query Frame = 1


Query: 1   MVRIHVKSGDDSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPFHG 60
           MVRI VK GD     EFL+EC +   I+EIA E+IQI NLQ KI  L+   EP L PF  
Sbjct: 1   MVRIQVKHGD----REFLYECQNTCQIDEIAPELIQISNLQYKIDHLLLRLEPLLSPFLK 60

Query: 61  DPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDSTQY 120
           +PK  PL+RA SEA+SYASKD V++N+ +S+ V+R + + +ER+++  + LLG  D+ Q 
Sbjct: 61  NPKVIPLIRALSEAQSYASKDQVLYNKAISFYVMRDYVQAIERQVMQNYQLLGFEDANQV 120

Query: 121 QQLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITPPS 175
           QQLL+DV +L   +T+L  AGKEL R+K+LCDYIG NEKTK VL+LQP    P+
Sbjct: 121 QQLLADVEVLQAQSTELHWAGKELVRDKRLCDYIGMNEKTKFVLRLQPHNPNPA 170

[Close]

BLAST of ClCG02G013580 vs. NCBI nr
Match: gi|659123336|ref|XP_008461611.1| (PREDICTED: UPF0769 protein C21orf59 homolog [Cucumis melo])

HSP 1 Score: 298.9 bits (764), Expect = 5.8e-78
Identity = 150/172 (87.21%), Postives = 161/172 (93.60%), Query Frame = 1


Query: 2   VRIHVKSGDDSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPFHGD 61
           +R+HVKSGDDS QNEFL+EC SDSLIEEIASEVIQIFNLQSKIHRL+S FEPRLLPF GD
Sbjct: 1   MRLHVKSGDDSCQNEFLYECHSDSLIEEIASEVIQIFNLQSKIHRLISEFEPRLLPFSGD 60

Query: 62  PKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDSTQYQ 121
           PKATPLLRAFSEAKSYASKDM+IHNRPLS+LVLR HFET+ERELVA FD LGV DSTQYQ
Sbjct: 61  PKATPLLRAFSEAKSYASKDMIIHNRPLSFLVLRHHFETIERELVANFDTLGVYDSTQYQ 120

Query: 122 QLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITPP 174
           QLLSDV LLD++TTQLKLAGKEL +EKQLCDYIGRNEKTKIVLKLQP+ TPP
Sbjct: 121 QLLSDVRLLDKETTQLKLAGKELMKEKQLCDYIGRNEKTKIVLKLQPKTTPP 172

[Close]

BLAST of ClCG02G013580 vs. NCBI nr
Match: gi|449451677|ref|XP_004143588.1| (PREDICTED: UPF0769 protein C21orf59 homolog [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 6.4e-77
Identity = 150/174 (86.21%), Postives = 161/174 (92.53%), Query Frame = 1


Query: 1   MVRIHVKSGDDSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPFHG 60
           MVR+HVKSG DS + EFL+EC SD LI+EIASEVIQIFNLQSKIHRL+S FEP LLPF G
Sbjct: 1   MVRVHVKSGHDSCEFEFLYECQSDLLIDEIASEVIQIFNLQSKIHRLISEFEPLLLPFSG 60

Query: 61  DPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDSTQY 120
           DPKAT LLRAFSEAKSYASKDMVIHNRPLS+LVLR HFET+ERELVAKFD+LGV DSTQY
Sbjct: 61  DPKATSLLRAFSEAKSYASKDMVIHNRPLSFLVLRHHFETIERELVAKFDILGVYDSTQY 120

Query: 121 QQLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITPPS 175
           QQL SDVGLLD+DTTQLKLAGKEL +EKQLCDYIGRNEKTKIVLKLQP+ITPPS
Sbjct: 121 QQLSSDVGLLDKDTTQLKLAGKELMKEKQLCDYIGRNEKTKIVLKLQPKITPPS 174

[Close]

BLAST of ClCG02G013580 vs. NCBI nr
Match: gi|697183923|ref|XP_009600983.1| (PREDICTED: UPF0769 protein C21orf59 homolog isoform X1 [Nicotiana tomentosiformis])

HSP 1 Score: 183.7 bits (465), Expect = 2.7e-43
Identity = 97/174 (55.75%), Postives = 123/174 (70.69%), Query Frame = 1


Query: 1   MVRIHVK--SGDDSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPF 60
           MVR+HVK   GD  G  EFL+   + S + EIA ++ +I NLQ KI  L   FEP L   
Sbjct: 1   MVRVHVKYGDGDGDGDGEFLYNTETTSTVVEIAKDITEIANLQLKIQYLALKFEPYLSKH 60

Query: 61  HGDPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDST 120
            GDPK  PL+RAFSEA SYASKD VIHN+PLS  VLR H  ++E+E +  + ++G+S S+
Sbjct: 61  QGDPKVMPLVRAFSEATSYASKDQVIHNKPLSLYVLRDHTRSIEKEFLVTYSVMGLS-SS 120

Query: 121 QYQQLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITP 173
             Q+ LSD+ LL+E+T QL  AGKELTR K+LCD+IG+NEKTKIV+KLQP I P
Sbjct: 121 DLQKFLSDLQLLEENTLQLLWAGKELTRGKKLCDFIGKNEKTKIVIKLQPHIPP 173

[Close]

BLAST of ClCG02G013580 vs. NCBI nr
Match: gi|697183925|ref|XP_009600984.1| (PREDICTED: UPF0769 protein C21orf59 homolog isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 183.7 bits (465), Expect = 2.7e-43
Identity = 97/174 (55.75%), Postives = 123/174 (70.69%), Query Frame = 1


Query: 1   MVRIHVK--SGDDSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPF 60
           MVR+HVK   GD  G  EFL+   + S + EIA ++ +I NLQ KI  L   FEP L   
Sbjct: 1   MVRVHVKYGDGDGDGDGEFLYNTETTSTVVEIAKDITEIANLQLKIQYLALKFEPYLSKH 60

Query: 61  HGDPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDST 120
            GDPK  PL+RAFSEA SYASKD VIHN+PLS  VLR H  ++E+E +  + ++G+S S+
Sbjct: 61  QGDPKVMPLVRAFSEATSYASKDQVIHNKPLSLYVLRDHTRSIEKEFLVTYSVMGLS-SS 120

Query: 121 QYQQLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITP 173
             Q+ LSD+ LL+E+T QL  AGKELTR K+LCD+IG+NEKTKIV+KLQP I P
Sbjct: 121 DLQKFLSDLQLLEENTLQLLWAGKELTRGKKLCDFIGKNEKTKIVIKLQPHIPP 173

[Close]

BLAST of ClCG02G013580 vs. NCBI nr
Match: gi|698537518|ref|XP_009764848.1| (PREDICTED: UPF0769 protein C21orf59 homolog [Nicotiana sylvestris])

HSP 1 Score: 183.3 bits (464), Expect = 3.5e-43
Identity = 94/174 (54.02%), Postives = 123/174 (70.69%), Query Frame = 1


Query: 1   MVRIHVKSGDDSGQNEFLFECPSDSLIEEIASEVIQIFNLQSKIHRLVSVFEPRLLPFHG 60
           MVR+HVK GD  G  EFL++  + S ++EIA ++ +I NLQ KI  L   F+P L    G
Sbjct: 1   MVRVHVKYGDGDGDGEFLYDTETTSTVDEIAKDITEIANLQLKIQYLALKFQPYLSKLQG 60

Query: 61  DPKATPLLRAFSEAKSYASKDMVIHNRPLSYLVLRLHFETMERELVAKFDLLGVSDSTQY 120
           DPK  PL+RA SEA SYASKD VIHN+PLS  VLR H  ++E+E +    ++G+S S+  
Sbjct: 61  DPKVMPLVRALSEATSYASKDQVIHNKPLSLYVLRDHTRSIEKEFLVTCRVIGLS-SSDL 120

Query: 121 QQLLSDVGLLDEDTTQLKLAGKELTREKQLCDYIGRNEKTKIVLKLQPEITPPS 175
           QQ LS + L +E+T QL  AGKELTR K+LCD+IGRNEKTKI++KLQP + PP+
Sbjct: 121 QQFLSGLQLHEENTLQLLWAGKELTRGKKLCDFIGRNEKTKILIKLQPHVPPPA 173

The following BLAST results are available for this feature:

BLAST of ClCG02G013580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS44_CUCSA	4.4e-77	86.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G177690 PE=4 SV=1	[more]
M1C5V7_SOLTU	5.5e-43	54.55	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400023509 PE=4 SV=1	[more]
K4C2G1_SOLLC	2.7e-42	55.43	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A0V0HLT5_SOLCH	1.8e-41	53.45	Putative UPF0769 protein C21orf59-like (Fragment) OS=Solanum chacoense PE=4 SV=1	[more]
B9SLC4_RICCO	3.9e-41	52.87	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0626460 PE=4 SV=1	[more]

BLAST of ClCG02G013580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123336\|ref\|XP_008461611.1\|	5.8e-78	87.21	PREDICTED: UPF0769 protein C21orf59 homolog [Cucumis melo]	[more]
gi\|449451677\|ref\|XP_004143588.1\|	6.4e-77	86.21	PREDICTED: UPF0769 protein C21orf59 homolog [Cucumis sativus]	[more]
gi\|697183923\|ref\|XP_009600983.1\|	2.7e-43	55.75	PREDICTED: UPF0769 protein C21orf59 homolog isoform X1 [Nicotiana tomentosiformi...	[more]
gi\|697183925\|ref\|XP_009600984.1\|	2.7e-43	55.75	PREDICTED: UPF0769 protein C21orf59 homolog isoform X2 [Nicotiana tomentosiformi...	[more]
gi\|698537518\|ref\|XP_009764848.1\|	3.5e-43	54.02	PREDICTED: UPF0769 protein C21orf59 homolog [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021298	DUF2870

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G013580.1	ClCG02G013580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021298	Protein of unknown function DUF2870	PFAM	PF11069	DUF2870	coord: 136..169 score: 1.8
None	No IPR available	PANTHER	PTHR13238	PROTEIN C21ORF59	coord: 2..173 score: 7.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G013580	Csa5G177690	Cucumber (Chinese Long) v2	cuwcgB380
ClCG02G013580	Cla020104	Watermelon (97103) v1	wcgwmB197
ClCG02G013580	Cla97C02G039230	Watermelon (97103) v2	wcgwmbB138
ClCG02G013580	Bhi07G000845	Wax gourd	wcgwgoB319
ClCG02G013580	CSPI05G09180	Wild cucumber (PI 183967)	cpiwcgB398
ClCG02G013580	Cucsa.165720	Cucumber (Gy14) v1	cgywcgB290
ClCG02G013580	CmaCh04G012190	Cucurbita maxima (Rimu)	cmawcgB641
ClCG02G013580	CmoCh04G012920	Cucurbita moschata (Rifu)	cmowcgB643
ClCG02G013580	Cp4.1LG01g10420	Cucurbita pepo (Zucchini)	cpewcgB376
ClCG02G013580	Carg26898	Silver-seed gourd	carwcgB0721
ClCG02G013580	CsaV3_5G006590	Cucumber (Chinese Long) v3	cucwcgB402

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G013580	Watermelon (97103) v2	wcgwmbB134
ClCG02G013580	Watermelon (97103) v2	wcgwmbB158
ClCG02G013580	Wax gourd	wcgwgoB258
ClCG02G013580	Wax gourd	wcgwgoB312
ClCG02G013580	Watermelon (Charleston Gray)	wcgwcgB048
ClCG02G013580	Cucumber (Gy14) v1	cgywcgB527
ClCG02G013580	Cucurbita maxima (Rimu)	cmawcgB642
ClCG02G013580	Cucurbita moschata (Rifu)	cmowcgB644
ClCG02G013580	Wild cucumber (PI 183967)	cpiwcgB216
ClCG02G013580	Wild cucumber (PI 183967)	cpiwcgB305
ClCG02G013580	Melon (DHL92) v3.5.1	mewcgB056
ClCG02G013580	Watermelon (97103) v1	wcgwmB177
ClCG02G013580	Cucurbita pepo (Zucchini)	cpewcgB377
ClCG02G013580	Bottle gourd (USVL1VR-Ls)	lsiwcgB236
ClCG02G013580	Bottle gourd (USVL1VR-Ls)	lsiwcgB275
ClCG02G013580	Cucumber (Gy14) v2	cgybwcgB196
ClCG02G013580	Cucumber (Gy14) v2	cgybwcgB347
ClCG02G013580	Melon (DHL92) v3.6.1	medwcgB055
ClCG02G013580	Melon (DHL92) v3.6.1	medwcgB321
ClCG02G013580	Silver-seed gourd	carwcgB0838
ClCG02G013580	Cucumber (Chinese Long) v3	cucwcgB217
ClCG02G013580	Cucumber (Chinese Long) v3	cucwcgB307