ClCG02G012910 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGTATTCGTACTTGTAGCTCTCCTCCTTACCCACCTTGTGTAAGTGATGGTTGCATGGATCCTCAATGTTGCGGTTAGAGCCTTTATCCCTCTTTTAATCAAAATTCGTTCCACCTCTAATTTTCTTATTAGATGAGATAATATTACATTTTAAGCAATTGTTTAAATTAGAATACAAATTATGAATATGGTACGAAAAATATCAAATACAGTTATATATGTGTTTATATTGAATCTCTTGTTTTTTAAATTGTCCATCAAATTGGAGGAATAATTACTAACGTTGAGTTTTGTAGATGCAGGAGGGAATTTTAGATGGCCTAAACTAGTAGGTAAGAAGGGAGATTATGCTAAAAGTGAAATAGAAAAGGATGTGCGTTGTGTGAGGGTTGTAATTTTAAGACAAGGCACGGTTAGAATTGAAAATTTCTGTTGCAATCGTGTTTTTGTTTACGTGGATGATAGTGGCCACGTGGTTGATGTCCCAACCATTGGTTGA ATGGCAGGTATTCGTACTTGTAGCTCTCCTCCTTACCCACCTTGTGTAAGTGATGGTTGCATGGATCCTCAATGTTGCGATGCAGGAGGGAATTTTAGATGGCCTAAACTAGTAGGTAAGAAGGGAGATTATGCTAAAAGTGAAATAGAAAAGGATGTGCGTTGTGTGAGGGTTGTAATTTTAAGACAAGGCACGGTTAGAATTGAAAATTTCTGTTGCAATCGTGTTTTTGTTTACGTGGATGATAGTGGCCACGTGGTTGATGTCCCAACCATTGGTTGA ATGGCAGGTATTCGTACTTGTAGCTCTCCTCCTTACCCACCTTGTGTAAGTGATGGTTGCATGGATCCTCAATGTTGCGATGCAGGAGGGAATTTTAGATGGCCTAAACTAGTAGGTAAGAAGGGAGATTATGCTAAAAGTGAAATAGAAAAGGATGTGCGTTGTGTGAGGGTTGTAATTTTAAGACAAGGCACGGTTAGAATTGAAAATTTCTGTTGCAATCGTGTTTTTGTTTACGTGGATGATAGTGGCCACGTGGTTGATGTCCCAACCATTGGTTGA MAGIRTCSSPPYPPCVSDGCMDPQCCDAGGNFRWPKLVGKKGDYAKSEIEKDVRCVRVVILRQGTVRIENFCCNRVFVYVDDSGHVVDVPTIG
BLAST of ClCG02G012910 vs. Swiss-Prot
Match: ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.4e-08 Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 1
BLAST of ClCG02G012910 vs. Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 8.3e-07 Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 1
BLAST of ClCG02G012910 vs. Swiss-Prot
Match: BGIA_MOMCH (Glu S.griseus protease inhibitor OS=Momordica charantia PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 9.1e-06 Identity = 28/64 (43.75%), Postives = 36/64 (56.25%), Query Frame = 1
BLAST of ClCG02G012910 vs. TrEMBL
Match: V4NI49_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011055mg PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-20 Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 1
BLAST of ClCG02G012910 vs. TrEMBL
Match: Q9STF8_ARATH (PR-6 proteinase inhibitor family protein OS=Arabidopsis thaliana GN=T6H20.110 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.5e-20 Identity = 46/82 (56.10%), Postives = 55/82 (67.07%), Query Frame = 1
BLAST of ClCG02G012910 vs. TrEMBL
Match: A0MF11_ARATH (Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 8.6e-19 Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 1
BLAST of ClCG02G012910 vs. TrEMBL
Match: R0G9B1_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10015502mg PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-17 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 1
BLAST of ClCG02G012910 vs. TrEMBL
Match: A0A0A0LJT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287050 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 3.6e-17 Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 1
BLAST of ClCG02G012910 vs. TAIR10
Match: AT3G46860.1 (AT3G46860.1 Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 105.5 bits (262), Expect = 1.8e-23 Identity = 46/82 (56.10%), Postives = 53/82 (64.63%), Query Frame = 1
BLAST of ClCG02G012910 vs. TAIR10
Match: AT5G43580.1 (AT5G43580.1 Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 64.7 bits (156), Expect = 3.4e-11 Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 1
BLAST of ClCG02G012910 vs. TAIR10
Match: AT2G38900.2 (AT2G38900.2 Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06 Identity = 26/64 (40.62%), Postives = 34/64 (53.12%), Query Frame = 1
BLAST of ClCG02G012910 vs. TAIR10
Match: AT2G38870.1 (AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 46.6 bits (109), Expect = 9.7e-06 Identity = 23/60 (38.33%), Postives = 31/60 (51.67%), Query Frame = 1
BLAST of ClCG02G012910 vs. NCBI nr
Match: gi|567189624|ref|XP_006404448.1| (hypothetical protein EUTSA_v10011055mg [Eutrema salsugineum]) HSP 1 Score: 107.1 bits (266), Expect = 1.7e-20 Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 1
BLAST of ClCG02G012910 vs. NCBI nr
Match: gi|15232657|ref|NP_190270.1| (PR-6 proteinase inhibitor family protein [Arabidopsis thaliana]) HSP 1 Score: 105.5 bits (262), Expect = 5.0e-20 Identity = 46/82 (56.10%), Postives = 55/82 (67.07%), Query Frame = 1
BLAST of ClCG02G012910 vs. NCBI nr
Match: gi|116831272|gb|ABK28590.1| (unknown [Arabidopsis thaliana]) HSP 1 Score: 100.9 bits (250), Expect = 1.2e-18 Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 1
BLAST of ClCG02G012910 vs. NCBI nr
Match: gi|565483408|ref|XP_006299344.1| (hypothetical protein CARUB_v10015502mg [Capsella rubella]) HSP 1 Score: 96.7 bits (239), Expect = 2.3e-17 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 1
BLAST of ClCG02G012910 vs. NCBI nr
Match: gi|700206904|gb|KGN62023.1| (hypothetical protein Csa_2G287050 [Cucumis sativus]) HSP 1 Score: 95.5 bits (236), Expect = 5.2e-17 Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |