ClCG02G003370 (gene) Watermelon (Charleston Gray)

Overview
NameClCG02G003370
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Description40S ribosomal protein S11, putative
LocationCG_Chr02 : 3304883 .. 3307455 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCGAAGCAGGTTTAGGGTTTCAGTAATCGAACTCCTCTCCTTCGGCCGCCTGAGCAAAGACCAGAACGCGTGCTCTCTTCAGAATCCCTATTCATGGCGGAACAGGTTTCTATTCAATCGCCAACATTCACTTCTGTTCCCGTCTATTATGTTTGTTTCATTTTATTCACTTTAACGTTCTATCTCCCAACTCTTCATTCTTTTTCTACAGACCGAGAAGGCGTTTTTGAAGCAACCCAAAGTGTTTCTCTGGTAAGCCCGCCCAATTGAAATATTATTTTGTTGTCAGTTTTAGATTGACATTTATTTAGGTTCTTATTTCTTGAACTGTTGTTCTTATTTGCTGTAATCCTGATTTTATTTTCTGATTTTGATTATTGTTCTTTTTTGGATAAAAAAATAGCTCTAAAAAGGCTGGGAAAGGGACGAGACCTGGAAAGGGTGGGAACCGTTTCTGGAAGAGTATTGGATTAGGATTCAAGACGCCAAGAGAAGCCATTGAAGGTTCGGTTTTTTTACAACTCTGATCACTTTGTGTTTGTTGGATTGTTAATATGAATGTGTTTAGCCCTTAATTAATTCTTAATTTTATATAGCGCTTAATTAATTCTTATAACATGATGAATGCTATTTAAATCAGCAGTCTTGTTGGAATGCTTATTTAAGTGCTATTTTGTTCCAATGCTGAAAGCATATAATTCTGTTAAAGAATATATTGGAAAAACAGTATGAGTTGAAGGGATAGTTGTGTTGAGGGTTTTATTACATTTTATTTAAAATGGGTCTATGTTTCTGCATAGATACAATGGCGTTTCCTACTTGATGGATGGTTGAGGGAGTTTGCAAAATAAAGGGCTTATGTTGATGGAATGATGCTTATCTTAGTAGACTCTCCAACTAATTATGCATCATATAAAGGAATCGTCATGACATCTCATTTATTGAGAGATTAAGATTGAATGCGGAAATGCTAATACCCCGTATCCCCTCTCTAGGCTTGGTCCCGTCACTTATCCTGTGTACTTTATGCATCCTGGCTTACCTTGCTATCATGTTCTTTGAATTGTTGCTGTGAATAAGGATGCATCCTGTAAATGGGAATTTCTGAGCAATACAGCAATCCTCATTTACCCTATGTAGTTGTGTTGAGGGTTTTATTACATTTTATTTAAAATGGGTCTATGTTTCTGCATAGATACAATGGCGTTTCCTACTTGATGGATGGTTGAGGGAGTTTGCAAAATAAAGGGCTTATGTTGATGGAATGATGCTTATCTTAGTAGACTCTCCAACTAATTATGCATCATATAAAGGAATCGTCATGACATCTCATTTATTGAGAGATTAAGATTGAATGCGGAAATGCTAATACCCCGTATCCCCTTTCTAGGCTTGGTCCCGTCACTTATCCTGTGTACTTTATGCATCCTGGCTTACCTTGCTATCATGTTCTTTGAATTGTTGCTGTGAATAAGGATGCATCCTGTAAATGGGAATTTCTGAGCAATACAGCAATCCTCATTTACCCTATGTATTGTATGCATCTTTATCTCTACATTTCTAAGGCATAATATTTAGGCATATTTTGCTGTTTTCTTATGTTCTTTTGAATTGTTGCTGAATATTAGAATGCTATTTACTTAATGATTATTTGAATTCTGCTATATTTGTACAGGAACATATATTGATAAGAAATGCCCCTTCACTGGAACTGTCTCGGTCAGGGGACGTATTTTAGCTGGAACTTGTCATAGTGCTAAGATGGTTAGGACCATAATTGTCAGGAGGAACTACTTACATTATGTTAAGAAGTATCAGAGGTACTTTCCTGAGCCCCCCACCCCCACCCGAGCTGCTCTTTTTTCTTTGTGGTTCAATATATTTTGTTTCTTCTGTTGTTATCCAAAAAATATATTTTGTTTCTTCTGTCTCCTTCAGGTATGAGAAAAGGCACTCCAACATTCCTGCTCACATATCTCCTTGCTTTCGTGTGAAGGAGGGAGATCATGTTATTATTGGCCAATGCAGGTACATAAAGATTCGAGGAATTCTTTCCATTGGTTGTTTTTGTTGTATGTTTTCTTTTGAAGAGAACTTGTTGAACATTTACTGTTTGAATTTCAGGCCATTGTCGAAGACAGTGAGGTTCAATGTGTTGAAGGTCATTCCTGCTGGATCCTCAAGTCGTGGGAAGAAGGCTTTTGCCGGAATTTAAATTATGTAGGTTTCCGCTTTTGATACAAAAAAACAGCATGAAAGAACTTTTGCGAGTTGTAGGCCATATTTGATGGATGCAAAAAGGTTTTGATGACTTGGCAGTCTGGATTTTGATATGAATATGGACTGTTTTATTGTGTTCTATTTGTTTTGATTTCTTGGGGTTTTGAAGGCACCAACTTTTCCTGGATCTCTATTAGGTATTCTAATACATGTCAGTTTTTTATTATGAGATATTTGTTCCACCGCGGTCGAGCTGGTTTTCGACAGAATCCTCTTAGAGTTAAATTAGTGATTGTAAAGTGTCATTGTGAGATCTGGTTTATGCATGCATATAAACTTTTTCGTTCCTTG

mRNA sequence

CTCCGAAGCAGGTTTAGGGTTTCAGTAATCGAACTCCTCTCCTTCGGCCGCCTGAGCAAAGACCAGAACGCGTGCTCTCTTCAGAATCCCTATTCATGGCGGAACAGACCGAGAAGGCGTTTTTGAAGCAACCCAAAGTGTTTCTCTGCTCTAAAAAGGCTGGGAAAGGGACGAGACCTGGAAAGGGTGGGAACCGTTTCTGGAAGAGTATTGGATTAGGATTCAAGACGCCAAGAGAAGCCATTGAAGGAACATATATTGATAAGAAATGCCCCTTCACTGGAACTGTCTCGGTCAGGGGACGTATTTTAGCTGGAACTTGTCATAGTGCTAAGATGGTTAGGACCATAATTGTCAGGAGGAACTACTTACATTATGTTAAGAAGTATCAGAGGTATGAGAAAAGGCACTCCAACATTCCTGCTCACATATCTCCTTGCTTTCGTGTGAAGGAGGGAGATCATGTTATTATTGGCCAATGCAGGCCATTGTCGAAGACAGTGAGGTTCAATGTGTTGAAGGTCATTCCTGCTGGATCCTCAAGTCGTGGGAAGAAGGCTTTTGCCGGAATTTAAATTATGTAGGTTTCCGCTTTTGATACAAAAAAACAGCATGAAAGAACTTTTGCGAGTTGTAGGCCATATTTGATGGATGCAAAAAGGTTTTGATGACTTGGCAGTCTGGATTTTGATATGAATATGGACTGTTTTATTGTGTTCTATTTGTTTTGATTTCTTGGGGTTTTGAAGGCACCAACTTTTCCTGGATCTCTATTAGGTATTCTAATACATGTCAGTTTTTTATTATGAGATATTTGTTCCACCGCGGTCGAGCTGGTTTTCGACAGAATCCTCTTAGAGTTAAATTAGTGATTGTAAAGTGTCATTGTGAGATCTGGTTTATGCATGCATATAAACTTTTTCGTTCCTTG

Coding sequence (CDS)

ATGGCGGAACAGACCGAGAAGGCGTTTTTGAAGCAACCCAAAGTGTTTCTCTGCTCTAAAAAGGCTGGGAAAGGGACGAGACCTGGAAAGGGTGGGAACCGTTTCTGGAAGAGTATTGGATTAGGATTCAAGACGCCAAGAGAAGCCATTGAAGGAACATATATTGATAAGAAATGCCCCTTCACTGGAACTGTCTCGGTCAGGGGACGTATTTTAGCTGGAACTTGTCATAGTGCTAAGATGGTTAGGACCATAATTGTCAGGAGGAACTACTTACATTATGTTAAGAAGTATCAGAGGTATGAGAAAAGGCACTCCAACATTCCTGCTCACATATCTCCTTGCTTTCGTGTGAAGGAGGGAGATCATGTTATTATTGGCCAATGCAGGCCATTGTCGAAGACAGTGAGGTTCAATGTGTTGAAGGTCATTCCTGCTGGATCCTCAAGTCGTGGGAAGAAGGCTTTTGCCGGAATTTAA

Protein sequence

MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Homology
[Close]
BLAST of ClCG02G003370 vs. Swiss-Prot
Match: RS11_MAIZE (40S ribosomal protein S11 OS=Zea mays GN=RPS11 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.0e-81
Identity = 144/156 (92.31%), Postives = 150/156 (96.15%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKG +PGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRI+AGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAF 157
           GDHVIIGQCRPLSKTVRFNV+KVIPAGS++ GKKAF
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAF 156

[Close]
BLAST of ClCG02G003370 vs. Swiss-Prot
Match: RS11_EUPES (40S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.3e-81
Identity = 145/159 (91.19%), Postives = 148/159 (93.08%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK GKG RPGKGGNRFWKSIGLGFKTPREAI+GTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS   KKAF  I
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159

[Close]
BLAST of ClCG02G003370 vs. Swiss-Prot
Match: RS11_SOYBN (40S ribosomal protein S11 OS=Glycine max GN=RPS11 PE=2 SV=2)

HSP 1 Score: 302.0 bits (772), Expect = 3.9e-81
Identity = 145/159 (91.19%), Postives = 148/159 (93.08%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL +KK GKG RPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTG VS+RGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAHISP FRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS  KKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159

[Close]
BLAST of ClCG02G003370 vs. Swiss-Prot
Match: RS111_ARATH (40S ribosomal protein S11-1 OS=Arabidopsis thaliana GN=RPS11A PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-80
Identity = 143/160 (89.38%), Postives = 151/160 (94.38%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKG RPGKGGNRFWK+IGLGFKTPREAI+G Y+DKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRR+YLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSR-GKKAFAGI 160
           GDH+IIGQCRPLSKTVRFNVLKVIPAGSSS  GKKAF G+
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160

[Close]
BLAST of ClCG02G003370 vs. Swiss-Prot
Match: RS113_ARATH (40S ribosomal protein S11-3 OS=Arabidopsis thaliana GN=RPS11C PE=2 SV=2)

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-80
Identity = 142/159 (89.31%), Postives = 149/159 (93.71%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SK +GKG RPGKGGNRFWK+IGLGFKTPREAI+G YID KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAG+S+ GKKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159

[Close]
BLAST of ClCG02G003370 vs. TrEMBL
Match: A0A0A0K691_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025720 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.0e-83
Identity = 151/159 (94.97%), Postives = 155/159 (97.48%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK  KG +PGKGGNRFWK+IGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGNKPGKGGNRFWKNIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of ClCG02G003370 vs. TrEMBL
Match: A0A0A0LPP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382430 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 4.9e-83
Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKG RPGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHI+PCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHIAPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS+ GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSAGGKKAFAGI 159

[Close]
BLAST of ClCG02G003370 vs. TrEMBL
Match: A0A061DWW9_THECC (Ribosomal protein S11-beta isoform 2 OS=Theobroma cacao GN=TCM_005793 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 8.4e-83
Identity = 150/159 (94.34%), Postives = 155/159 (97.48%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKG RPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM+RTIIVRRNYLHY+KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMMRTIIVRRNYLHYIKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS  GKKAFAG+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFAGM 159

[Close]
BLAST of ClCG02G003370 vs. TrEMBL
Match: A0A061GP47_THECC (Ribosomal protein S11-beta OS=Theobroma cacao GN=TCM_038251 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.1e-82
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKG RPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM+RTIIVRRNYLHY+KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMMRTIIVRRNYLHYIKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS  GKKAF GI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 159

[Close]
BLAST of ClCG02G003370 vs. TrEMBL
Match: A0A061DV21_THECC (Ribosomal protein S11-beta isoform 1 OS=Theobroma cacao GN=TCM_005793 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.1e-82
Identity = 150/158 (94.94%), Postives = 154/158 (97.47%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKG RPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM+RTIIVRRNYLHY+KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMMRTIIVRRNYLHYIKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAG 159
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS  GKKAFAG
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGKKAFAG 158

[Close]
BLAST of ClCG02G003370 vs. TAIR10
Match: AT5G23740.1 (AT5G23740.1 ribosomal protein S11-beta)

HSP 1 Score: 300.4 bits (768), Expect = 6.4e-82
Identity = 142/159 (89.31%), Postives = 149/159 (93.71%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SK +GKG RPGKGGNRFWK+IGLGFKTPREAI+G YID KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRRNYLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAG+S+ GKKAF G+
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159

[Close]
BLAST of ClCG02G003370 vs. TAIR10
Match: AT3G48930.1 (AT3G48930.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 300.4 bits (768), Expect = 6.4e-82
Identity = 143/160 (89.38%), Postives = 151/160 (94.38%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKG RPGKGGNRFWK+IGLGFKTPREAI+G Y+DKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRR+YLH+VKKYQRYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSR-GKKAFAGI 160
           GDH+IIGQCRPLSKTVRFNVLKVIPAGSSS  GKKAF G+
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160

[Close]
BLAST of ClCG02G003370 vs. TAIR10
Match: AT4G30800.1 (AT4G30800.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 298.9 bits (764), Expect = 1.9e-81
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKG RPGKGGNRFWK+IGLGFKTPREAIEGTYID+KCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRIL+GTCHSAKM RTIIVRR+YLH+VKKY+RYEKRHSNIPAH+SPCFRVKE
Sbjct: 61  FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GD V IGQCRPLSKTVRFNVLKVIPAGSSS GKKAF G+
Sbjct: 121 GDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159

[Close]
BLAST of ClCG02G003370 vs. NCBI nr
Match: gi|659093996|ref|XP_008447825.1| (PREDICTED: 40S ribosomal protein S11-like [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 3.8e-84
Identity = 153/159 (96.23%), Postives = 155/159 (97.48%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK  KG RPGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of ClCG02G003370 vs. NCBI nr
Match: gi|449471994|ref|XP_004153463.1| (PREDICTED: 40S ribosomal protein S11-like [Cucumis sativus])

HSP 1 Score: 317.4 bits (812), Expect = 1.4e-83
Identity = 151/159 (94.97%), Postives = 155/159 (97.48%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK  KG +PGKGGNRFWK+IGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKTAKGNKPGKGGNRFWKNIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           F GTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FAGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 159

[Close]
BLAST of ClCG02G003370 vs. NCBI nr
Match: gi|659088938|ref|XP_008445242.1| (PREDICTED: 40S ribosomal protein S11 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 7.1e-83
Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKG RPGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHI+PCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHIAPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS+ GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSTGGKKAFAGI 159

[Close]
BLAST of ClCG02G003370 vs. NCBI nr
Match: gi|449441892|ref|XP_004138716.1| (PREDICTED: 40S ribosomal protein S11 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 7.1e-83
Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFL SKK+GKG RPGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHI+PCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHIAPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSS+ GKKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSAGGKKAFAGI 159

[Close]
BLAST of ClCG02G003370 vs. NCBI nr
Match: gi|1012001524|ref|XP_015932385.1| (PREDICTED: 40S ribosomal protein S11 [Arachis duranensis])

HSP 1 Score: 314.3 bits (804), Expect = 1.2e-82
Identity = 150/159 (94.34%), Postives = 155/159 (97.48%), Query Frame = 1 

Query: 1   MAEQTEKAFLKQPKVFLCSKKAGKGTRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
           MAEQTEKAFLKQPKVFLCSKK+GKG RPGKGGNRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGTVSVRGRILAGTCHSAKMVRTIIVRRNYLHYVKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGTVS+RGRILAGTCHSAKM RTIIVRRNYLH++KKYQRYEKRHSNIPAHISPCFRVKE
Sbjct: 61  FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSRGKKAFAGI 160
           GDHVIIGQCRPLSKTVRFNVLKVIPAGSSS  KKAFAGI
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFAGI 159

The following BLAST results are available for this feature:
BLAST of ClCG02G003370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS11_MAIZE1.0e-8192.3140S ribosomal protein S11 OS=Zea mays GN=RPS11 PE=2 SV=1[more]
RS11_EUPES1.3e-8191.1940S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1[more]
RS11_SOYBN3.9e-8191.1940S ribosomal protein S11 OS=Glycine max GN=RPS11 PE=2 SV=2[more]
RS111_ARATH1.1e-8089.3840S ribosomal protein S11-1 OS=Arabidopsis thaliana GN=RPS11A PE=2 SV=1[more]
RS113_ARATH1.1e-8089.3140S ribosomal protein S11-3 OS=Arabidopsis thaliana GN=RPS11C PE=2 SV=2[more]
BLAST of ClCG02G003370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K691_CUCSA1.0e-8394.97Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025720 PE=3 SV=1[more]
A0A0A0LPP1_CUCSA4.9e-8394.97Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382430 PE=3 SV=1[more]
A0A061DWW9_THECC8.4e-8394.34Ribosomal protein S11-beta isoform 2 OS=Theobroma cacao GN=TCM_005793 PE=3 SV=1[more]
A0A061GP47_THECC1.1e-8294.34Ribosomal protein S11-beta OS=Theobroma cacao GN=TCM_038251 PE=3 SV=1[more]
A0A061DV21_THECC1.1e-8294.94Ribosomal protein S11-beta isoform 1 OS=Theobroma cacao GN=TCM_005793 PE=3 SV=1[more]
BLAST of ClCG02G003370 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23740.16.4e-8289.31 ribosomal protein S11-beta[more]
AT3G48930.16.4e-8289.38 Nucleic acid-binding, OB-fold-like protein[more]
AT4G30800.11.9e-8189.31 Nucleic acid-binding, OB-fold-like protein[more]
BLAST of ClCG02G003370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659093996|ref|XP_008447825.1|3.8e-8496.23PREDICTED: 40S ribosomal protein S11-like [Cucumis melo][more]
gi|449471994|ref|XP_004153463.1|1.4e-8394.97PREDICTED: 40S ribosomal protein S11-like [Cucumis sativus][more]
gi|659088938|ref|XP_008445242.1|7.1e-8394.97PREDICTED: 40S ribosomal protein S11 [Cucumis melo][more]
gi|449441892|ref|XP_004138716.1|7.1e-8394.97PREDICTED: 40S ribosomal protein S11 [Cucumis sativus][more]
gi|1012001524|ref|XP_015932385.1|1.2e-8294.34PREDICTED: 40S ribosomal protein S11 [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000266Ribosomal_S17/S11
IPR012340NA-bd_OB-fold
IPR019979Ribosomal_S17_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0034968 histone lysine methylation
biological_process GO:0009909 regulation of flower development
biological_process GO:0001510 RNA methylation
biological_process GO:0007268 chemical synaptic transmission
biological_process GO:0035235 ionotropic glutamate receptor signaling pathway
biological_process GO:0006811 ion transport
cellular_component GO:0005840 ribosome
cellular_component GO:0016020 membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004970 ionotropic glutamate receptor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G003370.1ClCG02G003370.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRODOMPD001295coord: 70..140
score: 1.0
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 131..138
score: 5.4E-12coord: 121..131
score: 5.4E-12coord: 88..111
score: 5.4
IPR000266Ribosomal protein S17/S11HAMAPMF_01345_BRibosomal_S17_Bcoord: 67..146
score: 12
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 2..159
score: 2.5E
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 74..142
score: 1.5
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 67..149
score: 4.9
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 68..147
score: 7.71
IPR019979Ribosomal protein S17, conserved sitePROSITEPS00056RIBOSOMAL_S17coord: 121..133
scor
NoneNo IPR availablePANTHERPTHR10744:SF10SUBFAMILY NOT NAMEDcoord: 2..159
score: 2.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG02G003370Csa7G025720Cucumber (Chinese Long) v2cuwcgB546
ClCG02G003370MELO3C013245Melon (DHL92) v3.5.1mewcgB196
ClCG02G003370Cla015738Watermelon (97103) v1wcgwmB198
ClCG02G003370Cla97C02G029920Watermelon (97103) v2wcgwmbB138
ClCG02G003370Bhi05G001351Wax gourdwcgwgoB266
ClCG02G003370CSPI07G01860Wild cucumber (PI 183967)cpiwcgB575
ClCG02G003370Cucsa.099770Cucumber (Gy14) v1cgywcgB130
ClCG02G003370CmaCh19G008020Cucurbita maxima (Rimu)cmawcgB460
ClCG02G003370CmoCh19G008240Cucurbita moschata (Rifu)cmowcgB459
ClCG02G003370Lsi11G012930Bottle gourd (USVL1VR-Ls)lsiwcgB097
ClCG02G003370Cp4.1LG15g06550Cucurbita pepo (Zucchini)cpewcgB233
ClCG02G003370CsGy7G001820Cucumber (Gy14) v2cgybwcgB506
ClCG02G003370MELO3C013245.2Melon (DHL92) v3.6.1medwcgB191
ClCG02G003370Carg04101Silver-seed gourdcarwcgB0194
ClCG02G003370CsaV3_7G001960Cucumber (Chinese Long) v3cucwcgB571
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG02G003370Cucumber (Gy14) v1cgywcgB185
ClCG02G003370Cucurbita maxima (Rimu)cmawcgB097
ClCG02G003370Cucurbita maxima (Rimu)cmawcgB483
ClCG02G003370Cucurbita maxima (Rimu)cmawcgB547
ClCG02G003370Cucurbita moschata (Rifu)cmowcgB094
ClCG02G003370Cucurbita moschata (Rifu)cmowcgB483
ClCG02G003370Cucurbita moschata (Rifu)cmowcgB544
ClCG02G003370Wild cucumber (PI 183967)cpiwcgB465
ClCG02G003370Cucumber (Chinese Long) v2cuwcgB443
ClCG02G003370Melon (DHL92) v3.5.1mewcgB092
ClCG02G003370Cucurbita pepo (Zucchini)cpewcgB267
ClCG02G003370Cucurbita pepo (Zucchini)cpewcgB597
ClCG02G003370Cucurbita pepo (Zucchini)cpewcgB652
ClCG02G003370Bottle gourd (USVL1VR-Ls)lsiwcgB058
ClCG02G003370Cucumber (Gy14) v2cgybwcgB409
ClCG02G003370Melon (DHL92) v3.6.1medwcgB094
ClCG02G003370Melon (DHL92) v3.6.1medwcgB193
ClCG02G003370Silver-seed gourdcarwcgB0336
ClCG02G003370Silver-seed gourdcarwcgB0350
ClCG02G003370Silver-seed gourdcarwcgB0828
ClCG02G003370Silver-seed gourdcarwcgB1037
ClCG02G003370Cucumber (Chinese Long) v3cucwcgB464