ClCG01G010020 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G010020
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Brain protein, putative
Location	CG_Chr01 : 14689270 .. 14692562 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAGATGAATATCAAAATCGCGCCCAGCCATTGACCCGCTGGCCGCCTCGAAAATCCAGTTCTATAGGAACACTATTCTTTTTATTCAACAGATTCAGACGTAAATTCAAGCTGGTGGCAAGGGCCTTTGAGCACGAGGATAAACCGGAAGAGTATTTATGGCGGCTTCGAAGCTCCAAGCATTGTGGAACCACCCTGCTGGCCCTAAAACCAGTTAGTTTGCTCGATTTTTCTCAATCGATGTTGTAATTTTTTTTCTTTGCGGATCAAATTGAAGTATGTATCTCCTTTTCCTTTGTAGTCTTAGATTTTTCTCACACCATCGCATTTTCTAAGAAGAATTTGGGTCGCGATAGATTCATTTTCAATATGATTGATTGGTTAAATTTATTTGGAACTGTAACGTTGCGATGTTAATTTTATTGTGTATTCTTTGGTCGGATAGCCGATGATCATTAATGTTCAGATGGTTTGAAATGCAGATGAAGCCTAGAGAGTTTAATAGAATGATTAGTGCAAAATCTGAAACGAGTATCTAGCAACTATTAGTCAGATAACGTGAAATTATAACGTGGATGTAAGAATCGGATTCTTTTGATTCCCTATTAGTCCTATTACCTTTGTATTTAGACCCCATAGCATAGCCCACGTGTTTCTCGTGAATAATCTCGAGGAGAGGAAAATATTACCTTTGGATTGAATATAGACGTATTGCCTTTGCGCAAATTGAAAGCATAATGACATCCCAAGGAGAGGCAAATATCCAAATCAGGAGATATGAGAGTCTCAATAGATCGTTTTCTGGACGAACTTTTCCCACATATGGCTCTTACATCCAAGATTCTTGTTAGAAAGAATTTTGGTAGGGAATTGTGCTTCTTATACAACACGGACAGGATAACTCGCCATTTTTTTAAAAAAAATTGGACATGGACATTATGAACCATTTTTATACGAGAAGGACATTCAATGAACTTATGCATGTATATACTTAAAAAATTAGTTGGAAGTATTTCGTTCTAAAAAATTATTATGTTTGTCATATATGTGTCTATTTAATATACATAGCAAGTGTTCAATGCATGTTTAACAAATGTTGAACCTACTTTTACTTTGTATAACTAGTGTCTAACACATCTATTGCACTAACAAGTGTGTGATACGTGTCCAACGAGTGTTGGAGCGAAACTAAAGTGTTCATGCCTCTTAGCTTCTATTTCATGATGAGGGTACAGTTACTACCTGCTGTTGGTTGTAGCATTGATAAATGAAACTCCTCTTAATGTCTGCTGCCCATCATTCTTCACATTCTTTACTTGTAAGGGCATCATCACAGAGGCCGTAATTCTCAAGTTAGGAAATTTCTTTCAAGAAATTTACTAAAATTTTTTCCAATGAGAGTGGAACTTGCTCATAATAATGTTGTGCCTGATCCTTTACCTTCATAATCTTCTATTTTGTCATTTTTTATAAGAAACTTTTATTGAGAATAATGAAAGAATACAATGGCATAAAAAGGACAAGCCCATAAGAGGAGTCATCAGCTACCTGTAGGAAAGGACTCTGATCCAAAAGACTAATACCAAATTGACAATTACAAAAAGTCTAATTAACGGTTGCCCATAAATATGCATTAAATCTCACAGCCTCCCGCACCTCCTCCAAAGTCTTCCACTCCTTCAAAAATGCTAAGTTTCTTCCGAGCTTCTCCCCAAAAGATAGCAATAAAATTGGCCTACCCCATAGGAGTCCCTTTATCCAAAGATGAAAGATCATCAGTATCTCCTCAATATAGAACAAAAATCCCTATTACATACCACAGCTCCAAACACACTGAAGCATGACTCCAAAGGGAGTAACAAGCAACCCCAGAAAATATAATCAAGATCCTCTTCTACTTTGCAAATTTCAATCAAGTAGTATTAAAATGTTCAAGTGGTTACCTCATCTGAAGTTTGAATCATGAATTCTCATTTTTAATATGGATCAAAAGAAACTTTATTCTTCTCATCACATAATAATGACATCTTTGTACCTTTTTTTCAGTCGATAACATTGTTTCTTATTCATAAATAAATAACAAAAGTTAGACTTCTTCCTTGCTTCAACTAATGTCTAATGATATGGTTCCTTATTGGCACATTTACCTACTGGGTTTTATAATAGGATCTGGTTCTATACCGACATTAATCTAAAACATTATTGTGACATACCTGGATATTTTATTGCATGATCTGTTGTAGGAATGCATGGTCTTAAAAATGAGATTAACTTCTGTGGCCTGGTATGCTCCTGTCACAAAAAGTTCATTTTCCATTACAATATATTTTACTAATCTCAATTGGAAGGCTTTCTTTTGTAATAACTCTTTTGAGAAGGTTTGCTTCTTCTTGCACACCCCACTTTGTATCCTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATATTAGTTTCTCAATTGAAAAAAAATTAAAAAACTAAAAGTTTTATTTATAGAATTTTTTAAAAATAATATTAGTTTTTTTTATAATATCTGTTTTTTAATTAAAAAAATTTAGGACTTGTTTAGGGTTTTCTTGAAAAAAAATTTAGCTTAAGAATTTCTTAAAAAAAAGATAATATTAATTTTTTCTTTAAAAAAATAATATTAATTTTGTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTAATAACATTATCCATCATTAAAAAGAAAAACCAATTATCATTTGTGGTCTTGTAATATTATTGTGAATCTCCTCTGGAATTTTGATATGTAATAATTGATGTCATTCTGTTGATAAGCATTTTTTCAGTCTATGGTTTAAACTAAATCCTGTTTGTAACACAGTTCACTTCTGGGCACCGACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAAAAACTTTCTTATCCTCAGCAAATAGGTATGTATGTTCTCTGTGGCATTGGATATTCAAAGGGATTAGAAAAAAAGGTCATTCAAGCCACGTAAAGTTCATACCTTCTCAGTTTTTCTATCATCTATATCTTTTCTCATGTGCACTCATATTGCAATTTTGAAGGAAGAGTTATAATTTAATATATTTTCCTTTCTGTTATAGTTTGATTTTGAGTTGGAACAATTCCTTTATTGACTGTTTTCTTCATATCATATGCATCCAGCTGTTACAGCCACTGGAGTTATTTGGTCACGTTACAGCACTGTGATCACACCGGTAAGTTAAAGAAATGATTTGACAATTGAATGCAG

mRNA sequence

AATAGATGAATATCAAAATCGCGCCCAGCCATTGACCCGCTGGCCGCCTCGAAAATCCAGTTCTATAGGAACACTATTCTTTTTATTCAACAGATTCAGACGTAAATTCAAGCTGGTGGCAAGGGCCTTTGAGCACGAGGATAAACCGGAAGAGTATTTATGGCGGCTTCGAAGCTCCAAGCATTGTGGAACCACCCTGCTGGCCCTAAAACCATTCACTTCTGGGCACCGACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAAAAACTTTCTTATCCTCAGCAAATAGCTGTTACAGCCACTGGAGTTATTTGGTCACGTTACAGCACTGTGATCACACCGGTAAGTTAAAGAAATGATTTGACAATTGAATGCAG

Coding sequence (CDS)

ATGGCGGCTTCGAAGCTCCAAGCATTGTGGAACCACCCTGCTGGCCCTAAAACCATTCACTTCTGGGCACCGACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAAAAACTTTCTTATCCTCAGCAAATAGCTGTTACAGCCACTGGAGTTATTTGGTCACGTTACAGCACTGTGATCACACCGGTAAGTTAA

Protein sequence

MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIWSRYSTVITPVS

Homology

[Close]

BLAST of ClCG01G010020 vs. Swiss-Prot
Match: MPC4_ARATH (Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-32
Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA SKLQA+WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TGVIW
Sbjct: 1  MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 61 SRYSTVITP 70
          SRYS VI P
Sbjct: 61 SRYSMVINP 69

[Close]

BLAST of ClCG01G010020 vs. Swiss-Prot
Match: MPC3_ARATH (Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana GN=MPC3 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.3e-32
Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA SKLQALWNHPAGPKTIHFWAPTFKWGISIANIADF KPPE LSYPQQI +T TG++W
Sbjct: 1  MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIVITGTGLVW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of ClCG01G010020 vs. Swiss-Prot
Match: MPC2_ARATH (Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana GN=MPC2 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.9e-30
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA SKLQALWNHPAGPKTIHFWAPTFKWGISIANIADF KPPE +SY QQIAVT TG+IW
Sbjct: 1  MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPENISYLQQIAVTCTGMIW 60

Query: 61 SRYSTVITP 70
           R ST+ITP
Sbjct: 61 CRCSTIITP 69

[Close]

BLAST of ClCG01G010020 vs. Swiss-Prot
Match: MPC2_HUMAN (Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.3e-17
Identity = 39/69 (56.52%), Postives = 46/69 (66.67%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          M   KL+ L+NHPAGP+T+ FWAP  KWG+  A +AD ++P EKLS  Q   + ATG IW
Sbjct: 23 MLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSAVLMATGFIW 82

Query: 61 SRYSTVITP 70
          SRYS VI P
Sbjct: 83 SRYSLVIIP 91

[Close]

BLAST of ClCG01G010020 vs. Swiss-Prot
Match: MPC2_MOUSE (Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.2e-17
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 1


Query: 5  KLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIWSRYS 64
          KL+ L+NHPAGP+T+ FWAP  KWG+  A +AD ++P EKLS  Q   + ATG IWSRYS
Sbjct: 27 KLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYS 86

Query: 65 TVITP 70
           VI P
Sbjct: 87 LVIIP 91

[Close]

BLAST of ClCG01G010020 vs. TrEMBL
Match: A0A0A0LTI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195220 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 4.7e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEK+SYPQQIAVTATGVIW
Sbjct: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKISYPQQIAVTATGVIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of ClCG01G010020 vs. TrEMBL
Match: I1KZY3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G009300 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.0e-33
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAA+KLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of ClCG01G010020 vs. TrEMBL
Match: A0A0L9VE22_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g196400 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.0e-33
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAA+KLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 30 MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 89

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 90 SRYSTVITP 98

[Close]

BLAST of ClCG01G010020 vs. TrEMBL
Match: I1MFM5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G113800 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.0e-33
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAA+KLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of ClCG01G010020 vs. TrEMBL
Match: I1KZY1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.0e-33
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAA+KLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of ClCG01G010020 vs. TAIR10
Match: AT4G22310.1 (AT4G22310.1 Uncharacterised protein family (UPF0041))

HSP 1 Score: 139.4 bits (350), Expect = 8.4e-34
Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA SKLQA+WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TGVIW
Sbjct: 1  MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 61 SRYSTVITP 70
          SRYS VI P
Sbjct: 61 SRYSMVINP 69

[Close]

BLAST of ClCG01G010020 vs. TAIR10
Match: AT4G14695.1 (AT4G14695.1 Uncharacterised protein family (UPF0041))

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-31
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA SKLQALWNHPAGPKTIHFWAPTFKWGISIANIADF KPPE +SY QQIAVT TG+IW
Sbjct: 1  MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPENISYLQQIAVTCTGMIW 60

Query: 61 SRYSTVITP 70
           R ST+ITP
Sbjct: 61 CRCSTIITP 69

[Close]

BLAST of ClCG01G010020 vs. TAIR10
Match: AT4G05590.2 (AT4G05590.2 Uncharacterised protein family UPF0041 (InterPro:IPR005336))

HSP 1 Score: 119.4 bits (298), Expect = 9.0e-28
Identity = 61/107 (57.01%), Postives = 63/107 (58.88%), Query Frame = 1


Query: 1   MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQI--------- 60
           MA SKLQALWNHPAGPKTIHFWAPTFKWGISIANIADF KPPE LSYPQQI         
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIGIILTIGLS 60

Query: 61  -----------------------------AVTATGVIWSRYSTVITP 70
                                         +T TG++WSRYSTVITP
Sbjct: 61  YLYSAHIAVMYRCVNFNVYMMPRMAVIVSVITGTGLVWSRYSTVITP 107

[Close]

BLAST of ClCG01G010020 vs. TAIR10
Match: AT5G20090.1 (AT5G20090.1 Uncharacterised protein family (UPF0041))

HSP 1 Score: 63.5 bits (153), Expect = 5.9e-11
Identity = 27/69 (39.13%), Postives = 36/69 (52.17%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA S+ QA  N P GPKT HFW P   WG   A + D  KPPE +S     A+     ++
Sbjct: 1  MATSRFQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMSSAMCVYSALF 60

Query: 61 SRYSTVITP 70
           R++ ++ P
Sbjct: 61 MRFAWMVQP 69

[Close]

BLAST of ClCG01G010020 vs. NCBI nr
Match: gi|778659839|ref|XP_011655152.1| (PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 6.7e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEK+SYPQQIAVTATGVIW
Sbjct: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKISYPQQIAVTATGVIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of ClCG01G010020 vs. NCBI nr
Match: gi|947087866|gb|KRH36531.1| (hypothetical protein GLYMA_09G009300 [Glycine max])

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-32
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAA+KLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of ClCG01G010020 vs. NCBI nr
Match: gi|920712056|gb|KOM53305.1| (hypothetical protein LR48_Vigan09g196400 [Vigna angularis])

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-32
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAA+KLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 30 MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 89

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 90 SRYSTVITP 98

[Close]

BLAST of ClCG01G010020 vs. NCBI nr
Match: gi|351725183|ref|NP_001238619.1| (uncharacterized protein LOC100306167 [Glycine max])

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-32
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAA+KLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of ClCG01G010020 vs. NCBI nr
Match: gi|734420451|gb|KHN40838.1| (Brain protein 44 [Glycine soja])

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-32
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAA+KLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

The following BLAST results are available for this feature:

BLAST of ClCG01G010020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MPC4_ARATH	1.5e-32	91.30	Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1	[more]
MPC3_ARATH	3.3e-32	88.41	Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana GN=MPC3 PE=2 SV=1	[more]
MPC2_ARATH	6.9e-30	85.51	Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana GN=MPC2 PE=3 SV=1	[more]
MPC2_HUMAN	2.3e-17	56.52	Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1	[more]
MPC2_MOUSE	5.2e-17	58.46	Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1	[more]

BLAST of ClCG01G010020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTI1_CUCSA	4.7e-33	98.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195220 PE=4 SV=1	[more]
I1KZY3_SOYBN	8.0e-33	97.10	Uncharacterized protein OS=Glycine max GN=GLYMA_09G009300 PE=4 SV=1	[more]
A0A0L9VE22_PHAAN	8.0e-33	97.10	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g196400 PE=4 SV=1	[more]
I1MFM5_SOYBN	8.0e-33	97.10	Uncharacterized protein OS=Glycine max GN=GLYMA_15G113800 PE=4 SV=1	[more]
I1KZY1_SOYBN	8.0e-33	97.10	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]

BLAST of ClCG01G010020 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22310.1	8.4e-34	91.30	Uncharacterised protein family (UPF0041)	[more]
AT4G14695.1	3.9e-31	85.51	Uncharacterised protein family (UPF0041)	[more]
AT4G05590.2	9.0e-28	57.01	Uncharacterised protein family UPF0041 (InterPro:IPR005336)	[more]
AT5G20090.1	5.9e-11	39.13	Uncharacterised protein family (UPF0041)	[more]

BLAST of ClCG01G010020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778659839\|ref\|XP_011655152.1\|	6.7e-33	98.55	PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus]	[more]
gi\|947087866\|gb\|KRH36531.1\|	1.1e-32	97.10	hypothetical protein GLYMA_09G009300 [Glycine max]	[more]
gi\|920712056\|gb\|KOM53305.1\|	1.1e-32	97.10	hypothetical protein LR48_Vigan09g196400 [Vigna angularis]	[more]
gi\|351725183\|ref\|NP_001238619.1\|	1.1e-32	97.10	uncharacterized protein LOC100306167 [Glycine max]	[more]
gi\|734420451\|gb\|KHN40838.1\|	1.1e-32	97.10	Brain protein 44 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005336	MPC

Vocabulary: **Cellular Component**
Term	Definition
GO:0005743	mitochondrial inner membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006850	mitochondrial pyruvate transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006850	mitochondrial pyruvate transport
biological_process	GO:0006810	transport
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0050833	pyruvate transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G010020.1	ClCG01G010020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005336	Mitochondrial pyruvate carrier	PFAM	PF03650	MPC	coord: 6..69 score: 7.8
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 1..69 score: 1.0
None	No IPR available	PANTHER	PTHR14154:SF2	MITOCHONDRIAL PYRUVATE CARRIER 2	coord: 1..69 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G010020	Csa1G195220	Cucumber (Chinese Long) v2	cuwcgB022
ClCG01G010020	MELO3C021698	Melon (DHL92) v3.5.1	mewcgB140
ClCG01G010020	Bhi08G000675	Wax gourd	wcgwgoB233
ClCG01G010020	CSPI01G16160	Wild cucumber (PI 183967)	cpiwcgB025
ClCG01G010020	CmaCh13G004050	Cucurbita maxima (Rimu)	cmawcgB186
ClCG01G010020	CmaCh18G005800	Cucurbita maxima (Rimu)	cmawcgB350
ClCG01G010020	CmoCh18G005710	Cucurbita moschata (Rifu)	cmowcgB340
ClCG01G010020	CmoCh13G004290	Cucurbita moschata (Rifu)	cmowcgB177
ClCG01G010020	Lsi02G010930	Bottle gourd (USVL1VR-Ls)	lsiwcgB169
ClCG01G010020	Cp4.1LG20g06390	Cucurbita pepo (Zucchini)	cpewcgB451
ClCG01G010020	CsGy1G015770	Cucumber (Gy14) v2	cgybwcgB021
ClCG01G010020	MELO3C021698.2	Melon (DHL92) v3.6.1	medwcgB132
ClCG01G010020	Carg25133	Silver-seed gourd	carwcgB1012
ClCG01G010020	CsaV3_1G018420	Cucumber (Chinese Long) v3	cucwcgB024

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G010020	Watermelon (97103) v2	wcgwmbB089
ClCG01G010020	Cucurbita maxima (Rimu)	cmawcgB342
ClCG01G010020	Watermelon (97103) v1	wcgwmB146