Lsi02G010930 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G010930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Mitochondrial pyruvate carrier 2
Location	chr02 : 12354492 .. 12358115 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGTAAAAGTCAACAAATGAATATCAAAATCGCGCCCAGCCATGGACCAGCTTGGCCGCCTCGAAAATCCAGTTCTATAAGATTATTCTTTTGATTGAGCGGATTCAGACGTAAATTCAAGCTGGTAACAAGGGCCTTTGAGCACGAGGATAAAGCAGAAGAGTATTTATGGCGGCTGCGAAGCTACAAGCATTGTGGAACCACCCTGCTGGCCCTAAAACCAGTTAGTTTGCTCAATCTTTCACAATCGATGTTGTAATTTTTGTTCTTTACGGATCAAATTGAAGTATGGTATCTCCTTTTCCTTAATGTCTTAGATTTTTCTCATACCATCTCATTTTCTAAGAAGAATTTGGCTCGCGATAGATCTATTTTCGATATGATTGATTGATTGAATTTATTTGGAAGTGTAACGTTGCGATGTTAATTTTATTGTGTACTCTTTGGTCGGATAGCCGATGATCATTTATTTTCAGATGGTTTGAAATGCAGATGAAGCCCAGAGAGTTTAATAGAATGATTAGTGCAAAATCTGAAACGAGTATCTAGCAATTATTAGTCAGTCAACGTGAAATTATATCGTGGATGTAAGAATCGGATTCTTTGGATTCCCTATTAGTTCAATTACCTTTGTATTTAGACCCCATAGCATAGCCCTTGTGTTTCTCGTGAATGATCTCGAGGAGAGCGAAATATTACCTTTGGATTGGAAATAGACGTATTACCTTTGCGCAAATTGAAAGCATAATGACATCCCAAGGAGAGGCAAATATTCAAATTAGGAGATATGAGAGTCTCAATAGATCGTTTTGTGGACAAACTTTTCCCACATATGGGCTCTTACTTCCTAAAGATGCTTGTTAGAAAGAATTTTGATGGGGAATTGTGCTTTTGCTCTAAGAAGCATGGATACAGATATGGGACATAGATACAACACAGACACGATAACATGCCATTTTTTTAAAAATCTGGACATGGGCATTTTTGTACCATTTTTATACAAGAAGGAATTCAAAGTCAATGAACTTATGCATGTATATCCTTAAAAAATTAGTTGGATGTATTTTGTTCTAAAAAATTATTATTTTTGTTATATACGTGTCTATTTAATATAATGAGCAAGTGTTCAATGCATGTTTGACAAACGTTGAAACTACTTTGACTTCGTATAACTAGTGTCTAACACATCTATTGCACTGATAAGTGTGCAATATGTGTCCAACAAGTGTTGGAGAGAAACTAAAGTGTCCGTGCCTCTTAGCTTCTACTTCATGATGAGGGTACAACTACTACCTGCTCTTGGTTGTAGCAATGATAAATGAAACTCCTCTTAATGCCCACTGCCCATTATTCTTCACATTCTTTACTTGTAGGGCATCATCACAGAGGCCGTAATTCTCAAGTTAGGAAATTTCTTCAAGAAATTTACTCGAAACTTCTCCAATGAGAGTGGAACTTGCTCAAAATATTGTTGTGCCTGATCCTTTGCCTTCATATTCTTCTACTTTGTCATTCTTTTTAAGAAACTTTTGTTGAGAATAATGAAAGAATACAATGACATAAAAAGGACAGGCCCATGAGAGGAGTCATTAGCTACCTATAGGAAAGGACCCTGATCCAGAAGTCTAATACCAAATTGATAATTACAAAAAGTTCAATTAACGGATGCCCATTAAGATGTATTAAATCTCACAGCCTCCCACACCTCCTCCAAAGTCCTCCTCCACTCCTTTAAAAATGCTAATTTTCTTCCGAGCCACACTCCCCAAAAGATAGCAAAAAAATTGGCCTACCATAGTAGTTCCTTTATCCAAAGAGGAAAAATCATCAGTATCTCCTCAATTATAGAACGACACTGGACAATCCCTATTACTACCACAGCTCCAAACACACTGAAGCATTGACTCCAAGGGAGTAACAAGCAACCCCAGAAAATATAATCAAGATCCTCCTTTTACTTTGCGATTTTCAATCAAGTGGTATTAAAATGTTACAAGTGGTTACATAATCTGAAGTTTGAATCATGAATTTTCATTTTTAATATGGATCAAAAGAAACTTTATTCTTCTCATCACAGTATAATGACATCTTTGTACTTTTTTTTCAGTTGATAACATTGTTTCTTATTCATAAATAAATAGCTGAAGTTAGACTTCTTCCTTGCTTCGACTAATGTCTCATGATATGGTTCCTTATTGAGAAATTTACCTACTGGATTTTATAATAGGATGTGATTCAATACCTACATTGATCTAAAAACGTTAGTAGGATTAAAATTCCAAGGAAGGTGAGGTTTTTTACCTAGCAAGTTCTTCATGGCCGTGCTAACACATTGGATCAGCTTGTTGGGCCTTTTTCTTGTATTCTTTGTCAGAAGGTGGAAGAAGACTTGAACCATATTCTTTGGCACTGTGATTATGCGAGTAGTGTTTGGGATTCTGGTGTTTGGTTTGATGTATGTTCGTCAAAGAAACATAGCAATATGATCGAGGAGTTCCCCCGCAATCTGTCTTTTGTGGAGAGGGCCATTTTTTATGGCTTGCGGGGGTGTGCGATTATTCGGGTTCTGTGGGGTGAGCGGAATAGTAGGGTATTTGGGGGTATGGAAAGGGATCCTTTGGAGACTTGGTCCCTCATTTGTTTCCATATCTCTTTATGGGTTTCAATTTCAAAGACCTTTTGTAATTATTCTATAGCCACTATTCTGCATGGTTGAAGTCCGTTTTTGTAGAGGGAGTTTCCTTTTTTGTATGCCCATGTATTCTTTCATTTTTTCTCAATGAAAGTTATTGTTTTCATTGAAAAAAAAAAAAAAAAAAGCAAAAACACACTAGAAACATTATTGTGACATACCTGGATATTTTACTGCGTGATCTCTTGTAGGAATGGGTCTTAGAAATGAAATTAACTTCTGTGGCCTTGTATGCTCCCGTCACTAAAAATTCGTTTTTAATTACAATATATTTTAATAATCTCAATTGGAAGACTTTCTTTTTTGAGAAGGTTTGCTTCTTCTTGCACACCCCACTTTGTATCCTATTTTGTTATTTGTTAATAATATTATTCATTATTAAAAAGAAAAACCAATTATCATTTGTGGTCTTGTAATATTGTTGTTGCTTAGCTCCTCTGGAATTTTTGACATGTAATAATTGAGGCCATTCTGTTGATAAGCATTTTTTCAGTCTATGGTTTAAACTGAATCCTGTTTGTTAACACAGTTCACTTCTGGGCACCGACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAAAAACTTTCTTATCCTCAGCAAATAGGTATGTGTGTTCTCTGTGGCATTGGATATTCAAAGGGATAAAAAAGAAAAGGTCATTCAAGGCATGTAAAGTTCATACCTTTTCAGTTTTTCTATCACATATATCTTTTCTCACATGCACTCATATTGCAATTTTGAAGGAAGATTAATAATTTAATATATTTTCCTTTCTGTTATAGTTTGATTTTGAGTTAGAACAATTCCTTTATTGACTTTGTTTTCTTCATATCACATGCATCCAGCTGTTACAGCCACTGGAGTTATCTGGTCACGTTACAGCACTGTGATCACACCGGTAAGTTAA

mRNA sequence

AAGGTAAAAGTCAACAAATGAATATCAAAATCGCGCCCAGCCATGGACCAGCTTGGCCGCCTCGAAAATCCAGTTCTATAAGATTATTCTTTTGATTGAGCGGATTCAGACGTAAATTCAAGCTGGTAACAAGGGCCTTTGAGCACGAGGATAAAGCAGAAGAGTATTTATGGCGGCTGCGAAGCTACAAGCATTGTGGAACCACCCTGCTGGCCCTAAAACCATTCACTTCTGGGCACCGACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAAAAACTTTCTTATCCTCAGCAAATAGCTGTTACAGCCACTGGAGTTATCTGGTCACGTTACAGCACTGTGATCACACCGGTAAGTTAA

Coding sequence (CDS)

ATGGCGGCTGCGAAGCTACAAGCATTGTGGAACCACCCTGCTGGCCCTAAAACCATTCACTTCTGGGCACCGACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAAAAACTTTCTTATCCTCAGCAAATAGCTGTTACAGCCACTGGAGTTATCTGGTCACGTTACAGCACTGTGATCACACCGGTAAGTTAA

Protein sequence

MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIWSRYSTVITPVS

Homology

[Close]

BLAST of Lsi02G010930 vs. Swiss-Prot
Match: MPC4_ARATH (Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-32
Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA +KLQA+WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TGVIW
Sbjct: 1  MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 61 SRYSTVITP 70
          SRYS VI P
Sbjct: 61 SRYSMVINP 69

[Close]

BLAST of Lsi02G010930 vs. Swiss-Prot
Match: MPC3_ARATH (Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana GN=MPC3 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.3e-32
Identity = 60/69 (86.96%), Postives = 64/69 (92.75%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA +KLQALWNHPAGPKTIHFWAPTFKWGISIANIADF KPPE LSYPQQI +T TG++W
Sbjct: 1  MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIVITGTGLVW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of Lsi02G010930 vs. Swiss-Prot
Match: MPC2_ARATH (Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana GN=MPC2 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.9e-30
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA +KLQALWNHPAGPKTIHFWAPTFKWGISIANIADF KPPE +SY QQIAVT TG+IW
Sbjct: 1  MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPENISYLQQIAVTCTGMIW 60

Query: 61 SRYSTVITP 70
           R ST+ITP
Sbjct: 61 CRCSTIITP 69

[Close]

BLAST of Lsi02G010930 vs. Swiss-Prot
Match: MPC2_HUMAN (Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-17
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          M   KL+ L+NHPAGP+T+ FWAP  KWG+  A +AD ++P EKLS  Q   + ATG IW
Sbjct: 23 MLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSAVLMATGFIW 82

Query: 61 SRYSTVITP 70
          SRYS VI P
Sbjct: 83 SRYSLVIIP 91

[Close]

BLAST of Lsi02G010930 vs. Swiss-Prot
Match: MPC2_MOUSE (Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-17
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 1


Query: 5  KLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIWSRYS 64
          KL+ L+NHPAGP+T+ FWAP  KWG+  A +AD ++P EKLS  Q   + ATG IWSRYS
Sbjct: 27 KLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYS 86

Query: 65 TVITP 70
           VI P
Sbjct: 87 LVIIP 91

[Close]

BLAST of Lsi02G010930 vs. TrEMBL
Match: A0A0L9VE22_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g196400 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 30 MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 89

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 90 SRYSTVITP 98

[Close]

BLAST of Lsi02G010930 vs. TrEMBL
Match: I1KZY1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of Lsi02G010930 vs. TrEMBL
Match: I1KZY3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G009300 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of Lsi02G010930 vs. TrEMBL
Match: I1MFM5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G113800 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of Lsi02G010930 vs. TrEMBL
Match: A0A0B2S7Y6_GLYSO (Brain protein 44 OS=Glycine soja GN=glysoja_015205 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of Lsi02G010930 vs. TAIR10
Match: AT4G22310.1 (AT4G22310.1 Uncharacterised protein family (UPF0041))

HSP 1 Score: 139.4 bits (350), Expect = 8.4e-34
Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA +KLQA+WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TGVIW
Sbjct: 1  MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 61 SRYSTVITP 70
          SRYS VI P
Sbjct: 61 SRYSMVINP 69

[Close]

BLAST of Lsi02G010930 vs. TAIR10
Match: AT4G14695.1 (AT4G14695.1 Uncharacterised protein family (UPF0041))

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-31
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA +KLQALWNHPAGPKTIHFWAPTFKWGISIANIADF KPPE +SY QQIAVT TG+IW
Sbjct: 1  MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPENISYLQQIAVTCTGMIW 60

Query: 61 SRYSTVITP 70
           R ST+ITP
Sbjct: 61 CRCSTIITP 69

[Close]

BLAST of Lsi02G010930 vs. TAIR10
Match: AT4G05590.2 (AT4G05590.2 Uncharacterised protein family UPF0041 (InterPro:IPR005336))

HSP 1 Score: 119.4 bits (298), Expect = 9.0e-28
Identity = 60/107 (56.07%), Postives = 64/107 (59.81%), Query Frame = 1


Query: 1   MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQI--------- 60
           MA +KLQALWNHPAGPKTIHFWAPTFKWGISIANIADF KPPE LSYPQQI         
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIGIILTIGLS 60

Query: 61  -----------------------------AVTATGVIWSRYSTVITP 70
                                         +T TG++WSRYSTVITP
Sbjct: 61  YLYSAHIAVMYRCVNFNVYMMPRMAVIVSVITGTGLVWSRYSTVITP 107

[Close]

BLAST of Lsi02G010930 vs. TAIR10
Match: AT5G20090.1 (AT5G20090.1 Uncharacterised protein family (UPF0041))

HSP 1 Score: 63.5 bits (153), Expect = 5.9e-11
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MA ++ QA  N P GPKT HFW P   WG   A + D  KPPE +S     A+     ++
Sbjct: 1  MATSRFQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMSSAMCVYSALF 60

Query: 61 SRYSTVITP 70
           R++ ++ P
Sbjct: 61 MRFAWMVQP 69

[Close]

BLAST of Lsi02G010930 vs. NCBI nr
Match: gi|947087866|gb|KRH36531.1| (hypothetical protein GLYMA_09G009300 [Glycine max])

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of Lsi02G010930 vs. NCBI nr
Match: gi|920712056|gb|KOM53305.1| (hypothetical protein LR48_Vigan09g196400 [Vigna angularis])

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 30 MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 89

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 90 SRYSTVITP 98

[Close]

BLAST of Lsi02G010930 vs. NCBI nr
Match: gi|351725183|ref|NP_001238619.1| (uncharacterized protein LOC100306167 [Glycine max])

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of Lsi02G010930 vs. NCBI nr
Match: gi|734420451|gb|KHN40838.1| (Brain protein 44 [Glycine soja])

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

[Close]

BLAST of Lsi02G010930 vs. NCBI nr
Match: gi|947062256|gb|KRH11517.1| (hypothetical protein GLYMA_15G113800 [Glycine max])

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-33
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGVIW 60
          MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATG+IW
Sbjct: 1  MAAAKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60

Query: 61 SRYSTVITP 70
          SRYSTVITP
Sbjct: 61 SRYSTVITP 69

The following BLAST results are available for this feature:

BLAST of Lsi02G010930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MPC4_ARATH	1.5e-32	89.86	Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1	[more]
MPC3_ARATH	3.3e-32	86.96	Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana GN=MPC3 PE=2 SV=1	[more]
MPC2_ARATH	6.9e-30	84.06	Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana GN=MPC2 PE=3 SV=1	[more]
MPC2_HUMAN	1.4e-17	56.52	Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1	[more]
MPC2_MOUSE	1.8e-17	58.46	Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1	[more]

BLAST of Lsi02G010930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0L9VE22_PHAAN	1.6e-33	98.55	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g196400 PE=4 SV=1	[more]
I1KZY1_SOYBN	1.6e-33	98.55	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
I1KZY3_SOYBN	1.6e-33	98.55	Uncharacterized protein OS=Glycine max GN=GLYMA_09G009300 PE=4 SV=1	[more]
I1MFM5_SOYBN	1.6e-33	98.55	Uncharacterized protein OS=Glycine max GN=GLYMA_15G113800 PE=4 SV=1	[more]
A0A0B2S7Y6_GLYSO	1.6e-33	98.55	Brain protein 44 OS=Glycine soja GN=glysoja_015205 PE=4 SV=1	[more]

BLAST of Lsi02G010930 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22310.1	8.4e-34	89.86	Uncharacterised protein family (UPF0041)	[more]
AT4G14695.1	3.9e-31	84.06	Uncharacterised protein family (UPF0041)	[more]
AT4G05590.2	9.0e-28	56.07	Uncharacterised protein family UPF0041 (InterPro:IPR005336)	[more]
AT5G20090.1	5.9e-11	37.68	Uncharacterised protein family (UPF0041)	[more]

BLAST of Lsi02G010930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|947087866\|gb\|KRH36531.1\|	2.3e-33	98.55	hypothetical protein GLYMA_09G009300 [Glycine max]	[more]
gi\|920712056\|gb\|KOM53305.1\|	2.3e-33	98.55	hypothetical protein LR48_Vigan09g196400 [Vigna angularis]	[more]
gi\|351725183\|ref\|NP_001238619.1\|	2.3e-33	98.55	uncharacterized protein LOC100306167 [Glycine max]	[more]
gi\|734420451\|gb\|KHN40838.1\|	2.3e-33	98.55	Brain protein 44 [Glycine soja]	[more]
gi\|947062256\|gb\|KRH11517.1\|	2.3e-33	98.55	hypothetical protein GLYMA_15G113800 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006850	mitochondrial pyruvate transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0005743	mitochondrial inner membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR005336	MPC

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006850	mitochondrial pyruvate transport
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0050833	pyruvate transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G010930.1	Lsi02G010930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005336	Mitochondrial pyruvate carrier	PFAM	PF03650	MPC	coord: 6..69 score: 7.8
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 1..69 score: 1.6
None	No IPR available	PANTHER	PTHR14154:SF2	MITOCHONDRIAL PYRUVATE CARRIER 2	coord: 1..69 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G010930	MELO3C021698	Melon (DHL92) v3.5.1	lsimeB180
Lsi02G010930	ClCG01G010020	Watermelon (Charleston Gray)	lsiwcgB169
Lsi02G010930	CsGy1G015770	Cucumber (Gy14) v2	cgyblsiB029

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G010930	Bottle gourd (USVL1VR-Ls)	lsilsiB064
Lsi02G010930	Cucumber (Gy14) v1	cgylsiB024
Lsi02G010930	Cucurbita maxima (Rimu)	cmalsiB207
Lsi02G010930	Cucurbita maxima (Rimu)	cmalsiB369
Lsi02G010930	Cucurbita moschata (Rifu)	cmolsiB197
Lsi02G010930	Cucurbita pepo (Zucchini)	cpelsiB417
Lsi02G010930	Wild cucumber (PI 183967)	cpilsiB033
Lsi02G010930	Wild cucumber (PI 183967)	cpilsiB447
Lsi02G010930	Cucumber (Chinese Long) v2	culsiB032
Lsi02G010930	Melon (DHL92) v3.5.1	lsimeB227
Lsi02G010930	Watermelon (Charleston Gray)	lsiwcgB175
Lsi02G010930	Watermelon (97103) v1	lsiwmB201
Lsi02G010930	Cucumber (Gy14) v2	cgyblsiB407
Lsi02G010930	Melon (DHL92) v3.6.1	lsimedB190
Lsi02G010930	Melon (DHL92) v3.6.1	lsimedB238
Lsi02G010930	Silver-seed gourd	carlsiB949
Lsi02G010930	Cucumber (Chinese Long) v3	cuclsiB033
Lsi02G010930	Cucumber (Chinese Long) v3	cuclsiB470
Lsi02G010930	Watermelon (97103) v2	lsiwmbB153
Lsi02G010930	Watermelon (97103) v2	lsiwmbB160
Lsi02G010930	Wax gourd	lsiwgoB233
Lsi02G010930	Wax gourd	lsiwgoB245
Lsi02G010930	Wax gourd	lsiwgoB255