CmaCh18G005800 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G005800
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Mitochondrial pyruvate carrier 2
Location	Cma_Chr18 : 3909887 .. 3915060 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCATCTCATCTCATCTCAATCACCATCATATATTAAAACAACAATGCGGTCAGCCATTGACTTGCTTCGCCGCCTCCATTTATCTTAAGCCCATTCGCCATAAATCCAAGCTGGTGGAAGGGCATTTGAGCACGAGGAATAGGATAAAGCACGAGAGTATTTATGGCGGCGTCGAAGCTCCAAGCCTTCTGGAACCATCCTGCTGGCCCTAAAACCAGTTAGTTTCTTCCATTTTTCGCAATCCCTGCTTTAATTCTTGTTCTTTAGCGGTCAAATTCAAGTATGGTATCTCATTTTTTCTTTCGTCTTAGGGCTTGCTCATACCGTCTCGTTTTATAAGAAGAATCTGGATCGCGAACGATCCGTTTTCAATTTGATTGATTGCTTAAATTTTGCTCCGATGATCGTTGATTTTCAGATGCCAGATGATTTTATAGAATGATTAATGCAGAATCTAAAACGAGTATCTACCTACTATTAGTCAGTCAAATTGAAACTATATCGTGAATGATCTACATAATCGCAATTACTTCATATTTAGAATCCATAGGCTACGTTCTTTCTCGTGAATCATCTTTTAATTCAATATTTCTTCGGGTTGTGTTCTGCGCAATTGAAGGCGTAAGGACATCCCGAGCAGAGGAAAATATTCAGAGGAGGAACCTTCAGATAGGTAAGACTCACTTGATGTACTTGGACCCTGGGCAACTTTTTTATGAATAGCTATCCCAATTAGACCATCCCATAATACTATCTGATGAGCGGTGTAAAATAAGCTTAGTTCATGTTGGGCTTGACTAGCTAGGGTGAAATATGTCCCCCTGCCTGGGTAAGCCAGCTGATTGAGCCAGAGTCTCATTTGATAGTTTTGGACAATTTTTTCCCACATCTGGGCTCTTATTTGCTTGTTTCTGCTTCATGATGAGGTTAACGTTACTAACTTCTTTTGGTTGTAGCGTGATAAATGGAATGTGTGTGTTTTGTCGAAATGGAATGCCTTATCTTTTTATTTTTTCCTTTTTCGTTAATGGGTTAAGGGCAGGGGTTCCGTTATAAATTAAATATGGTATACCCAACCCAAATCAGCATATTTTTTTGTTTTATGCCTAGTAATTCTTCTTCAGCCAGGCTTCGACAGAATGGGAAATCAAGTACAAGTATTAGTAGAATAGCAAAAATGTGTTCCTCGTTATTAATATGTTTACTTGCGGTAATTGTGACCTCTCGGGAGAATCGATGACTGCATCAAAGATGCACTTGCTAGTACTAGTACATCTGAAAATTCTTAATTGGCTAGTTGTTAGACCCAAAATGTGGAACAAAGGATTATCCCGTACCTACACCGAGGTATTGACGGTGATTCTCATTCTCAAATATCGCAAAACAGAATTTGATATGATGAGATAGAATGCAATAGAAACAAAGACACAGCCTCTTAATGCCCATTGCCCATCATTCTACAAGTTCTTTTCTTGTCAGGCATTACCATAGGGACCGTAATTCTCTAGTTAGAATCTTTTTTCTCAAGAAATTTGCCCGGACTTTCGCATATTATTGCGGTGCCCGTACATCTGTCTTCATGTGAATGATCTTCTACTCTTTCGTTTTCGATCAAGTAATGTTGGTATGTTTCAAGTGACTGCATATCTGGACTGAAGGAAACTTGTTTCACCTCATCACTATATAATGACCCCTTTTGCACTTCTTTCCAGATTAGAACATTGTTTGTTATTCGTAAATAAACAACAAAAACTATATCTCTTCCTTGTTTCTCATTTTATGGTTTCTTATTAGCTTCTCTAGAATTAACATATAATGGTTGTGATGATTACAAGGCTTCTTTGTTTTCAACTAAAATGAGCAATCAGTAGAGGATTTCTGTGAGCTAATTCCTCTTTTTAATACAGTTCACTTCTGGGCACCAACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAGAAACTTTCTTATCCTCAGCAAATAGGTATGTGTTCTATAGCAAAGGTCATTCAAACCATGTAAAGTTTGCACCTTCCCAGTTTTTCTCTCGCCTCTATCGCTTCACACTTGCACTCATATTGCAATATTGAGAAGTTTAGTAACTTAATTTCTGTTCCCTACTATTTTTGTTTGATTCTTGTGTTCGAATAATTCCTTTATTAACATTTTTTTTCGTCTTATCATATGCTTCCAGCTGTTACAGCCACTGGAATTATCTGGTCACGTTACAGCACCGTGATCACACCGGTAAGTTAAAGAAATGACATGACTAATGATTGATGAAACATAAAGTGATAATAGTGTGACCATATGAATGACCCATATTTTGTAAATATCACTATTACGAAGAGTGTTGGGCTTTCACCTCGTGTTGGTTTAATCTTTTTTTTCTTTCTTTCATTTCATTTTTAAACAATAGCATCCTCTTGATTAGTTCTTCTAGCCTGCTTAAGCTAAATGTTCTCGGAAGTGGCTTTGATAGCATTGAAGCATAAGACCTTGCCTTTGTCTTTTAACAAGAACCCACATAAGAAAGAGTGCAATCCTTGCTGTACTAAGTAGGGGAAGGATAGATTCATGTTGAAGCTTTGAAAGTTTTCCAGCATACATGGAGAGAAAAAGGACAGCTAGAGAAAGGATACCATCAGTTTCACTTGTGTTTAAGTTTTGTTTAGTTTTTAATTTGATTCTAGGTGTGGCCATTTGAATCGGGAATTGCTATGAACTTTATCATAGTTCTTGAGACCACCTTTTAGAATGGTCTGCAAAAAAAACCTTTGCCTTCTTGGGAGATCTTGCTCTCCATAAAGCTTCGAGGATTCACCAGGGAGATTACTGGTGCCACTATGAAGTCGAAAAGAAAACTTGCAAGAATAGGCATTTGATTTATCAAGAATCCTAACCCTTCTATCTTCATTAATGGTGAGAAGGCCACCATAAATTTTCTCCATCAGTTCCAGCCAATCTTTCCACCTTCTAATCCAAAAGATTCCTCCCAAGTTCTCAAAAGTCCGAGTGGTTGGTCTTTACGATCTGTTCCCTCCTGATAGAAGTCTTTCAATTGCTTATCTGGGTATTACCAAGGGCTTTAAAAGTTCCTCATGAGAGAAGGTCCATTATCCAGGTCTCTGGAAGGAATTCCATCTATCCTCTTAACATGGTGAAGACAGAAGGATGCTTCAATCAGCAGTTTCCAAAATCGAAGGAGAAGGATAGGGAAGCAATCCGTTGTCATTCTATCTAGCCGGTTCACTTTATCATCACAGTATTTCCCCACCCATTCCTTACAGATGAGAAATTGGTCATGCATACATGGCTGCACTTCTGACATTTGAACTTGTAAAACGCTCATTTCTAGGACAGAGATCAATGAGAGGTAGATCATTAATCACTCGGTAAATTTTGTGATGGTGGAGGAGGTGCTTTTCCCCACCCATTATGCTTAGTACTATCCTGAAACATTGAAATCACCACCTATGACCAAGTCACAGGAACAGAGGCTACCAGGTCTTCCAACCCTTGCCAAAAAAACGACACCTCTTCGATATGAAAAAAATGATGAATCCAACCAATTAAAATAAATACCTTCCAAACCTTTATCAAGAAATGTCCAGGCTTCTTGAACTCCAGATAACTTAATATAGGGCTTGTTCTACAAACAGCCACAATTTGGCTTTCTTGCAGTAATACAAGTCTGGATTTTACCCTCCCATATCGAAGTGTTGATCAAGCATCCATTCTTACCGTTGCTTCAAGCCTTCTTAACATTCCAACTTAAGATTCTCGTTGATTATTTCTCTTTTTAGTGTCACTCATCATAACAATTGTTTAAGGGAGCTCATTTAAGGAGTTTGTAACAGCCCAAGCCCACCGTTGGCAGATATTGTCCTCTTTGGATTTTTCCTTTCGGACTTCCCCTCAAGGTTCTTAAAACATATCTGCTAGTGAAAAGTTTTCACACCCTTATAAAGGGTGTTTCGTTCTCCCCTCAACCGATGTGGGATCTCAAAGTCCACCTCCCTTCGAGGTCCAGCATCCTCGCTGGCACTCGTTCCTTTCTCTAATCAATGTAGGACCCCCTCCAAATCTACCCCAATTTGGGGGCCAGCATCCTTGTTGGCACATTGCCTCATGCCCACCCCCTTCGGGAGCCTCCTCACTGGCTCATCTCTCGGTGTCTAGCTCTGATACCATTTGTAACAGTTCAAACCCACCGCTAACAAATATTGTCTTCTTTCAGCTTTCTCTTTTGGGAAATATCTTGGTTGAACCATGGAAGTATTAACTGTAGAATTGTGTATTCCTAAGTATCTCTCTCGGCTAAACTAGACATTTAACTATTTAGCAGACGGACCATCATGTCTTTAATAAATCCCTTTCTTAAACCTTCCTTCCAAGTACCTTGTCCAGCTAAACTAATTTGACGAATTAACATATTAATGTACCTTAAATTATATCTTAGCTAATGGCTACACTTTTCGGAAAATGCAGAAGAACTGGAACCTTTTTAGCGTCAATGTTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGTACGTCGTCGCTTCCGTAGGCTCGTAAAGAAAAAAATACTGCATGGTCCTTGTGGGACGTGGGGATTTCATTGTGATCTAAAGTCTAGGATAAACAAAACGATCTTATGAAAAATAAACAACATGCCAAGATTATTATTACCTTAAACTTTGCATAGTTCTTCATTCATCGTAGATGGCCGACTAATTCAACATTTCATTTGCAAATGTTCCAGGCACGATTATTTCTCAAAGGAGGAAGTGGCTGCTATCGAAGAATGATGACGAAATATTACATTATTTGCCTCTGTGATCACCTGAATTTCCCTTACGTCCATGTGTTGCCTCTTCCAAATCTTACCTAGAAAGCGCTACCTGAATTCCCTTTTTTATTACAAATCCATTCATACCCTTTATTTTACTTTTGTACTTTTGTAGCCATGAAACTGAAACTGTTTGGAAAAATATACGAGATCTTGATTTATGCAACATCTTCTATGAAACTGTAACCTCCCAAACACACCGCTAGCAGATAATGTTTTCTTTAGACTTTTACTTTCACGTTTTCCCTCGAAACTTTAAAATGTATTTGTTAAAGAAAAGTTT

mRNA sequence

TCTCATCTCATCTCATCTCAATCACCATCATATATTAAAACAACAATGCGGTCAGCCATTGACTTGCTTCGCCGCCTCCATTTATCTTAAGCCCATTCGCCATAAATCCAAGCTGGTGGAAGGGCATTTGAGCACGAGGAATAGGATAAAGCACGAGAGTATTTATGGCGGCGTCGAAGCTCCAAGCCTTCTGGAACCATCCTGCTGGCCCTAAAACCATTCACTTCTGGGCACCAACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAGAAACTTTCTTATCCTCAGCAAATAGCTGTTACAGCCACTGGAATTATCTGGTCACGTTACAGCACCGTGATCACACCGAAGAACTGGAACCTTTTTAGCGTCAATGTTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGCACGATTATTTCTCAAAGGAGGAAGTGGCTGCTATCGAAGAATGATGACGAAATATTACATTATTTGCCTCTGTGATCACCTGAATTTCCCTTACGTCCATGTGTTGCCTCTTCCAAATCTTACCTAGAAAGCGCTACCTGAATTCCCTTTTTTATTACAAATCCATTCATACCCTTTATTTTACTTTTGTACTTTTGTAGCCATGAAACTGAAACTGTTTGGAAAAATATACGAGATCTTGATTTATGCAACATCTTCTATGAAACTGTAACCTCCCAAACACACCGCTAGCAGATAATGTTTTCTTTAGACTTTTACTTTCACGTTTTCCCTCGAAACTTTAAAATGTATTTGTTAAAGAAAAGTTT

Coding sequence (CDS)

ATGGCGGCGTCGAAGCTCCAAGCCTTCTGGAACCATCCTGCTGGCCCTAAAACCATTCACTTCTGGGCACCAACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAGAAACTTTCTTATCCTCAGCAAATAGCTGTTACAGCCACTGGAATTATCTGGTCACGTTACAGCACCGTGATCACACCGAAGAACTGGAACCTTTTTAGCGTCAATGTTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAATACAGCACGATTATTTCTCAAAGGAGGAAGTGGCTGCTATCGAAGAATGA

Protein sequence

MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE

Homology

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BLAST of CmaCh18G005800 vs. Swiss-Prot
Match: MPC4_ARATH (Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TG+IW
Sbjct: 1   MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYS VI PKNWNLFSVNVAMAGTGIYQL RKI+HDY ++ E A   E
Sbjct: 61  SRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE 108

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BLAST of CmaCh18G005800 vs. Swiss-Prot
Match: MPC2_ARATH (Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana GN=MPC2 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.5e-47
Identity = 86/104 (82.69%), Postives = 92/104 (88.46%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF KPPE +SY QQIAVT TG+IW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPENISYLQQIAVTCTGMIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVA 105
            R ST+ITPKNWNLFSVNVAMA TGIYQLTRKI++DY S+ E A
Sbjct: 61  CRCSTIITPKNWNLFSVNVAMAATGIYQLTRKIKYDYVSEAEAA 104

[Close]

BLAST of CmaCh18G005800 vs. Swiss-Prot
Match: MPC3_ARATH (Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana GN=MPC3 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.5e-47
Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
          MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF KPPE LSYPQQI +T TG++W
Sbjct: 1  MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIVITGTGLVW 60

Query: 61 SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDY 98
          SRYSTVITPKNWNLFSV++ MA TGIYQLTRKI+HDY
Sbjct: 61 SRYSTVITPKNWNLFSVSLGMAVTGIYQLTRKIKHDY 97

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BLAST of CmaCh18G005800 vs. Swiss-Prot
Match: MPC2_HUMAN (Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-24
Identity = 49/91 (53.85%), Postives = 61/91 (67.03%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           M   KL+  +NHPAGP+T+ FWAP  KWG+  A +AD ++P EKLS  Q   + ATG IW
Sbjct: 23  MLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSAVLMATGFIW 82

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTR 92
           SRYS VI PKNW+LF+VN  +   G  QL R
Sbjct: 83  SRYSLVIIPKNWSLFAVNFFVGAAGASQLFR 113

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BLAST of CmaCh18G005800 vs. Swiss-Prot
Match: MPC2_MOUSE (Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.1e-24
Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 1


Query: 5   KLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYS 64
           KL+  +NHPAGP+T+ FWAP  KWG+  A +AD ++P EKLS  Q   + ATG IWSRYS
Sbjct: 27  KLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYS 86

Query: 65  TVITPKNWNLFSVNVAMAGTGIYQLTR 92
            VI PKNW+LF+VN  +   G  QL R
Sbjct: 87  LVIIPKNWSLFAVNFFVGSAGASQLFR 113

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BLAST of CmaCh18G005800 vs. TrEMBL
Match: A0A0A0LTI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195220 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 6.6e-55
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQA WNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEK+SYPQQIAVTATG+IW
Sbjct: 1   MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKISYPQQIAVTATGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYSTVITPKNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVA  +E
Sbjct: 61  SRYSTVITPKNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 108

[Close]

BLAST of CmaCh18G005800 vs. TrEMBL
Match: A0A124SET7_CYNCS (Uncharacterized protein family UPF0041 OS=Cynara cardunculus var. scolymus GN=Ccrd_020623 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 8.1e-53
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVTATGIIW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTATGIIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYSTVITPKNWNLFSVNVAMAGTG+YQL+RKI+HDYF++EE A+I+E
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGLYQLSRKIRHDYFNEEETASIKE 108

[Close]

BLAST of CmaCh18G005800 vs. TrEMBL
Match: W9QM82_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013619 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.0e-52
Identity = 97/108 (89.81%), Postives = 101/108 (93.52%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQA WNHPAGPKTIHFWAPTFKWGISIAN+ADFSKPPEKLSYPQQIAVT TG+IW
Sbjct: 1   MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANVADFSKPPEKLSYPQQIAVTCTGLIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYSTVITPKNWNLFSVNVAMA TGIYQLTRKIQHDYF +EE A  +E
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMATTGIYQLTRKIQHDYFPEEEAAVAKE 108

[Close]

BLAST of CmaCh18G005800 vs. TrEMBL
Match: B9RXD3_RICCO (Brain protein, putative OS=Ricinus communis GN=RCOM_0902800 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.0e-52
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVTATG+IW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTATGLIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYSTVITPKNWNLFSVNVAMA TG+YQL+RK+QHDYFS+ E AA++E
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAATGLYQLSRKVQHDYFSEAEAAAVKE 108

[Close]

BLAST of CmaCh18G005800 vs. TrEMBL
Match: A0A0D2SV86_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G185900 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.2e-52
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA+SKLQA WNHPAGPKTIHFWAPTFKWGISIAN+ADF+KPPEKLSYPQQIAVTATGIIW
Sbjct: 1   MASSKLQALWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKLSYPQQIAVTATGIIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYSTVITPKNWNLFSVN+AMAGTGIYQLTRKI+HDYFS+ E A   E
Sbjct: 61  SRYSTVITPKNWNLFSVNIAMAGTGIYQLTRKIKHDYFSEAEPAVASE 108

[Close]

BLAST of CmaCh18G005800 vs. TAIR10
Match: AT4G22310.1 (AT4G22310.1 Uncharacterised protein family (UPF0041))

HSP 1 Score: 199.5 bits (506), Expect = 1.0e-51
Identity = 91/108 (84.26%), Postives = 96/108 (88.89%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TG+IW
Sbjct: 1   MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYS VI PKNWNLFSVNVAMAGTGIYQL RKI+HDY ++ E A   E
Sbjct: 61  SRYSMVINPKNWNLFSVNVAMAGTGIYQLARKIKHDYATEAEPAVASE 108

[Close]

BLAST of CmaCh18G005800 vs. TAIR10
Match: AT4G14695.1 (AT4G14695.1 Uncharacterised protein family (UPF0041))

HSP 1 Score: 189.1 bits (479), Expect = 1.4e-48
Identity = 86/104 (82.69%), Postives = 92/104 (88.46%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF KPPE +SY QQIAVT TG+IW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPENISYLQQIAVTCTGMIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVA 105
            R ST+ITPKNWNLFSVNVAMA TGIYQLTRKI++DY S+ E A
Sbjct: 61  CRCSTIITPKNWNLFSVNVAMAATGIYQLTRKIKYDYVSEAEAA 104

[Close]

BLAST of CmaCh18G005800 vs. TAIR10
Match: AT4G05590.2 (AT4G05590.2 Uncharacterised protein family UPF0041 (InterPro:IPR005336))

HSP 1 Score: 170.2 bits (430), Expect = 6.8e-43
Identity = 83/135 (61.48%), Postives = 89/135 (65.93%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAV------- 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF KPPE LSYPQQI +       
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIGIILTIGLS 60

Query: 61  -------------------------------TATGIIWSRYSTVITPKNWNLFSVNVAMA 98
                                          T TG++WSRYSTVITPKNWNLFSV++ MA
Sbjct: 61  YLYSAHIAVMYRCVNFNVYMMPRMAVIVSVITGTGLVWSRYSTVITPKNWNLFSVSLGMA 120

[Close]

BLAST of CmaCh18G005800 vs. TAIR10
Match: AT5G20090.1 (AT5G20090.1 Uncharacterised protein family (UPF0041))

HSP 1 Score: 80.1 bits (196), Expect = 9.2e-16
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1


Query: 1  MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
          MA S+ QAF N P GPKT HFW P   WG   A + D  KPPE +S     A+     ++
Sbjct: 1  MATSRFQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMSSAMCVYSALF 60

Query: 61 SRYSTVITPKNWNLFSVNVAMAGTGIYQLTR 92
           R++ ++ P+N+ L + + +     +YQL+R
Sbjct: 61 MRFAWMVQPRNYLLLACHASNETVQLYQLSR 91

[Close]

BLAST of CmaCh18G005800 vs. NCBI nr
Match: gi|778659839|ref|XP_011655152.1| (PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 9.5e-55
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQA WNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEK+SYPQQIAVTATG+IW
Sbjct: 1   MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKISYPQQIAVTATGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYSTVITPKNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVA  +E
Sbjct: 61  SRYSTVITPKNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAVAKE 108

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BLAST of CmaCh18G005800 vs. NCBI nr
Match: gi|659118141|ref|XP_008458967.1| (PREDICTED: mitochondrial pyruvate carrier 2 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 9.5e-55
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEK+SYPQQIAVTATG+IW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKISYPQQIAVTATGVIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYSTVITPKNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVAA +E
Sbjct: 61  SRYSTVITPKNWNLFSVNIAMAGTGIYQLTRKIQHDYFSKEEVAAAKE 108

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BLAST of CmaCh18G005800 vs. NCBI nr
Match: gi|719989321|ref|XP_010252602.1| (PREDICTED: mitochondrial pyruvate carrier 2-like [Nelumbo nucifera])

HSP 1 Score: 216.9 bits (551), Expect = 1.8e-53
Identity = 99/108 (91.67%), Postives = 104/108 (96.30%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQA WNHPAGPKTIHFWAPTFKWGISIAN+ADFSKPPEKLSYPQQIAVT TG+IW
Sbjct: 1   MAASKLQALWNHPAGPKTIHFWAPTFKWGISIANVADFSKPPEKLSYPQQIAVTCTGLIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYSTVITPKNWNLFSVNVAMAGTG+YQLTRKIQHDYFS+ EVAA +E
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGLYQLTRKIQHDYFSETEVAATKE 108

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BLAST of CmaCh18G005800 vs. NCBI nr
Match: gi|976915124|gb|KVI01096.1| (Uncharacterized protein family UPF0041 [Cynara cardunculus var. scolymus])

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-52
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MA SKLQA WNHPAGPKTIHFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVTATGIIW
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTATGIIW 60

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYSTVITPKNWNLFSVNVAMAGTG+YQL+RKI+HDYF++EE A+I+E
Sbjct: 61  SRYSTVITPKNWNLFSVNVAMAGTGLYQLSRKIRHDYFNEEETASIKE 108

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BLAST of CmaCh18G005800 vs. NCBI nr
Match: gi|731436974|ref|XP_010647247.1| (PREDICTED: uncharacterized protein LOC100247570 [Vitis vinifera])

HSP 1 Score: 212.6 bits (540), Expect = 3.4e-52
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 1


Query: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIW 60
           MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIAN+ADF+KPPEKLSYPQQIAVT TG+IW
Sbjct: 109 MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANVADFAKPPEKLSYPQQIAVTCTGVIW 168

Query: 61  SRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAIEE 109
           SRYSTVITPKNWNLFSVNVAMAGTGIYQL+RKI+HDYF + E A  EE
Sbjct: 169 SRYSTVITPKNWNLFSVNVAMAGTGIYQLSRKIKHDYFPEPEAAVAEE 216

The following BLAST results are available for this feature:

BLAST of CmaCh18G005800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MPC4_ARATH	1.8e-50	84.26	Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1	[more]
MPC2_ARATH	2.5e-47	82.69	Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana GN=MPC2 PE=3 SV=1	[more]
MPC3_ARATH	2.5e-47	85.57	Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana GN=MPC3 PE=2 SV=1	[more]
MPC2_HUMAN	2.3e-24	53.85	Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1	[more]
MPC2_MOUSE	5.1e-24	55.17	Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1	[more]

BLAST of CmaCh18G005800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTI1_CUCSA	6.6e-55	93.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195220 PE=4 SV=1	[more]
A0A124SET7_CYNCS	8.1e-53	89.81	Uncharacterized protein family UPF0041 OS=Cynara cardunculus var. scolymus GN=Cc...	[more]
W9QM82_9ROSA	4.0e-52	89.81	Uncharacterized protein OS=Morus notabilis GN=L484_013619 PE=4 SV=1	[more]
B9RXD3_RICCO	4.0e-52	87.96	Brain protein, putative OS=Ricinus communis GN=RCOM_0902800 PE=4 SV=1	[more]
A0A0D2SV86_GOSRA	5.2e-52	88.89	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G185900 PE=4 SV=1	[more]

BLAST of CmaCh18G005800 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22310.1	1.0e-51	84.26	Uncharacterised protein family (UPF0041)	[more]
AT4G14695.1	1.4e-48	82.69	Uncharacterised protein family (UPF0041)	[more]
AT4G05590.2	6.8e-43	61.48	Uncharacterised protein family UPF0041 (InterPro:IPR005336)	[more]
AT5G20090.1	9.2e-16	37.36	Uncharacterised protein family (UPF0041)	[more]

BLAST of CmaCh18G005800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778659839\|ref\|XP_011655152.1\|	9.5e-55	93.52	PREDICTED: mitochondrial pyruvate carrier 4 [Cucumis sativus]	[more]
gi\|659118141\|ref\|XP_008458967.1\|	9.5e-55	93.52	PREDICTED: mitochondrial pyruvate carrier 2 [Cucumis melo]	[more]
gi\|719989321\|ref\|XP_010252602.1\|	1.8e-53	91.67	PREDICTED: mitochondrial pyruvate carrier 2-like [Nelumbo nucifera]	[more]
gi\|976915124\|gb\|KVI01096.1\|	1.2e-52	89.81	Uncharacterized protein family UPF0041 [Cynara cardunculus var. scolymus]	[more]
gi\|731436974\|ref\|XP_010647247.1\|	3.4e-52	88.89	PREDICTED: uncharacterized protein LOC100247570 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005336	MPC

Vocabulary: **Cellular Component**
Term	Definition
GO:0005743	mitochondrial inner membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006850	mitochondrial pyruvate transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006850	mitochondrial pyruvate transport
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G005800.1	CmaCh18G005800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005336	Mitochondrial pyruvate carrier	PFAM	PF03650	MPC	coord: 6..104 score: 5.4
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 1..108 score: 3.0
None	No IPR available	PANTHER	PTHR14154:SF2	MITOCHONDRIAL PYRUVATE CARRIER 2	coord: 1..108 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G005800	MELO3C021698	Melon (DHL92) v3.5.1	cmameB358
CmaCh18G005800	ClCG01G010020	Watermelon (Charleston Gray)	cmawcgB350
CmaCh18G005800	CmoCh18G005710	Cucurbita moschata (Rifu)	cmacmoB412
CmaCh18G005800	Lsi02G010920	Bottle gourd (USVL1VR-Ls)	cmalsiB375
CmaCh18G005800	MELO3C021698.2	Melon (DHL92) v3.6.1	cmamedB416
CmaCh18G005800	Bhi08G000675	Wax gourd	cmawgoB0535

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G005800	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G005800	Cucurbita pepo (Zucchini)	cmacpeB419
CmaCh18G005800	Cucurbita pepo (Zucchini)	cmacpeB438
CmaCh18G005800	Cucurbita pepo (Zucchini)	cmacpeB448
CmaCh18G005800	Bottle gourd (USVL1VR-Ls)	cmalsiB367
CmaCh18G005800	Bottle gourd (USVL1VR-Ls)	cmalsiB369
CmaCh18G005800	Cucumber (Gy14) v2	cgybcmaB771
CmaCh18G005800	Melon (DHL92) v3.6.1	cmamedB414
CmaCh18G005800	Melon (DHL92) v3.6.1	cmamedB423
CmaCh18G005800	Silver-seed gourd	carcmaB0149
CmaCh18G005800	Silver-seed gourd	carcmaB0907
CmaCh18G005800	Cucumber (Chinese Long) v3	cmacucB0509
CmaCh18G005800	Watermelon (97103) v2	cmawmbB402
CmaCh18G005800	Watermelon (97103) v2	cmawmbB394
CmaCh18G005800	Wax gourd	cmawgoB0515
CmaCh18G005800	Wax gourd	cmawgoB0532
CmaCh18G005800	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh18G005800	Cucurbita maxima (Rimu)	cmacmaB399
CmaCh18G005800	Cucumber (Gy14) v1	cgycmaB0040
CmaCh18G005800	Cucumber (Gy14) v1	cgycmaB0914
CmaCh18G005800	Cucurbita moschata (Rifu)	cmacmoB398
CmaCh18G005800	Cucurbita moschata (Rifu)	cmacmoB407
CmaCh18G005800	Cucurbita moschata (Rifu)	cmacmoB419
CmaCh18G005800	Cucurbita moschata (Rifu)	cmacmoB428
CmaCh18G005800	Wild cucumber (PI 183967)	cmacpiB428
CmaCh18G005800	Wild cucumber (PI 183967)	cmacpiB404
CmaCh18G005800	Cucumber (Chinese Long) v2	cmacuB400
CmaCh18G005800	Cucumber (Chinese Long) v2	cmacuB425
CmaCh18G005800	Melon (DHL92) v3.5.1	cmameB364
CmaCh18G005800	Watermelon (Charleston Gray)	cmawcgB342
CmaCh18G005800	Watermelon (Charleston Gray)	cmawcgB349
CmaCh18G005800	Watermelon (97103) v1	cmawmB385
CmaCh18G005800	Watermelon (97103) v1	cmawmB389