Carg27656 (gene) Silver-seed gourd

NameCarg27656
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_206 : 52120 .. 54369 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCTACGTCTTCTGAAGCAAATCCATGCCTATTTCATTCTCTCATCTGGGTTCGACACGGTTTTCATTGCCTCCAAGCTCATTCGTCTGTACGTCAAGTTCAACGACCTTCCCAGTGCTGTCTCTGTTCTCAACGCCTTCCCGCACACCGAACCCATGCTTTGGAATTCCATCATCAAGTCCCAAGTTGACTCAGGTTTGTTCTTATCTGCCATTATGTTGTATAAAAACATGAGGGAGGTGGGAGTTGAGCATGATGGGTTCACGTTTCCGATTCTTAACCATGTCGTTATGTCGATTTGGGTTGATGTAGTCTATGCGGGAATGGTTCACTGTGTTGGAATTCGAATGGGGTTTGGTTCTGATTTGTATTTCTGTAATACCATGATGGAGGTTTATGCGAAATGTGAGTGTTTGGGTCATGCACGCAAAGTGTTTGATGAAATGCCTAATAGAGACTTGGTCTCTTGGACGTCCATGATTTCTGCATATGTTAATGTCGGTGATATTGTTTGTGCTTTGAATCTTTTTGAGGGAATGAGGAGGGTGTTGGAGCCGAATTCGGTGACCATGATGGCAATGCTGCAAGCTTGTTGTGTTACTGAGGATTTGGTTCTGGGAAGGCTGATTCAATGTCTTGTGGTTAAGAATGGTTTATTGTTTGATGTAGGTCTGCAGAATTGGTTCTTACGAATGTATAGTCGACTAGGTGGGGAAGATGAATTTGTACGTTTTTTCTCTGAAATTGATTGCAAGAATGTTGTTTCTTGGGATATTTTGATATCTTTTTACTCCTCCGTGGGGGATATTGTGAAAGCTGTAGATATCTTCAAACAAATCATGGCTGGTGAAGTTCCACTCATCATTGAGACATTAACCATACTTATATCAGCAACAAAGACATCTGATTCCATGTGTCTGATCCTAGGTGAAAATCTACACTCTCTGGCAATTAAAACTGGTCTCTATGATAGCATTCTGCGGACTTCATTGTTGGATATGTATGCCAAGTTTGGGGAGTTGGACAATTCAACTAGGCTATTTAACGAAATTCCTAATAGGAGCATCATTACTTGGGGGGCCATGATGTCTAGTTTTATTCAAAATGGACACTTTGATGAGGCAGTAGAGATCTTCAGCCAAATGCAAGCTGCTGGCTTGAAACCCAGCCTTGGAATTTTGAAACACTTAATTGATGCTTACGCCCACTTGGGTGCTCTGCAGCTGGGAAGAGGCATACATTGTTACCTCATCCGAATCTGTGGATTGGAGATATGTAATACCCACTTAGAAACGTCTCTTATGAACATGTATGTAAGATGTGGAAGCATTGCTTCTGCTAGAAAATGTTTTGATTTGATCATAGTTAAAGATGTTGTGGCGTGGACGTCCATGATTGAGGGATATGGCGCTCACGGACAAGGTATCAATGCCCTCAATCTATATCACCATATGATGAGTGAAGAAGTGGCCCCAAATAGTGTCACGTTCTTGAGTCTGCTATCTGCTTGTAGCCACTCTGGCCTTGTAAGTGAGGGCTGTGAAATCTTTTATTCAATGAGGTCAAGGTTCAATATTAAGCCTGATTTAGAGCATTACACTTGTTTTGTTGATCTTTTAAGTAGATCAACAAGAGTAAGAGAGGCCTTTGCGATTATATTGAGAATGACAAATCTCTGTGATGGTAGGATTTGGGGTGCTCTTATGGGTGCCTGCCGGGTGTATGGAGACAATAAAATCGCTATCTATGCTGCACACAGGCTTCTTGAATTAGAACCTGATAATGTAGGCTATTATACTCTGTTGAGCAATACACAGGCTAGTGTTGGGCAGTGGCATGAAGTTGAAAAACTACGTAGTGTTGTGTATGAGAAGGATCTTGTCAAGAAACCAGGTTGGAGCTTCATTGAGTTAAATGGAATCATTCATGGGTTTGTTTCAGGAGATAGATCACACAGCAAGACCGATCAGATTTATGATCTATTGGTATATCTTAATACGATAGAATAGGGAAAGGGGCCTGAGGTTCCACATCGGTTGGGGAGGTTAGTGGTGACCTTGGGCTGTTATAAATGGTATTCAAGTCAGACACTAGGCGACGTGCGACGTACAAGCGAGCAGGCTGAGCCTCGAATGGGGTTGTACACGAGGCGGTGTGTCAGCAAGGATGCTAGGCCCCGAAGGAGAGTGGATTATGAGATGTCACATCGGTTGGGGAGGAGAATCGAAGCGTTCTTTATAAGGGTGTGA

mRNA sequence

GATCTACGTCTTCTGAAGCAAATCCATGCCTATTTCATTCTCTCATCTGGGTTCGACACGGTTTTCATTGCCTCCAAGCTCATTCGTCTGTACGTCAAGTTCAACGACCTTCCCAGTGCTGTCTCTGTTCTCAACGCCTTCCCGCACACCGAACCCATGCTTTGGAATTCCATCATCAAGTCCCAAGTTGACTCAGGTTTGTTCTTATCTGCCATTATGTTGTATAAAAACATGAGGGAGGTGGGAGTTGAGCATGATGGGTTCACGTTTCCGATTCTTAACCATGTCGTTATGTCGATTTGGGTTGATGTAGTCTATGCGGGAATGGTTCACTGTGTTGGAATTCGAATGGGGTTTGGTTCTGATTTGTATTTCTGTAATACCATGATGGAGGTTTATGCGAAATGTGAGTGTTTGGGTCATGCACGCAAAGTGTTTGATGAAATGCCTAATAGAGACTTGGTCTCTTGGACGTCCATGATTTCTGCATATGTTAATGTCGGTGATATTGTTTGTGCTTTGAATCTTTTTGAGGGAATGAGGAGGGTGTTGGAGCCGAATTCGGTGACCATGATGGCAATGCTGCAAGCTTGTTGTGTTACTGAGGATTTGGTTCTGGGAAGGCTGATTCAATGTCTTGTGGTTAAGAATGGTTTATTGTTTGATGTAGGTCTGCAGAATTGGTTCTTACGAATGTATAGTCGACTAGGTGGGGAAGATGAATTTGTACGTTTTTTCTCTGAAATTGATTGCAAGAATGTTGTTTCTTGGGATATTTTGATATCTTTTTACTCCTCCGTGGGGGATATTGTGAAAGCTGTAGATATCTTCAAACAAATCATGGCTGGTGAAGTTCCACTCATCATTGAGACATTAACCATACTTATATCAGCAACAAAGACATCTGATTCCATGTGTCTGATCCTAGGTGAAAATCTACACTCTCTGGCAATTAAAACTGGTCTCTATGATAGCATTCTGCGGACTTCATTGTTGGATATGTATGCCAAGTTTGGGGAGTTGGACAATTCAACTAGGCTATTTAACGAAATTCCTAATAGGAGCATCATTACTTGGGGGGCCATGATGTCTAGTTTTATTCAAAATGGACACTTTGATGAGGCAGTAGAGATCTTCAGCCAAATGCAAGCTGCTGGCTTGAAACCCAGCCTTGGAATTTTGAAACACTTAATTGATGCTTACGCCCACTTGGGTGCTCTGCAGCTGGGAAGAGGCATACATTGTTACCTCATCCGAATCTGTGGATTGGAGATATGTAATACCCACTTAGAAACGTCTCTTATGAACATGTATGTAAGATGTGGAAGCATTGCTTCTGCTAGAAAATGTTTTGATTTGATCATAGTTAAAGATGTTGTGGCGTGGACGTCCATGATTGAGGGATATGGCGCTCACGGACAAGGTATCAATGCCCTCAATCTATATCACCATATGATGAGTGAAGAAGTGGCCCCAAATAGTGTCACGTTCTTGAGTCTGCTATCTGCTTGTAGCCACTCTGGCCTTGTAAGTGAGGGCTGTGAAATCTTTTATTCAATGAGGTCAAGGTTCAATATTAAGCCTGATTTAGAGCATTACACTTGTTTTGTTGATCTTTTAAGTAGATCAACAAGAGTAAGAGAGGCCTTTGCGATTATATTGAGAATGACAAATCTCTGTGATGGTAGGATTTGGGGTGCTCTTATGGGTGCCTGCCGGGTGTATGGAGACAATAAAATCGCTATCTATGCTGCACACAGGCTTCTTGAATTAGAACCTGATAATGTAGGCTATTATACTCTGTTGAGCAATACACAGGCTAGTGTTGGGCAGTGGCATGAAGTTGAAAAACTACGTAGTGTTGTGTATGAGAAGGATCTTGTCAAGAAACCAGGTTGGAGCTTCATTGAGTTAAATGGAATCATTCATGGGTTTGTTTCAGGAGATAGATCACACAGCAAGACCGATCAGATTTATGATCTATTGACACTAGGCGACGTGCGACGTACAAGCGAGCAGGCTGAGCCTCGAATGGGGTTGTACACGAGGCGGTGTGTCAGCAAGGATGCTAGGCCCCGAAGGAGAGTGGATTATGAGATGTCACATCGGTTGGGGAGGAGAATCGAAGCGTTCTTTATAAGGGTGTGA

Coding sequence (CDS)

GATCTACGTCTTCTGAAGCAAATCCATGCCTATTTCATTCTCTCATCTGGGTTCGACACGGTTTTCATTGCCTCCAAGCTCATTCGTCTGTACGTCAAGTTCAACGACCTTCCCAGTGCTGTCTCTGTTCTCAACGCCTTCCCGCACACCGAACCCATGCTTTGGAATTCCATCATCAAGTCCCAAGTTGACTCAGGTTTGTTCTTATCTGCCATTATGTTGTATAAAAACATGAGGGAGGTGGGAGTTGAGCATGATGGGTTCACGTTTCCGATTCTTAACCATGTCGTTATGTCGATTTGGGTTGATGTAGTCTATGCGGGAATGGTTCACTGTGTTGGAATTCGAATGGGGTTTGGTTCTGATTTGTATTTCTGTAATACCATGATGGAGGTTTATGCGAAATGTGAGTGTTTGGGTCATGCACGCAAAGTGTTTGATGAAATGCCTAATAGAGACTTGGTCTCTTGGACGTCCATGATTTCTGCATATGTTAATGTCGGTGATATTGTTTGTGCTTTGAATCTTTTTGAGGGAATGAGGAGGGTGTTGGAGCCGAATTCGGTGACCATGATGGCAATGCTGCAAGCTTGTTGTGTTACTGAGGATTTGGTTCTGGGAAGGCTGATTCAATGTCTTGTGGTTAAGAATGGTTTATTGTTTGATGTAGGTCTGCAGAATTGGTTCTTACGAATGTATAGTCGACTAGGTGGGGAAGATGAATTTGTACGTTTTTTCTCTGAAATTGATTGCAAGAATGTTGTTTCTTGGGATATTTTGATATCTTTTTACTCCTCCGTGGGGGATATTGTGAAAGCTGTAGATATCTTCAAACAAATCATGGCTGGTGAAGTTCCACTCATCATTGAGACATTAACCATACTTATATCAGCAACAAAGACATCTGATTCCATGTGTCTGATCCTAGGTGAAAATCTACACTCTCTGGCAATTAAAACTGGTCTCTATGATAGCATTCTGCGGACTTCATTGTTGGATATGTATGCCAAGTTTGGGGAGTTGGACAATTCAACTAGGCTATTTAACGAAATTCCTAATAGGAGCATCATTACTTGGGGGGCCATGATGTCTAGTTTTATTCAAAATGGACACTTTGATGAGGCAGTAGAGATCTTCAGCCAAATGCAAGCTGCTGGCTTGAAACCCAGCCTTGGAATTTTGAAACACTTAATTGATGCTTACGCCCACTTGGGTGCTCTGCAGCTGGGAAGAGGCATACATTGTTACCTCATCCGAATCTGTGGATTGGAGATATGTAATACCCACTTAGAAACGTCTCTTATGAACATGTATGTAAGATGTGGAAGCATTGCTTCTGCTAGAAAATGTTTTGATTTGATCATAGTTAAAGATGTTGTGGCGTGGACGTCCATGATTGAGGGATATGGCGCTCACGGACAAGGTATCAATGCCCTCAATCTATATCACCATATGATGAGTGAAGAAGTGGCCCCAAATAGTGTCACGTTCTTGAGTCTGCTATCTGCTTGTAGCCACTCTGGCCTTGTAAGTGAGGGCTGTGAAATCTTTTATTCAATGAGGTCAAGGTTCAATATTAAGCCTGATTTAGAGCATTACACTTGTTTTGTTGATCTTTTAAGTAGATCAACAAGAGTAAGAGAGGCCTTTGCGATTATATTGAGAATGACAAATCTCTGTGATGGTAGGATTTGGGGTGCTCTTATGGGTGCCTGCCGGGTGTATGGAGACAATAAAATCGCTATCTATGCTGCACACAGGCTTCTTGAATTAGAACCTGATAATGTAGGCTATTATACTCTGTTGAGCAATACACAGGCTAGTGTTGGGCAGTGGCATGAAGTTGAAAAACTACGTAGTGTTGTGTATGAGAAGGATCTTGTCAAGAAACCAGGTTGGAGCTTCATTGAGTTAAATGGAATCATTCATGGGTTTGTTTCAGGAGATAGATCACACAGCAAGACCGATCAGATTTATGATCTATTGACACTAGGCGACGTGCGACGTACAAGCGAGCAGGCTGAGCCTCGAATGGGGTTGTACACGAGGCGGTGTGTCAGCAAGGATGCTAGGCCCCGAAGGAGAGTGGATTATGAGATGTCACATCGGTTGGGGAGGAGAATCGAAGCGTTCTTTATAAGGGTGTGA

Protein sequence

DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLLTLGDVRRTSEQAEPRMGLYTRRCVSKDARPRRRVDYEMSHRLGRRIEAFFIRV
BLAST of Carg27656 vs. NCBI nr
Match: XP_023526509.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1312.0 bits (3394), Expect = 0.0e+00
Identity = 651/662 (98.34%), Postives = 653/662 (98.64%), Query Frame = 0

Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK 60
           DLRLLKQIHAYFILSSGFDTVFIASKLIRLY KFNDLPSAVSVLNAFPHTEPMLWNSIIK
Sbjct: 13  DLRLLKQIHAYFILSSGFDTVFIASKLIRLYAKFNDLPSAVSVLNAFPHTEPMLWNSIIK 72

Query: 61  SQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG 120
           SQ DSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG
Sbjct: 73  SQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG 132

Query: 121 SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM 180
           SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVN GDIVCALNLFEGM
Sbjct: 133 SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNSGDIVCALNLFEGM 192

Query: 181 RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED 240
           RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED
Sbjct: 193 RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED 252

Query: 241 EFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATK 300
           EFV FFSEIDCKNVVSW+ILISFYSSVGDIVKAVDIFKQIM GEVPLIIETLTILISATK
Sbjct: 253 EFVCFFSEIDCKNVVSWNILISFYSSVGDIVKAVDIFKQIMGGEVPLIIETLTILISATK 312

Query: 301 TSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG 360
           TS+SMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG
Sbjct: 313 TSESMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG 372

Query: 361 AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRI 420
           AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRI
Sbjct: 373 AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRI 432

Query: 421 CGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALN 480
            GLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALN
Sbjct: 433 YGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALN 492

Query: 481 LYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLL 540
           LYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLL
Sbjct: 493 LYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLL 552

Query: 541 SRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYT 600
           SRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGD KIAIYAAHRLLELEPDNVGYYT
Sbjct: 553 SRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDTKIAIYAAHRLLELEPDNVGYYT 612

Query: 601 LLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYD 660
           LLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNG IHGFVSGDRSH KTDQIYD
Sbjct: 613 LLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHGKTDQIYD 672

Query: 661 LL 663
           LL
Sbjct: 673 LL 674

BLAST of Carg27656 vs. NCBI nr
Match: XP_022932989.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1219.9 bits (3155), Expect = 0.0e+00
Identity = 601/610 (98.52%), Postives = 604/610 (99.02%), Query Frame = 0

Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWNSIIKSQ DSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC
Sbjct: 1   MLWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC
Sbjct: 61  VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
           ALNLFEGMRRV EPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM
Sbjct: 121 ALNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL
Sbjct: 181 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP
Sbjct: 241 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
           NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHCYLIRI GLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG+H
Sbjct: 361 IHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGSH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH
Sbjct: 421 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKD VKKPGWSF+ELNG +HGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            KTDQIYDLL
Sbjct: 601 CKTDQIYDLL 610

BLAST of Carg27656 vs. NCBI nr
Match: XP_022967941.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1195.6 bits (3092), Expect = 0.0e+00
Identity = 593/610 (97.21%), Postives = 599/610 (98.20%), Query Frame = 0

Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWNSIIKSQ DSGLF SAIMLYKNMREVGVEHDGFTFPILNHVVMSI VDVVYAGMVHC
Sbjct: 1   MLWNSIIKSQFDSGLFQSAIMLYKNMREVGVEHDGFTFPILNHVVMSICVDVVYAGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVN G IVC
Sbjct: 61  VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNSGVIVC 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
           ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM
Sbjct: 121 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           YSRLGGEDEFVR FSEIDCKNVVSW+ILISFY SVGDIVKAVDIFKQIM+GEVPLII+TL
Sbjct: 181 YSRLGGEDEFVRVFSEIDCKNVVSWNILISFYFSVGDIVKAVDIFKQIMSGEVPLIIDTL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TILISATKTS+SMCLILGENLHSLAIKTGLYDSILRTSLLDMYAK GELDNSTRLFNEIP
Sbjct: 241 TILISATKTSESMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKIGELDNSTRLFNEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
           NRSIITWGAMMSSFIQNGHFDEAV+IFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDEAVDIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHCYLIRI GLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH
Sbjct: 361 IHCYLIRIHGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH
Sbjct: 421 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEK+LVKKPGWSFIELNG IHGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKNLVKKPGWSFIELNGTIHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            KTDQIYDLL
Sbjct: 601 CKTDQIYDLL 610

BLAST of Carg27656 vs. NCBI nr
Match: XP_008457591.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_008457593.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902177.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902178.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902179.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902180.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo])

HSP 1 Score: 1052.4 bits (2720), Expect = 7.1e-304
Identity = 516/610 (84.59%), Postives = 556/610 (91.15%), Query Frame = 0

Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWN++IKS  DSGLF SA++LYKNMREV VEHDGFT PI+N V++SIWVDVVY GMVHC
Sbjct: 1   MLWNNVIKSHFDSGLFHSALLLYKNMREVRVEHDGFTLPIVNQVILSIWVDVVYGGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGF SDLYFCNTMMEVY KC CL  AR VFDEMPNRDLVSWTSMISAYV  GD+ C
Sbjct: 61  VGIRMGFSSDLYFCNTMMEVYGKCGCLVSARDVFDEMPNRDLVSWTSMISAYVKGGDVFC 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
           AL++FEGMRR LEPNSVT++ MLQACC T++LVLGRL+QC VVKNGLLFD GLQN FLRM
Sbjct: 121 ALDIFEGMRRELEPNSVTVIVMLQACCATQNLVLGRLLQCYVVKNGLLFDTGLQNSFLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           YSRLGGEDE V FFSEID KNVVSW+IL+SFYSS+GDIVK VDI  +IM GEVPL IETL
Sbjct: 181 YSRLGGEDEVVAFFSEIDFKNVVSWNILMSFYSSMGDIVKVVDILNKIM-GEVPLSIETL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TILIS   TSDS CLILGENLHSLAIK+GLYD IL TSLLDMYAKFGEL+NSTRLF EIP
Sbjct: 241 TILISGIATSDSGCLILGENLHSLAIKSGLYDDILCTSLLDMYAKFGELENSTRLFKEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
           NRSIITWGAMMSSFIQNGHFD+AV+IF QMQ AGLKPS+GILKHLIDAYA+LGALQLG+ 
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDDAVDIFKQMQVAGLKPSVGILKHLIDAYAYLGALQLGKA 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHC+LIRI GL +CNT LETS++NMYVRCGSIASARKCFDLI++KDVVAWTSMIEGYGAH
Sbjct: 361 IHCHLIRIYGLVVCNTRLETSVLNMYVRCGSIASARKCFDLILIKDVVAWTSMIEGYGAH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           G GI+ALNL+H M SEEV PN+VTFLSLLSACSHSGLVSEGC IFYSMRSRFNIKPDLEH
Sbjct: 421 GLGIDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCGIFYSMRSRFNIKPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIA YAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIANYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSN+QASVGQWHE EKLRS+VYEK+L KKPGWSFIELNG IHGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKNLAKKPGWSFIELNGTIHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            K ++IYDLL
Sbjct: 601 YKANEIYDLL 609

BLAST of Carg27656 vs. NCBI nr
Match: XP_022153922.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Momordica charantia])

HSP 1 Score: 995.0 bits (2571), Expect = 1.3e-286
Identity = 491/610 (80.49%), Postives = 539/610 (88.36%), Query Frame = 0

Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWNSIIKS V+SGLF+SA++LYK MRE+GVEHDGFTFP++N ++MSI +DVVYAGMVHC
Sbjct: 1   MLWNSIIKSHVESGLFVSALLLYKKMRELGVEHDGFTFPMVNRIIMSIQLDVVYAGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGFG+DLYFCNTMMEVY KC CL  AR VFDEMP+RDLVSWTSMIS YV  GD+V 
Sbjct: 61  VGIRMGFGADLYFCNTMMEVYGKCGCLVSARNVFDEMPHRDLVSWTSMISVYVCRGDVVS 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
            L+LFEGMRR LEPNSVT+M M+QACC T +L LGR +Q  V KNGLLFD+GLQN  LRM
Sbjct: 121 GLDLFEGMRRELEPNSVTIMVMVQACCATGNLSLGRQLQSHVFKNGLLFDIGLQNSLLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           Y+RLGGEDE   FFSE+D KNVVSW++ ISFYSS GD VK VDIF +IM GEV L +ETL
Sbjct: 181 YTRLGGEDEVGVFFSEVDRKNVVSWNVFISFYSSRGDFVKVVDIFNKIM-GEVLLSVETL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TIL+SAT   DS  LILG+NLHSLAIK+GLYD IL+TS LDMYAKFGEL+NSTRLF EIP
Sbjct: 241 TILVSATAAPDSEHLILGKNLHSLAIKSGLYDGILQTSFLDMYAKFGELENSTRLFKEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
            +SIITWGAMMSSFIQNGHFD AVEIF+QMQAAGLKPS+GILKHLIDAY HLG LQLG+ 
Sbjct: 301 RKSIITWGAMMSSFIQNGHFDGAVEIFNQMQAAGLKPSVGILKHLIDAYTHLGVLQLGKA 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHCYLIR+ GLEI NT L TS++NMYVRCGS+ SA KCFDLI++KDVVAWTSMIEGYGAH
Sbjct: 361 IHCYLIRLNGLEIYNTQLGTSILNMYVRCGSLVSAIKCFDLILIKDVVAWTSMIEGYGAH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           G G +ALNL+  MM EEV PN+VTFLSLLSACSHSGLVSEGC+IFYSMRSRFNI PDLEH
Sbjct: 421 GLGFDALNLFLQMMREEVTPNNVTFLSLLSACSHSGLVSEGCQIFYSMRSRFNINPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTN  DGRIWGALMGACRVY DNKIA YAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNFRDGRIWGALMGACRVYEDNKIANYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSN QA+VGQWH+VEKLRSVVYEKDLVKKPGWSFIEL GI+HGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNAQATVGQWHDVEKLRSVVYEKDLVKKPGWSFIELKGIVHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            KT +IYDLL
Sbjct: 601 DKTKEIYDLL 609

BLAST of Carg27656 vs. TAIR10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 362.1 bits (928), Expect = 8.0e-100
Identity = 220/708 (31.07%), Postives = 383/708 (54.10%), Query Frame = 0

Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK 60
           +L+  K +HA  ++S     V I++KL+ LY    ++  A    +   + +   WN +I 
Sbjct: 66  NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125

Query: 61  SQVDSGLFLSAIMLYK-NMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGF 120
               +G     I  +   M   G+  D  TFP     V+     V+    +HC+ ++ GF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFP----SVLKACRTVIDGNKIHCLALKFGF 185

Query: 121 GSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEG 180
             D+Y   +++ +Y++ + +G+AR +FDEMP RD+ SW +MIS Y   G+   AL L  G
Sbjct: 186 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 245

Query: 181 MRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGE 240
           +R +   +SVT++++L AC    D   G  I    +K+GL  ++ + N  + +Y+  G  
Sbjct: 246 LRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 305

Query: 241 DEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISAT 300
            +  + F  +  ++++SW+ +I  Y      ++A+ +F+++    +    + LT++  A+
Sbjct: 306 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ--PDCLTLISLAS 365

Query: 301 KTSDSMCLILGENLHSLAIKTG--LYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSII 360
             S    +    ++    ++ G  L D  +  +++ MYAK G +D++  +FN +PN  +I
Sbjct: 366 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 425

Query: 361 TWGAMMSSFIQNGHFDEAVEIFSQMQAAG-LKPSLGILKHLIDAYAHLGALQLGRGIHCY 420
           +W  ++S + QNG   EA+E+++ M+  G +  + G    ++ A +  GAL+ G  +H  
Sbjct: 426 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 485

Query: 421 LIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGI 480
           L++  GL + +  + TSL +MY +CG +  A   F  I   + V W ++I  +G HG G 
Sbjct: 486 LLK-NGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 545

Query: 481 NALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCF 540
            A+ L+  M+ E V P+ +TF++LLSACSHSGLV EG   F  M++ + I P L+HY C 
Sbjct: 546 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 605

Query: 541 VDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNV 600
           VD+  R+ ++  A   I  M+   D  IWGAL+ ACRV+G+  +   A+  L E+EP++V
Sbjct: 606 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 665

Query: 601 GYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTD 660
           GY+ LLSN  AS G+W  V+++RS+ + K L K PGWS +E++  +  F +G+++H   +
Sbjct: 666 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 725

Query: 661 QIYDLLTLGDVRRTSEQAEPRMGLYT--RRCVSKDARPRRRVDYEMSH 703
           ++Y  L       T+ QA+ +M  Y    R V +D     +    MSH
Sbjct: 726 EMYREL-------TALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSH 755

BLAST of Carg27656 vs. TAIR10
Match: AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 360.5 bits (924), Expect = 2.3e-99
Identity = 216/686 (31.49%), Postives = 367/686 (53.50%), Query Frame = 0

Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHT-EPMLWNSII 60
           D+R   ++H+  +      T FI + L+ +Y K +DL +A  + + F    + +LWNSI+
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256

Query: 61  KSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGM-VHCVGIRMG 120
            S   SG  L  + L++ M   G   + +T  I++ +           G  +H   ++  
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYT--IVSALTACDGFSYAKLGKEIHASVLKSS 316

Query: 121 -FGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLF 180
              S+LY CN ++ +Y +C  +  A ++  +M N D+V+W S+I  YV       AL  F
Sbjct: 317 THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF 376

Query: 181 EGMRRV-LEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRL 240
             M     + + V+M +++ A     +L+ G  +   V+K+G   ++ + N  + MYS+ 
Sbjct: 377 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 436

Query: 241 GGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILI 300
                  R F  +  K+++SW  +I+ Y+     V+A+++F+ +    + +    L  ++
Sbjct: 437 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 496

Query: 301 SATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSI 360
            A+    SM ++  + +H   ++ GL D++++  L+D+Y K   +  +TR+F  I  + +
Sbjct: 497 RASSVLKSMLIV--KEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 556

Query: 361 ITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCY 420
           ++W +M+SS   NG+  EAVE+F +M   GL      L  ++ A A L AL  GR IHCY
Sbjct: 557 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCY 616

Query: 421 LIR--ICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQ 480
           L+R   C        +  ++++MY  CG + SA+  FD I  K ++ +TSMI  YG HG 
Sbjct: 617 LLRKGFC----LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGC 676

Query: 481 GINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYT 540
           G  A+ L+  M  E V+P+ ++FL+LL ACSH+GL+ EG      M   + ++P  EHY 
Sbjct: 677 GKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV 736

Query: 541 CFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPD 600
           C VD+L R+  V EAF  +  M       +W AL+ ACR + + +I   AA RLLELEP 
Sbjct: 737 CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 796

Query: 601 NVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSK 660
           N G   L+SN  A  G+W++VEK+R+ +    + K PG S+IE++G +H F + D+SH +
Sbjct: 797 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPE 856

Query: 661 TDQIYDLLTLGDVRRTSEQAEPRMGL 681
           + +IY+   L +V R  E+ + +  L
Sbjct: 857 SKEIYE--KLSEVTRKLEREKGKREL 872

BLAST of Carg27656 vs. TAIR10
Match: AT4G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 352.8 bits (904), Expect = 4.9e-97
Identity = 200/643 (31.10%), Postives = 343/643 (53.34%), Query Frame = 0

Query: 25  SKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGLFLSAIMLYKNMREVGVE 84
           ++ +R +     +  A+ + +     +  LWN +IK     GL++ A+  Y  M   GV+
Sbjct: 68  TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127

Query: 85  HDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCNTMMEVYAKCECLGHARK 144
            D FT+P +   V  I   +     +H + I++GF SD+Y CN+++ +Y K  C   A K
Sbjct: 128 ADTFTYPFVIKSVAGI-SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 187

Query: 145 VFDEMPNR-DLVSWTSMISAYVNVGDIVCALNLFEGMRRVLEPNSVTMMAMLQACCVTED 204
           VF+EMP R                            ++   +P+  + M+ L AC     
Sbjct: 188 VFEEMPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKCGFKPDRFSTMSALGACSHVYS 247

Query: 205 LVLGRLIQCLVVKNGL-LFDVGLQNWFLRMYSRLGGEDEFVRFFSEIDCKNVVSWDILIS 264
             +G+ I C  V++ +   DV +    L MYS+ G      R F+ +  +N+V+W+++I 
Sbjct: 248 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 307

Query: 265 FYSSVGDIVKAVDIFKQI--MAGEVPLIIETLTILISATKTSDSMCLILGENLHSLAIKT 324
            Y+  G +  A   F+++    G  P +I ++ +L        +  ++ G  +H  A++ 
Sbjct: 308 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL-------PASAILEGRTIHGYAMRR 367

Query: 325 G-LYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFIQNGHFDEAVEIF 384
           G L   +L T+L+DMY + G+L ++  +F+ +  +++I+W +++++++QNG    A+E+F
Sbjct: 368 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 427

Query: 385 SQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLEICNTHLETSLMNMYV 444
            ++  + L P    +  ++ AYA   +L  GR IH Y+++       NT +  SL++MY 
Sbjct: 428 QELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK--SRYWSNTIILNSLVHMYA 487

Query: 445 RCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMMSEEVAPNSVTFLS 504
            CG +  ARKCF+ I++KDVV+W S+I  Y  HG G  ++ L+  M++  V PN  TF S
Sbjct: 488 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 547

Query: 505 LLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTNL 564
           LL+ACS SG+V EG E F SM+  + I P +EHY C +DL+ R+     A   +  M  +
Sbjct: 548 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 607

Query: 565 CDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQASVGQWHEVEKLR 624
              RIWG+L+ A R + D  IA +AA ++ ++E DN G Y LL N  A  G+W +V +++
Sbjct: 608 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 667

Query: 625 SVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLL 663
            ++  K + +    S +E  G  H F +GDRSH  T++IY++L
Sbjct: 668 LLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700

BLAST of Carg27656 vs. TAIR10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 350.9 bits (899), Expect = 1.9e-96
Identity = 207/664 (31.17%), Postives = 354/664 (53.31%), Query Frame = 0

Query: 2   LRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKS 61
           L+ L+QI      +  +   F  +KL+ L+ ++  +  A  V         +L+++++K 
Sbjct: 50  LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109

Query: 62  QVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGS 121
                    A+  +  MR   VE   + F  L   V     ++     +H + ++ GF  
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLK-VCGDEAELRVGKEIHGLLVKSGFSL 169

Query: 122 DLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM- 181
           DL+    +  +YAKC  +  ARKVFD MP RDLVSW ++++ Y   G    AL + + M 
Sbjct: 170 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 229

Query: 182 RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED 241
              L+P+ +T++++L A      + +G+ I    +++G    V +    + MY++ G  +
Sbjct: 230 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 289

Query: 242 EFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIM-AGEVPLIIETLTILISAT 301
              + F  +  +NVVSW+ +I  Y    +  +A+ IF++++  G  P  +  +  L +  
Sbjct: 290 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 349

Query: 302 KTSDSMCLILGENLHSLAIKTGLYDSI-LRTSLLDMYAKFGELDNSTRLFNEIPNRSIIT 361
              D   L  G  +H L+++ GL  ++ +  SL+ MY K  E+D +  +F ++ +R++++
Sbjct: 350 DLGD---LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 409

Query: 362 WGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLI 421
           W AM+  F QNG   +A+  FSQM++  +KP       +I A A L      + IH  ++
Sbjct: 410 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 469

Query: 422 RICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINA 481
           R C  +  N  + T+L++MY +CG+I  AR  FD++  + V  W +MI+GYG HG G  A
Sbjct: 470 RSCLDK--NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 529

Query: 482 LNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVD 541
           L L+  M    + PN VTFLS++SACSHSGLV  G + FY M+  ++I+  ++HY   VD
Sbjct: 530 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 589

Query: 542 LLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGY 601
           LL R+ R+ EA+  I++M       ++GA++GAC+++ +   A  AA RL EL PD+ GY
Sbjct: 590 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 649

Query: 602 YTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQI 661
           + LL+N   +   W +V ++R  +  + L K PG S +E+   +H F SG  +H  + +I
Sbjct: 650 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 707

Query: 662 YDLL 663
           Y  L
Sbjct: 710 YAFL 707

BLAST of Carg27656 vs. TAIR10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 349.7 bits (896), Expect = 4.1e-96
Identity = 212/685 (30.95%), Postives = 364/685 (53.14%), Query Frame = 0

Query: 5   LKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVD 64
           L Q HA  IL    + + + +KL +       +  A  +  +    +  L+N +++    
Sbjct: 36  LAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSV 95

Query: 65  SGLFLSAIMLYKNMR---EVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGS 124
           +    S++ ++ ++R   ++      + F I      S + D     ++H   +  G  S
Sbjct: 96  NESPHSSLSVFAHLRKSTDLKPNSSTYAFAI---SAASGFRDDRAGRVIHGQAVVDGCDS 155

Query: 125 DLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM- 184
           +L   + ++++Y K   +  ARKVFD MP +D + W +MIS Y      V ++ +F  + 
Sbjct: 156 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 215

Query: 185 -RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGE 244
                  ++ T++ +L A    ++L LG  I  L  K G      +   F+ +YS+ G  
Sbjct: 216 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 275

Query: 245 DEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISAT 304
                 F E    ++V+++ +I  Y+S G+   ++ +FK++M     L   T   L+S  
Sbjct: 276 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST---LVSLV 335

Query: 305 KTSDSMCLILGENLHSLAIKTG-LYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIIT 364
             S  + LI    +H   +K+  L  + + T+L  +Y+K  E++++ +LF+E P +S+ +
Sbjct: 336 PVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 395

Query: 365 WGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLI 424
           W AM+S + QNG  ++A+ +F +MQ +   P+   +  ++ A A LGAL LG+ +H  L+
Sbjct: 396 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH-DLV 455

Query: 425 RICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINA 484
           R    E  + ++ T+L+ MY +CGSIA AR+ FDL+  K+ V W +MI GYG HGQG  A
Sbjct: 456 RSTDFE-SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 515

Query: 485 LNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVD 544
           LN+++ M++  + P  VTFL +L ACSH+GLV EG EIF SM  R+  +P ++HY C VD
Sbjct: 516 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 575

Query: 545 LLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGY 604
           +L R+  ++ A   I  M+      +W  L+GACR++ D  +A   + +L EL+PDNVGY
Sbjct: 576 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 635

Query: 605 YTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQI 664
           + LLSN  ++   + +   +R    ++ L K PG++ IE+    H F SGD+SH +  +I
Sbjct: 636 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEI 695

Query: 665 YDLLTL--GDVRRTSEQAEPRMGLY 682
           Y+ L    G +R    Q E  + L+
Sbjct: 696 YEKLEKLEGKMREAGYQPETELALH 710

BLAST of Carg27656 vs. Swiss-Prot
Match: sp|O81767|PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 362.1 bits (928), Expect = 1.4e-98
Identity = 220/708 (31.07%), Postives = 383/708 (54.10%), Query Frame = 0

Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK 60
           +L+  K +HA  ++S     V I++KL+ LY    ++  A    +   + +   WN +I 
Sbjct: 66  NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125

Query: 61  SQVDSGLFLSAIMLYK-NMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGF 120
               +G     I  +   M   G+  D  TFP     V+     V+    +HC+ ++ GF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFP----SVLKACRTVIDGNKIHCLALKFGF 185

Query: 121 GSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEG 180
             D+Y   +++ +Y++ + +G+AR +FDEMP RD+ SW +MIS Y   G+   AL L  G
Sbjct: 186 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 245

Query: 181 MRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGE 240
           +R +   +SVT++++L AC    D   G  I    +K+GL  ++ + N  + +Y+  G  
Sbjct: 246 LRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 305

Query: 241 DEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISAT 300
            +  + F  +  ++++SW+ +I  Y      ++A+ +F+++    +    + LT++  A+
Sbjct: 306 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ--PDCLTLISLAS 365

Query: 301 KTSDSMCLILGENLHSLAIKTG--LYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSII 360
             S    +    ++    ++ G  L D  +  +++ MYAK G +D++  +FN +PN  +I
Sbjct: 366 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 425

Query: 361 TWGAMMSSFIQNGHFDEAVEIFSQMQAAG-LKPSLGILKHLIDAYAHLGALQLGRGIHCY 420
           +W  ++S + QNG   EA+E+++ M+  G +  + G    ++ A +  GAL+ G  +H  
Sbjct: 426 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 485

Query: 421 LIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGI 480
           L++  GL + +  + TSL +MY +CG +  A   F  I   + V W ++I  +G HG G 
Sbjct: 486 LLK-NGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 545

Query: 481 NALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCF 540
            A+ L+  M+ E V P+ +TF++LLSACSHSGLV EG   F  M++ + I P L+HY C 
Sbjct: 546 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 605

Query: 541 VDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNV 600
           VD+  R+ ++  A   I  M+   D  IWGAL+ ACRV+G+  +   A+  L E+EP++V
Sbjct: 606 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 665

Query: 601 GYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTD 660
           GY+ LLSN  AS G+W  V+++RS+ + K L K PGWS +E++  +  F +G+++H   +
Sbjct: 666 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 725

Query: 661 QIYDLLTLGDVRRTSEQAEPRMGLYT--RRCVSKDARPRRRVDYEMSH 703
           ++Y  L       T+ QA+ +M  Y    R V +D     +    MSH
Sbjct: 726 EMYREL-------TALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSH 755

BLAST of Carg27656 vs. Swiss-Prot
Match: sp|Q9M1V3|PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 360.5 bits (924), Expect = 4.2e-98
Identity = 212/669 (31.69%), Postives = 360/669 (53.81%), Query Frame = 0

Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHT-EPMLWNSII 60
           D+R   ++H+  +      T FI + L+ +Y K +DL +A  + + F    + +LWNSI+
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256

Query: 61  KSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGM-VHCVGIRMG 120
            S   SG  L  + L++ M   G   + +T  I++ +           G  +H   ++  
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYT--IVSALTACDGFSYAKLGKEIHASVLKSS 316

Query: 121 -FGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLF 180
              S+LY CN ++ +Y +C  +  A ++  +M N D+V+W S+I  YV       AL  F
Sbjct: 317 THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF 376

Query: 181 EGMRRV-LEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRL 240
             M     + + V+M +++ A     +L+ G  +   V+K+G   ++ + N  + MYS+ 
Sbjct: 377 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 436

Query: 241 GGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILI 300
                  R F  +  K+++SW  +I+ Y+     V+A+++F+ +    + +    L  ++
Sbjct: 437 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 496

Query: 301 SATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSI 360
            A+    SM ++  + +H   ++ GL D++++  L+D+Y K   +  +TR+F  I  + +
Sbjct: 497 RASSVLKSMLIV--KEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 556

Query: 361 ITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCY 420
           ++W +M+SS   NG+  EAVE+F +M   GL      L  ++ A A L AL  GR IHCY
Sbjct: 557 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCY 616

Query: 421 LIR--ICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQ 480
           L+R   C        +  ++++MY  CG + SA+  FD I  K ++ +TSMI  YG HG 
Sbjct: 617 LLRKGFC----LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGC 676

Query: 481 GINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYT 540
           G  A+ L+  M  E V+P+ ++FL+LL ACSH+GL+ EG      M   + ++P  EHY 
Sbjct: 677 GKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV 736

Query: 541 CFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPD 600
           C VD+L R+  V EAF  +  M       +W AL+ ACR + + +I   AA RLLELEP 
Sbjct: 737 CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 796

Query: 601 NVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSK 660
           N G   L+SN  A  G+W++VEK+R+ +    + K PG S+IE++G +H F + D+SH +
Sbjct: 797 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPE 856

Query: 661 TDQIYDLLT 664
           + +IY+ L+
Sbjct: 857 SKEIYEKLS 857

BLAST of Carg27656 vs. Swiss-Prot
Match: sp|O49619|PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H27 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.8e-96
Identity = 200/643 (31.10%), Postives = 343/643 (53.34%), Query Frame = 0

Query: 25  SKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGLFLSAIMLYKNMREVGVE 84
           ++ +R +     +  A+ + +     +  LWN +IK     GL++ A+  Y  M   GV+
Sbjct: 68  TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127

Query: 85  HDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCNTMMEVYAKCECLGHARK 144
            D FT+P +   V  I   +     +H + I++GF SD+Y CN+++ +Y K  C   A K
Sbjct: 128 ADTFTYPFVIKSVAGI-SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 187

Query: 145 VFDEMPNR-DLVSWTSMISAYVNVGDIVCALNLFEGMRRVLEPNSVTMMAMLQACCVTED 204
           VF+EMP R                            ++   +P+  + M+ L AC     
Sbjct: 188 VFEEMPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKCGFKPDRFSTMSALGACSHVYS 247

Query: 205 LVLGRLIQCLVVKNGL-LFDVGLQNWFLRMYSRLGGEDEFVRFFSEIDCKNVVSWDILIS 264
             +G+ I C  V++ +   DV +    L MYS+ G      R F+ +  +N+V+W+++I 
Sbjct: 248 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 307

Query: 265 FYSSVGDIVKAVDIFKQI--MAGEVPLIIETLTILISATKTSDSMCLILGENLHSLAIKT 324
            Y+  G +  A   F+++    G  P +I ++ +L        +  ++ G  +H  A++ 
Sbjct: 308 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL-------PASAILEGRTIHGYAMRR 367

Query: 325 G-LYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFIQNGHFDEAVEIF 384
           G L   +L T+L+DMY + G+L ++  +F+ +  +++I+W +++++++QNG    A+E+F
Sbjct: 368 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 427

Query: 385 SQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLEICNTHLETSLMNMYV 444
            ++  + L P    +  ++ AYA   +L  GR IH Y+++       NT +  SL++MY 
Sbjct: 428 QELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK--SRYWSNTIILNSLVHMYA 487

Query: 445 RCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMMSEEVAPNSVTFLS 504
            CG +  ARKCF+ I++KDVV+W S+I  Y  HG G  ++ L+  M++  V PN  TF S
Sbjct: 488 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 547

Query: 505 LLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTNL 564
           LL+ACS SG+V EG E F SM+  + I P +EHY C +DL+ R+     A   +  M  +
Sbjct: 548 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 607

Query: 565 CDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQASVGQWHEVEKLR 624
              RIWG+L+ A R + D  IA +AA ++ ++E DN G Y LL N  A  G+W +V +++
Sbjct: 608 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 667

Query: 625 SVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLL 663
            ++  K + +    S +E  G  H F +GDRSH  T++IY++L
Sbjct: 668 LLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700

BLAST of Carg27656 vs. Swiss-Prot
Match: sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.3e-95
Identity = 207/664 (31.17%), Postives = 354/664 (53.31%), Query Frame = 0

Query: 2   LRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKS 61
           L+ L+QI      +  +   F  +KL+ L+ ++  +  A  V         +L+++++K 
Sbjct: 50  LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109

Query: 62  QVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGS 121
                    A+  +  MR   VE   + F  L   V     ++     +H + ++ GF  
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLK-VCGDEAELRVGKEIHGLLVKSGFSL 169

Query: 122 DLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM- 181
           DL+    +  +YAKC  +  ARKVFD MP RDLVSW ++++ Y   G    AL + + M 
Sbjct: 170 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 229

Query: 182 RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED 241
              L+P+ +T++++L A      + +G+ I    +++G    V +    + MY++ G  +
Sbjct: 230 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 289

Query: 242 EFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIM-AGEVPLIIETLTILISAT 301
              + F  +  +NVVSW+ +I  Y    +  +A+ IF++++  G  P  +  +  L +  
Sbjct: 290 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 349

Query: 302 KTSDSMCLILGENLHSLAIKTGLYDSI-LRTSLLDMYAKFGELDNSTRLFNEIPNRSIIT 361
              D   L  G  +H L+++ GL  ++ +  SL+ MY K  E+D +  +F ++ +R++++
Sbjct: 350 DLGD---LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 409

Query: 362 WGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLI 421
           W AM+  F QNG   +A+  FSQM++  +KP       +I A A L      + IH  ++
Sbjct: 410 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 469

Query: 422 RICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINA 481
           R C  +  N  + T+L++MY +CG+I  AR  FD++  + V  W +MI+GYG HG G  A
Sbjct: 470 RSCLDK--NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 529

Query: 482 LNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVD 541
           L L+  M    + PN VTFLS++SACSHSGLV  G + FY M+  ++I+  ++HY   VD
Sbjct: 530 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 589

Query: 542 LLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGY 601
           LL R+ R+ EA+  I++M       ++GA++GAC+++ +   A  AA RL EL PD+ GY
Sbjct: 590 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 649

Query: 602 YTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQI 661
           + LL+N   +   W +V ++R  +  + L K PG S +E+   +H F SG  +H  + +I
Sbjct: 650 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 707

Query: 662 YDLL 663
           Y  L
Sbjct: 710 YAFL 707

BLAST of Carg27656 vs. Swiss-Prot
Match: sp|Q9SUH6|PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.4e-95
Identity = 212/685 (30.95%), Postives = 364/685 (53.14%), Query Frame = 0

Query: 5   LKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVD 64
           L Q HA  IL    + + + +KL +       +  A  +  +    +  L+N +++    
Sbjct: 36  LAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSV 95

Query: 65  SGLFLSAIMLYKNMR---EVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGS 124
           +    S++ ++ ++R   ++      + F I      S + D     ++H   +  G  S
Sbjct: 96  NESPHSSLSVFAHLRKSTDLKPNSSTYAFAI---SAASGFRDDRAGRVIHGQAVVDGCDS 155

Query: 125 DLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM- 184
           +L   + ++++Y K   +  ARKVFD MP +D + W +MIS Y      V ++ +F  + 
Sbjct: 156 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 215

Query: 185 -RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGE 244
                  ++ T++ +L A    ++L LG  I  L  K G      +   F+ +YS+ G  
Sbjct: 216 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 275

Query: 245 DEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISAT 304
                 F E    ++V+++ +I  Y+S G+   ++ +FK++M     L   T   L+S  
Sbjct: 276 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST---LVSLV 335

Query: 305 KTSDSMCLILGENLHSLAIKTG-LYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIIT 364
             S  + LI    +H   +K+  L  + + T+L  +Y+K  E++++ +LF+E P +S+ +
Sbjct: 336 PVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 395

Query: 365 WGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLI 424
           W AM+S + QNG  ++A+ +F +MQ +   P+   +  ++ A A LGAL LG+ +H  L+
Sbjct: 396 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH-DLV 455

Query: 425 RICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINA 484
           R    E  + ++ T+L+ MY +CGSIA AR+ FDL+  K+ V W +MI GYG HGQG  A
Sbjct: 456 RSTDFE-SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 515

Query: 485 LNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVD 544
           LN+++ M++  + P  VTFL +L ACSH+GLV EG EIF SM  R+  +P ++HY C VD
Sbjct: 516 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 575

Query: 545 LLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGY 604
           +L R+  ++ A   I  M+      +W  L+GACR++ D  +A   + +L EL+PDNVGY
Sbjct: 576 ILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGY 635

Query: 605 YTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQI 664
           + LLSN  ++   + +   +R    ++ L K PG++ IE+    H F SGD+SH +  +I
Sbjct: 636 HVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEI 695

Query: 665 YDLLTL--GDVRRTSEQAEPRMGLY 682
           Y+ L    G +R    Q E  + L+
Sbjct: 696 YEKLEKLEGKMREAGYQPETELALH 710

BLAST of Carg27656 vs. TrEMBL
Match: tr|A0A1S3C6I7|A0A1S3C6I7_CUCME (pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497256 PE=4 SV=1)

HSP 1 Score: 1052.4 bits (2720), Expect = 4.7e-304
Identity = 516/610 (84.59%), Postives = 556/610 (91.15%), Query Frame = 0

Query: 53  MLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 112
           MLWN++IKS  DSGLF SA++LYKNMREV VEHDGFT PI+N V++SIWVDVVY GMVHC
Sbjct: 1   MLWNNVIKSHFDSGLFHSALLLYKNMREVRVEHDGFTLPIVNQVILSIWVDVVYGGMVHC 60

Query: 113 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 172
           VGIRMGF SDLYFCNTMMEVY KC CL  AR VFDEMPNRDLVSWTSMISAYV  GD+ C
Sbjct: 61  VGIRMGFSSDLYFCNTMMEVYGKCGCLVSARDVFDEMPNRDLVSWTSMISAYVKGGDVFC 120

Query: 173 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 232
           AL++FEGMRR LEPNSVT++ MLQACC T++LVLGRL+QC VVKNGLLFD GLQN FLRM
Sbjct: 121 ALDIFEGMRRELEPNSVTVIVMLQACCATQNLVLGRLLQCYVVKNGLLFDTGLQNSFLRM 180

Query: 233 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 292
           YSRLGGEDE V FFSEID KNVVSW+IL+SFYSS+GDIVK VDI  +IM GEVPL IETL
Sbjct: 181 YSRLGGEDEVVAFFSEIDFKNVVSWNILMSFYSSMGDIVKVVDILNKIM-GEVPLSIETL 240

Query: 293 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 352
           TILIS   TSDS CLILGENLHSLAIK+GLYD IL TSLLDMYAKFGEL+NSTRLF EIP
Sbjct: 241 TILISGIATSDSGCLILGENLHSLAIKSGLYDDILCTSLLDMYAKFGELENSTRLFKEIP 300

Query: 353 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 412
           NRSIITWGAMMSSFIQNGHFD+AV+IF QMQ AGLKPS+GILKHLIDAYA+LGALQLG+ 
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDDAVDIFKQMQVAGLKPSVGILKHLIDAYAYLGALQLGKA 360

Query: 413 IHCYLIRICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 472
           IHC+LIRI GL +CNT LETS++NMYVRCGSIASARKCFDLI++KDVVAWTSMIEGYGAH
Sbjct: 361 IHCHLIRIYGLVVCNTRLETSVLNMYVRCGSIASARKCFDLILIKDVVAWTSMIEGYGAH 420

Query: 473 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 532
           G GI+ALNL+H M SEEV PN+VTFLSLLSACSHSGLVSEGC IFYSMRSRFNIKPDLEH
Sbjct: 421 GLGIDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCGIFYSMRSRFNIKPDLEH 480

Query: 533 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 592
           YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIA YAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIANYAAHRLLELE 540

Query: 593 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSH 652
           PDNVGYYTLLSN+QASVGQWHE EKLRS+VYEK+L KKPGWSFIELNG IHGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKNLAKKPGWSFIELNGTIHGFVSGDRSH 600

Query: 653 SKTDQIYDLL 663
            K ++IYDLL
Sbjct: 601 YKANEIYDLL 609

BLAST of Carg27656 vs. TrEMBL
Match: tr|A0A2P6RTB7|A0A2P6RTB7_ROSCH (Putative pentatricopeptide OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0124611 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.2e-201
Identity = 361/657 (54.95%), Postives = 469/657 (71.39%), Query Frame = 0

Query: 8   IHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGL 67
           +HA  ++S+GF  + + SKL+ LY +FNDL SAVSV ++      MLWN II++ ++SG 
Sbjct: 1   MHARILVSTGFKPLNLFSKLVSLYARFNDLGSAVSVFSSLQEPNTMLWNLIIRTHIESGR 60

Query: 68  FLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCN 127
             SA++LY+ MRE+GV HD FTFPI+N  V+ +  DV YAGMVH V I+MGFG D+YF N
Sbjct: 61  LDSALLLYRKMRELGVSHDCFTFPIVNKAVLLVGGDVRYAGMVHSVAIQMGFGLDVYFGN 120

Query: 128 TMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGMRRVLEPN 187
           TM+EVY KC  L +ARK+FDEMP+ DLVSWTSMIS YV+ G++    +LF  MR  LEPN
Sbjct: 121 TMIEVYVKCGNLSYARKLFDEMPDTDLVSWTSMISGYVSEGNVASGFSLFSEMRMELEPN 180

Query: 188 SVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGEDEFVRFFS 247
           SVTM+ MLQACC  +  + GR +   V+KNGLL +  +QN  LRMY++LG  +E   FF 
Sbjct: 181 SVTMLVMLQACCGFQTSIYGRQVHGYVIKNGLLSNGAIQNSILRMYAKLGTIEEVEDFFR 240

Query: 248 EIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATKTSDSMCL 307
           E+D ++VVSW+I IS Y+S GD VK  D+F ++  G  P  IETLTI++SA   +    L
Sbjct: 241 ELDRRDVVSWNICISSYTSRGDFVKVRDLFNEMQGGVAP-SIETLTIVLSA--LTKHGIL 300

Query: 308 ILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFI 367
             GE+LH LA+K+GL+D +L+TSLLD YAK G+L++S +LF E+P+R+ IT GAMM   I
Sbjct: 301 SQGESLHGLAVKSGLHDDVLQTSLLDFYAKCGKLESSDKLFRELPDRNCITCGAMMLGLI 360

Query: 368 QNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIR--ICGLEI 427
            NG+F EAV +F QMQAA                   GAL+LG+ +H Y+IR   CG E 
Sbjct: 361 HNGYFTEAVGVFRQMQAA-------------------GALKLGKAVHGYIIRKSFCGTEE 420

Query: 428 CNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHM 487
             THLETS++NMY+RCGSI+++R CF+ ++ KDVVAWTSMIEGYG+HG G  A  L+  M
Sbjct: 421 GLTHLETSILNMYIRCGSISTSRVCFNRMVFKDVVAWTSMIEGYGSHGLGFEAAKLFDLM 480

Query: 488 MSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTR 547
             E + PNSVTFLSLLSA SHSGLV+EGCE FY M+ RF I+PD++HYTC VDLL RS +
Sbjct: 481 TREGIKPNSVTFLSLLSAYSHSGLVTEGCEAFYYMKWRFGIEPDIDHYTCVVDLLGRSGK 540

Query: 548 VREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNT 607
           ++EA  +IL+M    D RIWGAL+   ++Y +  +  YAA RLLELEP NVGY+TLLSNT
Sbjct: 541 LKEALVVILKMLAFPDSRIWGALLSGSKIYSNRALGQYAAQRLLELEPGNVGYFTLLSNT 600

Query: 608 QASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLL 663
           +ASVG W EVE++R V+ E DL KKPGWS IE NG+IHGFVSG  SH   ++IY++L
Sbjct: 601 EASVGHWDEVEEIRKVMKENDLKKKPGWSCIEANGVIHGFVSGGNSHHHIEEIYEVL 635

BLAST of Carg27656 vs. TrEMBL
Match: tr|A0A2R6QVC9|A0A2R6QVC9_ACTCH (Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc13198 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 5.7e-201
Identity = 362/662 (54.68%), Postives = 470/662 (71.00%), Query Frame = 0

Query: 1   DLRLLKQIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIK 60
           DL+ LK+ HA FI+S+GF+ V +ASKLI LY +F DL  AVSV          +WN+IIK
Sbjct: 53  DLQTLKKAHASFIISNGFEPVSVASKLIYLYSQFCDLEGAVSVFETVQEPNTFIWNAIIK 112

Query: 61  SQVDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFG 120
           + VD G+  SA  LY+ MR + +EHDGFTFP+LN  V+ +   V+Y G VHC+ I+MGF 
Sbjct: 113 AHVDLGIGDSAFSLYRQMRNLNIEHDGFTFPVLNRAVLLLQNSVLYGGFVHCLAIKMGFE 172

Query: 121 SDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGM 180
           SDLYFCNTM++VY K  C+G+A +VF EM  RDLVSWTSMIS YV  G+I+ A   FE M
Sbjct: 173 SDLYFCNTMIDVYVKSGCIGYACQVFVEMSQRDLVSWTSMISGYVYEGNIIGAFRFFEEM 232

Query: 181 RRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGED 240
           R  LEP  VT++ MLQ CC    ++ GR +   V+K G L +  LQN  L+MY+  G  D
Sbjct: 233 RLELEPGPVTVVIMLQVCCSHGSVIEGRQLHGFVIKRGFLIEGSLQNSILKMYANTGRID 292

Query: 241 EFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATK 300
           +   FFSEI  ++VVSW+ILIS Y S+ D+++    F + M GEV   IETLT++ISA  
Sbjct: 293 DAEDFFSEI-YRDVVSWNILISSYISIEDVMEVAKCFNK-MQGEVRPSIETLTLVISA-- 352

Query: 301 TSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWG 360
           +++S  L+ GENLH  AIK+ LYD+IL+TSLL  YAK GEL  S ++F+EIP ++ ITW 
Sbjct: 353 SANSRNLLQGENLHCFAIKSRLYDTILQTSLLHFYAKCGELKRSAQMFSEIPFKNSITWS 412

Query: 361 AMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIR- 420
           AMMS   + G+F++A+E+F Q++ + LKP   +   L+  Y HLGAL+LG+GIH YLI+ 
Sbjct: 413 AMMSGLTEGGYFEQAIELFRQIRDSDLKPVAEMFNSLVVVYTHLGALKLGKGIHAYLIKN 472

Query: 421 -ICGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINA 480
             C  E  N  LET+++NMYVRCGSI+ A+ CFD  IV+D+VAWTSMIEG GAHG G+ A
Sbjct: 473 SFCNSEGDNAQLETAILNMYVRCGSISYAKTCFDRTIVRDLVAWTSMIEGCGAHGLGLEA 532

Query: 481 LNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVD 540
           L L+H M++E V PN VTFLSLLSACSHSGL+ EGC +F+SM+ RF  +PDL  YTC VD
Sbjct: 533 LQLFHQMVAEGVEPNGVTFLSLLSACSHSGLLMEGCGVFFSMKWRFGNEPDLNDYTCIVD 592

Query: 541 LLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGY 600
           LL RS +++EA AIIL++    DGRIWGAL+ A RV+G+ K A YAA RLLELE DN GY
Sbjct: 593 LLGRSGKLKEALAIILKLVAFPDGRIWGALLAASRVHGNQKFAEYAAQRLLELEHDNAGY 652

Query: 601 YTLLSNTQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQI 660
           YTL+SN QA V +W +VE++R  + + +L KKPGWS IE  G IHGFVSGDRSH +  +I
Sbjct: 653 YTLISNVQALVERWDDVEEVRRRMKDDNLTKKPGWSCIEAKGSIHGFVSGDRSHPRMVEI 710

BLAST of Carg27656 vs. TrEMBL
Match: tr|A0A2N9FID5|A0A2N9FID5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14662 PE=4 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 2.2e-200
Identity = 359/637 (56.36%), Postives = 455/637 (71.43%), Query Frame = 0

Query: 30  LYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFT 89
           LY +F+D+ S + V N       + WN IIKS +D GLF SA++LYK MR +GV HD FT
Sbjct: 3   LYAQFHDIDSVIRVFNTLEKPHTIAWNLIIKSHLDLGLFDSALLLYKTMRHLGVAHDSFT 62

Query: 90  FPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEM 149
           FPI+N  V+S+  DV+Y  MVHCV  +MGFG ++YFCNTM+EVY KC C+ +ARK+FDEM
Sbjct: 63  FPIVNQAVLSLQSDVIYGEMVHCVSTKMGFGFEVYFCNTMIEVYVKCGCVVYARKLFDEM 122

Query: 150 PNRDLVSWTSMISAYVNVGDIVCALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRL 209
             RDLVSWTSMIS YV  G +  A  LF  M    EPNSVT++ MLQACC  E L+ G  
Sbjct: 123 SQRDLVSWTSMISGYVCEGSVGSAFYLFREMMVKSEPNSVTLIIMLQACCAGESLIHGMQ 182

Query: 210 IQCLVVKNGLLFDVGLQNWFLRMYSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGD 269
           +    +K+GL  D  LQN  L+MY+R G  +E   FFS+ID K+ VSW+ILISFYS  GD
Sbjct: 183 LHGYAIKSGLESDGSLQNSVLKMYTRTGSVEEVEIFFSKIDRKDDVSWNILISFYSMKGD 242

Query: 270 IVKAVDIFKQIMAGEVPLIIETLTILISATKTSDSMCLILGENLHSLAIKTGLYDSILRT 329
           I K V+ F + M G   L IETLT+LISA   + S  L  GE +H LAIK+G  D +L T
Sbjct: 243 IEKLVNRFSE-MQGIAALSIETLTLLISA--FAKSRDLFQGEQIHCLAIKSGFCDDVLLT 302

Query: 330 SLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKP 389
           SLLD YAK G+++ S +LF +I  R+ +T+GAMMS F+QNG+  +A+ +F QMQAA ++P
Sbjct: 303 SLLDFYAKCGKIEISDQLFRKISYRNNVTFGAMMSGFVQNGYVKDAINLFHQMQAANVEP 362

Query: 390 SLGILKHLIDAYAHLGALQLGRGIHCYLIR--ICGLEICNTHLETSLMNMYVRCGSIASA 449
              IL+ ++DAY  LGALQLG+ IH Y IR   C      T+LE S++NMY+RCG+I+SA
Sbjct: 363 GAEILRSILDAYTQLGALQLGKAIHGYFIRHIFCRTMEETTYLEASILNMYIRCGNISSA 422

Query: 450 RKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHS 509
           R  F  I+VKD+V WT+MIEG+G HG G  AL L+  M+ E + PNSVTFLSLLSACSHS
Sbjct: 423 RVSFHNILVKDLVIWTTMIEGFGTHGLGSEALELFGLMLKERIKPNSVTFLSLLSACSHS 482

Query: 510 GLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGA 569
           GLV EGCE++ SM+  F I+P+L+HYTC VDLL R  +++EA AII++M    DGRIWGA
Sbjct: 483 GLVREGCEVYNSMKWIFGIQPNLDHYTCMVDLLGRYGKLKEALAIIVKMVIFSDGRIWGA 542

Query: 570 LMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDL 629
           L+ ACRV+GD K+  Y A RLLELEPDNVGY+TLLSN QA VG+W EVE++R V+ EKDL
Sbjct: 543 LLAACRVHGDIKLGEYTAQRLLELEPDNVGYHTLLSNVQAGVGRWDEVEEVRRVMNEKDL 602

Query: 630 VKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLLTL 665
            KKPGWS  E  G+IHGFVS DRSH + ++IYD+L L
Sbjct: 603 KKKPGWSCFEAKGMIHGFVSADRSHHQVEEIYDILGL 636

BLAST of Carg27656 vs. TrEMBL
Match: tr|A0A2N9H6Z6|A0A2N9H6Z6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35445 PE=4 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 3.7e-200
Identity = 358/635 (56.38%), Postives = 454/635 (71.50%), Query Frame = 0

Query: 30  LYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSGLFLSAIMLYKNMREVGVEHDGFT 89
           LY +F+D+ S + V N       + WN IIKS +D GLF SA++LYK MR +GV HD FT
Sbjct: 3   LYAQFHDIDSVIRVFNTLEKPHTIAWNLIIKSHLDLGLFDSALLLYKTMRHLGVAHDSFT 62

Query: 90  FPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEM 149
           FPI+N  V+S+  DV+Y  MVHCV  +MGFG ++YFCNTM+EVY KC C+ +ARK+FDEM
Sbjct: 63  FPIVNQAVLSLQSDVIYGEMVHCVSTKMGFGFEVYFCNTMIEVYVKCGCVVYARKLFDEM 122

Query: 150 PNRDLVSWTSMISAYVNVGDIVCALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRL 209
             RDLVSWTSMIS YV  G +  A  LF  M    EPNSVT++ MLQACC  E L+ G  
Sbjct: 123 SQRDLVSWTSMISGYVCEGSVGSAFYLFREMMVKSEPNSVTLIIMLQACCAGESLIHGMQ 182

Query: 210 IQCLVVKNGLLFDVGLQNWFLRMYSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGD 269
           +    +K+GL  D  LQN  L+MY+R G  +E   FFS+ID K+ VSW+ILISFYS  GD
Sbjct: 183 LHGYAIKSGLESDGSLQNSVLKMYTRTGSVEEVEIFFSKIDRKDDVSWNILISFYSMKGD 242

Query: 270 IVKAVDIFKQIMAGEVPLIIETLTILISATKTSDSMCLILGENLHSLAIKTGLYDSILRT 329
           I K V+ F + M G   L IETLT+LISA   + S  L  GE +H LAIK+G  D +L T
Sbjct: 243 IEKLVNRFSE-MQGIAALSIETLTLLISA--FAKSRDLFQGEQIHCLAIKSGFCDDVLLT 302

Query: 330 SLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKP 389
           SLLD YAK G+++ S +LF +I  R+ +T+GAMMS F+QNG+  +A+ +F QMQAA ++P
Sbjct: 303 SLLDFYAKCGKIEISDQLFRKISYRNNVTFGAMMSGFVQNGYVKDAINLFHQMQAANVEP 362

Query: 390 SLGILKHLIDAYAHLGALQLGRGIHCYLIR--ICGLEICNTHLETSLMNMYVRCGSIASA 449
              IL+ ++DAY  LGALQLG+ IH Y IR   C      T+LE S++NMY+RCG+I+SA
Sbjct: 363 GAEILRSILDAYTQLGALQLGKAIHGYFIRHIFCRTMEETTYLEASILNMYIRCGNISSA 422

Query: 450 RKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHS 509
           R  F  I+VKD+V WT+MIEG+G HG G  AL L+  M+ E + PNSVTFLSLLSACSHS
Sbjct: 423 RVSFHNILVKDLVIWTTMIEGFGTHGLGSEALELFGLMLKERIKPNSVTFLSLLSACSHS 482

Query: 510 GLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGA 569
           GLV EGCE++ SM+  F I+P+L+HYTC VDLL R  +++EA AII++M    DGRIWGA
Sbjct: 483 GLVREGCEVYNSMKWIFGIQPNLDHYTCMVDLLGRYGKLKEALAIIVKMVIFSDGRIWGA 542

Query: 570 LMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDL 629
           L+ ACRV+GD K+  Y A RLLELEPDNVGY+TLLSN QA VG+W EVE++R V+ EKDL
Sbjct: 543 LLAACRVHGDIKLGEYTAQRLLELEPDNVGYHTLLSNVQAGVGRWDEVEEVRRVMNEKDL 602

Query: 630 VKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLL 663
            KKPGWS  E  G+IHGFVS DRSH + ++IYD+L
Sbjct: 603 KKKPGWSCFEAKGMIHGFVSADRSHHQVEEIYDIL 634

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023526509.10.0e+0098.34pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucur... [more]
XP_022932989.10.0e+0098.52pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucur... [more]
XP_022967941.10.0e+0097.21pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucur... [more]
XP_008457591.17.1e-30484.59PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic ... [more]
XP_022153922.11.3e-28680.49pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Momor... [more]
Match NameE-valueIdentityDescription
AT4G33990.18.0e-10031.07Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G63370.12.3e-9931.49Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G35130.14.9e-9731.10Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G11290.11.9e-9631.17Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G30700.14.1e-9630.95Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
sp|O81767|PP348_ARATH1.4e-9831.07Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... [more]
sp|Q9M1V3|PP296_ARATH4.2e-9831.69Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... [more]
sp|O49619|PP350_ARATH8.8e-9631.10Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidop... [more]
sp|Q3E6Q1|PPR32_ARATH3.3e-9531.17Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
sp|Q9SUH6|PP341_ARATH7.4e-9530.95Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3C6I7|A0A1S3C6I7_CUCME4.7e-30484.59pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Cucumis ... [more]
tr|A0A2P6RTB7|A0A2P6RTB7_ROSCH1.2e-20154.95Putative pentatricopeptide OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0124611 P... [more]
tr|A0A2R6QVC9|A0A2R6QVC9_ACTCH5.7e-20154.68Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensi... [more]
tr|A0A2N9FID5|A0A2N9FID5_FAGSY2.2e-20056.36Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14662 PE=4 SV=1[more]
tr|A0A2N9H6Z6|A0A2N9H6Z6_FAGSY3.7e-20056.38Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35445 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27656-RACarg27656-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 426..639
e-value: 4.7E-33
score: 116.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 310..423
e-value: 1.3E-16
score: 63.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 208..306
e-value: 3.6E-8
score: 34.9
coord: 110..206
e-value: 1.6E-19
score: 72.0
coord: 11..100
e-value: 3.8E-5
score: 25.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 317..385
coord: 565..617
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 457..505
e-value: 1.4E-9
score: 37.9
coord: 355..390
e-value: 3.3E-7
score: 30.3
coord: 153..199
e-value: 7.1E-8
score: 32.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 255..280
e-value: 0.039
score: 14.1
coord: 329..354
e-value: 0.44
score: 10.8
coord: 55..83
e-value: 0.11
score: 12.7
coord: 126..152
e-value: 0.0011
score: 18.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 495..529
e-value: 1.2E-4
score: 20.0
coord: 126..154
e-value: 1.7E-4
score: 19.6
coord: 255..282
e-value: 0.0026
score: 15.8
coord: 155..182
e-value: 2.8E-4
score: 18.9
coord: 357..390
e-value: 1.4E-8
score: 32.3
coord: 460..493
e-value: 1.1E-4
score: 20.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 427..457
score: 5.996
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 529..559
score: 6.467
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 253..287
score: 8.627
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 157..183
score: 5.437
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 187..221
score: 5.174
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 493..523
score: 8.638
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 324..354
score: 7.235
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 122..156
score: 9.262
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 355..389
score: 12.726
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 595..629
score: 5.174
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 458..492
score: 10.413
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 51..85
score: 8.144
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..90
coord: 113..637
NoneNo IPR availablePANTHERPTHR24015:SF1617SUBFAMILY NOT NAMEDcoord: 1..90
coord: 113..637

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg27656CmoCh03G001870Cucurbita moschata (Rifu)carcmoB0310
Carg27656Cp4.1LG01g17300Cucurbita pepo (Zucchini)carcpeB0314
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None