BLAST of CmoCh03G001870 vs. Swiss-Prot
Match:
PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3 SV=1)
HSP 1 Score: 392.1 bits (1006), Expect = 1.1e-107
Identity = 216/617 (35.01%), Postives = 354/617 (57.37%), Query Frame = 1
Query: 2 LWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCV 61
LWN +IK GL++ A+ Y M GV+ D FT+P + V I + +H +
Sbjct: 97 LWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGI-SSLEEGKKIHAM 156
Query: 62 GIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCA 121
I++GF SD+Y CN+++ +Y K C A KVF+EMP RD+VSW SMIS Y+ +GD +
Sbjct: 157 VIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSS 216
Query: 122 LNLFEGMRRV-FEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGL-LFDVGLQNWFLR 181
L LF+ M + F+P+ + M+ L AC +G+ I C V++ + DV + L
Sbjct: 217 LMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILD 276
Query: 182 MYSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMA--GEVPLII 241
MYS+ G R F+ + +N+V+W+++I Y+ G + A F+++ G P +I
Sbjct: 277 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 336
Query: 242 ETLTILISATKTSDSMCLILGENLHSLAIKTG-LYDSILRTSLLDMYAKFGELDNSTRLF 301
++ +L ++ ++ G +H A++ G L +L T+L+DMY + G+L ++ +F
Sbjct: 337 TSINLLPASA-------ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIF 396
Query: 302 NEIPNRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQ 361
+ + +++I+W +++++++QNG A+E+F ++ + L P + ++ AYA +L
Sbjct: 397 DRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLS 456
Query: 362 LGRGIHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEG 421
GR IH Y+++ NT + SL++MY CG + ARKCF+ I++KDVV+W S+I
Sbjct: 457 EGREIHAYIVK--SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 516
Query: 422 YGSHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKP 481
Y HG G ++ L+ M++ V PN TF SLL+ACS SG+V EG E F SM+ + I P
Sbjct: 517 YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDP 576
Query: 482 DLEHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRL 541
+EHY C +DL+ R+ A + M + RIWG+L+ A R + D IA +AA ++
Sbjct: 577 GIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQI 636
Query: 542 LELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSG 601
++E DN G Y LL N A G+W +V +++ ++ K + S VE G H F +G
Sbjct: 637 FKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNG 696
Query: 602 DRSHCKTDQIYDLLIIV 614
DRSH T++IY++L +V
Sbjct: 697 DRSHVATNKIYEVLDVV 703
BLAST of CmoCh03G001870 vs. Swiss-Prot
Match:
PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 355.9 bits (912), Expect = 8.9e-97
Identity = 202/617 (32.74%), Postives = 345/617 (55.92%), Query Frame = 1
Query: 3 WNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVG 62
WNS+I G + A+ +Y ++ + D FT + ++ V G+ H
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL-HGFA 234
Query: 63 IRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCAL 122
++ G S + N ++ +Y K AR+VFDEM RD VS+ +MI Y+ + + ++
Sbjct: 235 LKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESV 294
Query: 123 NLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYS 182
+F F+P+ +T+ ++L+AC DL L + I ++K G + + ++N + +Y+
Sbjct: 295 RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYA 354
Query: 183 RLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTI 242
+ G F+ ++CK+ VSW+ +IS Y GD+++A+ +FK +M E T +
Sbjct: 355 KCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLM 414
Query: 243 LIS-ATKTSDSMCLILGENLHSLAIKTGL-YDSILRTSLLDMYAKFGELDNSTRLFNEIP 302
LIS +T+ +D L G+ LHS IK+G+ D + +L+DMYAK GE+ +S ++F+ +
Sbjct: 415 LISVSTRLAD---LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 474
Query: 303 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 362
+TW ++S+ ++ G F +++ +QM+ + + P + + A L A +LG+
Sbjct: 475 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 534
Query: 363 IHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGSH 422
IHC L+R +G E + +L+ MY +CG + ++ + F+ + +DVV WT MI YG +
Sbjct: 535 IHCCLLR-FGYE-SELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMY 594
Query: 423 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 482
G+G AL + M + P+SV F++++ ACSHSGLV EG F M++ + I P +EH
Sbjct: 595 GEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEH 654
Query: 483 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 542
Y C VDLLSRS ++ +A I M D IW +++ ACR GD + A + R++EL
Sbjct: 655 YACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN 714
Query: 543 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDRSH 602
PD+ GY L SN A++ +W +V +R + +K K PG+S++E+ +H F SGD S
Sbjct: 715 PDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSA 774
Query: 603 CKTDQIYDLLIIVYGLL 618
+++ IY L I+Y L+
Sbjct: 775 PQSEAIYKSLEILYSLM 785
BLAST of CmoCh03G001870 vs. Swiss-Prot
Match:
PP205_ARATH (Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2)
HSP 1 Score: 350.9 bits (899), Expect = 2.9e-95
Identity = 210/615 (34.15%), Postives = 333/615 (54.15%), Query Frame = 1
Query: 3 WNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVH-CV 62
WN+++KS + + + +M + D FT P+ + +V Y M+H V
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR-EVNYGEMIHGFV 87
Query: 63 GIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCA 122
+ GSDLY ++++ +Y KC + A ++FDE+ D+V+W+SM+S + G A
Sbjct: 88 KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQA 147
Query: 123 LNLFEGMRRVFE--PNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLR 182
+ F M + P+ VT++ ++ AC + LGR + V++ G D+ L N L
Sbjct: 148 VEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 207
Query: 183 MYSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMA-GEVPLIIE 242
Y++ E V F I K+V+SW +I+ Y G +A+ +F +M G P +
Sbjct: 208 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 267
Query: 243 TLTILISATKTSDSMCLILGENLHSLAIKTGLYDSI-LRTSLLDMYAKFGELDNSTRLFN 302
L +L + D L G H LAI+ GL + + T+L+DMY K + + +F+
Sbjct: 268 VLCVLQACAAAHD---LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS 327
Query: 303 EIPNRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAG-LKPSLGILKHLIDAYAHLGALQ 362
IP + +++W A++S F NG ++E FS M +P ++ ++ + + LG L+
Sbjct: 328 RIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLE 387
Query: 363 LGRGIHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEG 422
+ H Y+I+ YG + N + SL+ +Y RCGS+ +A K F+ I +KD V WTS+I G
Sbjct: 388 QAKCFHSYVIK-YGFD-SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 447
Query: 423 YGSHGQGINALNLYHHMM-SEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIK 482
YG HG+G AL ++HM+ S EV PN VTFLS+LSACSH+GL+ EG IF M + + +
Sbjct: 448 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 507
Query: 483 PDLEHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHR 542
P+LEHY VDLL R + A I RM +I G L+GACR++ + ++A A +
Sbjct: 508 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 567
Query: 543 LLELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVS 602
L ELE ++ GYY L+SN G+W VEKLR+ V ++ K S +E+ +H FV+
Sbjct: 568 LFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVA 627
Query: 603 GDRSHCKTDQIYDLL 611
D H + + +Y LL
Sbjct: 628 DDELHPEKEPVYGLL 636
BLAST of CmoCh03G001870 vs. Swiss-Prot
Match:
PP111_ARATH (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1)
HSP 1 Score: 346.7 bits (888), Expect = 5.4e-94
Identity = 193/610 (31.64%), Postives = 346/610 (56.72%), Query Frame = 1
Query: 3 WNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVG 62
W++++ S ++G + A+ ++K M + GVE D T + + + A VH
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC-LRIARSVHGQI 229
Query: 63 IRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCAL 122
R F D CN+++ +Y+KC L + ++F+++ ++ VSWT+MIS+Y AL
Sbjct: 230 TRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKAL 289
Query: 123 NLFEGM-RRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDV-GLQNWFLRM 182
F M + EPN VT+ ++L +C + + G+ + V+ L + L + +
Sbjct: 290 RSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVEL 349
Query: 183 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 242
Y+ G + + +N+V+W+ LIS Y+ G +++A+ +F+Q++ + TL
Sbjct: 350 YAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTL 409
Query: 243 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 302
ISA + + + LG+ +H I+T + D ++ SL+DMY+K G +D+++ +FN+I
Sbjct: 410 ASSISACENAG--LVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK 469
Query: 303 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 362
+RS++TW +M+ F QNG+ EA+ +F M + L+ + +I A + +G+L+ G+
Sbjct: 470 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 529
Query: 363 IHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGSH 422
+H LI I GL+ + +T+L++MY +CG + +A F + + +V+W+SMI YG H
Sbjct: 530 VHHKLI-ISGLK--DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMH 589
Query: 423 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 482
G+ +A++ ++ M+ PN V F+++LSAC HSG V EG + ++++ F + P+ EH
Sbjct: 590 GRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEH 649
Query: 483 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 542
+ CF+DLLSRS ++EA+ I M L D +WG+L+ CR++ I + L ++
Sbjct: 650 FACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIV 709
Query: 543 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDRSH 602
D+ GYYTLLSN A G+W E +LRS + + K PG+S +E++ + F +G+ +
Sbjct: 710 TDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENR 769
Query: 603 CKTDQIYDLL 611
+TD+IY L
Sbjct: 770 IQTDEIYRFL 772
BLAST of CmoCh03G001870 vs. Swiss-Prot
Match:
PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)
HSP 1 Score: 344.7 bits (883), Expect = 2.0e-93
Identity = 189/557 (33.93%), Postives = 315/557 (56.55%), Query Frame = 1
Query: 57 MVHCVGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVG 116
++H + G S+L + ++++Y K + ARKVFD MP +D + W +MIS Y
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199
Query: 117 DIVCALNLFEGM--RRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQ 176
V ++ +F + ++ T++ +L A ++L LG I L K G +
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL 259
Query: 177 NWFLRMYSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVP 236
F+ +YS+ G F E ++V+++ +I Y+S G+ ++ +FK++M
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 237 LIIETLTILISATKTSDSMCLILGENLHSLAIKTG-LYDSILRTSLLDMYAKFGELDNST 296
L TL +S S + LI +H +K+ L + + T+L +Y+K E++++
Sbjct: 320 LRSSTL---VSLVPVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 379
Query: 297 RLFNEIPNRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLG 356
+LF+E P +S+ +W AM+S + QNG ++A+ +F +MQ + P+ + ++ A A LG
Sbjct: 380 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 439
Query: 357 ALQLGRGIHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSM 416
AL LG+ +H L+R E + ++ T+L+ MY +CGSIA AR+ FDL+ K+ V W +M
Sbjct: 440 ALSLGKWVHD-LVRSTDFE-SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTM 499
Query: 417 IEGYGSHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFN 476
I GYG HGQG ALN+++ M++ + P VTFL +L ACSH+GLV EG EIF SM R+
Sbjct: 500 ISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 559
Query: 477 IKPDLEHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAA 536
+P ++HY C VD+L R+ ++ A I M+ +W L+GACR++ D +A +
Sbjct: 560 FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVS 619
Query: 537 HRLLELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGF 596
+L EL+PDNVGY+ LLSN ++ + + +R ++ K PG++ +E+ T H F
Sbjct: 620 EKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVF 679
Query: 597 VSGDRSHCKTDQIYDLL 611
SGD+SH + +IY+ L
Sbjct: 680 TSGDQSHPQVKEIYEKL 689
BLAST of CmoCh03G001870 vs. TrEMBL
Match:
M5VVK0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002924mg PE=4 SV=1)
HSP 1 Score: 695.3 bits (1793), Expect = 6.9e-197
Identity = 351/613 (57.26%), Postives = 448/613 (73.08%), Query Frame = 1
Query: 1 MLWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 60
ML N IIKS DSGL SA++LYK M E+GV HD FTFPI+N V+ + D Y+GMVHC
Sbjct: 1 MLSNLIIKSHVDSGLLGSALLLYKKMLELGVSHDCFTFPIVNRAVLLLGSDATYSGMVHC 60
Query: 61 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 120
V I+MGFG D+Y NTM++ Y KC L +ARK+FDEM RDLV+WTSMIS YV+ G++ C
Sbjct: 61 VAIQMGFGMDVYVGNTMIDAYVKCGRLDYARKLFDEMRQRDLVTWTSMISGYVSEGNVAC 120
Query: 121 ALNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180
+LF MRR EPN+VTM+ MLQ CC E V G + +K+GLL D +QN +M
Sbjct: 121 GFSLFSEMRRELEPNAVTMLVMLQGCCDIEISVYGEPLHGYGIKSGLLNDGSVQNSIFKM 180
Query: 181 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 240
Y++LG D+ FF E+D ++VVSW+I ISFYS GD+VK D+F + M GEV ETL
Sbjct: 181 YAKLGTVDQVEDFFGELDRRDVVSWNIRISFYSWRGDVVKVRDLFHE-MQGEVAPSNETL 240
Query: 241 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 300
T++ISA L GE+LH LA K+GL D +L+TSLLD YAK GEL NS +LF EIP
Sbjct: 241 TLVISAVTKHG--ILSQGESLHCLATKSGLCDDVLQTSLLDFYAKCGELGNSDKLFREIP 300
Query: 301 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360
+R+ ITWGAMM FI NG+F+EAV +F +MQA G++P IL+ L+DA+A++GAL+LG+G
Sbjct: 301 HRNSITWGAMMFGFILNGYFNEAVGLFGRMQAEGVEPGAEILRSLVDAFANIGALKLGKG 360
Query: 361 IHCYLIRIYGLEI--CNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG 420
IH +IR E+ CNTHLETSL+NMYVRCGSI+ AR CF ++++D+VAWTSMIEGYG
Sbjct: 361 IHGCIIRKSFCEVKKCNTHLETSLINMYVRCGSISMARVCFSRMLIRDIVAWTSMIEGYG 420
Query: 421 SHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDL 480
SHG G+ AL L+ M+ E PNSVT LSLLSACSHSGLV+EGCE F SM+ +F I+PDL
Sbjct: 421 SHGLGLEALKLFDLMIREGTKPNSVTLLSLLSACSHSGLVTEGCEAFCSMKWKFGIEPDL 480
Query: 481 EHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLE 540
+HYT VDLL RS +++EA +I++M D RIWGAL+ R+YG + +AA RLLE
Sbjct: 481 DHYTSIVDLLGRSGKLKEALVVIMKMVIFPDSRIWGALLSGSRIYGRRDVGEFAAQRLLE 540
Query: 541 LEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVEL-NGTLHGFVSGD 600
LEPDNVGYYTLLSN QASVG+W EVE++R V+ E+D KKPGWS +E G ++GFVSGD
Sbjct: 541 LEPDNVGYYTLLSNAQASVGEWDEVEEIRRVMKERDLKKKPGWSCIEAEEGRIYGFVSGD 600
Query: 601 RSHCKTDQIYDLL 611
RSH + + +Y++L
Sbjct: 601 RSHHQMEAVYEVL 610
BLAST of CmoCh03G001870 vs. TrEMBL
Match:
A0A0L9TUF7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g028600 PE=4 SV=1)
HSP 1 Score: 637.1 bits (1642), Expect = 2.2e-179
Identity = 328/612 (53.59%), Postives = 429/612 (70.10%), Query Frame = 1
Query: 2 LWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCV 61
+WN I++S D GLF S + +YK MR+ GV HD FTFP+LN + S+ DVVY M+HCV
Sbjct: 1 MWNLIMRSHVDLGLFHSVLSVYKKMRQKGVPHDTFTFPLLNRALSSMRADVVYGKMIHCV 60
Query: 62 GIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCA 121
+MG DLYFCNTM++VY KC C+ AR++FDE+ RD+VSWT MI+ YV+ + A
Sbjct: 61 ATKMGLDGDLYFCNTMIDVYVKCGCIACARRMFDEISLRDVVSWTLMIAGYVSQRLVSVA 120
Query: 122 LNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMY 181
LF MR EPNSVT++ MLQA C + L G I +K+GLL D ++N LRMY
Sbjct: 121 FRLFNKMRMELEPNSVTLIVMLQAPCASIKLSEGTQIHGYALKSGLLMDWSVKNSVLRMY 180
Query: 182 SRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLI-IETL 241
GG E F E++ K+VVSW+ILISFYSS GD + + K + + EV + IETL
Sbjct: 181 GSKGGTREVELLFGEVNMKDVVSWNILISFYSSEGDATRVAGLLKAMQSLEVHVWNIETL 240
Query: 242 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 301
T++ SA S S L GE +H L +KTG D + TSLLD YAK G+L+ S LF+EI
Sbjct: 241 TLVTSAFAKSGS--LSEGEGVHCLVVKTGFSDDVWLTSLLDFYAKCGKLETSVLLFSEIH 300
Query: 302 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 361
++S ITW AMMS FIQNG F EA+ +F +MQA I ++L+DAYA+LGAL+LG+
Sbjct: 301 SKSKITWCAMMSGFIQNGSFMEAIVLFQRMQAEDFNVVPEIWRNLLDAYANLGALKLGKE 360
Query: 362 IHCYLIR-IYGLEICNT-HLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG 421
+H YLI+ ++ I N+ HLETS++NMY+R GS++SA+ CFD++ VKDVVAWT+MI+G G
Sbjct: 361 VHGYLIKNLFNGAIENSVHLETSILNMYLRGGSMSSAKTCFDMMSVKDVVAWTTMIDGLG 420
Query: 422 SHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDL 481
SHG G +AL ++ M+ + V PNSVTFLSLLSACSHSGLVSEGC I++SM+ F I+P L
Sbjct: 421 SHGFGFDALKYFNLMIEQRVQPNSVTFLSLLSACSHSGLVSEGCNIYHSMKWGFGIEPTL 480
Query: 482 EHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLE 541
+H+TC VDL R ++EA AII +M L D +IW AL+ A RVYG+ K YAA RLLE
Sbjct: 481 DHHTCIVDLFGRCGMLKEALAIIFKMVILPDSKIWSALLAASRVYGNKKFGEYAAQRLLE 540
Query: 542 LEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDR 601
LEPDN GYYTLLSN +ASVG+W EVEKLR + E+D KKPGWS +E+ G++ GFVSGD+
Sbjct: 541 LEPDNAGYYTLLSNVKASVGRWEEVEKLRRDMRERDLKKKPGWSCIEVAGSIRGFVSGDK 600
Query: 602 SHCKTDQIYDLL 611
SH + ++IY+ L
Sbjct: 601 SHPEAEEIYEAL 610
BLAST of CmoCh03G001870 vs. TrEMBL
Match:
A0A0S3SU84_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G334900 PE=4 SV=1)
HSP 1 Score: 637.1 bits (1642), Expect = 2.2e-179
Identity = 328/612 (53.59%), Postives = 429/612 (70.10%), Query Frame = 1
Query: 2 LWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCV 61
+WN I++S D GLF S + +YK MR+ GV HD FTFP+LN + S+ DVVY M+HCV
Sbjct: 1 MWNLIMRSHVDLGLFHSVLSVYKKMRQKGVPHDTFTFPLLNRALSSMRADVVYGKMIHCV 60
Query: 62 GIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCA 121
+MG DLYFCNTM++VY KC C+ AR++FDE+ RD+VSWT MI+ YV+ + A
Sbjct: 61 ATKMGLDGDLYFCNTMIDVYVKCGCIACARRMFDEISLRDVVSWTLMIAGYVSQRLVSVA 120
Query: 122 LNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMY 181
LF MR EPNSVT++ MLQA C + L G I +K+GLL D ++N LRMY
Sbjct: 121 FRLFNKMRMELEPNSVTLIVMLQAPCASIKLSEGTQIHGYALKSGLLMDWSVKNSVLRMY 180
Query: 182 SRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLI-IETL 241
GG E F E++ K+VVSW+ILISFYSS GD + + K + + EV + IETL
Sbjct: 181 GSKGGTREVELLFGEVNMKDVVSWNILISFYSSEGDATRVAGLLKAMQSLEVHVWNIETL 240
Query: 242 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 301
T++ SA S S L GE +H L +KTG D + TSLLD YAK G+L+ S LF+EI
Sbjct: 241 TLVTSAFAKSGS--LSEGEGVHCLVVKTGFSDDVWLTSLLDFYAKCGKLETSVLLFSEIH 300
Query: 302 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 361
++S ITW AMMS FIQNG F EA+ +F +MQA I ++L+DAYA+LGAL+LG+
Sbjct: 301 SKSKITWCAMMSGFIQNGSFMEAIVLFQRMQAEDFNVVPEIWRNLLDAYANLGALKLGKE 360
Query: 362 IHCYLIR-IYGLEICNT-HLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG 421
+H YLI+ ++ I N+ HLETS++NMY+R GS++SA+ CFD++ VKDVVAWT+MI+G G
Sbjct: 361 VHGYLIKNLFNGAIENSVHLETSILNMYLRGGSMSSAKTCFDMMSVKDVVAWTTMIDGLG 420
Query: 422 SHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDL 481
SHG G +AL ++ M+ + V PNSVTFLSLLSACSHSGLVSEGC I++SM+ F I+P L
Sbjct: 421 SHGFGFDALKYFNLMIEQRVQPNSVTFLSLLSACSHSGLVSEGCNIYHSMKWGFGIEPTL 480
Query: 482 EHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLE 541
+H+TC VDL R ++EA AII +M L D +IW AL+ A RVYG+ K YAA RLLE
Sbjct: 481 DHHTCIVDLFGRCGMLKEALAIIFKMVILPDSKIWSALLAASRVYGNKKFGEYAAQRLLE 540
Query: 542 LEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDR 601
LEPDN GYYTLLSN +ASVG+W EVEKLR + E+D KKPGWS +E+ G++ GFVSGD+
Sbjct: 541 LEPDNAGYYTLLSNVKASVGRWEEVEKLRRDMRERDLKKKPGWSCIEVAGSIRGFVSGDK 600
Query: 602 SHCKTDQIYDLL 611
SH + ++IY+ L
Sbjct: 601 SHPEAEEIYEAL 610
BLAST of CmoCh03G001870 vs. TrEMBL
Match:
B9T607_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0160700 PE=4 SV=1)
HSP 1 Score: 634.4 bits (1635), Expect = 1.4e-178
Identity = 323/595 (54.29%), Postives = 414/595 (69.58%), Query Frame = 1
Query: 3 WNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVG 62
WN I+++ D GL A++LYK MRE GV+ D FTFP +N VMS+ DV+ MVHC
Sbjct: 96 WNLIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDA 155
Query: 63 IRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCAL 122
+++GFG DLYFCNTM+EVYA+C C+ + R +FDEM RDLVSWTSMIS YV+ G++ A
Sbjct: 156 MKLGFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAF 215
Query: 123 NLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYS 182
LF MR EPNSVT++ ML+ C ++ GR + C ++KNGLL +QN LRMYS
Sbjct: 216 ELFNKMRLEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYS 275
Query: 183 RLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTI 242
G E F EI ++V+SW+ LI FY+ GD + V F Q M GEV L ETLT+
Sbjct: 276 ITGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQ-MRGEVALSSETLTL 335
Query: 243 LISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNR 302
+IS + L+ GE LHS +IK GL D +L SLLD YAK GEL NS +LF EIP R
Sbjct: 336 VISVFAKIGN--LVEGEKLHSFSIKVGLCDDVLLASLLDFYAKCGELRNSVQLFGEIPCR 395
Query: 303 SIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIH 362
S TW MMS IQNG+FDEA+ +F QMQA+G++ IL L+DA +HLG+LQL + IH
Sbjct: 396 SSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIH 455
Query: 363 CYLIR--IYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGSH 422
YL R Y LE N HL TS++NMY+RCGSI+SAR+ F+ ++ KD + WTSMIEGYG H
Sbjct: 456 GYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIH 515
Query: 423 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 482
G I AL L++ M+ E V PN VTFLSLLSACSHSGL+ +GCE+F SM+ F ++PDL+H
Sbjct: 516 GMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDH 575
Query: 483 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 542
YTC VDLL R +++EA A+I+RM + D RIWGAL+ +CRV+GD K+ +AA RLLE+E
Sbjct: 576 YTCMVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLEME 635
Query: 543 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVS 596
DNVGYYTLLSN QA VG+W EVE++R V++EKD K PGWS + G + F+S
Sbjct: 636 SDNVGYYTLLSNIQAMVGKWDEVEQVRKVIHEKDLRKTPGWSCIVGKGRNYCFIS 687
BLAST of CmoCh03G001870 vs. TrEMBL
Match:
A0A061FB60_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_033552 PE=4 SV=1)
HSP 1 Score: 625.2 bits (1611), Expect = 8.7e-176
Identity = 317/612 (51.80%), Postives = 426/612 (69.61%), Query Frame = 1
Query: 3 WNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVG 62
WN IIKS D G A+ LY+ MR+ GV+HD FTFPI+N V SI D +A ++HCV
Sbjct: 61 WNLIIKSHVDFGYIEKALFLYRKMRKEGVKHDRFTFPIINRAVRSINADAEFAKLIHCVA 120
Query: 63 IRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCAL 122
++MGFG DLYF NTM+E+Y KC C +A K+FDEM RDLV+WTSMIS G++ A
Sbjct: 121 VKMGFGFDLYFGNTMVEIYGKCGCFSNAYKMFDEMFERDLVTWTSMISGCFYEGNVAEAF 180
Query: 123 NLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYS 182
LF+ MR EPN+VT++ +LQ C + G+ V+K+G+L D + N L+MY+
Sbjct: 181 TLFKKMRLEMEPNAVTVIVLLQGCSRWGSFIGGKQTHGYVIKSGVLADGSVLNSVLKMYT 240
Query: 183 RLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTI 242
+G +E FF EI +++VSW+ LIS+YS GD+ + D F ++ EV + +ETLT+
Sbjct: 241 TMGSVEEVETFFREIFQRDIVSWNTLISYYSLRGDVGEVADRFCKMQV-EVKVSMETLTL 300
Query: 243 LISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNR 302
+ISA S + L GE LH A+K GL+D +L+TSLLD YAK G L NS +LF I +R
Sbjct: 301 VISAFAKSGN--LSQGEILHCCALKLGLHDDVLQTSLLDFYAKCGLLKNSIQLFKGISSR 360
Query: 303 SIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIH 362
+ I W AM+S +IQNG F EA+ +F +MQAAGL P+ IL +++ A AH+GAL++G+ +H
Sbjct: 361 NSIAWSAMLSGYIQNGFFKEAIVLFKEMQAAGLHPTPEILGNIVHACAHVGALEVGKEMH 420
Query: 363 CYLIRIY----GLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG 422
Y I+ E LETS++NMY+R GSI+SAR CF+ ++VKD+VAWTSMIEGYG
Sbjct: 421 GYSIKNMFHSPKKEGTYLELETSILNMYIRNGSISSARACFNRMLVKDIVAWTSMIEGYG 480
Query: 423 SHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDL 482
HG G +AL L+ M+ E PN VTFLSLLSACSHSGLVSEGC +FYSM+ RF+I+PDL
Sbjct: 481 IHGLGSDALKLFDQMVEEGATPNCVTFLSLLSACSHSGLVSEGCYVFYSMKWRFSIEPDL 540
Query: 483 EHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLE 542
+HYTC VDLL R+ +++EA A I++M D RIWGAL+ RV+G K+ YAA RLLE
Sbjct: 541 DHYTCMVDLLGRAGKLKEALATIMKMLAFPDSRIWGALLAGSRVHGHKKVGEYAAQRLLE 600
Query: 543 LEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDR 602
LE DNVGY+TLLSN QAS GQW EVE++R ++EK+ K+PGWS++ N +H FV GD+
Sbjct: 601 LESDNVGYHTLLSNVQASTGQWAEVEEVRRAMFEKNLKKQPGWSYIAENKHIHCFVCGDK 660
Query: 603 SHCKTDQIYDLL 611
SH + ++IY++L
Sbjct: 661 SHNQVEEIYEVL 669
BLAST of CmoCh03G001870 vs. TAIR10
Match:
AT4G35130.1 (AT4G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 392.1 bits (1006), Expect = 6.3e-109
Identity = 216/617 (35.01%), Postives = 354/617 (57.37%), Query Frame = 1
Query: 2 LWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCV 61
LWN +IK GL++ A+ Y M GV+ D FT+P + V I + +H +
Sbjct: 97 LWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGI-SSLEEGKKIHAM 156
Query: 62 GIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCA 121
I++GF SD+Y CN+++ +Y K C A KVF+EMP RD+VSW SMIS Y+ +GD +
Sbjct: 157 VIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSS 216
Query: 122 LNLFEGMRRV-FEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGL-LFDVGLQNWFLR 181
L LF+ M + F+P+ + M+ L AC +G+ I C V++ + DV + L
Sbjct: 217 LMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILD 276
Query: 182 MYSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMA--GEVPLII 241
MYS+ G R F+ + +N+V+W+++I Y+ G + A F+++ G P +I
Sbjct: 277 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 336
Query: 242 ETLTILISATKTSDSMCLILGENLHSLAIKTG-LYDSILRTSLLDMYAKFGELDNSTRLF 301
++ +L ++ ++ G +H A++ G L +L T+L+DMY + G+L ++ +F
Sbjct: 337 TSINLLPASA-------ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIF 396
Query: 302 NEIPNRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQ 361
+ + +++I+W +++++++QNG A+E+F ++ + L P + ++ AYA +L
Sbjct: 397 DRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLS 456
Query: 362 LGRGIHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEG 421
GR IH Y+++ NT + SL++MY CG + ARKCF+ I++KDVV+W S+I
Sbjct: 457 EGREIHAYIVK--SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 516
Query: 422 YGSHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKP 481
Y HG G ++ L+ M++ V PN TF SLL+ACS SG+V EG E F SM+ + I P
Sbjct: 517 YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDP 576
Query: 482 DLEHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRL 541
+EHY C +DL+ R+ A + M + RIWG+L+ A R + D IA +AA ++
Sbjct: 577 GIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQI 636
Query: 542 LELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSG 601
++E DN G Y LL N A G+W +V +++ ++ K + S VE G H F +G
Sbjct: 637 FKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNG 696
Query: 602 DRSHCKTDQIYDLLIIV 614
DRSH T++IY++L +V
Sbjct: 697 DRSHVATNKIYEVLDVV 703
BLAST of CmoCh03G001870 vs. TAIR10
Match:
AT3G03580.1 (AT3G03580.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 355.9 bits (912), Expect = 5.0e-98
Identity = 202/617 (32.74%), Postives = 345/617 (55.92%), Query Frame = 1
Query: 3 WNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVG 62
WNS+I G + A+ +Y ++ + D FT + ++ V G+ H
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL-HGFA 234
Query: 63 IRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCAL 122
++ G S + N ++ +Y K AR+VFDEM RD VS+ +MI Y+ + + ++
Sbjct: 235 LKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESV 294
Query: 123 NLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYS 182
+F F+P+ +T+ ++L+AC DL L + I ++K G + + ++N + +Y+
Sbjct: 295 RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYA 354
Query: 183 RLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTI 242
+ G F+ ++CK+ VSW+ +IS Y GD+++A+ +FK +M E T +
Sbjct: 355 KCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLM 414
Query: 243 LIS-ATKTSDSMCLILGENLHSLAIKTGL-YDSILRTSLLDMYAKFGELDNSTRLFNEIP 302
LIS +T+ +D L G+ LHS IK+G+ D + +L+DMYAK GE+ +S ++F+ +
Sbjct: 415 LISVSTRLAD---LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 474
Query: 303 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 362
+TW ++S+ ++ G F +++ +QM+ + + P + + A L A +LG+
Sbjct: 475 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 534
Query: 363 IHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGSH 422
IHC L+R +G E + +L+ MY +CG + ++ + F+ + +DVV WT MI YG +
Sbjct: 535 IHCCLLR-FGYE-SELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMY 594
Query: 423 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 482
G+G AL + M + P+SV F++++ ACSHSGLV EG F M++ + I P +EH
Sbjct: 595 GEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEH 654
Query: 483 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 542
Y C VDLLSRS ++ +A I M D IW +++ ACR GD + A + R++EL
Sbjct: 655 YACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN 714
Query: 543 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDRSH 602
PD+ GY L SN A++ +W +V +R + +K K PG+S++E+ +H F SGD S
Sbjct: 715 PDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSA 774
Query: 603 CKTDQIYDLLIIVYGLL 618
+++ IY L I+Y L+
Sbjct: 775 PQSEAIYKSLEILYSLM 785
BLAST of CmoCh03G001870 vs. TAIR10
Match:
AT3G01580.1 (AT3G01580.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 350.9 bits (899), Expect = 1.6e-96
Identity = 210/615 (34.15%), Postives = 333/615 (54.15%), Query Frame = 1
Query: 3 WNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVH-CV 62
WN+++KS + + + +M + D FT P+ + +V Y M+H V
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR-EVNYGEMIHGFV 87
Query: 63 GIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCA 122
+ GSDLY ++++ +Y KC + A ++FDE+ D+V+W+SM+S + G A
Sbjct: 88 KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQA 147
Query: 123 LNLFEGMRRVFE--PNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLR 182
+ F M + P+ VT++ ++ AC + LGR + V++ G D+ L N L
Sbjct: 148 VEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 207
Query: 183 MYSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMA-GEVPLIIE 242
Y++ E V F I K+V+SW +I+ Y G +A+ +F +M G P +
Sbjct: 208 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 267
Query: 243 TLTILISATKTSDSMCLILGENLHSLAIKTGLYDSI-LRTSLLDMYAKFGELDNSTRLFN 302
L +L + D L G H LAI+ GL + + T+L+DMY K + + +F+
Sbjct: 268 VLCVLQACAAAHD---LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS 327
Query: 303 EIPNRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAG-LKPSLGILKHLIDAYAHLGALQ 362
IP + +++W A++S F NG ++E FS M +P ++ ++ + + LG L+
Sbjct: 328 RIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLE 387
Query: 363 LGRGIHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEG 422
+ H Y+I+ YG + N + SL+ +Y RCGS+ +A K F+ I +KD V WTS+I G
Sbjct: 388 QAKCFHSYVIK-YGFD-SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 447
Query: 423 YGSHGQGINALNLYHHMM-SEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIK 482
YG HG+G AL ++HM+ S EV PN VTFLS+LSACSH+GL+ EG IF M + + +
Sbjct: 448 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 507
Query: 483 PDLEHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHR 542
P+LEHY VDLL R + A I RM +I G L+GACR++ + ++A A +
Sbjct: 508 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 567
Query: 543 LLELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVS 602
L ELE ++ GYY L+SN G+W VEKLR+ V ++ K S +E+ +H FV+
Sbjct: 568 LFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVA 627
Query: 603 GDRSHCKTDQIYDLL 611
D H + + +Y LL
Sbjct: 628 DDELHPEKEPVYGLL 636
BLAST of CmoCh03G001870 vs. TAIR10
Match:
AT1G69350.1 (AT1G69350.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 346.7 bits (888), Expect = 3.0e-95
Identity = 193/610 (31.64%), Postives = 346/610 (56.72%), Query Frame = 1
Query: 3 WNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVG 62
W++++ S ++G + A+ ++K M + GVE D T + + + A VH
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC-LRIARSVHGQI 229
Query: 63 IRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCAL 122
R F D CN+++ +Y+KC L + ++F+++ ++ VSWT+MIS+Y AL
Sbjct: 230 TRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKAL 289
Query: 123 NLFEGM-RRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDV-GLQNWFLRM 182
F M + EPN VT+ ++L +C + + G+ + V+ L + L + +
Sbjct: 290 RSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVEL 349
Query: 183 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 242
Y+ G + + +N+V+W+ LIS Y+ G +++A+ +F+Q++ + TL
Sbjct: 350 YAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTL 409
Query: 243 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 302
ISA + + + LG+ +H I+T + D ++ SL+DMY+K G +D+++ +FN+I
Sbjct: 410 ASSISACENAG--LVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK 469
Query: 303 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 362
+RS++TW +M+ F QNG+ EA+ +F M + L+ + +I A + +G+L+ G+
Sbjct: 470 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 529
Query: 363 IHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGSH 422
+H LI I GL+ + +T+L++MY +CG + +A F + + +V+W+SMI YG H
Sbjct: 530 VHHKLI-ISGLK--DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMH 589
Query: 423 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 482
G+ +A++ ++ M+ PN V F+++LSAC HSG V EG + ++++ F + P+ EH
Sbjct: 590 GRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEH 649
Query: 483 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 542
+ CF+DLLSRS ++EA+ I M L D +WG+L+ CR++ I + L ++
Sbjct: 650 FACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIV 709
Query: 543 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDRSH 602
D+ GYYTLLSN A G+W E +LRS + + K PG+S +E++ + F +G+ +
Sbjct: 710 TDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENR 769
Query: 603 CKTDQIYDLL 611
+TD+IY L
Sbjct: 770 IQTDEIYRFL 772
BLAST of CmoCh03G001870 vs. TAIR10
Match:
AT4G30700.1 (AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 344.7 bits (883), Expect = 1.2e-94
Identity = 189/557 (33.93%), Postives = 315/557 (56.55%), Query Frame = 1
Query: 57 MVHCVGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVG 116
++H + G S+L + ++++Y K + ARKVFD MP +D + W +MIS Y
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199
Query: 117 DIVCALNLFEGM--RRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQ 176
V ++ +F + ++ T++ +L A ++L LG I L K G +
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL 259
Query: 177 NWFLRMYSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVP 236
F+ +YS+ G F E ++V+++ +I Y+S G+ ++ +FK++M
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 237 LIIETLTILISATKTSDSMCLILGENLHSLAIKTG-LYDSILRTSLLDMYAKFGELDNST 296
L TL +S S + LI +H +K+ L + + T+L +Y+K E++++
Sbjct: 320 LRSSTL---VSLVPVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 379
Query: 297 RLFNEIPNRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLG 356
+LF+E P +S+ +W AM+S + QNG ++A+ +F +MQ + P+ + ++ A A LG
Sbjct: 380 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 439
Query: 357 ALQLGRGIHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSM 416
AL LG+ +H L+R E + ++ T+L+ MY +CGSIA AR+ FDL+ K+ V W +M
Sbjct: 440 ALSLGKWVHD-LVRSTDFE-SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTM 499
Query: 417 IEGYGSHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFN 476
I GYG HGQG ALN+++ M++ + P VTFL +L ACSH+GLV EG EIF SM R+
Sbjct: 500 ISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 559
Query: 477 IKPDLEHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAA 536
+P ++HY C VD+L R+ ++ A I M+ +W L+GACR++ D +A +
Sbjct: 560 FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVS 619
Query: 537 HRLLELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGF 596
+L EL+PDNVGY+ LLSN ++ + + +R ++ K PG++ +E+ T H F
Sbjct: 620 EKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVF 679
Query: 597 VSGDRSHCKTDQIYDLL 611
SGD+SH + +IY+ L
Sbjct: 680 TSGDQSHPQVKEIYEKL 689
BLAST of CmoCh03G001870 vs. NCBI nr
Match:
gi|659115504|ref|XP_008457590.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis melo])
HSP 1 Score: 1060.1 bits (2740), Expect = 1.5e-306
Identity = 515/614 (83.88%), Postives = 560/614 (91.21%), Query Frame = 1
Query: 1 MLWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 60
MLWN++IKS FDSGLF SA++LYKNMREV VEHDGFT PI+N V++SIWVDVVY GMVHC
Sbjct: 1 MLWNNVIKSHFDSGLFHSALLLYKNMREVRVEHDGFTLPIVNQVILSIWVDVVYGGMVHC 60
Query: 61 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 120
VGIRMGF SDLYFCNTMMEVY KC CL AR VFDEMPNRDLVSWTSMISAYV GD+ C
Sbjct: 61 VGIRMGFSSDLYFCNTMMEVYGKCGCLVSARDVFDEMPNRDLVSWTSMISAYVKGGDVFC 120
Query: 121 ALNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180
AL++FEGMRR EPNSVT++ MLQACC T++LVLGRL+QC VVKNGLLFD GLQN FLRM
Sbjct: 121 ALDIFEGMRRELEPNSVTVIVMLQACCATQNLVLGRLLQCYVVKNGLLFDTGLQNSFLRM 180
Query: 181 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 240
YSRLGGEDE V FFSEID KNVVSW+IL+SFYSS+GDIVK VDI +IM GEVPL IETL
Sbjct: 181 YSRLGGEDEVVAFFSEIDFKNVVSWNILMSFYSSMGDIVKVVDILNKIM-GEVPLSIETL 240
Query: 241 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 300
TILIS TSDS CLILGENLHSLAIK+GLYD IL TSLLDMYAKFGEL+NSTRLF EIP
Sbjct: 241 TILISGIATSDSGCLILGENLHSLAIKSGLYDDILCTSLLDMYAKFGELENSTRLFKEIP 300
Query: 301 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360
NRSIITWGAMMSSFIQNGHFD+AV+IF QMQ AGLKPS+GILKHLIDAYA+LGALQLG+
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDDAVDIFKQMQVAGLKPSVGILKHLIDAYAYLGALQLGKA 360
Query: 361 IHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGSH 420
IHC+LIRIYGL +CNT LETS++NMYVRCGSIASARKCFDLI++KDVVAWTSMIEGYG+H
Sbjct: 361 IHCHLIRIYGLVVCNTRLETSVLNMYVRCGSIASARKCFDLILIKDVVAWTSMIEGYGAH 420
Query: 421 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 480
G GI+ALNL+H M SEEV PN+VTFLSLLSACSHSGLVSEGC IFYSMRSRFNIKPDLEH
Sbjct: 421 GLGIDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCGIFYSMRSRFNIKPDLEH 480
Query: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 540
YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIA YAAHRLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIANYAAHRLLELE 540
Query: 541 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDRSH 600
PDNVGYYTLLSN+QASVGQWHE EKLRS+VYEK+ KKPGWSF+ELNGT+HGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKNLAKKPGWSFIELNGTIHGFVSGDRSH 600
Query: 601 CKTDQIYDLLIIVY 615
K ++IYDLL+ +Y
Sbjct: 601 YKANEIYDLLVYIY 613
BLAST of CmoCh03G001870 vs. NCBI nr
Match:
gi|694428826|ref|XP_009341960.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g15510, chloroplastic-like [Pyrus x bretschneideri])
HSP 1 Score: 718.0 bits (1852), Expect = 1.4e-203
Identity = 357/612 (58.33%), Postives = 454/612 (74.18%), Query Frame = 1
Query: 1 MLWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 60
MLWN ++KS + GL SA++LYK MRE+GV HD FTFPI+N VVM + +V YAGMVHC
Sbjct: 112 MLWNLMMKSHVECGLVDSALLLYKKMRELGVSHDCFTFPIVNRVVMLLGGEVGYAGMVHC 171
Query: 61 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 120
V I+MGFG D+YF NTM++ Y KC + HAR +FDEM RDLVSWTSMIS YV+ G++ C
Sbjct: 172 VAIQMGFGMDVYFGNTMIDFYVKCGAIDHARMLFDEMCQRDLVSWTSMISGYVSEGNVAC 231
Query: 121 ALNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180
L+LF MR EPNSVTM+ MLQ CC TE + G V+KNGLL+D +QN LRM
Sbjct: 232 GLSLFNEMRLELEPNSVTMLIMLQGCCGTESAICGSQFHGYVIKNGLLYDASVQNSILRM 291
Query: 181 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 240
Y++LG +E FFSE+D ++VVSW+I IS +SS GD+ K ++F M G+V +ETL
Sbjct: 292 YAKLGTINEVEGFFSELDRRDVVSWNICISIFSSRGDVAKVRELFND-MQGKVAPGVETL 351
Query: 241 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 300
T++ISA L GE+LH LAIK GL D +L+TSLLD+YAK GEL S RLF EIP
Sbjct: 352 TLVISALAKHG--ILSQGESLHCLAIKRGLCDHVLQTSLLDLYAKCGELGISDRLFREIP 411
Query: 301 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360
+R+ ITWGAMM FIQNG F+EAV + +MQA+G +P IL+ L+DA+A+LGAL+LG+
Sbjct: 412 HRNTITWGAMMFGFIQNGWFNEAVGLLREMQASGPEPRAEILRSLVDAFANLGALKLGKQ 471
Query: 361 IHCYLIR--IYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG 420
IH Y+IR +Y + THLETS++NMY+RCGS+++AR CFD ++VKD+V WTSMIEGYG
Sbjct: 472 IHGYIIRKSLYEGDESYTHLETSIINMYIRCGSLSAARVCFDRMLVKDIVTWTSMIEGYG 531
Query: 421 SHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDL 480
SHG G AL L+ M+ E + PNSVTF+SLLSACSHSGLV+EGC+ FYSM+ +F I+PDL
Sbjct: 532 SHGLGFEALKLFDLMIREGIRPNSVTFISLLSACSHSGLVTEGCDAFYSMKWKFGIEPDL 591
Query: 481 EHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLE 540
+HYT VDLL RS +++EA A+I++M D RIWGAL+ CR+Y + YAA RLLE
Sbjct: 592 DHYTSIVDLLGRSGKLKEALAVIMKMMTFPDSRIWGALLSGCRIYSLRDVGEYAAQRLLE 651
Query: 541 LEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDR 600
LEPDN GYYTLLSNTQASVGQW EVE+ R V+ E D K PGWS +E G ++GFVSGDR
Sbjct: 652 LEPDNAGYYTLLSNTQASVGQWDEVEETRRVMSEMDLKKMPGWSCIEAEGRIYGFVSGDR 711
Query: 601 SHCKTDQIYDLL 611
SH + ++IY++L
Sbjct: 712 SHHQVEEIYEVL 720
BLAST of CmoCh03G001870 vs. NCBI nr
Match:
gi|645271147|ref|XP_008240777.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like [Prunus mume])
HSP 1 Score: 703.7 bits (1815), Expect = 2.8e-199
Identity = 357/613 (58.24%), Postives = 450/613 (73.41%), Query Frame = 1
Query: 1 MLWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 60
MLWN IIKS DSGL SA++LYK M ++GV HD FTFPI+N V+ + D Y+GMVHC
Sbjct: 102 MLWNLIIKSHVDSGLLGSALLLYKKMLQLGVSHDCFTFPIVNRAVLLLGSDATYSGMVHC 161
Query: 61 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 120
V I+MGFG DLY NTM++VY KC L +ARK+FDEM RDLVSWTSMIS YV+ G++ C
Sbjct: 162 VAIQMGFGMDLYVGNTMIDVYVKCGRLDYARKLFDEMRQRDLVSWTSMISGYVSEGNVAC 221
Query: 121 ALNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180
+LF MRR EPN+VTM+ MLQ CC E V G + +K+GLL D +QN RM
Sbjct: 222 GFSLFSEMRRELEPNAVTMLVMLQGCCDIEISVYGEPLHGYGIKSGLLGDGSVQNSIFRM 281
Query: 181 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 240
Y++LG D+ FF ++D ++VVSW+I ISFYS GD+VK D+F + M GEV ETL
Sbjct: 282 YAKLGTVDQVEDFFGQLDRRDVVSWNIRISFYSWRGDVVKVRDLFHE-MQGEVAPSSETL 341
Query: 241 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 300
T++ISA L GE+LH LA K+GL D IL+TSLLD YAK GEL NS +LF EIP
Sbjct: 342 TLVISALTKHG--ILSQGESLHCLATKSGLCDDILQTSLLDFYAKCGELGNSDKLFREIP 401
Query: 301 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360
+R+ ITWGAMM FIQNG+F+EAV +F +MQA G++P IL+ L+DA+A+LGAL+LG+G
Sbjct: 402 HRNSITWGAMMFGFIQNGYFNEAVRLFGRMQAEGVEPGAEILRGLVDAFANLGALKLGKG 461
Query: 361 IHCYLIRIYGLEI--CNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG 420
IH +IR E CNTHLETSL+NMY+RCGSI++AR CF ++++DVVAWTSMIEGYG
Sbjct: 462 IHGCIIRKSFCEAKKCNTHLETSLINMYIRCGSISTARVCFSRMLIRDVVAWTSMIEGYG 521
Query: 421 SHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDL 480
SHG G+ AL L+ M+ E PNSVT LSLLSACSHSGLV+EGCE F SM+ +F I+PDL
Sbjct: 522 SHGLGLEALKLFDLMIREGTKPNSVTLLSLLSACSHSGLVTEGCEAFCSMKWKFGIEPDL 581
Query: 481 EHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLE 540
+HYT VDLL RS +++EA +I++M D RIWGAL+ R+YG + +AA RLLE
Sbjct: 582 DHYTSIVDLLGRSGKLKEALVVIMKMVIFPDSRIWGALLSGSRIYGRRDVGEFAAQRLLE 641
Query: 541 LEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVEL-NGTLHGFVSGD 600
LEPDNVGY TLLSN QASVG+W EVE++R V+ E+D KKPGWS +E G ++GFVSGD
Sbjct: 642 LEPDNVGYCTLLSNAQASVGEWDEVEEIRRVMKERDLKKKPGWSCIEAEEGRIYGFVSGD 701
Query: 601 RSHCKTDQIYDLL 611
RSH + + IY++L
Sbjct: 702 RSHHQMEAIYEVL 711
BLAST of CmoCh03G001870 vs. NCBI nr
Match:
gi|1009159814|ref|XP_015898019.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like, partial [Ziziphus jujuba])
HSP 1 Score: 701.0 bits (1808), Expect = 1.8e-198
Identity = 355/613 (57.91%), Postives = 457/613 (74.55%), Query Frame = 1
Query: 3 WNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVG 62
WN IIKS + G SA +LY+ M E+GV HD FTFPI+N + + +DV+YAGMVHC+
Sbjct: 121 WNLIIKSHVEFGHLESAFLLYRKMHELGVAHDVFTFPIVNKALSLLRIDVLYAGMVHCLA 180
Query: 63 IRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCAL 122
+MGF D+YF NTM+E+Y KC C+ +ARK+FDEM +RDLVSWT+MIS YV+ G+ +CAL
Sbjct: 181 NQMGFVLDVYFGNTMIELYVKCGCVYYARKLFDEMCHRDLVSWTAMISGYVSEGNFICAL 240
Query: 123 NLFEGMRRV-FEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMY 182
N F MR + EPN+VTMM +LQ CC T + GR + C + KNGLL D LQN L+MY
Sbjct: 241 NFFREMRMLDLEPNAVTMMVVLQGCCGTGSSIYGRQLHCYLFKNGLLMDGSLQNSILKMY 300
Query: 183 SRLGGEDEFVRFFSEIDCK-NVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 242
++LG +E F E+D + +VV W++LISFYSSVGD VKA+ +F + M EV IETL
Sbjct: 301 TKLGTINEVESFSREVDRRRDVVYWNVLISFYSSVGDAVKAIGMFNK-MRLEVETSIETL 360
Query: 243 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 302
T +ISA S + L GE LH LAIK+G D +L+TSLLD+YAK GEL S RLF EI
Sbjct: 361 TSVISAVGKSGN--LFQGEKLHCLAIKSGHLDDVLQTSLLDLYAKCGELGKSERLFKEIR 420
Query: 303 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 362
+R+ ITW A+MS FIQNG+F+EAVE+F QMQA L+PS L++L+DAY +LGALQLG+
Sbjct: 421 HRNNITWSAIMSGFIQNGYFNEAVELFHQMQATDLEPSSENLRNLVDAYTNLGALQLGKR 480
Query: 363 IHCYLIR--IYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG 422
+H +LIR + E+CNTHLETSL+NMY+RCGSI+SAR F+ +++KDVV WTSMIEGYG
Sbjct: 481 VHGFLIRNIFHRSEVCNTHLETSLLNMYIRCGSISSARVYFNKMLIKDVVTWTSMIEGYG 540
Query: 423 SHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDL 482
SHG G+ AL ++ M+ E +APN VTFLSLLSACSHSGLV EGCE+F SM+ +F I PDL
Sbjct: 541 SHGLGVEALRIFDLMIEERIAPNRVTFLSLLSACSHSGLVIEGCEVFSSMKWKFGIDPDL 600
Query: 483 EHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYG-DNKIAIYAAHRLL 542
+HYTC VDLL R +++EA II+++ L D RIWGAL A RV+ ++ YAA +LL
Sbjct: 601 DHYTCMVDLLGRYGKLKEALVIIMKLIALPDSRIWGALFSASRVHHIHRELGEYAAQKLL 660
Query: 543 ELEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGD 602
ELE DN+GYYTLLSN QAS+GQW+EVE++R V+ EK+ KKPGWS +E G ++GFVSGD
Sbjct: 661 ELELDNIGYYTLLSNAQASIGQWNEVEEIRRVMKEKEMKKKPGWSCIENKGRVYGFVSGD 720
Query: 603 RSHCKTDQIYDLL 611
RSH +T++IY +L
Sbjct: 721 RSHHQTEEIYGVL 730
BLAST of CmoCh03G001870 vs. NCBI nr
Match:
gi|764608911|ref|XP_004305697.2| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580, partial [Fragaria vesca subsp. vesca])
HSP 1 Score: 695.7 bits (1794), Expect = 7.5e-197
Identity = 348/612 (56.86%), Postives = 454/612 (74.18%), Query Frame = 1
Query: 1 MLWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 60
M WN +IK+ + G SA++LY+ MRE+GV HDGFTFPI+N V+ I V YAG++H
Sbjct: 112 MQWNLLIKTHIEWGRLDSALLLYRKMRELGVPHDGFTFPIVNKAVLMIGDGVRYAGVLHS 171
Query: 61 VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 120
+ I+MGFG DLYF NTM+E+Y KC C +ARK+FDEM +RDL++WTSMIS YV+ G++
Sbjct: 172 LAIQMGFGLDLYFGNTMIELYVKCGCFSYARKLFDEMCDRDLITWTSMISGYVSQGNVTS 231
Query: 121 ALNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180
+LF MR EPNSVTM+AMLQ C E + GR + V+KNGLL ++N LRM
Sbjct: 232 GFSLFNEMRMELEPNSVTMLAMLQGGCCFETSIYGRQLHAYVIKNGLLSHGAVENSILRM 291
Query: 181 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 240
Y++LG +E FF E+D ++VV+W+I IS+Y+S GD+VK D+FK+ M GEV IETL
Sbjct: 292 YAKLGTGEEVEDFFRELDRRDVVTWNICISYYTSRGDVVKVRDLFKE-MQGEVAPSIETL 351
Query: 241 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 300
TI+ISA L GE+LH LAIK+GL D +L+TSLLD YAK +L+++ +LF EI
Sbjct: 352 TIVISALAIHG--ILSQGESLHGLAIKSGLRDDVLQTSLLDFYAKCAKLESADKLFREIR 411
Query: 301 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360
+R+ IT GAMM IQNG+ EAV +F Q+QAAGL P IL++LIDA+A+LGAL+LG+
Sbjct: 412 DRNCITCGAMMFGLIQNGYIYEAVGVFRQIQAAGLDPGAEILRNLIDAFANLGALKLGQA 471
Query: 361 IHCYLIR--IYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYG 420
+H +IR YG E C+THLETS++NMY+RCGSI++AR CF+ +++KDVVAWTSMIEGYG
Sbjct: 472 VHGCIIRKSFYGTEECHTHLETSVINMYIRCGSISTARVCFNGMVLKDVVAWTSMIEGYG 531
Query: 421 SHGQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDL 480
SHG G AL L+ M + + PNSVTFLSLLSACSHSGLV+EGC FYSM+ R+ I+PDL
Sbjct: 532 SHGLGFEALKLFDLMTRQGIKPNSVTFLSLLSACSHSGLVTEGCSAFYSMKWRYGIEPDL 591
Query: 481 EHYTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLE 540
+HYTC VDLL+R +++EA A+IL+M D RI+GAL+ R+YG+ ++ YAA RLLE
Sbjct: 592 DHYTCLVDLLARCGKLKEALAVILKMLAFPDSRIFGALLSGSRIYGNIELGQYAAQRLLE 651
Query: 541 LEPDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDR 600
LEPDNVGY+TLLSNTQASV QW EVE++R + E D KKPGWS +E G +HGFVSGD
Sbjct: 652 LEPDNVGYFTLLSNTQASVRQWDEVEEIRRTMKENDLKKKPGWSCIEAKGLIHGFVSGDN 711
Query: 601 SHCKTDQIYDLL 611
SH ++IY++L
Sbjct: 712 SHHHIEEIYEVL 720
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP350_ARATH | 1.1e-107 | 35.01 | Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidop... | [more] |
| PP210_ARATH | 8.9e-97 | 32.74 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN... | [more] |
| PP205_ARATH | 2.9e-95 | 34.15 | Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis th... | [more] |
| PP111_ARATH | 5.4e-94 | 31.64 | Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS... | [more] |
| PP341_ARATH | 2.0e-93 | 33.93 | Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| M5VVK0_PRUPE | 6.9e-197 | 57.26 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002924mg PE=4 SV=1 | [more] |
| A0A0L9TUF7_PHAAN | 2.2e-179 | 53.59 | Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g028600 PE=4 SV=1 | [more] |
| A0A0S3SU84_PHAAN | 2.2e-179 | 53.59 | Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G334900 PE=... | [more] |
| B9T607_RICCO | 1.4e-178 | 54.29 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
| A0A061FB60_THECC | 8.7e-176 | 51.80 | Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G35130.1 | 6.3e-109 | 35.01 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G03580.1 | 5.0e-98 | 32.74 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G01580.1 | 1.6e-96 | 34.15 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G69350.1 | 3.0e-95 | 31.64 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G30700.1 | 1.2e-94 | 33.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
