Carg27190 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27190
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Serine-rich protein-like protein
Location	Cucurbita_argyrosperma_scaffold_486 : 42274 .. 44077 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTAATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCGACTCGTATCAGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTGTGATGGAGATTTTGGTACGTTGGCGAATATCCTCTGGTTTATTAATCTGTTTTCCTCTTCTGAGTTCCCGTCAACGAAGACGGGAGATTCCGACCACTGGTTCGACGGCAGTTACCGATCGTAGCGAAAGGATACGGAATCGGAGGCGAAGCATGGGAATCATATCTGGTTGCCTCTCCAGTAAACCTTTCTGCCGGGAGTTGGACTAGAGAACCTATATAACTTTGTGTATATGCAGCATATATAAATATATGGAAGACATATATAGTTGCCGCGACATTGATAACAATTCGTGGAGCTTCTGGACACTAATTTTTCACCAATTTCAAAATTTAACAGTCAATTCATTCCTAAATGCTCTGGTCTCGAACTAATTTCAAATGGAACGATAAAATTAATTTCGTCTGCCAATCGGTGAAATCAGTTCATTCAGTTAATGTTCCACGAACTCGCTTCGTACTGTTTCCAGAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGGTAAAGTAATTTTATCTTTAATCTTCCTATTCCTCTGTTTCTTCGAGTTTTCAGTTCGTTATAATGTCTGTTTATGTTCTGTATACAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAAGTATGAATTTGTGATCAGAAAGTAGGATTAATGATTGAGAAATTAGGCGGAGATGGTTCAAGTTTGGACGAAGTTGTGAACACAAAACTGAACAAATTCAATTCAAATTAACTGGAATCTATACACCACATAAAATAAATGTTAAAAGAAACAAGTTGAAGGAAAGAATTGGACGGAAGAAAACTGAAACATACGAAATCATGATGATATGGTGCGGTAGACGGTGGAGGTGGATGGTAAACCTGGTGATGTTCCAAATCGGTGGAGAGACCGACTTGTACCTCCACACGAAAAACCAATCCGAAGAACAAACCCTATCAAATGTTCATCAATTATTGAAATTCTACCCATTTTTGTATTATGAACTTGATGATACTCAACGAGAGCGTTACCTCCCCCCATATCCAAGATTAGGATGGTGAGACATGCAGCACAAATTGATATACATCACTAAGTTCA

mRNA sequence

ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTAATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCGACTCGTATCAGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTACGGGAGATTCCGACCACTGGTTCGACGGCAGTTACCGATCGTAGCGAAAGGATACGGAATCGGAGGCGAAGCATGGGAATCATATCTGGTTGCCTCTCCAAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAAGTATGAATTTGTGATCAGAAAGTAGGATTAATGATTGAGAAATTAGGCGGAGATGGTTCAAGTTTGGACGAAGTTGTGAACACAAAACTGAACAAATTCAATTCAAATTAACTGGAATCTATACACCACATAAAATAAATGTTAAAAGAAACAAGTTGAAGGAAAGAATTGGACGGAAGAAAACTGAAACATACGAAATCATGATGATATGGTGCGGTAGACGGTGGAGGTGGATGGTAAACCTGGTGATGTTCCAAATCGGTGGAGAGACCGACTTGTACCTCCACACGAAAAACCAATCCGAAGAACAAACCCTATCAAATGTTCATCAATTATTGAAATTCTACCCATTTTTGTATTATGAACTTGATGATACTCAACGAGAGCGTTACCTCCCCCCATATCCAAGATTAGGATGGTGAGACATGCAGCACAAATTGATATACATCACTAAGTTCA

Coding sequence (CDS)

ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTAATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCGACTCGTATCAGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTACGGGAGATTCCGACCACTGGTTCGACGGCAGTTACCGATCGTAGCGAAAGGATACGGAATCGGAGGCGAAGCATGGGAATCATATCTGGTTGCCTCTCCAAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAAGTATGA

Protein sequence

MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSRINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQRRRADFCPRPSRLSNMSKADDLREIPTTGSTAVTDRSERIRNRRRSMGIISGCLSKRLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFEV

Homology

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BLAST of Carg27190 vs. NCBI nr
Match: XP_022933728.1 (uncharacterized protein LOC111441057 [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 6.6e-78
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of Carg27190 vs. NCBI nr
Match: XP_023530348.1 (uncharacterized protein LOC111792947 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 6.6e-78
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of Carg27190 vs. NCBI nr
Match: XP_022966156.1 (uncharacterized protein LOC111465917 [Cucurbita maxima])

HSP 1 Score: 297.0 bits (759), Expect = 7.3e-77
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPR SRLSNMSKADDL
Sbjct: 181 RRADFCPRRSRLSNMSKADDL 201

[Close]

BLAST of Carg27190 vs. NCBI nr
Match: XP_022960906.1 (uncharacterized protein LOC111461568 [Cucurbita moschata])

HSP 1 Score: 261.5 bits (667), Expect = 3.4e-66
Identity = 165/206 (80.10%), Postives = 170/206 (82.52%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYS-----SSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPV+RSLSPSGRF  SYS       XXXXXXXXXXXXXXXX          
Sbjct: 1   MAVSSRKSSGPVMRSLSPSGRFCRSYSXXXXXXXXXXXXXXXXXXXXXXXNPTSFFRRSL 60

Query: 61  XXXXXXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPT 120
                      SS SASSVRF+LDRSISPNR ISV TR  GNQVVKRQSNQKRTC+CSPT
Sbjct: 61  SPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSPT 120

Query: 121 THPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPS 180
           THPGSFRCSLHKGVPSQP+TPYSSNRLNARRSAMTNSLVRIGGVEGDLV+RALASLIRPS
Sbjct: 121 THPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSLVRIGGVEGDLVRRALASLIRPS 180

Query: 181 SHSQRRRADFCPRPSRLSNMSKADDL 202
           SHSQRRRADFCPRPSRLS MSKADDL
Sbjct: 181 SHSQRRRADFCPRPSRLSIMSKADDL 206

[Close]

BLAST of Carg27190 vs. NCBI nr
Match: XP_023516526.1 (putative protein TPRXL [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 4.4e-66
Identity = 164/207 (79.23%), Postives = 170/207 (82.13%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSY------SSSXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSR+SSGPV+RSLSPSGRF GSY         XXXXXXXXXXXXXXXX         
Sbjct: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYXXXXXXXXXXXXXXXXXXXXXXXXXNPTSFFRRS 60

Query: 61  XXXXXXXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSP 120
                       SS SASSVRF+LDRSISPNR ISV TR  GNQVVKRQSNQKRTC+CSP
Sbjct: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRP 180
           TTHPGSFRCSLHKGVPSQP+TPYSSNRLNARRSAMTNSLVRIGGVEGDLV+RALASLIRP
Sbjct: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSLVRIGGVEGDLVRRALASLIRP 180

Query: 181 SSHSQRRRADFCPRPSRLSNMSKADDL 202
           SSHSQRRRADFCPRPSRLS MSKADDL
Sbjct: 181 SSHSQRRRADFCPRPSRLSIMSKADDL 207

[Close]

BLAST of Carg27190 vs. TAIR10
Match: AT5G11090.1 (serine-rich protein-related)

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36
Identity = 131/215 (60.93%), Postives = 148/215 (68.84%), Query Frame = 0


Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSS-------------XXXXXXXXXXXXXXXXXXXXX 63
           S  KS+GPVLRS SPSGRF G YS +             XXXXXXXXXXXXXXXXXXXXX
Sbjct: 6   SRTKSNGPVLRSQSPSGRFCGGYSRAVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 65

Query: 64  XXXXXXXXXXXXXXXXSSPSASSVRFSLD-RSISP-NRPISVSTRISGNQVVKRQSNQKR 123
           XXXXXXX         + P + S R+SLD RSISP N+ ISVS     NQ         R
Sbjct: 66  XXXXXXXSPTRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSK----NQPPSHNHKISR 125

Query: 124 TCMCSPTTHPGSFRCSLHKGVPS---QPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVK 183
            CMCSPTTHPGSFRCSLHK V +   Q +  Y++N LN RRSAMTNSLVRIGGVEG+ V+
Sbjct: 126 RCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVR 185

Query: 184 RALASLIRPSSHSQRRRADFCPRPSRLSNMSKADD 201
           RAL +LIRPSSH  +RRA + PRPSRLS M+KAD+
Sbjct: 186 RALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of Carg27190 vs. TAIR10
Match: AT5G25280.1 (serine-rich protein-related)

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-35
Identity = 83/139 (59.71%), Postives = 104/139 (74.82%), Query Frame = 0


Query: 67  SSPSASSVRFSLD-RSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGSFRCSL 126
           S+P   S R+S+D RSISPNR I+VS+    N    +  + +R CMCSPTTHPGSFRCSL
Sbjct: 84  SAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNH--HKIPDSRRRCMCSPTTHPGSFRCSL 143

Query: 127 HKGVPS---QPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQRRR 186
           HK V +   Q +  Y++N LN RRSAMTNSLVRIGGVEG+ V+RAL +LIRPSSH  +RR
Sbjct: 144 HKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHQLKRR 203

Query: 187 ADFCPRPSRLSNMSKADDL 202
           + + PR SRL++MSKA+DL
Sbjct: 204 SAYEPRRSRLASMSKAEDL 220

[Close]

BLAST of Carg27190 vs. TAIR10
Match: AT5G20370.1 (serine-rich protein-related)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-13
Identity = 47/109 (43.12%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 100 VKRQSNQKRTCMCSPTTHPGSFRCSLHKGVPSQPSTPYSS------NR----------LN 159
           V      KR C+CSPTTHPGSFRCS H+ +  + S   +S      NR          LN
Sbjct: 61  VSSNHQTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLN 120

Query: 160 ARRSAMTNSLVRIGGVEGDLVKRAL-ASLIRPSSHSQRRRADFCPRPSR 192
            R+ A+ NSL +IG VE +  +R+L A+L +PSS    RR +F PR SR
Sbjct: 121 LRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of Carg27190 vs. TAIR10
Match: AT1G67910.1 (unknown protein)

HSP 1 Score: 46.2 bits (108), Expect = 4.1e-05
Identity = 19/38 (50.00%), Postives = 29/38 (76.32%), Query Frame = 0


Query: 96  GNQVVKRQSNQKRT-CMCSPTTHPGSFRCSLHKGVPSQ 133
           G++ + RQ++  +T C+CSPTTHPGSFRC +H+ +  Q
Sbjct: 29  GSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQ 66

[Close]

BLAST of Carg27190 vs. TAIR10
Match: AT1G24577.1 (unknown protein)

HSP 1 Score: 42.0 bits (97), Expect = 7.6e-04
Identity = 19/44 (43.18%), Postives = 27/44 (61.36%), Query Frame = 0


Query: 101 KRQSNQKRTCMCSPTTHPGSFRCSLHKGVPSQPSTPYSSNRLNA 145
           ++ S  K  C+CSPTTHPGSF+C LH+    Q +    +N L +
Sbjct: 23  RQTSITKTICICSPTTHPGSFKCKLHRTPSLQRNKSVETNILQS 66

[Close]

BLAST of Carg27190 vs. TrEMBL
Match: tr|A0A1S4DUZ2|A0A1S4DUZ2_CUCME (uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC103487397 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.5e-59
Identity = 168/203 (82.76%), Postives = 175/203 (86.21%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120
                 X            DRSISPNRPISV +R +GN QVVK+QS+QKRTCMCSPTTHP
Sbjct: 61  RVNLQGXXXXXXXXXXXXXDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180
           GSFRCSLHKGV S PSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSNMSKADDL 202
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of Carg27190 vs. TrEMBL
Match: tr|A0A0A0LW36|A0A0A0LW36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.8e-55
Identity = 169/203 (83.25%), Postives = 174/203 (85.71%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120
           XXXXXXX                   RPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSNMSKADDL 202
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of Carg27190 vs. TrEMBL
Match: tr|A0A2I4EMR7|A0A2I4EMR7_9ROSI (uncharacterized protein LOC108991002 OS=Juglans regia OX=51240 GN=LOC108991002 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.7e-54
Identity = 153/202 (75.74%), Postives = 163/202 (80.69%), Query Frame = 0


Query: 2   AVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 61
           A S R SSGPV+RSL+PSGRFY S+S S    XXXXXXXXXXXXXXXXXXXXX       
Sbjct: 3   ATSRRSSSGPVVRSLAPSGRFYDSHSPS-RYSXXXXXXXXXXXXXXXXXXXXXRSASPTR 62

Query: 62  XXXXXSSPSASSVRFSLDRSISPNRPISVSTRISG---NQVVKRQSNQKRTCMCSPTTHP 121
                +SPSA SVRFSLDRSISP+R ISVS R +G   NQVVKRQ  QKRTCMCSPTTHP
Sbjct: 63  VNMCGTSPSARSVRFSLDRSISPSRSISVSPRGNGGGSNQVVKRQ-GQKRTCMCSPTTHP 122

Query: 122 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 181
           GSFRCSLHKG  SQ   PYS NRLNARRSAMTNSLVRIGGVEGDLVKRALA+LIRPSSH 
Sbjct: 123 GSFRCSLHKGSGSQSVAPYSPNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ 182

Query: 182 QRRRADFCPRPSRLSNMSKADD 201
           Q+RRADF PRPSRLS MSKA++
Sbjct: 183 QKRRADFLPRPSRLSVMSKAEE 202

[Close]

BLAST of Carg27190 vs. TrEMBL
Match: tr|A0A1S4E2K6|A0A1S4E2K6_CUCME (uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.5e-51
Identity = 127/204 (62.25%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA +SR+SS  VLRSLSPSGRFYG  +SS                               
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSS-----SSAFASSTSTFSSRSATSFFCRSTSP 60

Query: 61  XXXXXXSSPSAS--SVRFSLDRSISPNRPISVSTRISG--NQVVKRQSNQKRTCMCSPTT 120
                  SPS S  SVRFSLDR+ SPNR +SVS+  SG  N+VV+RQS+ KRTCMCSPTT
Sbjct: 61  SRVNLHGSPSVSVPSVRFSLDRATSPNRSVSVSSPRSGGTNRVVQRQSSSKRTCMCSPTT 120

Query: 121 HPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSS 180
           HPGSFRCSLHKG+ SQP   YS +RLNARRSAMTNSLVRIGGVEGDLVKRALA+LIRPSS
Sbjct: 121 HPGSFRCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSS 180

Query: 181 HSQRRRADFCPRPSRLSNMSKADD 201
           H QRRR DF P+ SRLS MSKAD+
Sbjct: 181 HQQRRRVDFRPKRSRLSIMSKADE 199

[Close]

BLAST of Carg27190 vs. TrEMBL
Match: tr|A0A0A0LL69|A0A0A0LL69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.5e-51
Identity = 127/204 (62.25%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA +SR+SS  VLRSLSPSGRFYG  +SS                               
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSS-----SSAFASSTSTFSSRSATSFFCRSTSP 60

Query: 61  XXXXXXSSPSAS--SVRFSLDRSISPNRPISVSTRISG--NQVVKRQSNQKRTCMCSPTT 120
                  SPS S  SVRFSLDR+ SPNR +SVS+  SG  N+VV+RQS+ KRTCMCSPTT
Sbjct: 61  SRVNLHGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMCSPTT 120

Query: 121 HPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSS 180
           HPGSFRCSLHKG+ SQP   YS +RLNARRSAMTNSLVRIGGVEGDLVKRALA+LIRPSS
Sbjct: 121 HPGSFRCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSS 180

Query: 181 HSQRRRADFCPRPSRLSNMSKADD 201
           H QRRR DF P+ SRLS MSKAD+
Sbjct: 181 HQQRRRVDFRPKRSRLSIMSKADE 199

The following BLAST results are available for this feature:

BLAST of Carg27190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933728.1	6.6e-78	100.00	uncharacterized protein LOC111441057 [Cucurbita moschata]	[more]
XP_023530348.1	6.6e-78	100.00	uncharacterized protein LOC111792947 [Cucurbita pepo subsp. pepo]	[more]
XP_022966156.1	7.3e-77	99.50	uncharacterized protein LOC111465917 [Cucurbita maxima]	[more]
XP_022960906.1	3.4e-66	80.10	uncharacterized protein LOC111461568 [Cucurbita moschata]	[more]
XP_023516526.1	4.4e-66	79.23	putative protein TPRXL [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg27190 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11090.1	2.0e-36	60.93	serine-rich protein-related	[more]
AT5G25280.1	1.7e-35	59.71	serine-rich protein-related	[more]
AT5G20370.1	1.4e-13	43.12	serine-rich protein-related	[more]
AT1G67910.1	4.1e-05	50.00	unknown protein	[more]
AT1G24577.1	7.6e-04	43.18	unknown protein	[more]

BLAST of Carg27190 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg27190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DUZ2\|A0A1S4DUZ2_CUCME	4.5e-59	82.76	uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0LW36\|A0A0A0LW36_CUCSA	6.8e-55	83.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1	[more]
tr\|A0A2I4EMR7\|A0A2I4EMR7_9ROSI	5.7e-54	75.74	uncharacterized protein LOC108991002 OS=Juglans regia OX=51240 GN=LOC108991002 P...	[more]
tr\|A0A1S4E2K6\|A0A1S4E2K6_CUCME	4.5e-51	62.25	uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=...	[more]
tr\|A0A0A0LL69\|A0A0A0LL69_CUCSA	4.5e-51	62.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27190-RA	Carg27190-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..78
None	No IPR available	PANTHER	PTHR33132:SF12	SUBFAMILY NOT NAMED	coord: 7..200
None	No IPR available	PANTHER	PTHR33132	FAMILY NOT NAMED	coord: 7..200

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27190	Cla018683	Watermelon (97103) v1	carwmB0572
Carg27190	Csa1G264020	Cucumber (Chinese Long) v2	carcuB0602
Carg27190	MELO3C010275	Melon (DHL92) v3.5.1	carmeB0578
Carg27190	ClCG06G011900	Watermelon (Charleston Gray)	carwcgB0560
Carg27190	CSPI01G17130	Wild cucumber (PI 183967)	carcpiB0608
Carg27190	Cucsa.350570	Cucumber (Gy14) v1	carcgyB0649
Carg27190	CmaCh11G005040	Cucurbita maxima (Rimu)	carcmaB0804
Carg27190	CmaCh10G005040	Cucurbita maxima (Rimu)	carcmaB0803
Carg27190	CmoCh10G005380	Cucurbita moschata (Rifu)	carcmoB0780
Carg27190	CmoCh11G004990	Cucurbita moschata (Rifu)	carcmoB0781
Carg27190	Lsi06G010670	Bottle gourd (USVL1VR-Ls)	carlsiB521
Carg27190	Cp4.1LG04g09150	Cucurbita pepo (Zucchini)	carcpeB0819
Carg27190	CsGy1G017350	Cucumber (Gy14) v2	carcgybB0576
Carg27190	MELO3C010275.2	Melon (DHL92) v3.6.1	carmedB0585
Carg27190	CsaV3_1G028370	Cucumber (Chinese Long) v3	carcucB0609
Carg27190	Bhi02G000730	Wax gourd	carwgoB0686

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg27190	Carg09958	Silver-seed gourd	carcarB153

The following block(s) are covering this gene:


Gene	Organism	Block
Carg27190	Cucurbita pepo (Zucchini)	carcpeB0818
Carg27190	Watermelon (97103) v2	carwmbB0600