Cla018683 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla018683
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Serine-rich protein (AHRD V1 ***- Q8L8M8_ARATH)
Location	Chr6 : 20933292 .. 20933903 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTTCTAGAAAATCAAGCGGCCCGGTTCTGAGGTCTCTTTCACCTTCCGGGAGGTTCTATGGCTCCTATTCTTCTTCTTCATCTTCTTCCTCGTCGGCCTTTGCTTCATCCACATCAAGCTTTTCCACCAGAAACCCTACTTCGTTTTTCCGTAGATCTGTATCTCCTTCTCGTGTTAATCTGCAAGGATCTTCTTCTCCGTCAGCATCGTCTGTGAGATTTTCACTGGACCGGTCTATTTCTCCGAATCGGCCTATCTCTGTTTTGTCTCGTACCAGTGGGAATCATCAAGTAGTGAAGAGACAGAGCAACCAGAAGAGGACCTGCATGTGTTCCCCAACCACGCACCCTGGTTCGTTCCGGTGCAGTCTCCACAAAGGCGTTCAGTCGCAACCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCTCGGAGATCGGCGATGACGAACTCTCTGGTTAGGATCGGAGGAGTTGAAGGCGATATATTGAGGCGAGCTTTGGCGTCTCTCATCCGACCTTCCTCTCATAGTCAAAGACGACGAGCGGATTTCTGTCCAAGACCGAGCCGGCTTTCAATCATGTCGAAAGCCGATGATCTGTGA

mRNA sequence

ATGGCGGTTTCTTCTAGAAAATCAAGCGGCCCGGTTCTGAGGTCTCTTTCACCTTCCGGGAGGTTCTATGGCTCCTATTCTTCTTCTTCATCTTCTTCCTCGTCGGCCTTTGCTTCATCCACATCAAGCTTTTCCACCAGAAACCCTACTTCGTTTTTCCGTAGATCTGTATCTCCTTCTCGTGTTAATCTGCAAGGATCTTCTTCTCCGTCAGCATCGTCTGTGAGATTTTCACTGGACCGGTCTATTTCTCCGAATCGGCCTATCTCTGTTTTGTCTCGTACCAGTGGGAATCATCAAGTAGTGAAGAGACAGAGCAACCAGAAGAGGACCTGCATGTGTTCCCCAACCACGCACCCTGGTTCGTTCCGGTGCAGTCTCCACAAAGGCGTTCAGTCGCAACCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCTCGGAGATCGGCGATGACGAACTCTCTGGTTAGGATCGGAGGAGTTGAAGGCGATATATTGAGGCGAGCTTTGGCGTCTCTCATCCGACCTTCCTCTCATAGTCAAAGACGACGAGCGGATTTCTGTCCAAGACCGAGCCGGCTTTCAATCATGTCGAAAGCCGATGATCTGTGA

Coding sequence (CDS)

ATGGCGGTTTCTTCTAGAAAATCAAGCGGCCCGGTTCTGAGGTCTCTTTCACCTTCCGGGAGGTTCTATGGCTCCTATTCTTCTTCTTCATCTTCTTCCTCGTCGGCCTTTGCTTCATCCACATCAAGCTTTTCCACCAGAAACCCTACTTCGTTTTTCCGTAGATCTGTATCTCCTTCTCGTGTTAATCTGCAAGGATCTTCTTCTCCGTCAGCATCGTCTGTGAGATTTTCACTGGACCGGTCTATTTCTCCGAATCGGCCTATCTCTGTTTTGTCTCGTACCAGTGGGAATCATCAAGTAGTGAAGAGACAGAGCAACCAGAAGAGGACCTGCATGTGTTCCCCAACCACGCACCCTGGTTCGTTCCGGTGCAGTCTCCACAAAGGCGTTCAGTCGCAACCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCTCGGAGATCGGCGATGACGAACTCTCTGGTTAGGATCGGAGGAGTTGAAGGCGATATATTGAGGCGAGCTTTGGCGTCTCTCATCCGACCTTCCTCTCATAGTCAAAGACGACGAGCGGATTTCTGTCCAAGACCGAGCCGGCTTTCAATCATGTCGAAAGCCGATGATCTGTGA

Protein sequence

MAVSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPSRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHSQRRRADFCPRPSRLSIMSKADDL

Homology

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BLAST of Cla018683 vs. Swiss-Prot
Match: YH5D_SCHPO (Uncharacterized serine-rich protein C215.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC215.13 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-08
Identity = 58/192 (30.21%), Postives = 80/192 (41.67%), Query Frame = 1


Query: 4   SSRKSSGPVLRSLSPSGRFYGSYS--------SSSSSSSSAFASSTSSFSTRNPTSFFRR 63
           SS  SS P   S + S     S S        SSSSSSSS+F+S+ SS S  + +SF   
Sbjct: 276 SSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSS 335

Query: 64  SVSPSRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCS 123
             S S      SSSPS+SS   +   S S +   S +S +S         S+   +   S
Sbjct: 336 PTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPAS 395

Query: 124 PTTHPGSFRCSLHKGVQSQPSTPYSS----NRLNARRSAMTNSLVRIGGVEGDILRRALA 183
            ++H  S             S P SS    N  ++R S+ ++S          IL  + +
Sbjct: 396 SSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSKPILTASSS 455

HSP 2 Score: 45.8 bits (107), Expect = 6.4e-04
Identity = 46/151 (30.46%), Postives = 67/151 (44.37%), Query Frame = 1


Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPSRVN 63
           SS  SS P+      S  F    SS+SSS  S  ++S+S+FS+  PTS     +S S V 
Sbjct: 162 SSLSSSDPLT-----SSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSV- 221

Query: 64  LQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPGSF 123
           +  SSSPS+SS       S+S +   S  S +S     +   S+       S T    S 
Sbjct: 222 VSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSS-------SSTASSSSS 281

Query: 124 RCSLHKGVQSQPSTPYSSNRLNARRSAMTNS 155
             S+     S  S+P S++   +  S+ ++S
Sbjct: 282 SSSIISSSSSSSSSPTSTSSTISSSSSSSSS 299

HSP 3 Score: 32.7 bits (73), Expect = 5.6e+00
Identity = 46/157 (29.30%), Postives = 61/157 (38.85%), Query Frame = 1


Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPSRVN 63
           S   SS     S S S   + S  SSSSS+SS+  +S+SS S+R  +S    S S S  +
Sbjct: 349 SPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASS---SSHSSSLSS 408

Query: 64  LQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPGSF 123
            + SSS  +SS   S   +   N   S  S  S +H +    S    T   S      S 
Sbjct: 409 HKSSSSSKSSSAPVS--SAFYHNSTSSRSSSHSSSHSLSSLSSKPILTASSSSLLTSSSH 468

Query: 124 RCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGG 161
                        T  S +   A +S  T+ L+ I G
Sbjct: 469 TYERSTVYVVTVETVSSGSSTYASQSTQTSILLVIVG 500

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BLAST of Cla018683 vs. Swiss-Prot
Match: TPRXL_HUMAN (Putative protein TPRXL OS=Homo sapiens GN=TPRXL PE=5 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-06
Identity = 54/151 (35.76%), Postives = 71/151 (47.02%), Query Frame = 1


Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPSRVN 63
           SS  SS P   S S S     S SS+SS SSS+ +SS+SS S+ N +S    S SPS  +
Sbjct: 67  SSHSSSSP---SSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSS-SSSSSSPSSSS 126

Query: 64  LQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPGSF 123
              SSSPS+SS   S   S S + P S  S  S +       S+   +   S  +  GS 
Sbjct: 127 SSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSS---SSSSSSSSSPSSSSPSSSGSS 186

Query: 124 RCSLHKGVQSQPSTPYSSNRLNARRSAMTNS 155
             S +    S  S+P SS+   + RS+  +S
Sbjct: 187 PSSSNSSPSSSSSSPSSSSSSPSPRSSSPSS 210

HSP 2 Score: 50.8 bits (120), Expect = 2.0e-05
Identity = 51/154 (33.12%), Postives = 71/154 (46.10%), Query Frame = 1


Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPSRVN 63
           SS  S+     S S S     S S+SSSSSSS+  SS+SS S+ +P+S    S SPS  +
Sbjct: 84  SSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSS---SSSSPSSSS 143

Query: 64  LQGSSSPSASS---VRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHP 123
              SSSPS+SS      S   S S + P S    +SG+       S    +   S ++  
Sbjct: 144 SSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSS 203

Query: 124 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNS 155
            S R S      S  S+P +S+  ++  S+ + S
Sbjct: 204 PSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSPS 234

HSP 3 Score: 50.1 bits (118), Expect = 3.4e-05
Identity = 53/165 (32.12%), Postives = 73/165 (44.24%), Query Frame = 1


Query: 3   VSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNP--TSFFRRSVSPS 62
           +SS   S  +  S S S     S+SSSS SSS + +S +SS ST +P  +S    S SPS
Sbjct: 46  LSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPS 105

Query: 63  RVN---LQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPT 122
             N      SSSPS+SS   S   S S + P S  S +S +        +   +   S +
Sbjct: 106 SSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSS 165

Query: 123 THP--------GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNS 155
           + P        GS   S +    S  S+P SS+   + RS+  +S
Sbjct: 166 SSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSS 210

HSP 4 Score: 48.9 bits (115), Expect = 7.6e-05
Identity = 48/151 (31.79%), Postives = 62/151 (41.06%), Query Frame = 1


Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPSRVN 63
           SS  SS     S S S     S SSSS SSSS+  SS+SS S+ +P+S      S S  +
Sbjct: 102 SSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSS 161

Query: 64  LQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPGSF 123
              SSSPS+SS   S     S N   S  S +  +        +   +   S T+ P + 
Sbjct: 162 SSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTS 221

Query: 124 RCSLHKGVQSQPSTPYSSNRLNARRSAMTNS 155
             S      S PS+   S  L  R  +  +S
Sbjct: 222 SPSSSSPSSSSPSSSCPSAALGRRPQSPQSS 252

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BLAST of Cla018683 vs. TrEMBL
Match: A0A0A0LW36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264020 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.3e-101
Identity = 195/203 (96.06%), Postives = 196/203 (96.55%), Query Frame = 1


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS SSSSSSAFASSTSSFSTRN TSFF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSR SGNHQVVK+QS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSIMSKADDL 204
           QRRR DFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of Cla018683 vs. TrEMBL
Match: A0A0A0LL69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009440 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-72
Identity = 149/203 (73.40%), Postives = 170/203 (83.74%), Query Frame = 1


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPS 60
           MA +SR+SS  VLRSLSPSGRFYG      +SSSSAFASSTS+FS+R+ TSFF RS SPS
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGH----RTSSSSAFASSTSTFSSRSATSFFCRSTSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLS-RTSGNHQVVKRQSNQKRTCMCSPTTH 120
           RVNL GS S S  SVRFSLDR+ SPNR +SV S R+ G ++VV+RQS+ KRTCMCSPTTH
Sbjct: 61  RVNLHGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMCSPTTH 120

Query: 121 PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSH 180
           PGSFRCSLHKG+ SQP   YS +RLNARRSAMTNSLVRIGGVEGD+++RALA+LIRPSSH
Sbjct: 121 PGSFRCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSH 180

Query: 181 SQRRRADFCPRPSRLSIMSKADD 203
            QRRR DF P+ SRLSIMSKAD+
Sbjct: 181 QQRRRVDFRPKRSRLSIMSKADE 199

[Close]

BLAST of Cla018683 vs. TrEMBL
Match: I3SMU6_MEDTR (Plant/F18G18-20 protein OS=Medicago truncatula GN=MTR_4g116277 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.0e-65
Identity = 149/209 (71.29%), Postives = 169/209 (80.86%), Query Frame = 1


Query: 1   MAVSSRKS-SGPVLRSLSPSGRFYGSYSSSS---SSSSSAFASSTSSFSTRNPTSFFRRS 60
           MA +SRKS +  VLRSLSPS RF  S  S S   SSSS+AFASSTSSF++R+ TSFFR S
Sbjct: 1   MAAASRKSRTNTVLRSLSPSPRFCNSQDSPSHYSSSSSTAFASSTSSFTSRS-TSFFRAS 60

Query: 61  VSPSRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQ--KRTCMC 120
            SP+RV+L GSS PSASSVRFSLDRSISPNR IS + RT      VK+QS+   KRTCMC
Sbjct: 61  TSPTRVSLYGSS-PSASSVRFSLDRSISPNRSISAVPRTG-----VKKQSSSQPKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKGVQSQPS-TPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASL 180
           SPTTHPGSFRCSLHKG  S+ + TPYS NRLNARRSAMTNSLVRI GVEGD+++RALA+L
Sbjct: 121 SPTTHPGSFRCSLHKGFGSRAAVTPYSQNRLNARRSAMTNSLVRIRGVEGDLVKRALAAL 180

Query: 181 IRPSSHSQRRRADFCPRPSRLSIMSKADD 203
           IRPSSH Q+RR DF PRPSRLS+M+KA D
Sbjct: 181 IRPSSHQQKRRGDFHPRPSRLSVMTKAQD 202

[Close]

BLAST of Cla018683 vs. TrEMBL
Match: M5VR32_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011611mg PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.7e-65
Identity = 146/207 (70.53%), Postives = 167/207 (80.68%), Query Frame = 1


Query: 2   AVSSRKSS-GPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPS 61
           A SSR+SS GPV+RS SP+GRF+    ++  SSSSAFASSTSSFS+R+ +SFF+R+ SP+
Sbjct: 3   AASSRRSSCGPVIRSASPAGRFH----NTQYSSSSAFASSTSSFSSRS-SSFFQRAASPT 62

Query: 62  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQ--VVKRQ-SNQKRTCMCSPT 121
           R+NL  SSSPSA SVRFSLDR ISP+R ISV    + NH   V  RQ SNQKRTCMCSPT
Sbjct: 63  RLNL-ASSSPSAQSVRFSLDRPISPSRSISVTPHGNSNHHNAVKSRQISNQKRTCMCSPT 122

Query: 122 THPGSFRCSLHKGVQSQ--PSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIR 181
            HPGSFRCSLHK   S    S PYS NRLNARRSAMTNSLVRIGGVEGD++RRAL++LIR
Sbjct: 123 NHPGSFRCSLHKNFSSHVTASAPYSQNRLNARRSAMTNSLVRIGGVEGDLVRRALSALIR 182

Query: 182 PSSHSQRRRADFCPRPSRLSIMSKADD 203
           PSSHSQRRRADF PRPSRLS MSK+ +
Sbjct: 183 PSSHSQRRRADFRPRPSRLSTMSKSHE 203

[Close]

BLAST of Cla018683 vs. TrEMBL
Match: I3SY62_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.5e-65
Identity = 148/208 (71.15%), Postives = 168/208 (80.77%), Query Frame = 1


Query: 1   MAVSSRKS-SGPVLRSLSPSGRFYGSYSSSS--SSSSSAFASSTSSFSTRNPTSFFRRSV 60
           MA +SRKS +  VLRSLSPS RF  S  S S  SSSS+AFASSTSSF++R+ TSFFR S 
Sbjct: 1   MAAASRKSRTNTVLRSLSPSPRFCNSQDSPSHYSSSSTAFASSTSSFTSRS-TSFFRAST 60

Query: 61  SPSRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQ--KRTCMCS 120
           SP+RV+L GSS PSASSVRFSLDRSISPNR IS + RT      VK+QS+   KRTCMCS
Sbjct: 61  SPTRVSLYGSS-PSASSVRFSLDRSISPNRSISAVPRTG-----VKKQSSSQPKRTCMCS 120

Query: 121 PTTHPGSFRCSLHKGVQSQPS-TPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLI 180
           PTTHPGSFRCSLHKG  S+ + TPYS NR NARRSAMTNSLVRI GVEGD+++RALA+LI
Sbjct: 121 PTTHPGSFRCSLHKGFGSRAAVTPYSQNRFNARRSAMTNSLVRIRGVEGDLVKRALAALI 180

Query: 181 RPSSHSQRRRADFCPRPSRLSIMSKADD 203
           RPSSH Q+RR DF PRPSRLS+M+KA D
Sbjct: 181 RPSSHQQKRRGDFHPRPSRLSVMTKAQD 201

[Close]

BLAST of Cla018683 vs. NCBI nr
Match: gi|449457949|ref|XP_004146710.1| (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis sativus])

HSP 1 Score: 376.3 bits (965), Expect = 3.3e-101
Identity = 195/203 (96.06%), Postives = 196/203 (96.55%), Query Frame = 1


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS SSSSSSAFASSTSSFSTRN TSFF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSR SGNHQVVK+QS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSIMSKADDL 204
           QRRR DFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of Cla018683 vs. NCBI nr
Match: gi|659086409|ref|XP_008443919.1| (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo])

HSP 1 Score: 371.7 bits (953), Expect = 8.2e-100
Identity = 192/203 (94.58%), Postives = 196/203 (96.55%), Query Frame = 1


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS SSSSSSAFASSTSSFST + TSFFRRSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTTDHTSFFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSR +GNHQVVK+QS+QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQS PSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSIMSKADDL 204
           QRRR DFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of Cla018683 vs. NCBI nr
Match: gi|1009110112|ref|XP_015893789.1| (PREDICTED: uncharacterized protein LOC107427897 [Ziziphus jujuba])

HSP 1 Score: 283.1 bits (723), Expect = 3.8e-73
Identity = 157/207 (75.85%), Postives = 172/207 (83.09%), Query Frame = 1


Query: 1   MAVSSRKSS--GPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVS 60
           MA SSR+SS  GP  RSLSPSGRFY S SSS SSS+SAFASSTSSFS+R+ T F  RS S
Sbjct: 1   MAASSRRSSASGPGPRSLSPSGRFYSSRSSSHSSSASAFASSTSSFSSRSAT-FLHRSAS 60

Query: 61  PSRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGN--HQVVKRQSNQKRTCMCSP 120
           P RVN+ G S P ASS+RFS+DR ISPNR ISV  R +GN  +QVVKRQ NQKRTCMCSP
Sbjct: 61  PPRVNMYGPSPP-ASSIRFSMDRPISPNRSISVTPRGNGNGNNQVVKRQINQKRTCMCSP 120

Query: 121 TTHPGSFRCSLHKGV-QSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIR 180
           TTHPGSFRCSLHKG   S  S PYS NRLNARRSAMTNSLVRIGGVEGD+++RAL++LIR
Sbjct: 121 TTHPGSFRCSLHKGFGSSHSSVPYSPNRLNARRSAMTNSLVRIGGVEGDLVKRALSALIR 180

Query: 181 PSSHSQRRRADFCPRPSRLSIMSKADD 203
           PSSHSQRRRADF PRPSRLSIM KA+D
Sbjct: 181 PSSHSQRRRADFQPRPSRLSIMCKAED 205

[Close]

BLAST of Cla018683 vs. NCBI nr
Match: gi|700205637|gb|KGN60756.1| (hypothetical protein Csa_2G009440 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 1.9e-72
Identity = 149/203 (73.40%), Postives = 170/203 (83.74%), Query Frame = 1


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVSPS 60
           MA +SR+SS  VLRSLSPSGRFYG      +SSSSAFASSTS+FS+R+ TSFF RS SPS
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGH----RTSSSSAFASSTSTFSSRSATSFFCRSTSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLS-RTSGNHQVVKRQSNQKRTCMCSPTTH 120
           RVNL GS S S  SVRFSLDR+ SPNR +SV S R+ G ++VV+RQS+ KRTCMCSPTTH
Sbjct: 61  RVNLHGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMCSPTTH 120

Query: 121 PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSH 180
           PGSFRCSLHKG+ SQP   YS +RLNARRSAMTNSLVRIGGVEGD+++RALA+LIRPSSH
Sbjct: 121 PGSFRCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSH 180

Query: 181 SQRRRADFCPRPSRLSIMSKADD 203
            QRRR DF P+ SRLSIMSKAD+
Sbjct: 181 QQRRRVDFRPKRSRLSIMSKADE 199

[Close]

BLAST of Cla018683 vs. NCBI nr
Match: gi|1021473470|ref|XP_016199696.1| (PREDICTED: uncharacterized protein LOC107640704 [Arachis ipaensis])

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 150/207 (72.46%), Postives = 168/207 (81.16%), Query Frame = 1


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYG--SYSSSSSSSSSAFASSTSSFSTRNPTSFFRRSVS 60
           MAV+SRKS  PVLRSLSPS RF    S+S SSS SSS FASS+SSF++R+ T+FF R+ S
Sbjct: 1   MAVTSRKSRAPVLRSLSPSPRFCNNNSHSPSSSYSSSGFASSSSSFTSRS-TTFFHRATS 60

Query: 61  PSRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTT 120
           P+RVNL G SS SASSVRFSLDRSISPNR ISV  RT G    VKRQ  QKRTCMCSPTT
Sbjct: 61  PTRVNLCGPSSASASSVRFSLDRSISPNRSISVAPRT-GAPTTVKRQGQQKRTCMCSPTT 120

Query: 121 HPGSFRCSLHKGVQSQP---STPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIR 180
           HPGSFRCSLHKG  +     + PYS NRLNARRSAMTNSLVRI GVEGD+++RAL++LIR
Sbjct: 121 HPGSFRCSLHKGFSASSHAAAAPYSPNRLNARRSAMTNSLVRIRGVEGDLVKRALSALIR 180

Query: 181 PSSHSQRRRADFCPRPSRLSIMSKADD 203
           PSSH QRRR DF PRPSRLS+MSKAD+
Sbjct: 181 PSSHQQRRRGDFHPRPSRLSVMSKADE 205

The following BLAST results are available for this feature:

BLAST of Cla018683 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YH5D_SCHPO	5.6e-08	30.21	Uncharacterized serine-rich protein C215.13 OS=Schizosaccharomyces pombe (strain...	[more]
TPRXL_HUMAN	2.4e-06	35.76	Putative protein TPRXL OS=Homo sapiens GN=TPRXL PE=5 SV=2	[more]

BLAST of Cla018683 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW36_CUCSA	2.3e-101	96.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264020 PE=4 SV=1	[more]
A0A0A0LL69_CUCSA	1.3e-72	73.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009440 PE=4 SV=1	[more]
I3SMU6_MEDTR	2.0e-65	71.29	Plant/F18G18-20 protein OS=Medicago truncatula GN=MTR_4g116277 PE=2 SV=1	[more]
M5VR32_PRUPE	2.7e-65	70.53	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011611mg PE=4 SV=1	[more]
I3SY62_MEDTR	4.5e-65	71.15	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]

BLAST of Cla018683 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457949\|ref\|XP_004146710.1\|	3.3e-101	96.06	PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis sativus]	[more]
gi\|659086409\|ref\|XP_008443919.1\|	8.2e-100	94.58	PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo]	[more]
gi\|1009110112\|ref\|XP_015893789.1\|	3.8e-73	75.85	PREDICTED: uncharacterized protein LOC107427897 [Ziziphus jujuba]	[more]
gi\|700205637\|gb\|KGN60756.1\|	1.9e-72	73.40	hypothetical protein Csa_2G009440 [Cucumis sativus]	[more]
gi\|1021473470\|ref\|XP_016199696.1\|	1.1e-69	72.46	PREDICTED: uncharacterized protein LOC107640704 [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU35097	watermelon EST collection version 2.0	transcribed_cluster
WMU38536	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU73172	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla018683	Cla018683.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU38536	WMU38536	transcribed_cluster
WMU73172	WMU73172	transcribed_cluster
WMU35097	WMU35097	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33132	FAMILY NOT NAMED	coord: 25..203 score: 9.6
None	No IPR available	PANTHER	PTHR33132:SF12	SUBFAMILY NOT NAMED	coord: 25..203 score: 9.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla018683	Cla97C06G121090	Watermelon (97103) v2	wmwmbB406
Cla018683	Csa2G009440	Cucumber (Chinese Long) v2	cuwmB175
Cla018683	Csa1G264020	Cucumber (Chinese Long) v2	cuwmB080
Cla018683	MELO3C010275	Melon (DHL92) v3.5.1	mewmB293
Cla018683	MELO3C004434	Melon (DHL92) v3.5.1	mewmB436
Cla018683	ClCG06G011900	Watermelon (Charleston Gray)	wcgwmB344
Cla018683	CSPI02G02450	Wild cucumber (PI 183967)	cpiwmB179
Cla018683	CSPI01G17130	Wild cucumber (PI 183967)	cpiwmB086
Cla018683	Cucsa.350570	Cucumber (Gy14) v1	cgywmB629
Cla018683	Cucsa.132790	Cucumber (Gy14) v1	cgywmB226
Cla018683	CmaCh05G012380	Cucurbita maxima (Rimu)	cmawmB774
Cla018683	CmaCh11G005040	Cucurbita maxima (Rimu)	cmawmB143
Cla018683	CmaCh10G005040	Cucurbita maxima (Rimu)	cmawmB071
Cla018683	CmoCh12G011770	Cucurbita moschata (Rifu)	cmowmB169
Cla018683	CmoCh05G012660	Cucurbita moschata (Rifu)	cmowmB768
Cla018683	CmoCh11G004990	Cucurbita moschata (Rifu)	cmowmB128
Cla018683	CmoCh10G005380	Cucurbita moschata (Rifu)	cmowmB063
Cla018683	Lsi11G003950	Bottle gourd (USVL1VR-Ls)	lsiwmB123
Cla018683	Lsi06G010670	Bottle gourd (USVL1VR-Ls)	lsiwmB420
Cla018683	Cp4.1LG04g09150	Cucurbita pepo (Zucchini)	cpewmB679
Cla018683	Cp4.1LG11g10200	Cucurbita pepo (Zucchini)	cpewmB125
Cla018683	CsGy1G017350	Cucumber (Gy14) v2	cgybwmB079
Cla018683	CsGy2G002530	Cucumber (Gy14) v2	cgybwmB166
Cla018683	MELO3C004434.2	Melon (DHL92) v3.6.1	medwmB422
Cla018683	MELO3C010275.2	Melon (DHL92) v3.6.1	medwmB288
Cla018683	Carg17448	Silver-seed gourd	carwmB0244
Cla018683	Carg27190	Silver-seed gourd	carwmB0572
Cla018683	Carg23014	Silver-seed gourd	carwmB1072
Cla018683	Carg09958	Silver-seed gourd	carwmB0126
Cla018683	CsaV3_2G003620	Cucumber (Chinese Long) v3	cucwmB187
Cla018683	CsaV3_1G028370	Cucumber (Chinese Long) v3	cucwmB091
Cla018683	Bhi02G000730	Wax gourd	wgowmB684

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla018683	Cucurbita pepo (Zucchini)	cpewmB372
Cla018683	Bottle gourd (USVL1VR-Ls)	lsiwmB415