Carg27190-RA (mRNA) Silver-seed gourd

NameCarg27190-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionSerine-rich protein-like protein
LocationCucurbita_argyrosperma_scaffold_486 : 42274 .. 44077 (+)
Sequence length1347
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTAATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCGACTCGTATCAGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTGTGATGGAGATTTTGGTACGTTGGCGAATATCCTCTGGTTTATTAATCTGTTTTCCTCTTCTGAGTTCCCGTCAACGAAGACGGGAGATTCCGACCACTGGTTCGACGGCAGTTACCGATCGTAGCGAAAGGATACGGAATCGGAGGCGAAGCATGGGAATCATATCTGGTTGCCTCTCCAGTAAACCTTTCTGCCGGGAGTTGGACTAGAGAACCTATATAACTTTGTGTATATGCAGCATATATAAATATATGGAAGACATATATAGTTGCCGCGACATTGATAACAATTCGTGGAGCTTCTGGACACTAATTTTTCACCAATTTCAAAATTTAACAGTCAATTCATTCCTAAATGCTCTGGTCTCGAACTAATTTCAAATGGAACGATAAAATTAATTTCGTCTGCCAATCGGTGAAATCAGTTCATTCAGTTAATGTTCCACGAACTCGCTTCGTACTGTTTCCAGAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGGTAAAGTAATTTTATCTTTAATCTTCCTATTCCTCTGTTTCTTCGAGTTTTCAGTTCGTTATAATGTCTGTTTATGTTCTGTATACAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAAGTATGAATTTGTGATCAGAAAGTAGGATTAATGATTGAGAAATTAGGCGGAGATGGTTCAAGTTTGGACGAAGTTGTGAACACAAAACTGAACAAATTCAATTCAAATTAACTGGAATCTATACACCACATAAAATAAATGTTAAAAGAAACAAGTTGAAGGAAAGAATTGGACGGAAGAAAACTGAAACATACGAAATCATGATGATATGGTGCGGTAGACGGTGGAGGTGGATGGTAAACCTGGTGATGTTCCAAATCGGTGGAGAGACCGACTTGTACCTCCACACGAAAAACCAATCCGAAGAACAAACCCTATCAAATGTTCATCAATTATTGAAATTCTACCCATTTTTGTATTATGAACTTGATGATACTCAACGAGAGCGTTACCTCCCCCCATATCCAAGATTAGGATGGTGAGACATGCAGCACAAATTGATATACATCACTAAGTTCA

mRNA sequence

ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTAATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCGACTCGTATCAGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTACGGGAGATTCCGACCACTGGTTCGACGGCAGTTACCGATCGTAGCGAAAGGATACGGAATCGGAGGCGAAGCATGGGAATCATATCTGGTTGCCTCTCCAAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAAGTATGAATTTGTGATCAGAAAGTAGGATTAATGATTGAGAAATTAGGCGGAGATGGTTCAAGTTTGGACGAAGTTGTGAACACAAAACTGAACAAATTCAATTCAAATTAACTGGAATCTATACACCACATAAAATAAATGTTAAAAGAAACAAGTTGAAGGAAAGAATTGGACGGAAGAAAACTGAAACATACGAAATCATGATGATATGGTGCGGTAGACGGTGGAGGTGGATGGTAAACCTGGTGATGTTCCAAATCGGTGGAGAGACCGACTTGTACCTCCACACGAAAAACCAATCCGAAGAACAAACCCTATCAAATGTTCATCAATTATTGAAATTCTACCCATTTTTGTATTATGAACTTGATGATACTCAACGAGAGCGTTACCTCCCCCCATATCCAAGATTAGGATGGTGAGACATGCAGCACAAATTGATATACATCACTAAGTTCA

Coding sequence (CDS)

ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTAATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCGACTCGTATCAGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTACGGGAGATTCCGACCACTGGTTCGACGGCAGTTACCGATCGTAGCGAAAGGATACGGAATCGGAGGCGAAGCATGGGAATCATATCTGGTTGCCTCTCCAAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAAGTATGA

Protein sequence

MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSRINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQRRRADFCPRPSRLSNMSKADDLREIPTTGSTAVTDRSERIRNRRRSMGIISGCLSKRLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFEV
BLAST of Carg27190-RA vs. NCBI nr
Match: XP_022933728.1 (uncharacterized protein LOC111441057 [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 6.6e-78
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

BLAST of Carg27190-RA vs. NCBI nr
Match: XP_023530348.1 (uncharacterized protein LOC111792947 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 6.6e-78
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

BLAST of Carg27190-RA vs. NCBI nr
Match: XP_022966156.1 (uncharacterized protein LOC111465917 [Cucurbita maxima])

HSP 1 Score: 297.0 bits (759), Expect = 7.3e-77
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  XXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 202
           RRADFCPR SRLSNMSKADDL
Sbjct: 181 RRADFCPRRSRLSNMSKADDL 201

BLAST of Carg27190-RA vs. NCBI nr
Match: XP_022960906.1 (uncharacterized protein LOC111461568 [Cucurbita moschata])

HSP 1 Score: 261.5 bits (667), Expect = 3.4e-66
Identity = 165/206 (80.10%), Postives = 170/206 (82.52%), Query Frame = 0

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYS-----SSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPV+RSLSPSGRF  SYS       XXXXXXXXXXXXXXXX          
Sbjct: 1   MAVSSRKSSGPVMRSLSPSGRFCRSYSXXXXXXXXXXXXXXXXXXXXXXXNPTSFFRRSL 60

Query: 61  XXXXXXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPT 120
                      SS SASSVRF+LDRSISPNR ISV TR  GNQVVKRQSNQKRTC+CSPT
Sbjct: 61  SPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSPT 120

Query: 121 THPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPS 180
           THPGSFRCSLHKGVPSQP+TPYSSNRLNARRSAMTNSLVRIGGVEGDLV+RALASLIRPS
Sbjct: 121 THPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSLVRIGGVEGDLVRRALASLIRPS 180

Query: 181 SHSQRRRADFCPRPSRLSNMSKADDL 202
           SHSQRRRADFCPRPSRLS MSKADDL
Sbjct: 181 SHSQRRRADFCPRPSRLSIMSKADDL 206

BLAST of Carg27190-RA vs. NCBI nr
Match: XP_023516526.1 (putative protein TPRXL [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 4.4e-66
Identity = 164/207 (79.23%), Postives = 170/207 (82.13%), Query Frame = 0

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSY------SSSXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSR+SSGPV+RSLSPSGRF GSY         XXXXXXXXXXXXXXXX         
Sbjct: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYXXXXXXXXXXXXXXXXXXXXXXXXXNPTSFFRRS 60

Query: 61  XXXXXXXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSP 120
                       SS SASSVRF+LDRSISPNR ISV TR  GNQVVKRQSNQKRTC+CSP
Sbjct: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRP 180
           TTHPGSFRCSLHKGVPSQP+TPYSSNRLNARRSAMTNSLVRIGGVEGDLV+RALASLIRP
Sbjct: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSLVRIGGVEGDLVRRALASLIRP 180

Query: 181 SSHSQRRRADFCPRPSRLSNMSKADDL 202
           SSHSQRRRADFCPRPSRLS MSKADDL
Sbjct: 181 SSHSQRRRADFCPRPSRLSIMSKADDL 207

BLAST of Carg27190-RA vs. TAIR10
Match: AT5G11090.1 (serine-rich protein-related)

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36
Identity = 131/215 (60.93%), Postives = 148/215 (68.84%), Query Frame = 0

Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSS-------------XXXXXXXXXXXXXXXXXXXXX 63
           S  KS+GPVLRS SPSGRF G YS +             XXXXXXXXXXXXXXXXXXXXX
Sbjct: 6   SRTKSNGPVLRSQSPSGRFCGGYSRAVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 65

Query: 64  XXXXXXXXXXXXXXXXSSPSASSVRFSLD-RSISP-NRPISVSTRISGNQVVKRQSNQKR 123
           XXXXXXX         + P + S R+SLD RSISP N+ ISVS     NQ         R
Sbjct: 66  XXXXXXXSPTRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSK----NQPPSHNHKISR 125

Query: 124 TCMCSPTTHPGSFRCSLHKGVPS---QPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVK 183
            CMCSPTTHPGSFRCSLHK V +   Q +  Y++N LN RRSAMTNSLVRIGGVEG+ V+
Sbjct: 126 RCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVR 185

Query: 184 RALASLIRPSSHSQRRRADFCPRPSRLSNMSKADD 201
           RAL +LIRPSSH  +RRA + PRPSRLS M+KAD+
Sbjct: 186 RALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

BLAST of Carg27190-RA vs. TAIR10
Match: AT5G25280.1 (serine-rich protein-related)

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-35
Identity = 83/139 (59.71%), Postives = 104/139 (74.82%), Query Frame = 0

Query: 67  SSPSASSVRFSLD-RSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGSFRCSL 126
           S+P   S R+S+D RSISPNR I+VS+    N    +  + +R CMCSPTTHPGSFRCSL
Sbjct: 84  SAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNH--HKIPDSRRRCMCSPTTHPGSFRCSL 143

Query: 127 HKGVPS---QPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQRRR 186
           HK V +   Q +  Y++N LN RRSAMTNSLVRIGGVEG+ V+RAL +LIRPSSH  +RR
Sbjct: 144 HKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHQLKRR 203

Query: 187 ADFCPRPSRLSNMSKADDL 202
           + + PR SRL++MSKA+DL
Sbjct: 204 SAYEPRRSRLASMSKAEDL 220

BLAST of Carg27190-RA vs. TAIR10
Match: AT5G20370.1 (serine-rich protein-related)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-13
Identity = 47/109 (43.12%), Postives = 61/109 (55.96%), Query Frame = 0

Query: 100 VKRQSNQKRTCMCSPTTHPGSFRCSLHKGVPSQPSTPYSS------NR----------LN 159
           V      KR C+CSPTTHPGSFRCS H+ +  + S   +S      NR          LN
Sbjct: 61  VSSNHQTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLN 120

Query: 160 ARRSAMTNSLVRIGGVEGDLVKRAL-ASLIRPSSHSQRRRADFCPRPSR 192
            R+ A+ NSL +IG VE +  +R+L A+L +PSS    RR +F PR SR
Sbjct: 121 LRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

BLAST of Carg27190-RA vs. TAIR10
Match: AT1G67910.1 (unknown protein)

HSP 1 Score: 46.2 bits (108), Expect = 4.1e-05
Identity = 19/38 (50.00%), Postives = 29/38 (76.32%), Query Frame = 0

Query: 96  GNQVVKRQSNQKRT-CMCSPTTHPGSFRCSLHKGVPSQ 133
           G++ + RQ++  +T C+CSPTTHPGSFRC +H+ +  Q
Sbjct: 29  GSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQ 66

BLAST of Carg27190-RA vs. TAIR10
Match: AT1G24577.1 (unknown protein)

HSP 1 Score: 42.0 bits (97), Expect = 7.6e-04
Identity = 19/44 (43.18%), Postives = 27/44 (61.36%), Query Frame = 0

Query: 101 KRQSNQKRTCMCSPTTHPGSFRCSLHKGVPSQPSTPYSSNRLNA 145
           ++ S  K  C+CSPTTHPGSF+C LH+    Q +    +N L +
Sbjct: 23  RQTSITKTICICSPTTHPGSFKCKLHRTPSLQRNKSVETNILQS 66

BLAST of Carg27190-RA vs. TrEMBL
Match: tr|A0A1S4DUZ2|A0A1S4DUZ2_CUCME (uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC103487397 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.5e-59
Identity = 168/203 (82.76%), Postives = 175/203 (86.21%), Query Frame = 0

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120
                 X            DRSISPNRPISV +R +GN QVVK+QS+QKRTCMCSPTTHP
Sbjct: 61  RVNLQGXXXXXXXXXXXXXDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180
           GSFRCSLHKGV S PSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSNMSKADDL 202
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

BLAST of Carg27190-RA vs. TrEMBL
Match: tr|A0A0A0LW36|A0A0A0LW36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.8e-55
Identity = 169/203 (83.25%), Postives = 174/203 (85.71%), Query Frame = 0

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120
           XXXXXXX                   RPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSNMSKADDL 202
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

BLAST of Carg27190-RA vs. TrEMBL
Match: tr|A0A2I4EMR7|A0A2I4EMR7_9ROSI (uncharacterized protein LOC108991002 OS=Juglans regia OX=51240 GN=LOC108991002 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.7e-54
Identity = 153/202 (75.74%), Postives = 163/202 (80.69%), Query Frame = 0

Query: 2   AVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 61
           A S R SSGPV+RSL+PSGRFY S+S S    XXXXXXXXXXXXXXXXXXXXX       
Sbjct: 3   ATSRRSSSGPVVRSLAPSGRFYDSHSPS-RYSXXXXXXXXXXXXXXXXXXXXXRSASPTR 62

Query: 62  XXXXXSSPSASSVRFSLDRSISPNRPISVSTRISG---NQVVKRQSNQKRTCMCSPTTHP 121
                +SPSA SVRFSLDRSISP+R ISVS R +G   NQVVKRQ  QKRTCMCSPTTHP
Sbjct: 63  VNMCGTSPSARSVRFSLDRSISPSRSISVSPRGNGGGSNQVVKRQ-GQKRTCMCSPTTHP 122

Query: 122 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 181
           GSFRCSLHKG  SQ   PYS NRLNARRSAMTNSLVRIGGVEGDLVKRALA+LIRPSSH 
Sbjct: 123 GSFRCSLHKGSGSQSVAPYSPNRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQ 182

Query: 182 QRRRADFCPRPSRLSNMSKADD 201
           Q+RRADF PRPSRLS MSKA++
Sbjct: 183 QKRRADFLPRPSRLSVMSKAEE 202

BLAST of Carg27190-RA vs. TrEMBL
Match: tr|A0A1S4E2K6|A0A1S4E2K6_CUCME (uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.5e-51
Identity = 127/204 (62.25%), Postives = 141/204 (69.12%), Query Frame = 0

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA +SR+SS  VLRSLSPSGRFYG  +SS                               
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSS-----SSAFASSTSTFSSRSATSFFCRSTSP 60

Query: 61  XXXXXXSSPSAS--SVRFSLDRSISPNRPISVSTRISG--NQVVKRQSNQKRTCMCSPTT 120
                  SPS S  SVRFSLDR+ SPNR +SVS+  SG  N+VV+RQS+ KRTCMCSPTT
Sbjct: 61  SRVNLHGSPSVSVPSVRFSLDRATSPNRSVSVSSPRSGGTNRVVQRQSSSKRTCMCSPTT 120

Query: 121 HPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSS 180
           HPGSFRCSLHKG+ SQP   YS +RLNARRSAMTNSLVRIGGVEGDLVKRALA+LIRPSS
Sbjct: 121 HPGSFRCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSS 180

Query: 181 HSQRRRADFCPRPSRLSNMSKADD 201
           H QRRR DF P+ SRLS MSKAD+
Sbjct: 181 HQQRRRVDFRPKRSRLSIMSKADE 199

BLAST of Carg27190-RA vs. TrEMBL
Match: tr|A0A0A0LL69|A0A0A0LL69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.5e-51
Identity = 127/204 (62.25%), Postives = 141/204 (69.12%), Query Frame = 0

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA +SR+SS  VLRSLSPSGRFYG  +SS                               
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSS-----SSAFASSTSTFSSRSATSFFCRSTSP 60

Query: 61  XXXXXXSSPSAS--SVRFSLDRSISPNRPISVSTRISG--NQVVKRQSNQKRTCMCSPTT 120
                  SPS S  SVRFSLDR+ SPNR +SVS+  SG  N+VV+RQS+ KRTCMCSPTT
Sbjct: 61  SRVNLHGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMCSPTT 120

Query: 121 HPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSS 180
           HPGSFRCSLHKG+ SQP   YS +RLNARRSAMTNSLVRIGGVEGDLVKRALA+LIRPSS
Sbjct: 121 HPGSFRCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSS 180

Query: 181 HSQRRRADFCPRPSRLSNMSKADD 201
           H QRRR DF P+ SRLS MSKAD+
Sbjct: 181 HQQRRRVDFRPKRSRLSIMSKADE 199

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022933728.16.6e-78100.00uncharacterized protein LOC111441057 [Cucurbita moschata][more]
XP_023530348.16.6e-78100.00uncharacterized protein LOC111792947 [Cucurbita pepo subsp. pepo][more]
XP_022966156.17.3e-7799.50uncharacterized protein LOC111465917 [Cucurbita maxima][more]
XP_022960906.13.4e-6680.10uncharacterized protein LOC111461568 [Cucurbita moschata][more]
XP_023516526.14.4e-6679.23putative protein TPRXL [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G11090.12.0e-3660.93serine-rich protein-related[more]
AT5G25280.11.7e-3559.71serine-rich protein-related[more]
AT5G20370.11.4e-1343.12serine-rich protein-related[more]
AT1G67910.14.1e-0550.00unknown protein[more]
AT1G24577.17.6e-0443.18unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S4DUZ2|A0A1S4DUZ2_CUCME4.5e-5982.76uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A0A0LW36|A0A0A0LW36_CUCSA6.8e-5583.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1[more]
tr|A0A2I4EMR7|A0A2I4EMR7_9ROSI5.7e-5475.74uncharacterized protein LOC108991002 OS=Juglans regia OX=51240 GN=LOC108991002 P... [more]
tr|A0A1S4E2K6|A0A1S4E2K6_CUCME4.5e-5162.25uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=... [more]
tr|A0A0A0LL69|A0A0A0LL69_CUCSA4.5e-5162.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1[more]
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg27190Carg27190gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg27190-RACarg27190-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg27190-RA.exon.1Carg27190-RA.exon.1exon
Carg27190-RA.exon.2Carg27190-RA.exon.2exon
Carg27190-RA.exon.3Carg27190-RA.exon.3exon
Carg27190-RA.exon.4Carg27190-RA.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg27190-RA.CDS.1Carg27190-RA.CDS.1CDS
Carg27190-RA.CDS.2Carg27190-RA.CDS.2CDS
Carg27190-RA.CDS.3Carg27190-RA.CDS.3CDS
Carg27190-RA.CDS.4Carg27190-RA.CDS.4CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg27190-RA.three_prime_UTR.1Carg27190-RA.three_prime_UTR.1three_prime_UTR


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..78
NoneNo IPR availablePANTHERPTHR33132:SF12SUBFAMILY NOT NAMEDcoord: 7..200
NoneNo IPR availablePANTHERPTHR33132FAMILY NOT NAMEDcoord: 7..200