Carg27119 (gene) Silver-seed gourd

Overview
NameCarg27119
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPeptide chain release factor, putative
LocationCucurbita_argyrosperma_scaffold_366 : 82232 .. 87318 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCATTTTGATCGAAAACCCACACAGAAGCTGCAACATGAAAAATCGGGAGTCCATGGCATATCTCTCATAGCAGGAAGCCATGATTTTCCACATCAGTGACTTCAAGCCACAACTTGTTCGTAACCATGATTAAAAACGACCCAATTTTGAAAACCACATTATCGTTGTGAAAAAACAAAACCCAATAGGAGAAATTCGTTTTGTGAATTGCGAAAATGGCAACCGCAAATATGCTCTGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCAATTCGAGGGCTCTTTCTTCTCCAACTCACTGCGTTCCAATTGCAGCTCTAGCAGTGCAAATTCAATATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGATGAGACAGTGCGAAATGGACACGTTTAAGGCCTCAGGTCCCGGTGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCTCAGGTTTATATTTGTCTGATAAATATAGTCAAGTTCAATTATATACTTCAGCTTCTTAGCTCTCAAGTTAATCTTTGGCCCTTTATTTCCAAGGCTGTCGAGGATCGATCACAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGGTGGCTGGATTGTACATGCTTGTTTGTTTTTTAATTTCATTTTCCGTAAGGTTGGTTCTCCTGATGAATGATATATGCCATGCGTTGTTGTATTGAGCTCAGTCAGGAACCCTGTGGATCTTGAAGATTATTCGCCTCCGCCAGAGCTTCTCCAAATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGTTACTCTCTATTTTCTTTCTGTCTATGTTTCTGTTTACATGTGGGTGTGTGTTTATAATTTGATTTTCTTGATATAAGAGAAGGATATGAAGGTGATAATCGAAATTACCTATTTTGCAGGGCATGCAAGCTCTATTGGATTTAATTTACACACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTATGTTTGCTATTCATTCATGTGTTGGCTTTTGTTTCTTATTACTTTATTTCCACCATAACTAAGCATCCACAGTCGAACGTAGAGGATGGGAGTGGTTCAATTCTGTGAGGAGATTGGGATTTTATCAAGAAACTAAGAGAGCTGATGTACGGATGTTTGTGGTTTATAGGAGTGAATAAGAATTATAATTTTCTCATGGGCATGAGGGAAAGGAGTTAAGACCTCCGGAAGGTGCTGGAGGATATTTTTCATACGAAGTGTCTTGTTTGTTGGAGTCTAAGTCTTGCCTTATGATTTGAAGTAATAGCCTAAGCCCACCACTAGTAGATATTGTCCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGTATCTGCCAGGGAGAGGTTTTCACACTCTTATAAAGGGAGTTTCGTTCTCCTCGCCTACTGAGGAAGTGGACCAAATTTGGTTTTTGAGAGAGCTTTTGAGTTTGGTAACTGGTTATGATGGTTGTTCATCATTTTCTATTAACATACTTTGGATTATATTAAAATTAATTGAGAGTTATTTCTGAATTTGACAAGATAGATGTCAACTTGACCATCGATGGAAATTATATTCGTTTCATACCCGAAGGACTTAACTTATTGGAATAGCAACTGTAGAACGATTAATCTTTATTTTATGGGAATGTCAGCTACATATTGAATATTTTCTCATTGACATTCCATCATTGGCACTATTTTTAGCTGTCAACATAGATGATATTAAAAGATGATCCGTAGTTAAGATATAAACCTGGTTTCCACTATTTCAAAAAGAGATAAACGTGTGACAGTGTTAATATTAATAGCAAAGTGATAGATATGTACGAGACATTAAGCATAAGTAGTCCGATTAATTGATGCAGGTGGAACAGTTGAATTACAATTTAGATAAATAGTTAAAAGATAAATCTTATGTTTCCCGTTTCTAATATGTTAATGATATAGATTAGCTGCACGCTAATAGTTCTATTAATCTTGAATATTTTAGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGTAACACCATCCTATTTTTGAGAAACTATGTCGCATCTCTGCATAATTATTTAATTTCCTTTTATGAAAGTTGGTTTCTTATCGAAAACATTATTTCTTTACTAAATTGTGCTTGAGAAGTCAAATTCTTGGAATATTTAGTGTGATCATGTTCCTTCCGATTTATCGGATGTTCCCGAAGGGACAATCTGTTTTCATGTTTTGAAATGTTAACGGTAAATGTCAGCTTGTTGAGAGAGCCAGCTTGGTAATTTTAATTTGTAAGCATCATAATACATAGCTAATTAATTATGTGGCATCCACTTCAAAACTCAATATAGAAGTGGTAACTTATTTTGCTTCTGTAAGTCGTCCTGCATCTCTGGTTCTAACCCTACATGCCAGACTAGAGAAAGGTGGTAGTTGTCTTTTGCAAAACTTTTGGCTGCTTGGCTCAAATTAAATGTCTACAGGTGTTATTGTTCTATTAGTATAGTTATATTTTCCGTAAATATATTAGTTGTCTTGTCCTTTTTTGTCTTTTTACTTTCTCCGACTTAGGGTAACCTCGTATATAAATCTCTTTAGTGAATGGAATAGAATATTCTAATTCGCTCGAACTTTTAGCATTTACATGATATCAGAGAATTACATCAATTAGTTACTAAAAGAATCTAAGCCAAAAGGACTTTAGACCCCCCATGCTCTCCACTCTCTCCTCCTTTCCAACCCCAATCCTTCATTATTCAAGATAAGTTTCTTCATCTCATTTAGCTATTATTAAGATCAGTTTGTAAGTATGGTGTTGAGTAGTACTTCTGCCATGAAAGAGAGAAGTTGTTGTGTCAATAATAAGTACTTCACAGCCTATGGTTCAAAGATAAGTTTTTTATCAAAGAATGAAGAGCAATTTGTCTATACATACCCTTATCCCATCTTTGTTGGTTTGAAAGTTCACTTGATGATCTTTTGCAACTTCTGATGTCGATGCATTTCTTAAAACAATTCCGAGACAGCAGTGGTACAATCTGTCAGTTGAAACTTTGAGTGCATTATCTGGCTTCCTTCCGGAGGAAGAAAGGATGACTTATTTTCTAGGAGATGATTAAGGACTTTCATGTGTATTATGAAGTTAGCATCAATATTTCGAATCAGACAGCAGCTAAAAAAATCAAGTCTCCTACCAATAGATATGCATGTGTTGCGATGAAGTTCTCATATGGAAAGCAAACAATAAAGCTGGCTCTAAACTGTAACTAGCTTCTCCAAGATCTTCACCTCTGTGGGAATGAATTTTTGGTTGCAAAAGAAAAGGAAGTGGCTAGTGTTGATTGGAGTTCTTTTATGGTAATATCACGTTTAAATCCCCATGATGATTGAAATGATATCAAAAAGGCAATTGAAAAAAAAAAAAAAGAAAAAATAGGCTACTTTTGTGATAAATCCGTTCATGGCTGATTAGGCTCTTTGCAAATGGAAGATGGCATGCGTTTAGGTGGTTCTTGGGACATAAGGAAAATTGATGAATTGAAATCCTTTTCATATCAAGTTTGAATATTGGTCTTTCAAGAAGCATAGGAAGTCAGAATTTAGGGTGGGTTATGGATGAACTTTCATGATACCAATTGATAATTCGGTGACGATTCATGATAATAGTCGAAAGGTTGATTCCCAAACACTACTCATTGTGCTATTAGTAACCTTCCCACTTATTCTCTCTCTCTCTCTCTCTGTTCATTATTCCAAGCAAAGTGTACAAAATAGTAGACAGGCTCTACAAGAAACTTCTCTGACAAGGGAGCAAACTGGGTTGAGTTTTCACCTTGTTATATGGGATAAGCTTCTCCATCCCATTGAAAAATGTCGTCTAGGGTCGTTTCCCTTTGAAGGAAAAGAACAAAGCTCGGACAGCAAAGTGGACTTAAAGATATTATCATGAGAGATGCCCTATGGAGGAAGCTTATATGGTGTAAATATGGGACACTCTCTGCCGCTCCCCATCCATCGACCGTTTCTGCAACAAGACCATGGCAAGCCTTGAAAAGGCAGAAATATTTTGTTGCTAGTTGTATTCGCGACCTTGTAGGCGACAAGGCCCATACTTTGTTTGGGAACGACCTTTGGTTATCGAATATAAGATTGGCTAGCAAGTTTCCTCCTCTATAGACTCGCTAGGCGAAAATTGATTACTGTAAAGGAGACCTGAGAACCGGACAGAAGCCTTTGGAACCTTCACTTTGGTAGAAATCTCAAAGATGAAGATGCTTGTGAATGGCCGGAATTGATTAATATGCAGCAGCAGTTTACTCTTTTTCTTGGCAATGAATGGCCAACCCAAATGGGTTTTATACATCAAAATCTCTGTATTGACATATTTTTCATATTTTTGAATAGGGTATCATAAATATATAATGAATTTTGAAATTTACAGGGTATGAAGCCACTGAAGTAGAAAAGGGGAAGCTCAAGGACTGTATCGGGTGGTGGGTACTCCATGAAGCAACCTCATTTCCGGAGATTCATCGTTGAGTTGAAAAGATGTAAGTTTCTTGTATTTATATTGATATTAGATGCGATTTGATGATAATGAGGAAATATGAAATTTTTATGAGAGGACTAAGATGGTGTATGTAATTAAAGCATCAATCAATCTCTGCCGAAACACATTCCTATTACTACACACTATCTTAAAGTGTGGAGAAAACTCCTGTTTCTTGCAAATCTCAAGTTTTTGGTGCTTTCCAGACATGGAACATTCATTTTTTTACCATGCTAAAGTTTATAGATTATTATCCTGAACATTCAATTCACCGAACGAGATAACACATGTTTTTACTTACTTCTCTACAGATA

mRNA sequence

TTCATTTTGATCGAAAACCCACACAGAAGCTGCAACATGAAAAATCGGGAGTCCATGGCATATCTCTCATAGCAGGAAGCCATGATTTTCCACATCAGTGACTTCAAGCCACAACTTGTTCGTAACCATGATTAAAAACGACCCAATTTTGAAAACCACATTATCGTTGTGAAAAAACAAAACCCAATAGGAGAAATTCGTTTTGTGAATTGCGAAAATGGCAACCGCAAATATGCTCTGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCAATTCGAGGGCTCTTTCTTCTCCAACTCACTGCGTTCCAATTGCAGCTCTAGCAGTGCAAATTCAATATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGATGAGACAGTGCGAAATGGACACGTTTAAGGCCTCAGGTCCCGGTGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCTCAGGCTGTCGAGGATCGATCACAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGTCAGGAACCCTGTGGATCTTGAAGATTATTCGCCTCCGCCAGAGCTTCTCCAAATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGGCATGCAAGCTCTATTGGATTTAATTTACACACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGGTATGAAGCCACTGAAGTAGAAAAGGGGAAGCTCAAGGACTGTATCGGGTGGTGGGTACTCCATGAAGCAACCTCATTTCCGGAGATTCATCGTTGAGTTGAAAAGATGTAAGTTTCTTGTATTTATATTGATATTAGATGCGATTTGATGATAATGAGGAAATATGAAATTTTTATGAGAGGACTAAGATGGTGTATGTAATTAAAGCATCAATCAATCTCTGCCGAAACACATTCCTATTACTACACACTATCTTAAAGTGTGGAGAAAACTCCTGTTTCTTGCAAATCTCAAGTTTTTGGTGCTTTCCAGACATGGAACATTCATTTTTTTACCATGCTAAAGTTTATAGATTATTATCCTGAACATTCAATTCACCGAACGAGATAACACATGTTTTTACTTACTTCTCTACAGATA

Coding sequence (CDS)

ATGGCAACCGCAAATATGCTCTGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCAATTCGAGGGCTCTTTCTTCTCCAACTCACTGCGTTCCAATTGCAGCTCTAGCAGTGCAAATTCAATATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGATGAGACAGTGCGAAATGGACACGTTTAAGGCCTCAGGTCCCGGTGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCTCAGGCTGTCGAGGATCGATCACAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGTCAGGAACCCTGTGGATCTTGAAGATTATTCGCCTCCGCCAGAGCTTCTCCAAATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGGCATGCAAGCTCTATTGGATTTAATTTACACACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGGTATGAAGCCACTGAAGTAG

Protein sequence

MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSNCSSSSANSIWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Homology
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BLAST of Carg27119 vs. NCBI nr
Match: XP_023523846.1 (uncharacterized protein LOC111787964 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.5 bits (1212), Expect = 1.7e-129
Identity = 235/237 (99.16%), Postives = 237/237 (100.00%), Query Frame = 0 

Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSNCSSSSANSIW 60
           MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSNCSSSSANS+W
Sbjct: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSNCSSSSANSVW 60

Query: 61  KGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK 120
           KGKEYL+LSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK
Sbjct: 61  KGKEYLVLSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK 120

Query: 121 NRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP 180
           NRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP
Sbjct: 121 NRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP 180

Query: 181 GMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           GMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Sbjct: 181 GMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 237

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BLAST of Carg27119 vs. NCBI nr
Match: XP_022932469.1 (uncharacterized protein LOC111438876 [Cucurbita moschata])

HSP 1 Score: 469.5 bits (1207), Expect = 6.5e-129
Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0 

Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSNCSSSSANSIW 60
           MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRS CSSSSANS+W
Sbjct: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVW 60

Query: 61  KGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK 120
           KGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK
Sbjct: 61  KGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK 120

Query: 121 NRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP 180
           NRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP
Sbjct: 121 NRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP 180

Query: 181 GMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           GMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Sbjct: 181 GMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 237

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BLAST of Carg27119 vs. NCBI nr
Match: XP_022973451.1 (uncharacterized protein LOC111471993 [Cucurbita maxima])

HSP 1 Score: 463.8 bits (1192), Expect = 3.6e-127
Identity = 232/237 (97.89%), Postives = 235/237 (99.16%), Query Frame = 0 

Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSNCSSSSANSIW 60
           MAT NMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSNCSSSSA S+W
Sbjct: 1   MATTNMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSNCSSSSAISVW 60

Query: 61  KGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK 120
           KGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK
Sbjct: 61  KGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK 120

Query: 121 NRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP 180
           NRASALARLRAQLALKVRNPV+LEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP
Sbjct: 121 NRASALARLRAQLALKVRNPVNLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP 180

Query: 181 GMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           GMQ+LLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Sbjct: 181 GMQSLLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 237

[Close]
BLAST of Carg27119 vs. NCBI nr
Match: XP_008459491.1 (PREDICTED: uncharacterized protein LOC103498609 isoform X1 [Cucumis melo])

HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-106
Identity = 203/240 (84.58%), Postives = 214/240 (89.17%), Query Frame = 0 

Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRI--HQFEGS-FFSNSLRSNCSSSSAN 60
           MA ANMLW SAKIL  P PIASN RW R G  FR   H FEGS FF NSLR NCSSS+AN
Sbjct: 1   MANANMLWNSAKILGFPAPIASNVRWARFGYKFRFRHHPFEGSFFFFNSLRFNCSSSNAN 60

Query: 61  SIWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRS 120
           S+  GKEYL+LSDEELM+QCEM TFKASGPGGQHRNKRESAVRLKHIPTGI AQAVEDRS
Sbjct: 61  SVCSGKEYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRS 120

Query: 121 QHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSK 180
           QHKNR+SALARLRA LALKVRNPVDLEDYSPPPELLQILP KST+RPP CGPQIGPNNSK
Sbjct: 121 QHKNRSSALARLRALLALKVRNPVDLEDYSPPPELLQILPPKSTVRPPECGPQIGPNNSK 180

Query: 181 FLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           FLPGMQALLDLI TLDGS+SDTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKGMKPLK
Sbjct: 181 FLPGMQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGMKPLK 240

[Close]
BLAST of Carg27119 vs. NCBI nr
Match: XP_004141513.1 (PREDICTED: uncharacterized protein LOC101217430 [Cucumis sativus] >KGN52594.1 hypothetical protein Csa_5G646680 [Cucumis sativus])

HSP 1 Score: 392.9 bits (1008), Expect = 7.8e-106
Identity = 201/240 (83.75%), Postives = 215/240 (89.58%), Query Frame = 0 

Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQ--FEGS-FFSNSLRSNCSSSSAN 60
           MA ANMLW SAKIL  P PIASN RW R   TFR+    FEGS FF NSLR NCSSS+AN
Sbjct: 1   MANANMLWSSAKILGFPSPIASNVRWARFDYTFRLRHRPFEGSFFFFNSLRFNCSSSNAN 60

Query: 61  SIWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRS 120
           S+  GK+YL+LSDEELM+QCEM TFKASGPGGQHRNKRESAVRLKHIPTGI AQAVEDRS
Sbjct: 61  SVCNGKQYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRS 120

Query: 121 QHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSK 180
           QHKNR+SALARLRA LALKVRNPVDLEDYSPPPELLQILPLKST+RPP CGPQIGPNNSK
Sbjct: 121 QHKNRSSALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTVRPPECGPQIGPNNSK 180

Query: 181 FLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           FLPGMQALLDLI TLDGS+SDTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKG+KPLK
Sbjct: 181 FLPGMQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGLKPLK 240

[Close]
BLAST of Carg27119 vs. TAIR10
Match: AT1G33330.1 (Class I peptide chain release factor)

HSP 1 Score: 252.3 bits (643), Expect = 3.0e-67
Identity = 141/242 (58.26%), Postives = 172/242 (71.07%), Query Frame = 0 

Query: 6   MLWKSAKILSIPVPI-------ASNGRWGRIGCTFRIHQFEGSFFSNS---LRSNCSSSS 65
           +L +S  +LS P  +        S+G   R+    R    +G    +S     ++  S S
Sbjct: 17  LLRRSIPLLSAPTSVIYNHRTLLSDGLSTRLCSILRYSSSDGVNGGSSGGDFGNDNDSVS 76

Query: 66  ANSIWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVED 125
             S  +   YL  +DEELM+QC ++TF+ SGPGGQHRNKR+SAVRLKH+PTGI AQAVED
Sbjct: 77  VVSDVQSPNYLKFTDEELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVED 136

Query: 126 RSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNN 185
           RSQHKNRASAL RLR  LA+KVRN VD+E Y+PPPELLQILP KSTIR    G QIGPNN
Sbjct: 137 RSQHKNRASALNRLRTLLAIKVRNKVDIEAYAPPPELLQILPPKSTIR-TSSGSQIGPNN 196

Query: 186 SKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKP 238
            KF+PGMQALLD+I   DGSI+D+AK +GL+TG +SRLILS D LRMAVN +R +KG+KP
Sbjct: 197 PKFVPGMQALLDVISASDGSIADSAKLLGLSTGGLSRLILSHDGLRMAVNSMRAAKGIKP 256

[Close]
BLAST of Carg27119 vs. TAIR10
Match: AT1G56350.1 (Peptide chain release factor 2)

HSP 1 Score: 65.9 bits (159), Expect = 3.9e-11
Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = 0 

Query: 62  GKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKN 121
           G   + ++D +L     ++ F++ G GGQH N  +SAVR+ HIPTGITA    +RSQH N
Sbjct: 337 GSTRVEINDSDL----RIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSN 396

Query: 122 RASALARLRAQL 134
           +ASA+A L+++L
Sbjct: 397 KASAMAVLQSRL 404

[Close]
BLAST of Carg27119 vs. TAIR10
Match: AT2G47020.1 (Peptide chain release factor 1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-09
Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 0 

Query: 79  MDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL 134
           +DT+++ G GGQH N   SAVR+ H+PTG+     ++RSQH NRA AL  L A+L
Sbjct: 276 IDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARL 330

[Close]
BLAST of Carg27119 vs. TAIR10
Match: AT5G36170.1 (high chlorophyll fluorescent 109)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-08
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0 

Query: 83  KASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL 134
           +A G GGQ+ NK E+AVR+ HIPTG+  +  E+RSQ  N+  AL RL+A+L
Sbjct: 325 RAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKL 375

[Close]
BLAST of Carg27119 vs. TAIR10
Match: AT3G62910.1 (Peptide chain release factor 1)

HSP 1 Score: 48.1 bits (113), Expect = 8.5e-06
Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 0 

Query: 75  RQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL- 134
           +  E+ + ++ G GGQ+ NK E+A+ L H P+GI     E+R+Q +N+A A   LRA+L 
Sbjct: 275 KDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLY 334

Query: 135 ALKVR 139
            +KVR
Sbjct: 335 EIKVR 339

[Close]
BLAST of Carg27119 vs. Swiss-Prot
Match: sp|A7ZE19|RF2_CAMC1 (Peptide chain release factor 2 OS=Campylobacter concisus (strain 13826) OX=360104 GN=prfB PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.9e-13
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 0 

Query: 75  RQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL 134
           +  ++DT++ASG GGQH NK ESA+R+ HIPTGI  Q   DRSQHKNRA+A+  L+++L
Sbjct: 236 KDLKIDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRL 294

[Close]
BLAST of Carg27119 vs. Swiss-Prot
Match: sp|B1XYX1|RF1_LEPCP (Peptide chain release factor 1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) OX=395495 GN=prfA PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.0e-13
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 0 

Query: 76  QCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLAL 135
           +  +DT++ASG GGQH NK +SAVR+ H+PTG+ A+  +DRSQH+N+A ALA L A+L  
Sbjct: 221 ELRIDTYRASGAGGQHINKTDSAVRVTHLPTGLVAECQDDRSQHRNKARALAVLAARLRD 280

Query: 136 KVRNPVDLEDYSPPPELL 154
           +VR     +D +    L+
Sbjct: 281 RVRQEQAAKDAAARKSLI 298

[Close]
BLAST of Carg27119 vs. Swiss-Prot
Match: sp|A5WFG1|RF1_PSYWF (Peptide chain release factor 1 OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN=prfA PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 0 

Query: 79  MDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL-ALKV 138
           MDTF++SG GGQH N  +SAVRL HIPTG+ A+  ++RSQHKNRA A+  L A++   KV
Sbjct: 227 MDTFRSSGAGGQHVNTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKV 286

Query: 139 RNPVDLED 146
           +  VD  D
Sbjct: 287 QEQVDTAD 294

[Close]
BLAST of Carg27119 vs. Swiss-Prot
Match: sp|A6Q582|RF2_NITSB (Peptide chain release factor 2 OS=Nitratiruptor sp. (strain SB155-2) OX=387092 GN=prfB PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12
Identity = 34/68 (50.00%), Postives = 51/68 (75.00%), Query Frame = 0 

Query: 66  LILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASA 125
           +++ D+++     +DT++ASG GGQH NK +SA+R+ HIPTGI  Q   DRSQHKNRA+A
Sbjct: 231 IVIEDKDI----RVDTYRASGAGGQHVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATA 290

Query: 126 LARLRAQL 134
           +  L+++L
Sbjct: 291 MKMLKSRL 294

[Close]
BLAST of Carg27119 vs. Swiss-Prot
Match: sp|B1M766|RF1_METRJ (Peptide chain release factor 1 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831 / NBRC 15690 / NCIMB 10815 / 0-1) OX=426355 GN=prfA PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 0 

Query: 78  EMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKV 137
           ++DT +A G GGQH NK ESA+R+ H+PTGI     E+RSQHKNRA A+A LRA+L    
Sbjct: 224 KIDTMRAQGAGGQHVNKTESAIRITHLPTGIVVFVQEERSQHKNRARAMALLRARLYEAE 283

Query: 138 RNPVD 143
           RN  D
Sbjct: 284 RNAKD 288

[Close]
BLAST of Carg27119 vs. TrEMBL
Match: tr|A0A1S3CAA2|A0A1S3CAA2_CUCME (uncharacterized protein LOC103498609 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498609 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 7.9e-107
Identity = 203/240 (84.58%), Postives = 214/240 (89.17%), Query Frame = 0 

Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRI--HQFEGS-FFSNSLRSNCSSSSAN 60
           MA ANMLW SAKIL  P PIASN RW R G  FR   H FEGS FF NSLR NCSSS+AN
Sbjct: 1   MANANMLWNSAKILGFPAPIASNVRWARFGYKFRFRHHPFEGSFFFFNSLRFNCSSSNAN 60

Query: 61  SIWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRS 120
           S+  GKEYL+LSDEELM+QCEM TFKASGPGGQHRNKRESAVRLKHIPTGI AQAVEDRS
Sbjct: 61  SVCSGKEYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRS 120

Query: 121 QHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSK 180
           QHKNR+SALARLRA LALKVRNPVDLEDYSPPPELLQILP KST+RPP CGPQIGPNNSK
Sbjct: 121 QHKNRSSALARLRALLALKVRNPVDLEDYSPPPELLQILPPKSTVRPPECGPQIGPNNSK 180

Query: 181 FLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           FLPGMQALLDLI TLDGS+SDTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKGMKPLK
Sbjct: 181 FLPGMQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGMKPLK 240

[Close]
BLAST of Carg27119 vs. TrEMBL
Match: tr|A0A0A0KUM8|A0A0A0KUM8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646680 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 5.1e-106
Identity = 201/240 (83.75%), Postives = 215/240 (89.58%), Query Frame = 0 

Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQ--FEGS-FFSNSLRSNCSSSSAN 60
           MA ANMLW SAKIL  P PIASN RW R   TFR+    FEGS FF NSLR NCSSS+AN
Sbjct: 1   MANANMLWSSAKILGFPSPIASNVRWARFDYTFRLRHRPFEGSFFFFNSLRFNCSSSNAN 60

Query: 61  SIWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRS 120
           S+  GK+YL+LSDEELM+QCEM TFKASGPGGQHRNKRESAVRLKHIPTGI AQAVEDRS
Sbjct: 61  SVCNGKQYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRS 120

Query: 121 QHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSK 180
           QHKNR+SALARLRA LALKVRNPVDLEDYSPPPELLQILPLKST+RPP CGPQIGPNNSK
Sbjct: 121 QHKNRSSALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTVRPPECGPQIGPNNSK 180

Query: 181 FLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           FLPGMQALLDLI TLDGS+SDTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKG+KPLK
Sbjct: 181 FLPGMQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGLKPLK 240

[Close]
BLAST of Carg27119 vs. TrEMBL
Match: tr|A0A1S3CAT7|A0A1S3CAT7_CUCME (uncharacterized protein LOC103498609 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498609 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.8e-95
Identity = 186/237 (78.48%), Postives = 197/237 (83.12%), Query Frame = 0 

Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSNCSSSSANSIW 60
           MA ANMLW SAKIL  P PIASN RW                         SSS+ANS+ 
Sbjct: 1   MANANMLWNSAKILGFPAPIASNVRW------------------------ASSSNANSVC 60

Query: 61  KGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK 120
            GKEYL+LSDEELM+QCEM TFKASGPGGQHRNKRESAVRLKHIPTGI AQAVEDRSQHK
Sbjct: 61  SGKEYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHK 120

Query: 121 NRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP 180
           NR+SALARLRA LALKVRNPVDLEDYSPPPELLQILP KST+RPP CGPQIGPNNSKFLP
Sbjct: 121 NRSSALARLRALLALKVRNPVDLEDYSPPPELLQILPPKSTVRPPECGPQIGPNNSKFLP 180

Query: 181 GMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           GMQALLDLI TLDGS+SDTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKGMKPLK
Sbjct: 181 GMQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGMKPLK 213

[Close]
BLAST of Carg27119 vs. TrEMBL
Match: tr|A0A1U8GMF3|A0A1U8GMF3_CAPAN (peptide chain release factor 1 isoform X3 OS=Capsicum annuum OX=4072 GN=LOC107867946 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 8.8e-74
Identity = 148/203 (72.91%), Postives = 172/203 (84.73%), Query Frame = 0 

Query: 37  QFE--GSFFSNSLRSNCSSSSANSIWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNK 96
           QFE  GS   ++   N S+ S ++   GKEYL++SDEELMRQCEM TFKASGPGGQHRNK
Sbjct: 49  QFEEFGSAKYSTSAFNKSNGSVDTGTGGKEYLLMSDEELMRQCEMSTFKASGPGGQHRNK 108

Query: 97  RESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQ 156
           RESAVRLKH PTGI +QAVEDRSQH NRASAL+RLRA LALKVRN +DLE Y+PP ELLQ
Sbjct: 109 RESAVRLKHNPTGIVSQAVEDRSQHMNRASALSRLRALLALKVRNNLDLETYTPPQELLQ 168

Query: 157 ILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLI 216
           ILP KSTIR   CGPQIGPNNSKF+ GMQALLDL++ ++GS+SD AK +GL+TGA+SRL+
Sbjct: 169 ILPAKSTIRGSNCGPQIGPNNSKFVLGMQALLDLLFAVEGSVSDAAKKLGLSTGALSRLL 228

Query: 217 LSDDSLRMAVNDIRISKGMKPLK 238
           LSDD+LRMAVN+ R+SKGMKPLK
Sbjct: 229 LSDDNLRMAVNEFRVSKGMKPLK 251

[Close]
BLAST of Carg27119 vs. TrEMBL
Match: tr|A0A199VA37|A0A199VA37_ANACO (Peptide chain release factor 2 OS=Ananas comosus OX=4615 GN=ACMD2_01298 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.4e-73
Identity = 144/194 (74.23%), Postives = 164/194 (84.54%), Query Frame = 0 

Query: 44  SNSLRSNCSSSSANSIWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKH 103
           S S     +SSS++S +KG  YL L+DEEL+ QCEMDT+KASGPGGQHRNKRESAVRLKH
Sbjct: 28  SRSQTLTLASSSSSSTYKGGNYLTLTDEELVAQCEMDTYKASGPGGQHRNKRESAVRLKH 87

Query: 104 IPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIR 163
           +PTG+ AQAVEDRSQHKNRASALARLR  LALKVRN VDL  Y+PPPELLQILP KSTIR
Sbjct: 88  LPTGVVAQAVEDRSQHKNRASALARLRTLLALKVRNAVDLNGYTPPPELLQILPAKSTIR 147

Query: 164 PPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMA 223
               GPQIGPNN KF  GMQALLDLIY ++GS+S+ A  +GL+TGA+SRLILSDDSLRMA
Sbjct: 148 GSDVGPQIGPNNPKFAMGMQALLDLIYAVEGSVSEAANLLGLSTGALSRLILSDDSLRMA 207

Query: 224 VNDIRISKGMKPLK 238
           VN++R SKGM+PLK
Sbjct: 208 VNELRASKGMRPLK 221

The following BLAST results are available for this feature:
BLAST of Carg27119 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023523846.11.7e-12999.16uncharacterized protein LOC111787964 [Cucurbita pepo subsp. pepo][more]
XP_022932469.16.5e-12999.16uncharacterized protein LOC111438876 [Cucurbita moschata][more]
XP_022973451.13.6e-12797.89uncharacterized protein LOC111471993 [Cucurbita maxima][more]
XP_008459491.11.2e-10684.58PREDICTED: uncharacterized protein LOC103498609 isoform X1 [Cucumis melo][more]
XP_004141513.17.8e-10683.75PREDICTED: uncharacterized protein LOC101217430 [Cucumis sativus] >KGN52594.1 hy... [more]
BLAST of Carg27119 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G33330.13.0e-6758.26Class I peptide chain release factor[more]
AT1G56350.13.9e-1145.83Peptide chain release factor 2[more]
AT2G47020.12.8e-0950.91Peptide chain release factor 1[more]
AT5G36170.12.4e-0852.94high chlorophyll fluorescent 109[more]
AT3G62910.18.5e-0641.54Peptide chain release factor 1[more]
BLAST of Carg27119 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A7ZE19|RF2_CAMC16.9e-1357.63Peptide chain release factor 2 OS=Campylobacter concisus (strain 13826) OX=36010... [more]
sp|B1XYX1|RF1_LEPCP9.0e-1347.44Peptide chain release factor 1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG ... [more]
sp|A5WFG1|RF1_PSYWF1.2e-1255.88Peptide chain release factor 1 OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN... [more]
sp|A6Q582|RF2_NITSB1.2e-1250.00Peptide chain release factor 2 OS=Nitratiruptor sp. (strain SB155-2) OX=387092 G... [more]
sp|B1M766|RF1_METRJ1.5e-1256.92Peptide chain release factor 1 OS=Methylobacterium radiotolerans (strain ATCC 27... [more]
BLAST of Carg27119 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CAA2|A0A1S3CAA2_CUCME7.9e-10784.58uncharacterized protein LOC103498609 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0KUM8|A0A0A0KUM8_CUCSA5.1e-10683.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646680 PE=4 SV=1[more]
tr|A0A1S3CAT7|A0A1S3CAT7_CUCME1.8e-9578.48uncharacterized protein LOC103498609 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1U8GMF3|A0A1U8GMF3_CAPAN8.8e-7472.91peptide chain release factor 1 isoform X3 OS=Capsicum annuum OX=4072 GN=LOC10786... [more]
tr|A0A199VA37|A0A199VA37_ANACO3.4e-7374.23Peptide chain release factor 2 OS=Ananas comosus OX=4615 GN=ACMD2_01298 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
Vocabulary: Molecular Function
TermDefinition
GO:0003747translation release factor activity
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I_II
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051083 'de novo' cotranslational protein folding
biological_process GO:0006449 regulation of translational termination
biological_process GO:0006415 translational termination
cellular_component GO:0005840 ribosome
cellular_component GO:0018444 translation release factor complex
molecular_function GO:0003747 translation release factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27119-RACarg27119-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000352Peptide chain release factor class I/class IIPFAMPF00472RF-1coord: 76..134
e-value: 4.2E-20
score: 71.7
NoneNo IPR availableGENE3DG3DSA:3.30.160.20coord: 74..138
e-value: 1.1E-25
score: 90.9
NoneNo IPR availablePANTHERPTHR43804FAMILY NOT NAMEDcoord: 51..237
NoneNo IPR availablePANTHERPTHR43804:SF6CLASS I PEPTIDE CHAIN RELEASE FACTORcoord: 51..237
NoneNo IPR availableSUPERFAMILYSSF75620Release factorcoord: 76..136

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg27119Cla012365Watermelon (97103) v1carwmB0607
Carg27119ClCG08G001950Watermelon (Charleston Gray)carwcgB0592
Carg27119CmaCh01G008910Cucurbita maxima (Rimu)carcmaB0855
Carg27119CmoCh01G009360Cucurbita moschata (Rifu)carcmoB0832
Carg27119Lsi08G001920Bottle gourd (USVL1VR-Ls)carlsiB555
Carg27119Cp4.1LG02g09700Cucurbita pepo (Zucchini)carcpeB0865
Carg27119Cla97C08G146020Watermelon (97103) v2carwmbB0635
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg27119Cucurbita moschata (Rifu)carcmoB0831