CmoCh01G009360 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G009360
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Peptide chain release factor 2
Location	Cmo_Chr01 : 5419814 .. 5425029 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTGTCTCTCAATAAATTTCAACCTTTGGGAGTTGGGGCCGATTTCTAACTATTTATGTACTAATTTCCGTTATCAGGGTGTTTCTCGCCCAAATTCTGCAGTTCTTTCATTTTGATCGAAAACCCACACAGGAGCTGCAACAGGCAAAATCGGGAGTCCATAGCAGCATATCTCATAGCAGGAAGCCATGATTTTCCATAACAATGACTTCAAGCCACAACTTGTCCATAACCATGATTAAAAACGACCCAATTTTGAAAACCACACAAAACCCAATAGGAGAAATTCGTTTTCTGAATTGCGAAAATGGCAACCGCAAATATGCTCTGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCAATTCGAGGGCTCTTTCTTCTCCAACTCACTGCGTTCCACTTGCAGCTCTAGCAGTGCAAATTCAGTATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGATGAGACAGTGCGAAATGGACACGTTTAAGGCCTCAGGTCCCGGCGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCTCAGGTTTATATTTGTCTGATAAATATAATCAAGTTCAATTATATACTTCAGCTTCTTAGCTCTCAAGTTAATCTTTGGCCCTTTATTTCCAAGGCTGTCGAGGATCGATCACAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGGTGGCTGGATTGTACATGCTTGTTTGTTTTTTAATTTCATTTTCCGTAAGGTTGGTTCTCCTGATGAATGATATATGCCATGCGTTGTTGTATTGAGCTCAGTCAGGAACCCTGTGGATCTTGAAGATTATTCGCCTCCTCCAGAGCTTCTCCAAATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGTTTCTCTCTATTCTCTTTCTGTCTATATTTCTGTGTACATATGGGTGTGTGTTTATAATTTGATTTTCTTGATATAAGAGAAGGATATGAAGGTGATAACCCAAATTACCTGTTTGGCAGGGCATGCAAGCTTTATTGGATCTAATTTACACACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTATGTTTGCTATTCATTCATGTGTTGGCCTTTGTTTCTTATTATTTTATTTCCACCATAACTAAGCATCCACAGTCGAATGTAGAGAATGGGAGTTGTTCAATTCTGTGAGGAGATTGGGATTTTATCAAGAAACTGAGAGAGCTGATGTATGGACGTTTGTGGTTGATAGGAAGATGAGTGGAAGGGAGTTCATTGCGAGGTTTATGATTTTTATAGGAATGAACAAGAATGATAATTTTATCAAGGGCATGAGGGAAAGGAGTTTAGACCTCCGGAAGGTGTTGGAGGATATTTTTCTTACGAAGTGTCTTGTTGGAGGCAAAGTCTTGCCTTATGATTTGATGTAATAGCTCAATCCCACTGCTAGCAGATATTGTCCTCTTTGAGCTTTTCCTTTTAGGTTTTCCCTCAAGGTTTTTAAAACGCATATGCTAGGGAGAGATTTCCACACCCTTACAAAATTTGTTTTTGTTCTCCTCGCCTAGTAAGGAAGTGGACCAAATTTGGTTTTTGAGAGAGCTTTTGAGTTTGATTACTGGTTCTGATGGTTGTTCATCATTTTCTATTAACATACTTCGGATTATATTAAAACTAATTGAGAGTTATTTGTGAGTTTGACAAGGTAGATGTCAACTTGACCAACGATGAAAATTATATTCATTTCATACCCAAAGGACTTAACTTATTGGAATAGCAACTGTAGAACAATTAATCCTTATTTTATGGGAATGTCAGCTTGTTTATGTATTGAATATTTTCTCATTGACATTCCATGAGCGAATAAATCACATAATAGTTACAAAAATTTGGCACTATTTTTGGCTGTCAACATAGATGATATTAAAAGATGATCCGTAGTTAAGATATAAACCTGGTTTCCACTATTTCAAAAAGAGATAAAAGTGTGACAGTGTTAATATTAATAGCAAAGTGATAGATATGTACGAGACATTAAGCATAAGTAGTCCGATTAATTGATGCAGGTGGAACAGTTGAATTACAATTTAGATAAATAGTTAAAAGATAAATCTTATGTTTCCCGTTTCTAATATGTTAATGATATAGATTAGCTGCACGCTAATAGTTCTATTAATTTTGAATATTTTAGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGTAACACCATCCTATTTTTGAGAAACTATGTCGCATCTCTGCATAATTATTTAATTTCCTTTTATGAAAGTTGGTTTCTTATCGAAAACATTATTTCTTTACTAAATTGTGCTTGAGAAGTCAAATTCTTGGAATATTTAGTGTGTTCATGTTCCTTCCGATTTATCGGATGTTCCCGAAGGGACAATCTGTTTTCATGTTTTGAAATGTTAACGGTAAATGTCAGCTTGTTGAGAGAGCCAGCTTGGTAATTTTAATTTGTAAGCATCATAATACATAGCTAATTAATTATGTGGCATCCACTTCAAAACTCAATATAGAAGTGGTAACTTATTTTGCTTCTGTAAGTCGTCCTGCATCTCTGGTTCTAACCCTACATGCCAGACTAGAGAAAGGTGGTAGTTGTCTTTTGCAAAACTTTTGGCTGCTTGGCTCAAATTAAATGTCTACAGGTGTTATTGTTCTATTAGTATAGTTATATTTTCCGTAAATATATTAGTTGTCTCGTCCTTTTTTGTCTTTTTACTTTCTCCGACTTTGGGTAACCTCGTATATAAATCTCTTTAGTGAATGGAATAGAATATTCTAATTCGATCGAACTTTTAGCATTTACATGATATCAGAGAATTACATCAATTAGTTACTAAAAGAATCTAAGCCAAAAGGACTTTAGACCCCCCATGCTCTCCACTCTCTCCTCCTTTCCAACCCCAATCCTTCATTATTCAAGATAAGTTTCTTCATCTCATTTAGCTATTTTTAAGATCAGTTTGTAAGTATGGTGTTGAGTAGTACTTCTGCCATGAAAGAGAGAAGTTGTTGTGTCAATAATAAGTACTTCACAGCCTATGGTTCAAAGATAAGTTTTTTATCAAAGAATGAAGAGCAATTTGTCTATACATACCCTTATCCCATCTTTGTTGGTTTGAAAGTTCACTTGATGATCTTTTGCAACTTCTGATGTCGATGCATTTCTTAAAACAATTCCGAGACAGCAGTGGTACAATCTGTCAGTTGAAACTTTGAGTGCATTATCTGGCCTCCTTCTGGAGGAAGAAAGGATGACTTATTTTCTAGGAGATGATTAAGGACTTTCATGTGTATTATGAAGTTAGCATCAATATTTCGAATCAGACAGCAGCTAAAAAAATCAAGTCTCCTACCAATAGATATGCATGTGTTGCGATGAAGTTCTCATACGGAAAGCAAACAATAAAGCTGGCTCTAAACTGTAACTAGCTTCTACAAGATCTTCACCTCTTTGTGGGAATGAATTTTTGGTTGCAAAAGAAAAGGAAGTGGCTAGTGTTGATTGGAGTTCTTTTATGGTAATATCACGTTTAAATCCCCATGATGATTGAAATGATATCAAAAAGGCAATTGAAAAAAAAGAAAAGAAAAAATAGGCTACTTTTGTGATAAATCCGTAAATGGCTGATGAGGCTCTTTGCAAATGGAAGATGGCATGCGTTTAGGTGGTTCTTGGGACATAAGGAAAATTGATGAATTGAAATCCTTTTCATATCAAGTTTGAATATTGGTCTTTCAAGAAGGATAGGAAGTCAGAATTTAGGGTGGGTTATGGATGAACTTTCATGATACCAATTGATAATTCGGTGACAATTCATGATAATAGTCGAAAGGTTGATTCCCAAACACTACTCATTGTGCTATTAGTAACCTTCCCACTTATTCTCTCTCTCTCTCTCTCTGTTCATTATTCCAAGCAAAGTGTACAAAATAGTAGAGAGGCTCGACAAGAAACTTCTCTGACAAGGGAGCAAACTGGGTTGAGTTTTCACCTTGTTATATGGGATAAGCTTCTCCATCCCATTGAAAAATGTCGTCTAGGGTCGTTTCCCTTTGAAGGAAAAGAACAAAGCTTGGACAGCAAAGTGGACTTAGAGATATTATCATGAGAGATGCCCTATGGAGGAAGCTTATATGGTGTAAATATGGGACACTCTCTGCCGCTCCCCATCCATCGACCATTTCTGCAACAAGACCATGGCAAGCCTTGAAAAGGCAGAAATATTTTGTTGCTAGTTGTATTCGCCACCTTGTAGGCGACAAGGCCCATACTTTGTTTGGGAACGACCTTTGGTTATCGAATATAAGATTGGCTAGCAAGTTTCCTCCTCTATAGACTCGCTAGGCGAAAATTGATTACTGTAAAGGAGACCTGAGAACCGGACAGAAGCCTTTGGAACCTTCACTTTGGTAGAAATCTGAAAGATGAAAATGCTTGTGAATGGCCGGAATTGATTAATATGCAGCAGCAGTTTTCTCTTTTTGTTGGCAATGAATGGGCAACCCAAATGGGTTTTATACATCAAAATCTCTCTGTTGACATATTTTTCATATTTTTGAATAGGGTATCATGAATTTATAATGAATTTTGAAATTTACAGGGTATGAAGCCACTGAAGTAGAAAAGGGGAAGCTCAAGGACTGTATCGGGTGGTGGGTACTCCATGAAGCAACTTCATTTCCGGAGATTCATCGTTGAGTTGAGTTAAAAAGATGTAAGTTTCTTGTATTTATATTGATATTAGATGCGATTTGATGATAACGAGGAAATATGAAATTTTTATGAGAGGACAAAGATGGTGTATGTAATTAAAGCATCAATCAATCTCTGCCGAAACACATTCCTATTACTACACACTATCTTAAAGTGTGGAGAAAACTCCTGTTTCTTGCAAATCTCAAGTTTTTGGTGCTTTCCAGACATGGAACATTCATTTTTTTTACCAAGTTTATAGATTATTATCCTGAACATTCAATTCA

mRNA sequence

TTATTGTCTCTCAATAAATTTCAACCTTTGGGAGTTGGGGCCGATTTCTAACTATTTATGTACTAATTTCCGTTATCAGGGTGTTTCTCGCCCAAATTCTGCAGTTCTTTCATTTTGATCGAAAACCCACACAGGAGCTGCAACAGGCAAAATCGGGAGTCCATAGCAGCATATCTCATAGCAGGAAGCCATGATTTTCCATAACAATGACTTCAAGCCACAACTTGTCCATAACCATGATTAAAAACGACCCAATTTTGAAAACCACACAAAACCCAATAGGAGAAATTCGTTTTCTGAATTGCGAAAATGGCAACCGCAAATATGCTCTGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCAATTCGAGGGCTCTTTCTTCTCCAACTCACTGCGTTCCACTTGCAGCTCTAGCAGTGCAAATTCAGTATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGATGAGACAGTGCGAAATGGACACGTTTAAGGCCTCAGGTCCCGGCGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCTCAGGCTGTCGAGGATCGATCACAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGTCAGGAACCCTGTGGATCTTGAAGATTATTCGCCTCCTCCAGAGCTTCTCCAAATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGGCATGCAAGCTTTATTGGATCTAATTTACACACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGGTATGAAGCCACTGAAGTAGAAAAGGGGAAGCTCAAGGACTGTATCGGGTGGTGGGTACTCCATGAAGCAACTTCATTTCCGGAGATTCATCGTTGAGTTGAGTTAAAAAGATGTAAGTTTCTTGTATTTATATTGATATTAGATGCGATTTGATGATAACGAGGAAATATGAAATTTTTATGAGAGGACAAAGATGGTGTATGTAATTAAAGCATCAATCAATCTCTGCCGAAACACATTCCTATTACTACACACTATCTTAAAGTGTGGAGAAAACTCCTGTTTCTTGCAAATCTCAAGTTTTTGGTGCTTTCCAGACATGGAACATTCATTTTTTTTACCAAGTTTATAGATTATTATCCTGAACATTCAATTCA

Coding sequence (CDS)

ATGGCAACCGCAAATATGCTCTGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCAATTCGAGGGCTCTTTCTTCTCCAACTCACTGCGTTCCACTTGCAGCTCTAGCAGTGCAAATTCAGTATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGATGAGACAGTGCGAAATGGACACGTTTAAGGCCTCAGGTCCCGGCGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCTCAGGCTGTCGAGGATCGATCACAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGTCAGGAACCCTGTGGATCTTGAAGATTATTCGCCTCCTCCAGAGCTTCTCCAAATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGGCATGCAAGCTTTATTGGATCTAATTTACACACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGGTATGAAGCCACTGAAGTAG

Homology

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BLAST of CmoCh01G009360 vs. Swiss-Prot
Match: RF2_NITSB (Peptide chain release factor 2 OS=Nitratiruptor sp. (strain SB155-2) GN=prfB PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-13
Identity = 48/127 (37.80%), Postives = 72/127 (56.69%), Query Frame = 1


Query: 9   KSAKILSIPVPIASNGRWGRIGCTFRIHQFE--GSFFSNSLRSTCSSSSANSVWKGKEYL 68
           + A I  +   I     +G +     IH+      F SN+ R T  +S   S     +  
Sbjct: 171 EEAGIKDVSFIIKGENAYGYLKAENGIHRLVRISPFDSNARRHTSFASVMVSPEVDDDIN 230

Query: 69  ILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASAL 128
           I+ +++ +R   +DT++ASG GGQH NK +SA+R+ HIPTGI  Q   DRSQHKNRA+A+
Sbjct: 231 IVIEDKDIR---VDTYRASGAGGQHVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATAM 290

Query: 129 ARLRAQL 134
             L+++L
Sbjct: 291 KMLKSRL 294

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BLAST of CmoCh01G009360 vs. Swiss-Prot
Match: RF2_CAMC1 (Peptide chain release factor 2 OS=Campylobacter concisus (strain 13826) GN=prfB PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.8e-13
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1


Query: 75  RQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL 134
           +  ++DT++ASG GGQH NK ESA+R+ HIPTGI  Q   DRSQHKNRA+A+  L+++L
Sbjct: 236 KDLKIDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRL 294

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BLAST of CmoCh01G009360 vs. Swiss-Prot
Match: RF1_LEPCP (Peptide chain release factor 1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=prfA PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.8e-13
Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 1


Query: 76  QCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLAL 135
           +  +DT++ASG GGQH NK +SAVR+ H+PTG+ A+  +DRSQH+N+A ALA L A+L  
Sbjct: 221 ELRIDTYRASGAGGQHINKTDSAVRVTHLPTGLVAECQDDRSQHRNKARALAVLAARLRD 280

Query: 136 KVRNPVDLEDYSPPPELL 154
           +VR     +D +    L+
Sbjct: 281 RVRQEQAAKDAAARKSLI 298

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BLAST of CmoCh01G009360 vs. Swiss-Prot
Match: RF1_PSYWF (Peptide chain release factor 1 OS=Psychrobacter sp. (strain PRwf-1) GN=prfA PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 1


Query: 79  MDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL-ALKV 138
           MDTF++SG GGQH N  +SAVRL HIPTG+ A+  ++RSQHKNRA A+  L A++   KV
Sbjct: 227 MDTFRSSGAGGQHVNTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKV 286

Query: 139 RNPVDLED 146
           +  VD  D
Sbjct: 287 QEQVDTAD 294

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BLAST of CmoCh01G009360 vs. Swiss-Prot
Match: RF2_SULDN (Peptide chain release factor 2 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=prfB PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 1


Query: 11  AKILSIPVPIASNGRWGRIGCTFRIHQFE--GSFFSNSLRSTCSSSSANSVWKGKEYLIL 70
           A I  + + I+    +G +     IH+      F SN+ R T  SS   S     +  I+
Sbjct: 173 AGIKDVSLLISGENAYGYLKVENGIHRLVRISPFDSNAKRHTSFSSVMVSPEVDDDINIV 232

Query: 71  SDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALAR 130
            ++   R   +DT+++SG GGQH NK ESA+R+ HI TG+  Q   DRSQHKNRA+A+  
Sbjct: 233 IED---RDIRVDTYRSSGAGGQHVNKTESAIRITHIATGVVVQCQNDRSQHKNRATAMKM 292

Query: 131 LRAQL 134
           L+++L
Sbjct: 293 LKSRL 294

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BLAST of CmoCh01G009360 vs. TrEMBL
Match: A0A0A0KUM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646680 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 8.1e-106
Identity = 201/240 (83.75%), Postives = 214/240 (89.17%), Query Frame = 1


Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQ--FEGSFFS-NSLRSTCSSSSAN 60
           MA ANMLW SAKIL  P PIASN RW R   TFR+    FEGSFF  NSLR  CSSS+AN
Sbjct: 1   MANANMLWSSAKILGFPSPIASNVRWARFDYTFRLRHRPFEGSFFFFNSLRFNCSSSNAN 60

Query: 61  SVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRS 120
           SV  GK+YL+LSDEELM+QCEM TFKASGPGGQHRNKRESAVRLKHIPTGI AQAVEDRS
Sbjct: 61  SVCNGKQYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRS 120

Query: 121 QHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSK 180
           QHKNR+SALARLRA LALKVRNPVDLEDYSPPPELLQILPLKST+RPP CGPQIGPNNSK
Sbjct: 121 QHKNRSSALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTVRPPECGPQIGPNNSK 180

Query: 181 FLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           FLPGMQALLDLI TLDGS+SDTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKG+KPLK
Sbjct: 181 FLPGMQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGLKPLK 240

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BLAST of CmoCh01G009360 vs. TrEMBL
Match: W9R2G7_9ROSA (Peptide chain release factor 2 OS=Morus notabilis GN=L484_025852 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72
Identity = 142/176 (80.68%), Postives = 155/176 (88.07%), Query Frame = 1


Query: 62  GKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKN 121
           GK +L LSDEEL+RQCEMDTFKASGPGGQHRNKRESAVRLKH+PTG+ AQAVEDRSQH N
Sbjct: 77  GKGFLELSDEELLRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGVIAQAVEDRSQHMN 136

Query: 122 RASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPG 181
           RASAL RLR  LALKVRN VDLE YSPP ELLQILP KSTIR   CGPQIGP N KF+ G
Sbjct: 137 RASALTRLRTLLALKVRNAVDLEAYSPPKELLQILPPKSTIRGSDCGPQIGPKNPKFVLG 196

Query: 182 MQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           MQALLDLI+ + GS+SD AKY+GL+TGA+SRLILSDDSLRMAVN++R SKGMKPLK
Sbjct: 197 MQALLDLIFAVGGSVSDAAKYLGLSTGALSRLILSDDSLRMAVNELRASKGMKPLK 252

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BLAST of CmoCh01G009360 vs. TrEMBL
Match: A0A059BTR1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02930 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.0e-72
Identity = 146/196 (74.49%), Postives = 165/196 (84.18%), Query Frame = 1


Query: 42  FFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRL 101
           F+SN      ++SS+ S   G  YL L+DEELMRQCEM TFK+SGPGGQHRNKRESAVRL
Sbjct: 83  FYSNG----GAASSSYSGGSGSSYLELTDEELMRQCEMSTFKSSGPGGQHRNKRESAVRL 142

Query: 102 KHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKST 161
           KHIPTGI AQAVEDRSQHKNRASAL RLR  LALKVRN VDLE YSPP ELLQILPLKST
Sbjct: 143 KHIPTGIIAQAVEDRSQHKNRASALLRLRTLLALKVRNAVDLEAYSPPKELLQILPLKST 202

Query: 162 IRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLR 221
           +R   CGPQIGPNN KF+ G+QALLDL+  L+GS+S+ AK +GL+TGA+SRLILSDDSLR
Sbjct: 203 VRGSDCGPQIGPNNPKFMLGVQALLDLLSALEGSVSEVAKLLGLSTGALSRLILSDDSLR 262

Query: 222 MAVNDIRISKGMKPLK 238
           +AVN++R SKGMKPLK
Sbjct: 263 LAVNELRASKGMKPLK 274

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BLAST of CmoCh01G009360 vs. TrEMBL
Match: D7SMS6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0089g01340 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.4e-72
Identity = 143/195 (73.33%), Postives = 165/195 (84.62%), Query Frame = 1


Query: 43  FSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLK 102
           F  S R + SS +++S    +E+L LSDE+LM+QCEM TFK+SGPGGQHRNKRESAVRLK
Sbjct: 30  FGMSCRMSFSSENSSSGSGSREFLGLSDEQLMKQCEMSTFKSSGPGGQHRNKRESAVRLK 89

Query: 103 HIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTI 162
           H+PTGI AQAVEDRSQHKNRASALARLR  LALKVRN +DL+ YSPP ELLQILP KSTI
Sbjct: 90  HLPTGIIAQAVEDRSQHKNRASALARLRTLLALKVRNSIDLDTYSPPLELLQILPAKSTI 149

Query: 163 RPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRM 222
           R   CGPQIGPNN KF  GM ALLDLI+ ++GSISD AK +GL+TGA+SRL+LSDDSLRM
Sbjct: 150 RTSDCGPQIGPNNPKFALGMLALLDLIFAVEGSISDAAKLMGLSTGALSRLVLSDDSLRM 209

Query: 223 AVNDIRISKGMKPLK 238
           AVN++R SKG+KPLK
Sbjct: 210 AVNELRTSKGLKPLK 224

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BLAST of CmoCh01G009360 vs. TrEMBL
Match: K4D711_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 7.7e-72
Identity = 145/215 (67.44%), Postives = 173/215 (80.47%), Query Frame = 1


Query: 28  RIGCTFRI---HQFE--GSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTF 87
           RIG  F +    QF+  GS FS    ST      ++   G++YL++SDEELM+QCE+ TF
Sbjct: 43  RIGSLFSVPVGEQFQEFGSLFSAKY-STNGDGCVDTGIGGRDYLLMSDEELMKQCELSTF 102

Query: 88  KASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVD 147
           KASGPGGQHRNKRESAVRLKH PTGI AQAVEDRSQH NRASAL+RLRA LALKVRN +D
Sbjct: 103 KASGPGGQHRNKRESAVRLKHSPTGIIAQAVEDRSQHMNRASALSRLRALLALKVRNNID 162

Query: 148 LEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKY 207
           L+ Y+PP ELLQILP KST+R   CGPQIGPNN KF  GMQALLDL++ ++GS+SD AK 
Sbjct: 163 LDTYTPPQELLQILPAKSTVRGSNCGPQIGPNNPKFALGMQALLDLLFAVEGSVSDAAKK 222

Query: 208 IGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           +GL+TGA+SRL+LSDD+LRMAVN+ R+SKG+KPLK
Sbjct: 223 LGLSTGALSRLLLSDDNLRMAVNEFRVSKGIKPLK 256

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BLAST of CmoCh01G009360 vs. TAIR10
Match: AT1G33330.1 (AT1G33330.1 Class I peptide chain release factor)

HSP 1 Score: 252.3 bits (643), Expect = 3.0e-67
Identity = 130/185 (70.27%), Postives = 151/185 (81.62%), Query Frame = 1


Query: 53  SSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQA 112
           S S  S  +   YL  +DEELM+QC ++TF+ SGPGGQHRNKR+SAVRLKH+PTGI AQA
Sbjct: 74  SVSVVSDVQSPNYLKFTDEELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQA 133

Query: 113 VEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIG 172
           VEDRSQHKNRASAL RLR  LA+KVRN VD+E Y+PPPELLQILP KSTIR    G QIG
Sbjct: 134 VEDRSQHKNRASALNRLRTLLAIKVRNKVDIEAYAPPPELLQILPPKSTIR-TSSGSQIG 193

Query: 173 PNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKG 232
           PNN KF+PGMQALLD+I   DGSI+D+AK +GL+TG +SRLILS D LRMAVN +R +KG
Sbjct: 194 PNNPKFVPGMQALLDVISASDGSIADSAKLLGLSTGGLSRLILSHDGLRMAVNSMRAAKG 253

Query: 233 MKPLK 238
           +KPLK
Sbjct: 254 IKPLK 257

[Close]

BLAST of CmoCh01G009360 vs. TAIR10
Match: AT1G56350.1 (AT1G56350.1 Peptide chain release factor 2)

HSP 1 Score: 65.9 bits (159), Expect = 3.9e-11
Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = 1


Query: 62  GKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKN 121
           G   + ++D +L     ++ F++ G GGQH N  +SAVR+ HIPTGITA    +RSQH N
Sbjct: 337 GSTRVEINDSDL----RIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSN 396

Query: 122 RASALARLRAQL 134
           +ASA+A L+++L
Sbjct: 397 KASAMAVLQSRL 404

[Close]

BLAST of CmoCh01G009360 vs. TAIR10
Match: AT2G47020.1 (AT2G47020.1 Peptide chain release factor 1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-09
Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 1


Query: 79  MDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL 134
           +DT+++ G GGQH N   SAVR+ H+PTG+     ++RSQH NRA AL  L A+L
Sbjct: 276 IDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARL 330

[Close]

BLAST of CmoCh01G009360 vs. TAIR10
Match: AT5G36170.1 (AT5G36170.1 high chlorophyll fluorescent 109)

HSP 1 Score: 58.9 bits (141), Expect = 4.8e-09
Identity = 45/133 (33.83%), Postives = 64/133 (48.12%), Query Frame = 1


Query: 9   KSAKILSIPVPIASNGRWGRIGCTFRIHQF--EGSFFSNSLRSTCSSSSANSVWKGKEYL 68
           + A I S  + I     +G I      H+   +  F S  LR T  S        G E +
Sbjct: 251 EEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFS--------GVEVM 310

Query: 69  ILSDEELM------RQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK 128
            L  EE +         ++   +A G GGQ+ NK E+AVR+ HIPTG+  +  E+RSQ  
Sbjct: 311 PLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLA 370

Query: 129 NRASALARLRAQL 134
           N+  AL RL+A+L
Sbjct: 371 NKTRALIRLKAKL 375

[Close]

BLAST of CmoCh01G009360 vs. TAIR10
Match: AT3G62910.1 (AT3G62910.1 Peptide chain release factor 1)

HSP 1 Score: 48.1 bits (113), Expect = 8.5e-06
Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 1


Query: 75  RQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL- 134
           +  E+ + ++ G GGQ+ NK E+A+ L H P+GI     E+R+Q +N+A A   LRA+L 
Sbjct: 275 KDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLY 334

Query: 135 ALKVR 139
            +KVR
Sbjct: 335 EIKVR 339

[Close]

BLAST of CmoCh01G009360 vs. NCBI nr
Match: gi|659119127|ref|XP_008459491.1| (PREDICTED: uncharacterized protein LOC103498609 isoform X1 [Cucumis melo])

HSP 1 Score: 394.0 bits (1011), Expect = 1.8e-106
Identity = 203/240 (84.58%), Postives = 213/240 (88.75%), Query Frame = 1


Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRI--HQFEGSFFS-NSLRSTCSSSSAN 60
           MA ANMLW SAKIL  P PIASN RW R G  FR   H FEGSFF  NSLR  CSSS+AN
Sbjct: 1   MANANMLWNSAKILGFPAPIASNVRWARFGYKFRFRHHPFEGSFFFFNSLRFNCSSSNAN 60

Query: 61  SVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRS 120
           SV  GKEYL+LSDEELM+QCEM TFKASGPGGQHRNKRESAVRLKHIPTGI AQAVEDRS
Sbjct: 61  SVCSGKEYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRS 120

Query: 121 QHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSK 180
           QHKNR+SALARLRA LALKVRNPVDLEDYSPPPELLQILP KST+RPP CGPQIGPNNSK
Sbjct: 121 QHKNRSSALARLRALLALKVRNPVDLEDYSPPPELLQILPPKSTVRPPECGPQIGPNNSK 180

Query: 181 FLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           FLPGMQALLDLI TLDGS+SDTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKGMKPLK
Sbjct: 181 FLPGMQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGMKPLK 240

[Close]

BLAST of CmoCh01G009360 vs. NCBI nr
Match: gi|449447515|ref|XP_004141513.1| (PREDICTED: uncharacterized protein LOC101217430 [Cucumis sativus])

HSP 1 Score: 391.3 bits (1004), Expect = 1.2e-105
Identity = 201/240 (83.75%), Postives = 214/240 (89.17%), Query Frame = 1


Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQ--FEGSFFS-NSLRSTCSSSSAN 60
           MA ANMLW SAKIL  P PIASN RW R   TFR+    FEGSFF  NSLR  CSSS+AN
Sbjct: 1   MANANMLWSSAKILGFPSPIASNVRWARFDYTFRLRHRPFEGSFFFFNSLRFNCSSSNAN 60

Query: 61  SVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRS 120
           SV  GK+YL+LSDEELM+QCEM TFKASGPGGQHRNKRESAVRLKHIPTGI AQAVEDRS
Sbjct: 61  SVCNGKQYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRS 120

Query: 121 QHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSK 180
           QHKNR+SALARLRA LALKVRNPVDLEDYSPPPELLQILPLKST+RPP CGPQIGPNNSK
Sbjct: 121 QHKNRSSALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTVRPPECGPQIGPNNSK 180

Query: 181 FLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           FLPGMQALLDLI TLDGS+SDTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKG+KPLK
Sbjct: 181 FLPGMQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGLKPLK 240

[Close]

BLAST of CmoCh01G009360 vs. NCBI nr
Match: gi|659119129|ref|XP_008459492.1| (PREDICTED: uncharacterized protein LOC103498609 isoform X2 [Cucumis melo])

HSP 1 Score: 358.2 bits (918), Expect = 1.1e-95
Identity = 187/237 (78.90%), Postives = 197/237 (83.12%), Query Frame = 1


Query: 1   MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVW 60
           MA ANMLW SAKIL  P PIASN RW                         SSS+ANSV 
Sbjct: 1   MANANMLWNSAKILGFPAPIASNVRWA------------------------SSSNANSVC 60

Query: 61  KGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK 120
            GKEYL+LSDEELM+QCEM TFKASGPGGQHRNKRESAVRLKHIPTGI AQAVEDRSQHK
Sbjct: 61  SGKEYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHK 120

Query: 121 NRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP 180
           NR+SALARLRA LALKVRNPVDLEDYSPPPELLQILP KST+RPP CGPQIGPNNSKFLP
Sbjct: 121 NRSSALARLRALLALKVRNPVDLEDYSPPPELLQILPPKSTVRPPECGPQIGPNNSKFLP 180

Query: 181 GMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           GMQALLDLI TLDGS+SDTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKGMKPLK
Sbjct: 181 GMQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGMKPLK 213

[Close]

BLAST of CmoCh01G009360 vs. NCBI nr
Match: gi|802573673|ref|XP_012068427.1| (PREDICTED: uncharacterized protein LOC105631043 [Jatropha curcas])

HSP 1 Score: 288.9 bits (738), Expect = 8.1e-75
Identity = 142/177 (80.23%), Postives = 159/177 (89.83%), Query Frame = 1


Query: 61  KGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHK 120
           +GK YL LSDEELMRQCEMDTFKASGPGGQHRNKRESAVR+KH+PTG+ +QAVEDRSQHK
Sbjct: 62  QGKRYLELSDEELMRQCEMDTFKASGPGGQHRNKRESAVRIKHLPTGVISQAVEDRSQHK 121

Query: 121 NRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLP 180
           NRASAL RLR  LALKVRN VDL  Y PPPELLQILPLKSTIR P CGPQIGPNN KF+ 
Sbjct: 122 NRASALRRLRTHLALKVRNNVDLNSYLPPPELLQILPLKSTIRGPECGPQIGPNNPKFVL 181

Query: 181 GMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 238
           GMQALLDLI+ ++GS+S+ AK +GL+TGA+SRL+LSDDSLRMAVND+R SKG+KPLK
Sbjct: 182 GMQALLDLIFAVEGSVSEAAKLLGLSTGALSRLLLSDDSLRMAVNDLRTSKGLKPLK 238

[Close]

BLAST of CmoCh01G009360 vs. NCBI nr
Match: gi|1000966032|ref|XP_015574775.1| (PREDICTED: uncharacterized protein LOC8262657 [Ricinus communis])

HSP 1 Score: 282.3 bits (721), Expect = 7.6e-73
Identity = 143/191 (74.87%), Postives = 165/191 (86.39%), Query Frame = 1


Query: 49  STCSSSSANSVWKG--KEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPT 108
           S C+SS  N    G  K+YL LSDEELMRQCEMDT+KASGPGGQHRNKRESAVR+KH+PT
Sbjct: 61  SACASSRTNGNENGNEKKYLRLSDEELMRQCEMDTYKASGPGGQHRNKRESAVRIKHLPT 120

Query: 109 GITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPG 168
           GI +QAVEDRSQHKNRASAL RLR  LALKVRN V L+ YSPPPELLQILP KSTIR   
Sbjct: 121 GIISQAVEDRSQHKNRASALRRLRTLLALKVRNAVYLDAYSPPPELLQILPPKSTIRGSD 180

Query: 169 CGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVND 228
           CGPQIGPNN KF+ GMQALLDL++ ++GS+S+ AK++GL+TGA+SRLILSDDSLR+AVN+
Sbjct: 181 CGPQIGPNNPKFVLGMQALLDLVFAVEGSVSEAAKFLGLSTGALSRLILSDDSLRLAVNE 240

Query: 229 IRISKGMKPLK 238
           +R SKG+KPLK
Sbjct: 241 LRTSKGLKPLK 251

The following BLAST results are available for this feature:

BLAST of CmoCh01G009360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RF2_NITSB	3.0e-13	37.80	Peptide chain release factor 2 OS=Nitratiruptor sp. (strain SB155-2) GN=prfB PE=...	[more]
RF2_CAMC1	6.8e-13	57.63	Peptide chain release factor 2 OS=Campylobacter concisus (strain 13826) GN=prfB ...	[more]
RF1_LEPCP	8.8e-13	47.44	Peptide chain release factor 1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG ...	[more]
RF1_PSYWF	1.2e-12	55.88	Peptide chain release factor 1 OS=Psychrobacter sp. (strain PRwf-1) GN=prfA PE=3...	[more]
RF2_SULDN	1.2e-12	37.60	Peptide chain release factor 2 OS=Sulfurimonas denitrificans (strain ATCC 33889 ...	[more]

BLAST of CmoCh01G009360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUM8_CUCSA	8.1e-106	83.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646680 PE=4 SV=1	[more]
W9R2G7_9ROSA	1.2e-72	80.68	Peptide chain release factor 2 OS=Morus notabilis GN=L484_025852 PE=4 SV=1	[more]
A0A059BTR1_EUCGR	2.0e-72	74.49	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02930 PE=4 SV=1	[more]
D7SMS6_VITVI	3.4e-72	73.33	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0089g01340 PE=4 SV=...	[more]
K4D711_SOLLC	7.7e-72	67.44	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of CmoCh01G009360 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G33330.1	3.0e-67	70.27	Class I peptide chain release factor	[more]
AT1G56350.1	3.9e-11	45.83	Peptide chain release factor 2	[more]
AT2G47020.1	2.8e-09	50.91	Peptide chain release factor 1	[more]
AT5G36170.1	4.8e-09	33.83	high chlorophyll fluorescent 109	[more]
AT3G62910.1	8.5e-06	41.54	Peptide chain release factor 1	[more]

BLAST of CmoCh01G009360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119127\|ref\|XP_008459491.1\|	1.8e-106	84.58	PREDICTED: uncharacterized protein LOC103498609 isoform X1 [Cucumis melo]	[more]
gi\|449447515\|ref\|XP_004141513.1\|	1.2e-105	83.75	PREDICTED: uncharacterized protein LOC101217430 [Cucumis sativus]	[more]
gi\|659119129\|ref\|XP_008459492.1\|	1.1e-95	78.90	PREDICTED: uncharacterized protein LOC103498609 isoform X2 [Cucumis melo]	[more]
gi\|802573673\|ref\|XP_012068427.1\|	8.1e-75	80.23	PREDICTED: uncharacterized protein LOC105631043 [Jatropha curcas]	[more]
gi\|1000966032\|ref\|XP_015574775.1\|	7.6e-73	74.87	PREDICTED: uncharacterized protein LOC8262657 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000352	Pep_chain_release_fac_I_II
IPR014720	dsRBD_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003747	translation release factor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006415	translational termination

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0006449	regulation of translational termination
biological_process	GO:0006415	translational termination
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
cellular_component	GO:0018444	translation release factor complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003747	translation release factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G009360.1	CmoCh01G009360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000352	Peptide chain release factor class I/class II	PFAM	PF00472	RF-1	coord: 76..134 score: 1.8
IPR014720	Double-stranded RNA-binding domain	GENE3D	G3DSA:3.30.160.20		coord: 76..138 score: 3.6
None	No IPR available	PANTHER	PTHR11075	PEPTIDE CHAIN RELEASE FACTOR	coord: 64..163 score: 2.3
None	No IPR available	unknown	SSF75620	Release factor	coord: 75..136 score: 9.68

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G009360	Cucsa.237890	Cucumber (Gy14) v1	cgycmoB0661
CmoCh01G009360	CmaCh01G008910	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G009360	Cla012365	Watermelon (97103) v1	cmowmB411
CmoCh01G009360	Csa5G646680	Cucumber (Chinese Long) v2	cmocuB472
CmoCh01G009360	MELO3C022111	Melon (DHL92) v3.5.1	cmomeB375
CmoCh01G009360	ClCG08G001950	Watermelon (Charleston Gray)	cmowcgB429
CmoCh01G009360	CSPI05G30220	Wild cucumber (PI 183967)	cmocpiB476
CmoCh01G009360	Lsi08G001920	Bottle gourd (USVL1VR-Ls)	cmolsiB440
CmoCh01G009360	Cp4.1LG02g09700	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G009360	MELO3C022111.2	Melon (DHL92) v3.6.1	cmomedB431
CmoCh01G009360	CsaV3_5G039330	Cucumber (Chinese Long) v3	cmocucB0565
CmoCh01G009360	Cla97C08G146020	Watermelon (97103) v2	cmowmbB481
CmoCh01G009360	Bhi06G000108	Wax gourd	cmowgoB0553
CmoCh01G009360	CsGy5G029610	Cucumber (Gy14) v2	cgybcmoB611
CmoCh01G009360	Carg27119	Silver-seed gourd	carcmoB0832

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G009360	Cucumber (Gy14) v2	cgybcmoB753
CmoCh01G009360	Cucurbita moschata (Rifu)	cmocmoB024
CmoCh01G009360	Cucurbita maxima (Rimu)	cmacmoB056