Carg26855 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26855
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	stress enhanced protein 1, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_344 : 169200 .. 171765 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGAGAAGAACAGATAAGGAGTTTTCCGGCGACAATCGAGCTCCTAAAATGGCCGTTCTTCATGCTTCCGCCTCCCTTTCTCTCGCCATACGCGGTACTCTCTTCATCTCTCTACACTTTCTCCATTTCGTTCTTCCGTTCTGTGATTGTTGAATATCCATCGATTCATAAAACACACGAACACAATGTTGCAGATGCTTCCTTCGCAAGATCAGCCCCAAAACCTTTTCCACTTCGCAGAGGTCGCCTCCCGAATTTATACCGATTCGGAACCACGTTTGCTACTGGCTCTCCACTTGGTACTTACAGAGTTTTATTCTTTCTATTCTCAGTCTAACTCGAATGTTTCTGCTTGATGTATTCATGATTTTTATCCATTAGTACGTTTTTTCATTTCAATCTTCATTTCAAGCATACAATGGAGCATGAATATTGAACTACCCTAATATAATATCAGAATGAAGTCTGAATGTTCTATAATATTGTGGTTATCCTGTTTCTTGCTTATTTTAAGCTGTGACGGTGAAATTGAATTCCATTCTAACATGAAGAGGTATGATTATTCTTAGCTAGAATTGAAATTTTTTCTCGGAAATGTTAGGGAAAACTGACACAGATATAATATATTCCACTTTGGTAGTGGCTTTTATCTTTTATTTCACTTAAAAGGCGTCGTATCAATAGAGGTATTGTCCCTCGTTTATGTATCCGTGATTGATCGTCCCTTGCGTATGTAGGACTTTGTTTGTCTTCCTCAATACTGTGGCTAGACTTTATGAAGTATCGGCTAATGGTTTTTCTTGTTCCCAGTGATAAGCAAGCCAAGTGGTCAAACGAAGCGTGCAATGAAACCAAATTCTGTTTCTATAAGATGTGAGCAAAGTAGCCAAGAGAGTAATAATCTGGATGTTTGGCTTGGGCGGCTAGCAATGGTAGGATTTGCAATTGCAATAAGTGTTGAAATAGCAACAGGCAAAGGTCTTTTGGAGGTATGGCCTTTCTAATTACAGAATTCGAGTCTTGTTACTTAGATTGCTGATAGCTGAAAGAAATTTGTTGTAGGGATTTCTGGACCTTTTGGAATCTGGAATTTGGCATATCTAATTCAAAACACCTTATTGTTATAAGATAATAGCTCCACTCCCTACTTATTTGGACAAAAGTATCTTGTACCACTGGGAGTATTCCATTTAAAGTGTTGAGTTGCACTAAAGATGGCTCTTAAAATGTATTTGGAATGTATTCCACTGGCTAGGTGCAAAACTCTCAACTGTCTACTTGGTCTGTCTTTTTTCAAGTGAATTAGAGAGGCGGATCTGATTGGTACGCTATGAACCAATCATTTTTCTCGTGCGAGTGCCACGGAATGGGCGAAGTTTTTTCTTGTAACTCTGCCATTTATATTCCCAGACACTTATCTCACTGATTTTGGCTTGCAAAAGAAGTGACCGCTGAATTATTCTAAGCTGATGGTTGGATATGCAGCATATGTGTGAGATCTCACATTGATCGGAGAGGGGAACGAACCATTCCTTATAGGGGTGTGGAAAACTCTCTAGCAGATGCGTTTTAAAACCTTGACGGGAACCCCGAAAGGGAAAGCCCAAAGAAGACAATATCTGCTAGTGGTGGGTTTGGGCTGTTACAAATGGTATCAGAACCAGACACTAGACGGTGTGTCAGCGAGGACGCTGGGCCTCAAGGGTGTGGAGAAACATCTCCCTAGCAAACGCATTTTAAAACCGCGAAGCTGACGGTGATACGTAACGGGCCAAAACGGACAATATCTGCTAGTGGCAGGCTTGGACGCTTGATTCATTATTCATTTTGGCCTTGGCCTTATATAAAAGTGGCCGTCTAAGTTTTTGTAGGCCGGGCTGCTCTTTCCAGTAGTGTACTTTGTTCAGTTAGAGGAATACCATTATCTTAGACTTAACCCTCGTTTTCTTTCTAGCGTCTTGTAATACAAGTTTCATACGAGACACATGAAGCACTTAACGAAACCTTACCAGAATCATTGTTTTCATGATGCAGAATTTTGGAGTAACGTCTCCCCTGCCTAGTGCAGCATTGGGAGTCACCGCATTGGTTGGCATATTGACAGCAGTTTTCATCTTTCAATCAGCTTCCAAAAACTGAACACGTCTAAGATTTTCACTGCACATTGGCTGTAAAGTTTGTGATCCTAAAAGATATTTGCTTGATATTCATTTTCATTCGTTCTAATACTCTAGATTGTGAACAACGATCAACTAAATTGGAGTGTTCGACTCAAAACACTTGTGTTTTTGTTGTGGACAGCGGTGATAGAGGGAGAGCCTGTGAAGCCTGCAATTAGCTACATCCAATTCTCAGTGAGGTAGAGCACTCAACTTTTCTTTTTCTTTCTTTCTTTTTGAGTTCTGTGTAGCACTGAAATACTTTCCCTGAGATTAAGTTTGGTTGTGTGATGATAATCATAAGATAAATGTTTAATCACTATCCATAAAAATACAATGAATGATGGATTATGTAAAATATTGTTTGTACAATAAATTCTAAAAGGAAAAATATAAGATATATATA

mRNA sequence

TTGGAGAAGAACAGATAAGGAGTTTTCCGGCGACAATCGAGCTCCTAAAATGGCCGTTCTTCATGCTTCCGCCTCCCTTTCTCTCGCCATACGCGATGCTTCCTTCGCAAGATCAGCCCCAAAACCTTTTCCACTTCGCAGAGGTCGCCTCCCGAATTTATACCGATTCGGAACCACGTTTGCTACTGGCTCTCCACTTGTGATAAGCAAGCCAAGTGGTCAAACGAAGCGTGCAATGAAACCAAATTCTGTTTCTATAAGATGTGAGCAAAGTAGCCAAGAGAGTAATAATCTGGATGTTTGGCTTGGGCGGCTAGCAATGGTAGGATTTGCAATTGCAATAAGTGTTGAAATAGCAACAGGCAAAGGTCTTTTGGAGAATTTTGGAGTAACGTCTCCCCTGCCTAGTGCAGCATTGGGAGTCACCGCATTGGTTGGCATATTGACAGCAGTTTTCATCTTTCAATCAGCTTCCAAAAACTGAACACGTCTAAGATTTTCACTGCACATTGGCTGTAAAGTTTGTGATCCTAAAAGATATTTGCTTGATATTCATTTTCATTCGTTCTAATACTCTAGATTGTGAACAACGATCAACTAAATTGGAGTGTTCGACTCAAAACACTTGTGTTTTTGTTGTGGACAGCGGTGATAGAGGGAGAGCCTGTGAAGCCTGCAATTAGCTACATCCAATTCTCAGTGAGGTAGAGCACTCAACTTTTCTTTTTCTTTCTTTCTTTTTGAGTTCTGTGTAGCACTGAAATACTTTCCCTGAGATTAAGTTTGGTTGTGTGATGATAATCATAAGATAAATGTTTAATCACTATCCATAAAAATACAATGAATGATGGATTATGTAAAATATTGTTTGTACAATAAATTCTAAAAGGAAAAATATAAGATATATATA

Coding sequence (CDS)

ATGGCCGTTCTTCATGCTTCCGCCTCCCTTTCTCTCGCCATACGCGATGCTTCCTTCGCAAGATCAGCCCCAAAACCTTTTCCACTTCGCAGAGGTCGCCTCCCGAATTTATACCGATTCGGAACCACGTTTGCTACTGGCTCTCCACTTGTGATAAGCAAGCCAAGTGGTCAAACGAAGCGTGCAATGAAACCAAATTCTGTTTCTATAAGATGTGAGCAAAGTAGCCAAGAGAGTAATAATCTGGATGTTTGGCTTGGGCGGCTAGCAATGGTAGGATTTGCAATTGCAATAAGTGTTGAAATAGCAACAGGCAAAGGTCTTTTGGAGAATTTTGGAGTAACGTCTCCCCTGCCTAGTGCAGCATTGGGAGTCACCGCATTGGTTGGCATATTGACAGCAGTTTTCATCTTTCAATCAGCTTCCAAAAACTGA

Protein sequence

MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTKRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPSAALGVTALVGILTAVFIFQSASKN

Homology

[Close]

BLAST of Carg26855 vs. NCBI nr
Match: XP_023529447.1 (stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023529449.1 stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023529450.1 stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.8 bits (691), Expect = 2.7e-69
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFARSAPKPFPLRRG LPNLYRFGTTFATGSPLVISKPSGQTK
Sbjct: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGHLPNLYRFGTTFATGSPLVISKPSGQTK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
           RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS
Sbjct: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
           AALGVTALVGILTAVFIFQSASKN
Sbjct: 121 AALGVTALVGILTAVFIFQSASKN 144

[Close]

BLAST of Carg26855 vs. NCBI nr
Match: XP_022927651.1 (stress enhanced protein 1, chloroplastic [Cucurbita moschata] >XP_022927652.1 stress enhanced protein 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 269.6 bits (688), Expect = 6.0e-69
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFARSAPKPFPLRRG LPNLYRFGTTFATGSPLVISKPSGQTK
Sbjct: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGHLPNLYRFGTTFATGSPLVISKPSGQTK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
           RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT+PLPS
Sbjct: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTAPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
           AALGVTALVGILTAVFIFQSASKN
Sbjct: 121 AALGVTALVGILTAVFIFQSASKN 144

[Close]

BLAST of Carg26855 vs. NCBI nr
Match: XP_022988996.1 (stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988997.1 stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988998.1 stress enhanced protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 1.3e-68
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFARSAPKPFPLRRG LPNLYRFGTTFATGSPLVISKP+GQTK
Sbjct: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGHLPNLYRFGTTFATGSPLVISKPTGQTK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
           RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT+PLPS
Sbjct: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTAPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
           AALGVTALVGILTAVFIFQSASKN
Sbjct: 121 AALGVTALVGILTAVFIFQSASKN 144

[Close]

BLAST of Carg26855 vs. NCBI nr
Match: XP_022148743.1 (ADP-ribosylation factor 2 [Momordica charantia])

HSP 1 Score: 233.8 bits (595), Expect = 3.7e-58
Identity = 124/143 (86.71%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSL IRDASFARSAPK FPL R  LPNLYR GT FATGSPLV+SKP+GQ K
Sbjct: 1   MAVLHASASLSLTIRDASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
            A KPNSVSIRCEQS+Q SNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFG+T+PLP+
Sbjct: 61  HAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLTTPLPT 120

Query: 121 AALGVTALVGILTAVFIFQSASK 144
            AL VTALVGILTAVFIFQSASK
Sbjct: 121 VALAVTALVGILTAVFIFQSASK 143

[Close]

BLAST of Carg26855 vs. NCBI nr
Match: XP_023553862.1 (stress enhanced protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.4 bits (594), Expect = 4.8e-58
Identity = 125/145 (86.21%), Postives = 132/145 (91.03%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFA-RSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQT 60
           MA LHASASLSLA+RDASFA R AP+ FPL RG LPNLYR GTTFATGSPLV+SKP+GQ 
Sbjct: 1   MAALHASASLSLAVRDASFARRRAPQVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60

Query: 61  KRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLP 120
           K  +KPNSVSIRCEQSSQESN LDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT+PLP
Sbjct: 61  KHKVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120

Query: 121 SAALGVTALVGILTAVFIFQSASKN 145
           S AL VTALVGILTAVFIFQSA+KN
Sbjct: 121 SVALAVTALVGILTAVFIFQSATKN 145

[Close]

BLAST of Carg26855 vs. TAIR10
Match: AT4G34190.1 (stress enhanced protein 1)

HSP 1 Score: 136.3 bits (342), Expect = 1.4e-32
Identity = 80/146 (54.79%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSA--PKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQ 60
           MA+   SASL+ ++ ++   + A    P    R  +P L    +TFA+GSPL+  K S  
Sbjct: 1   MALSQVSASLAFSLPNSGALKLATITNPTSTCRVHVPQLAGIRSTFASGSPLLPLKLSMT 60

Query: 61  TKRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPL 120
            +   +  SVSIR EQS++ S+ LD+WLGR AMVGFA+AI+VEI+TGKGLLENFGV SPL
Sbjct: 61  RRGGNRAASVSIRSEQSTEGSSGLDIWLGRGAMVGFAVAITVEISTGKGLLENFGVASPL 120

Query: 121 PSAALGVTALVGILTAVFIFQSASKN 145
           P+ AL VTALVG+L AVFIFQS+SKN
Sbjct: 121 PTVALAVTALVGVLAAVFIFQSSSKN 146

[Close]

BLAST of Carg26855 vs. Swiss-Prot
Match: sp|Q9M7I9|STEP1_ARATH (Stress enhanced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SEP1 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-31
Identity = 80/146 (54.79%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSA--PKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQ 60
           MA+   SASL+ ++ ++   + A    P    R  +P L    +TFA+GSPL+  K S  
Sbjct: 1   MALSQVSASLAFSLPNSGALKLATITNPTSTCRVHVPQLAGIRSTFASGSPLLPLKLSMT 60

Query: 61  TKRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPL 120
            +   +  SVSIR EQS++ S+ LD+WLGR AMVGFA+AI+VEI+TGKGLLENFGV SPL
Sbjct: 61  RRGGNRAASVSIRSEQSTEGSSGLDIWLGRGAMVGFAVAITVEISTGKGLLENFGVASPL 120

Query: 121 PSAALGVTALVGILTAVFIFQSASKN 145
           P+ AL VTALVG+L AVFIFQS+SKN
Sbjct: 121 PTVALAVTALVGVLAAVFIFQSSSKN 146

[Close]

BLAST of Carg26855 vs. TrEMBL
Match: tr|A0A1S3C121|A0A1S3C121_CUCME (stress enhanced protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495270 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.0e-56
Identity = 123/144 (85.42%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFAR+APK FPL R  LPNLYR GTTFATGSPLV+SKP GQ K
Sbjct: 1   MAVLHASASLSLAIRDASFARTAPKAFPLHRSLLPNLYRVGTTFATGSPLVLSKPIGQKK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
            A+K NSVSIRCEQS+Q+S NLDVWLGR AMVGFAIAISVEIATGKGLLEN GVTSPLPS
Sbjct: 61  HAVKQNSVSIRCEQSTQQS-NLDVWLGRFAMVGFAIAISVEIATGKGLLENLGVTSPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
            AL VTALVG+LTAVFIFQSA+KN
Sbjct: 121 VALAVTALVGVLTAVFIFQSATKN 143

[Close]

BLAST of Carg26855 vs. TrEMBL
Match: tr|A0A0A0K2J5|A0A0A0K2J5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G072820 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.9e-56
Identity = 120/144 (83.33%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MA+LHASASLSLA RD SFAR+APK FPL R  LPNL+R GTTFATGSPLV+SKP+GQ K
Sbjct: 1   MALLHASASLSLATRDVSFARTAPKAFPLHRSPLPNLFRIGTTFATGSPLVLSKPTGQKK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
            A+K NSVSIRCEQS+Q+S NLDVWLGR AMVGFAIAISVEIATGKGLLENFGVTSPLPS
Sbjct: 61  HALKQNSVSIRCEQSTQQS-NLDVWLGRFAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
            AL VTALVG+LTAVFIFQSA+KN
Sbjct: 121 VALAVTALVGVLTAVFIFQSATKN 143

[Close]

BLAST of Carg26855 vs. TrEMBL
Match: tr|A0A2P5ERF0|A0A2P5ERF0_9ROSA (Chlorophyll a/b binding protein domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_161530 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.8e-38
Identity = 99/146 (67.81%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLP--NLYRFGTTFATGSPLVISKPSGQ 60
           MAV   SASLS++IRDA    SA  P      RLP  NL R    FATGSPLV+ + S Q
Sbjct: 1   MAVAQISASLSVSIRDACAFSSATSP-----SRLPISNLARTRPAFATGSPLVLRRTSCQ 60

Query: 61  TKRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPL 120
            K A K    +IR EQS+Q+SN+LDVWLGRLAMVGFA+AI+VEIATGKGLLENFG+TSPL
Sbjct: 61  RKVACKATPFTIRSEQSTQDSNSLDVWLGRLAMVGFAVAITVEIATGKGLLENFGLTSPL 120

Query: 121 PSAALGVTALVGILTAVFIFQSASKN 145
           P+ AL VTALVGILTAVFIFQSASKN
Sbjct: 121 PTVALAVTALVGILTAVFIFQSASKN 141

[Close]

BLAST of Carg26855 vs. TrEMBL
Match: tr|A0A2P5DN21|A0A2P5DN21_PARAD (Chlorophyll a/b binding protein domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_047330 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.2e-38
Identity = 98/146 (67.12%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLP--NLYRFGTTFATGSPLVISKPSGQ 60
           MAV+  SASLS+++RDA    SA  P      RLP  NL R    FATGSPLV+ + S Q
Sbjct: 1   MAVVQISASLSVSMRDACAFSSATSP-----SRLPISNLARTRPAFATGSPLVLRRTSCQ 60

Query: 61  TKRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPL 120
            K A K    +IR EQS+Q SN+LDVWLGRLAMVGFA+AI+VEIATGKGLLENFG+TSPL
Sbjct: 61  RKVACKATPFTIRSEQSTQNSNSLDVWLGRLAMVGFAVAITVEIATGKGLLENFGLTSPL 120

Query: 121 PSAALGVTALVGILTAVFIFQSASKN 145
           P+ AL VTALVGILTAVFIFQSASKN
Sbjct: 121 PTVALAVTALVGILTAVFIFQSASKN 141

[Close]

BLAST of Carg26855 vs. TrEMBL
Match: tr|A0A1Q3B2V9|A0A1Q3B2V9_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05812 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.8e-37
Identity = 91/144 (63.19%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MA+   S +LSL+IRD  +   +P    + R  +P+L R  + FATGSPL+IS  S + +
Sbjct: 1   MALAQLSTTLSLSIRDV-YTIGSPTTHNVSRFPIPSLVRGRSVFATGSPLLISPTSYRRR 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
            A+K  SVSIRCEQS+Q+ N+LDVWLGR AMVGF++AI+VEIATGKGLLENFG+TSPLP+
Sbjct: 61  PAIKATSVSIRCEQSTQDDNSLDVWLGRFAMVGFSVAITVEIATGKGLLENFGLTSPLPT 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
           AAL V ALVGILTAVFIFQSASK+
Sbjct: 121 AALAVAALVGILTAVFIFQSASKS 143

The following BLAST results are available for this feature:

BLAST of Carg26855 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529447.1	2.7e-69	99.31	stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023529...	[more]
XP_022927651.1	6.0e-69	98.61	stress enhanced protein 1, chloroplastic [Cucurbita moschata] >XP_022927652.1 st...	[more]
XP_022988996.1	1.3e-68	97.92	stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988997.1 stre...	[more]
XP_022148743.1	3.7e-58	86.71	ADP-ribosylation factor 2 [Momordica charantia]	[more]
XP_023553862.1	4.8e-58	86.21	stress enhanced protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg26855 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34190.1	1.4e-32	54.79	stress enhanced protein 1	[more]

BLAST of Carg26855 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M7I9\|STEP1_ARATH	2.6e-31	54.79	Stress enhanced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SEP1...	[more]

BLAST of Carg26855 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C121\|A0A1S3C121_CUCME	1.0e-56	85.42	stress enhanced protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495270...	[more]
tr\|A0A0A0K2J5\|A0A0A0K2J5_CUCSA	3.9e-56	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G072820 PE=4 SV=1	[more]
tr\|A0A2P5ERF0\|A0A2P5ERF0_9ROSA	2.8e-38	67.81	Chlorophyll a/b binding protein domain containing protein OS=Trema orientalis OX...	[more]
tr\|A0A2P5DN21\|A0A2P5DN21_PARAD	6.2e-38	67.12	Chlorophyll a/b binding protein domain containing protein OS=Parasponia anderson...	[more]
tr\|A0A1Q3B2V9\|A0A1Q3B2V9_CEPFO	1.8e-37	63.19	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05812 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26855-RA	Carg26855-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14154:SF18	STRESS ENHANCED PROTEIN 1, CHLOROPLASTIC	coord: 2..144
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 2..144
None	No IPR available	SUPERFAMILY	SSF103511	Chlorophyll a-b binding protein	coord: 80..123

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26855	Csa7G072820	Cucumber (Chinese Long) v2	carcuB0011
Carg26855	MELO3C018482	Melon (DHL92) v3.5.1	carmeB0009
Carg26855	ClCG02G006290	Watermelon (Charleston Gray)	carwcgB0011
Carg26855	CSPI07G07300	Wild cucumber (PI 183967)	carcpiB0011
Carg26855	Cucsa.219540	Cucumber (Gy14) v1	carcgyB0010
Carg26855	CmaCh19G005820	Cucurbita maxima (Rimu)	carcmaB0019
Carg26855	CmaCh11G017250	Cucurbita maxima (Rimu)	carcmaB0018
Carg26855	CmoCh19G005980	Cucurbita moschata (Rifu)	carcmoB0019
Carg26855	CmoCh11G013900	Cucurbita moschata (Rifu)	carcmoB0018
Carg26855	Lsi03G005280	Bottle gourd (USVL1VR-Ls)	carlsiB010
Carg26855	Cp4.1LG15g04620	Cucurbita pepo (Zucchini)	carcpeB0016
Carg26855	Cp4.1LG04g07800	Cucurbita pepo (Zucchini)	carcpeB0017
Carg26855	MELO3C018482.2	Melon (DHL92) v3.6.1	carmedB0010
Carg26855	CsaV3_7G008250	Cucumber (Chinese Long) v3	carcucB0011
Carg26855	Cla97C02G033260	Watermelon (97103) v2	carwmbB0010
Carg26855	Bhi05G000964	Wax gourd	carwgoB0012

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26855	Carg16366	Silver-seed gourd	carcarB008

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26855	Watermelon (97103) v1	carwmB0013
Carg26855	Cucumber (Gy14) v2	carcgybB0010