CmoCh19G005980 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G005980
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionStress enhanced protein 1, putative
LocationCmo_Chr19 : 6669841 .. 6672379 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGGTGGTATCTTTGGCAGTTGTTGTAATGAAGTGAATGATAATAGAATGTGACCCACGAATTAGTGTCAACTTAACCCGAATGAGTTTTTTTTTTTTTTGACATAATTTTAAAGCAATTGAGTACTTCAAAAAAAAAAAAATTGATGGTACTAAAAAAGTTTGAAGGTACTAATGTTAAGATATCGAGGGTACTAAAAAAGTTCAAATGACTATACTAATGGCAAAAAATTGAGGGTACTAAACAAGTTTTAATGTACTAATAGTAAGAAGCCGAGGATATTAAAAAAATATAAAGGTACTAATTGTAAGAAACCGAGAGTATTAAAAAAATTTAAATATATTAATGGTACTATATTTGTAATGGCCCAATCCTACCGCTAGTAGATGTTGTTCTCTTTGAGTTGTCTCTGAAGGGTTTAAAACGCGTCTGCTAGGGGAAGGTTTCACACCCTAGGGACACTCTTTGGGTTGTCCTTGAAGGGTTGCGATAGGATAAGATTTCACACCTTGGGCTGTCCCTGAAAGCTTTAAAACGCAAACCTTATAAATTGTGTGGTTTTAAAACTGGTTTACACCCTTATAAATGGTGTGACTTTAAAACGAGTCGGGTTTAACAGCCTTATAAATAGACGTTTGTTCTATTCCCATCACAATATTAACTTTTTATTTTAAAGAATTTTTTAATTTTTCTAAAATAAAATTTGAGAACATTAATGAAATTTTTGAAGATGAGATATCTTAGAAAGTATTATTAATTGAGTGTACTCGAAAAAATGAAAAAAAGGTGAAACACGTGGCAGTTTGGCATTCCTCAAATAGCAAAATGCGGAAGAAAACGGCCATCGTCAACCGCTGGTATCCGTGTATTTGGTCATTGAGGAAGAAGGGATAAGGAATTTCAGGAAAAAGCTCAGGATTTCTCCGGCGTCAATCGTGATCTTAAAATGGCGGCTCTTCATGCTTCGGCCTCCCTCTCTCTCGCCGTACGCGGTACTCTATCTCTCTCACAGCTTCTCCGTCTCTTCGGTTCTGTGATTGTTGAATAATATCCAAACGATTGATAAACCAAAACAATGTTTCAGATACTTCCTTCGCAAGAAGAAGAGCACCAGAAGTCTTTCCTCTTCCCAGAGGCTCCCTCCCGAATTCATACCGTCTTGGAACGACGTTTGCTACTGGCTCTCCACTCGGTACTGATTCTTATTATTTCTATTTTTCGTCTAGTTCGAATGTTTCTGCTTGATTTTTTGATGATTTCTATCATTTGACGAGTTCTTCAGTTCAATTTTATGTTGGAGTTGCAATTTCAAGTATACAGTGGTGTATATTACGAATTCTGGCCATGAACATTGAACTGCCCTAACATCTAAATAAAATCTGGATATGGTGTTAAGAAAGAAATATTGCAAAAGTTCCAGTCTAAGTGATCTAATGCAACTTTCATTCTGACTTAGAGAGTTTTATGGTTACTGTTAGATTATTAGGAAATTGGAGCTGGAGCCATTTGAAAAATAGTATGGTAATTGCAATTTTTTAATTCTTCGTAGATTTTGGCAAAGGAAGCAATAGATTCCACTTGATTTTATAAGTATCAGCTAATGGTTACTCTTGTTCCTAGTGTTAAGCAAGCCAACTGGTCAAAAGAAACATACAGTGAAACCAAATTCTGTTTCTATACGATGTGAGCAAAGTAGCCAAGAGAGTAACATTCTGGATGTTTGGCTTGGGCGGCTTGCGATGGTTGGATTTGCAATTGCAATTAGTGTTGAAATAGCAACAGGCAAGGGACTTTTGGAGGTATGGCCTTTCTAATTACAGCAAATGGGTCATCGTTACTTATATTTCTGATAGCTGATAGAAATTGTTTAGGAATTTCTTTAGCTTTTGGAAGCTCGAATTTTGCCAAGTTTATTCTGAAGTTCTTATTGTTTATAGCTAATAAGATACTAGCTCCACAGCAGATTGATATCAGGCCTCATATTCTGTTCAAAAAATTATATTCTCCATGATTATTTATACAAAAGTATCCTTTGTACCACTTTGAGTATTCCGTTTGAAGTGTTGGGTTGCTCTAATGATGGCCCCTGAAACGTGTCTAGATTGTATTCCTATGGCTTTTTTTTCGTCACTCTGCCATTTTTATTCTCAGACACTTGTCTCGCTGATTTTGGCTTGATATAAAAGTGACCATTGAATTGTTCTAGGCTGGTCATTGGATGTGCGGCATCTGCCTGATTGTTATGGCCTGATCTATTATTCTAGGCTAGTCGTTGTATATGCTTAATTCTTTAGCACTGTGTTTGATCTTCCCATTTGTTTATTTTGTCCAGTTAGAGGAATTCCCAGTGTCATGCCAGATAAGTTTCACAGGTGATACCACATTAAATTAACTGAAACCTCACCAGAATCACTGTTTTCATGATGCAGAATTTTGGAGTAACGACTCCTCTGCCTAGTGTGGCCTTGGCAGTTACCGCACTGGTTGGCATACTGACAGCAGTTTTCATCTTCCAATCAGCTACCAAAAACTGA

mRNA sequence

ATGGGTTGGTGGGATAAGGAATTTCAGGAAAAAGCTCAGGATTTCTCCGGCGTCAATCGTGATCTTAAAATGGCGGCTCTTCATGCTTCGGCCTCCCTCTCTCTCGCCGTACGCGATACTTCCTTCGCAAGAAGAAGAGCACCAGAAGTCTTTCCTCTTCCCAGAGGCTCCCTCCCGAATTCATACCGTCTTGGAACGACGTTTGCTACTGGCTCTCCACTCGTGTTAAGCAAGCCAACTGGTCAAAAGAAACATACAGTGAAACCAAATTCTGTTTCTATACGATGTGAGCAAAGTAGCCAAGAGAGTAACATTCTGGATGTTTGGCTTGGGCGGCTTGCGATGGTTGGATTTGCAATTGCAATTAGTGTTGAAATAGCAACAGGCAAGGGACTTTTGGAGAATTTTGGAGTAACGACTCCTCTGCCTAGTGTGGCCTTGGCAGTTACCGCACTGGTTGGCATACTGACAGCAGTTTTCATCTTCCAATCAGCTACCAAAAACTGA

Coding sequence (CDS)

ATGGGTTGGTGGGATAAGGAATTTCAGGAAAAAGCTCAGGATTTCTCCGGCGTCAATCGTGATCTTAAAATGGCGGCTCTTCATGCTTCGGCCTCCCTCTCTCTCGCCGTACGCGATACTTCCTTCGCAAGAAGAAGAGCACCAGAAGTCTTTCCTCTTCCCAGAGGCTCCCTCCCGAATTCATACCGTCTTGGAACGACGTTTGCTACTGGCTCTCCACTCGTGTTAAGCAAGCCAACTGGTCAAAAGAAACATACAGTGAAACCAAATTCTGTTTCTATACGATGTGAGCAAAGTAGCCAAGAGAGTAACATTCTGGATGTTTGGCTTGGGCGGCTTGCGATGGTTGGATTTGCAATTGCAATTAGTGTTGAAATAGCAACAGGCAAGGGACTTTTGGAGAATTTTGGAGTAACGACTCCTCTGCCTAGTGTGGCCTTGGCAGTTACCGCACTGGTTGGCATACTGACAGCAGTTTTCATCTTCCAATCAGCTACCAAAAACTGA
Homology
[Close]
BLAST of CmoCh19G005980 vs. Swiss-Prot
Match: STEP1_ARATH (Stress enhanced protein 1, chloroplastic OS=Arabidopsis thaliana GN=SEP1 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-28
Identity = 79/147 (53.74%), Postives = 106/147 (72.11%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLP--RGSLPNSYRLGTTFATGSPLVLSKPTG 83
           MA    SASL+ ++ ++  A + A    P    R  +P    + +TFA+GSPL+  K + 
Sbjct: 1   MALSQVSASLAFSLPNSG-ALKLATITNPTSTCRVHVPQLAGIRSTFASGSPLLPLKLSM 60

Query: 84  QKKHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTP 143
            ++   +  SVSIR EQS++ S+ LD+WLGR AMVGFA+AI+VEI+TGKGLLENFGV +P
Sbjct: 61  TRRGGNRAASVSIRSEQSTEGSSGLDIWLGRGAMVGFAVAITVEISTGKGLLENFGVASP 120

Query: 144 LPSVALAVTALVGILTAVFIFQSATKN 169
           LP+VALAVTALVG+L AVFIFQS++KN
Sbjct: 121 LPTVALAVTALVGVLAAVFIFQSSSKN 146

[Close]
BLAST of CmoCh19G005980 vs. TrEMBL
Match: A0A0A0K2J5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072820 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.4e-56
Identity = 123/145 (84.83%), Postives = 131/145 (90.34%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 83
           MA LHASASLSLA RD SFAR  AP+ FPL R  LPN +R+GTTFATGSPLVLSKPTGQK
Sbjct: 1   MALLHASASLSLATRDVSFART-APKAFPLHRSPLPNLFRIGTTFATGSPLVLSKPTGQK 60

Query: 84  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 143
           KH +K NSVSIRCEQS+Q+SN LDVWLGR AMVGFAIAISVEIATGKGLLENFGVT+PLP
Sbjct: 61  KHALKQNSVSIRCEQSTQQSN-LDVWLGRFAMVGFAIAISVEIATGKGLLENFGVTSPLP 120

Query: 144 SVALAVTALVGILTAVFIFQSATKN 169
           SVALAVTALVG+LTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGVLTAVFIFQSATKN 143

[Close]
BLAST of CmoCh19G005980 vs. TrEMBL
Match: A0A061E049_THECC (Stress enhanced protein 1, putative OS=Theobroma cacao GN=TCM_007129 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-35
Identity = 88/145 (60.69%), Postives = 110/145 (75.86%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 83
           MA    SASLSL+V         +P    + R  + +  R  +TFATGSPL++ + + Q+
Sbjct: 1   MALAQVSASLSLSVH--VICPISSPRTRTIARLPISSFSRSSSTFATGSPLLIRRTSHQR 60

Query: 84  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 143
           K   K  SVSI+CEQS+QE N LDVWLGRLAMVGFA+AI+VEI+TGKGLLENFG+TTPLP
Sbjct: 61  KPVCKATSVSIKCEQSTQEGNSLDVWLGRLAMVGFAVAITVEISTGKGLLENFGLTTPLP 120

Query: 144 SVALAVTALVGILTAVFIFQSATKN 169
           +VALAVTALVG+LTA+FIFQSA+K+
Sbjct: 121 TVALAVTALVGVLTAIFIFQSASKS 143

[Close]
BLAST of CmoCh19G005980 vs. TrEMBL
Match: W9S8R3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027468 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.3e-35
Identity = 91/145 (62.76%), Postives = 107/145 (73.79%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 83
           MA     ASL L++RD   A    P    LP  +   + R  T FATGSPLVL + + Q+
Sbjct: 1   MAVAQVFASLPLSIRDVC-AITSLPAPSRLPLSNFARTSR--TAFATGSPLVLRRTSCQR 60

Query: 84  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 143
           K   K     IRCEQS++ES+ LDVWLGRLAMVGFA+AISVEIATG+GLLENFG+TTPLP
Sbjct: 61  KTARKATPFPIRCEQSTEESSSLDVWLGRLAMVGFAVAISVEIATGRGLLENFGLTTPLP 120

Query: 144 SVALAVTALVGILTAVFIFQSATKN 169
           +VALAVTALVG+LTAVFIFQSA+KN
Sbjct: 121 TVALAVTALVGVLTAVFIFQSASKN 142

[Close]
BLAST of CmoCh19G005980 vs. TrEMBL
Match: A0A0K9QC56_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_195700 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.0e-35
Identity = 82/145 (56.55%), Postives = 109/145 (75.17%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 83
           MA  H SAS++L++ D+    R +P +  + R    N  R  T+F  GSPLV+   + Q 
Sbjct: 1   MAVSHVSASVNLSIYDS--CTRHSPRLGTISRLPTSNFARNATSFVRGSPLVIRTSSAQL 60

Query: 84  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 143
           K   K NSVSI+CEQS+ + N LDVWLGR+AM+GFA+AI++E++TGKGLLENFG+++PLP
Sbjct: 61  KAVQKSNSVSIKCEQSANDGNGLDVWLGRIAMIGFAVAITIEVSTGKGLLENFGLSSPLP 120

Query: 144 SVALAVTALVGILTAVFIFQSATKN 169
           +VALAVT LVG+LTAVFIFQSA+KN
Sbjct: 121 TVALAVTGLVGVLTAVFIFQSASKN 143

[Close]
BLAST of CmoCh19G005980 vs. TrEMBL
Match: V4RP95_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029534mg PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 9.0e-35
Identity = 90/145 (62.07%), Postives = 110/145 (75.86%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 83
           MA    SASLSL+V   +F+  +   +  LP  S     R+GTTFATGSPL L + + Q+
Sbjct: 1   MALAQVSASLSLSVNAFAFSSAKTRTISRLPTSS---HARIGTTFATGSPL-LWRISPQR 60

Query: 84  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 143
           K   K  SV+IRCEQ ++  N LDVWLGRLAMVGFA+AISVEI+TGKGLLENFG+T+PLP
Sbjct: 61  KCLQKATSVTIRCEQGTKGRNSLDVWLGRLAMVGFAVAISVEISTGKGLLENFGLTSPLP 120

Query: 144 SVALAVTALVGILTAVFIFQSATKN 169
           + ALAVTALVG+LTAVFIFQSA++N
Sbjct: 121 TAALAVTALVGVLTAVFIFQSASEN 141

[Close]
BLAST of CmoCh19G005980 vs. TAIR10
Match: AT4G34190.1 (AT4G34190.1 stress enhanced protein 1)

HSP 1 Score: 127.5 bits (319), Expect = 7.8e-30
Identity = 79/147 (53.74%), Postives = 106/147 (72.11%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLP--RGSLPNSYRLGTTFATGSPLVLSKPTG 83
           MA    SASL+ ++ ++  A + A    P    R  +P    + +TFA+GSPL+  K + 
Sbjct: 1   MALSQVSASLAFSLPNSG-ALKLATITNPTSTCRVHVPQLAGIRSTFASGSPLLPLKLSM 60

Query: 84  QKKHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTP 143
            ++   +  SVSIR EQS++ S+ LD+WLGR AMVGFA+AI+VEI+TGKGLLENFGV +P
Sbjct: 61  TRRGGNRAASVSIRSEQSTEGSSGLDIWLGRGAMVGFAVAITVEISTGKGLLENFGVASP 120

Query: 144 LPSVALAVTALVGILTAVFIFQSATKN 169
           LP+VALAVTALVG+L AVFIFQS++KN
Sbjct: 121 LPTVALAVTALVGVLAAVFIFQSSSKN 146

[Close]
BLAST of CmoCh19G005980 vs. NCBI nr
Match: gi|778730201|ref|XP_011659724.1| (PREDICTED: ADP-ribosylation factor 1-like [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 3.5e-56
Identity = 123/145 (84.83%), Postives = 131/145 (90.34%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 83
           MA LHASASLSLA RD SFAR  AP+ FPL R  LPN +R+GTTFATGSPLVLSKPTGQK
Sbjct: 1   MALLHASASLSLATRDVSFART-APKAFPLHRSPLPNLFRIGTTFATGSPLVLSKPTGQK 60

Query: 84  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 143
           KH +K NSVSIRCEQS+Q+SN LDVWLGR AMVGFAIAISVEIATGKGLLENFGVT+PLP
Sbjct: 61  KHALKQNSVSIRCEQSTQQSN-LDVWLGRFAMVGFAIAISVEIATGKGLLENFGVTSPLP 120

Query: 144 SVALAVTALVGILTAVFIFQSATKN 169
           SVALAVTALVG+LTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGVLTAVFIFQSATKN 143

[Close]
BLAST of CmoCh19G005980 vs. NCBI nr
Match: gi|700188662|gb|KGN43895.1| (hypothetical protein Csa_7G072820 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 3.5e-56
Identity = 123/145 (84.83%), Postives = 131/145 (90.34%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 83
           MA LHASASLSLA RD SFAR  AP+ FPL R  LPN +R+GTTFATGSPLVLSKPTGQK
Sbjct: 1   MALLHASASLSLATRDVSFART-APKAFPLHRSPLPNLFRIGTTFATGSPLVLSKPTGQK 60

Query: 84  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 143
           KH +K NSVSIRCEQS+Q+SN LDVWLGR AMVGFAIAISVEIATGKGLLENFGVT+PLP
Sbjct: 61  KHALKQNSVSIRCEQSTQQSN-LDVWLGRFAMVGFAIAISVEIATGKGLLENFGVTSPLP 120

Query: 144 SVALAVTALVGILTAVFIFQSATKN 169
           SVALAVTALVG+LTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGVLTAVFIFQSATKN 143

[Close]
BLAST of CmoCh19G005980 vs. NCBI nr
Match: gi|659109992|ref|XP_008454990.1| (PREDICTED: stress enhanced protein 1, chloroplastic [Cucumis melo])

HSP 1 Score: 225.3 bits (573), Expect = 7.8e-56
Identity = 123/145 (84.83%), Postives = 130/145 (89.66%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 83
           MA LHASASLSLA+RD SFAR  AP+ FPL R  LPN YR+GTTFATGSPLVLSKP GQK
Sbjct: 1   MAVLHASASLSLAIRDASFART-APKAFPLHRSLLPNLYRVGTTFATGSPLVLSKPIGQK 60

Query: 84  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 143
           KH VK NSVSIRCEQS+Q+SN LDVWLGR AMVGFAIAISVEIATGKGLLEN GVT+PLP
Sbjct: 61  KHAVKQNSVSIRCEQSTQQSN-LDVWLGRFAMVGFAIAISVEIATGKGLLENLGVTSPLP 120

Query: 144 SVALAVTALVGILTAVFIFQSATKN 169
           SVALAVTALVG+LTAVFIFQSATKN
Sbjct: 121 SVALAVTALVGVLTAVFIFQSATKN 143

[Close]
BLAST of CmoCh19G005980 vs. NCBI nr
Match: gi|720087823|ref|XP_010244259.1| (PREDICTED: stress enhanced protein 1, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-35
Identity = 91/144 (63.19%), Postives = 110/144 (76.39%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 83
           MA    SASL L+V D   ++     V  LP+  L N  R  T+F  GSPL++ + + Q+
Sbjct: 1   MAQALVSASLYLSVHDVGVSKSVQARV--LPQLPLANISRAATSFTRGSPLLVWRTSCQR 60

Query: 84  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 143
           K   K  SVSIRCEQS++ESN LD+WLGRLAMVGFA+AISVEIATGKGLLENFG+TTPLP
Sbjct: 61  KLVSKATSVSIRCEQSTKESNGLDIWLGRLAMVGFAVAISVEIATGKGLLENFGLTTPLP 120

Query: 144 SVALAVTALVGILTAVFIFQSATK 168
           +VALAVTALVG+LTAVFIFQSA++
Sbjct: 121 TVALAVTALVGVLTAVFIFQSASE 142

[Close]
BLAST of CmoCh19G005980 vs. NCBI nr
Match: gi|590686903|ref|XP_007042514.1| (Stress enhanced protein 1, putative [Theobroma cacao])

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35
Identity = 88/145 (60.69%), Postives = 110/145 (75.86%), Query Frame = 1 

Query: 24  MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 83
           MA    SASLSL+V         +P    + R  + +  R  +TFATGSPL++ + + Q+
Sbjct: 1   MALAQVSASLSLSVH--VICPISSPRTRTIARLPISSFSRSSSTFATGSPLLIRRTSHQR 60

Query: 84  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 143
           K   K  SVSI+CEQS+QE N LDVWLGRLAMVGFA+AI+VEI+TGKGLLENFG+TTPLP
Sbjct: 61  KPVCKATSVSIKCEQSTQEGNSLDVWLGRLAMVGFAVAITVEISTGKGLLENFGLTTPLP 120

Query: 144 SVALAVTALVGILTAVFIFQSATKN 169
           +VALAVTALVG+LTA+FIFQSA+K+
Sbjct: 121 TVALAVTALVGVLTAIFIFQSASKS 143

The following BLAST results are available for this feature:
BLAST of CmoCh19G005980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
STEP1_ARATH1.4e-2853.74Stress enhanced protein 1, chloroplastic OS=Arabidopsis thaliana GN=SEP1 PE=2 SV... [more]
BLAST of CmoCh19G005980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2J5_CUCSA2.4e-5684.83Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072820 PE=4 SV=1[more]
A0A061E049_THECC1.1e-3560.69Stress enhanced protein 1, putative OS=Theobroma cacao GN=TCM_007129 PE=4 SV=1[more]
W9S8R3_9ROSA5.3e-3562.76Uncharacterized protein OS=Morus notabilis GN=L484_027468 PE=4 SV=1[more]
A0A0K9QC56_SPIOL9.0e-3556.55Uncharacterized protein OS=Spinacia oleracea GN=SOVF_195700 PE=4 SV=1[more]
V4RP95_9ROSI9.0e-3562.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029534mg PE=4 SV=1[more]
BLAST of CmoCh19G005980 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G34190.17.8e-3053.74 stress enhanced protein 1[more]
BLAST of CmoCh19G005980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730201|ref|XP_011659724.1|3.5e-5684.83PREDICTED: ADP-ribosylation factor 1-like [Cucumis sativus][more]
gi|700188662|gb|KGN43895.1|3.5e-5684.83hypothetical protein Csa_7G072820 [Cucumis sativus][more]
gi|659109992|ref|XP_008454990.1|7.8e-5684.83PREDICTED: stress enhanced protein 1, chloroplastic [Cucumis melo][more]
gi|720087823|ref|XP_010244259.1|1.2e-3563.19PREDICTED: stress enhanced protein 1, chloroplastic [Nelumbo nucifera][more]
gi|590686903|ref|XP_007042514.1|1.5e-3560.69Stress enhanced protein 1, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023329Chlorophyll_a/b-bd_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006725 cellular aromatic compound metabolic process
biological_process GO:0071840 cellular component organization or biogenesis
biological_process GO:0034641 cellular nitrogen compound metabolic process
biological_process GO:0046483 heterocycle metabolic process
biological_process GO:1901360 organic cyclic compound metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0009416 response to light stimulus
biological_process GO:0044763 single-organism cellular process
biological_process GO:0044710 single-organism metabolic process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G005980.1CmoCh19G005980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding protein domainGENE3DG3DSA:1.10.3460.10coord: 111..140
score: 5.
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 105..152
score: 1.8
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 82..161
score: 5.0
NoneNo IPR availablePANTHERPTHR14154:SF18SUBFAMILY NOT NAMEDcoord: 82..161
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G005980Cucsa.219540Cucumber (Gy14) v1cgycmoB0627
CmoCh19G005980CmaCh19G005820Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G005980CmaCh11G017250Cucurbita maxima (Rimu)cmacmoB143
CmoCh19G005980Csa7G072820Cucumber (Chinese Long) v2cmocuB519
CmoCh19G005980MELO3C018482Melon (DHL92) v3.5.1cmomeB454
CmoCh19G005980ClCG02G006290Watermelon (Charleston Gray)cmowcgB459
CmoCh19G005980CSPI07G07300Wild cucumber (PI 183967)cmocpiB525
CmoCh19G005980Lsi03G005280Bottle gourd (USVL1VR-Ls)cmolsiB468
CmoCh19G005980Cp4.1LG04g07800Cucurbita pepo (Zucchini)cmocpeB494
CmoCh19G005980Cp4.1LG15g04620Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G005980MELO3C018482.2Melon (DHL92) v3.6.1cmomedB523
CmoCh19G005980CsaV3_7G008250Cucumber (Chinese Long) v3cmocucB0623
CmoCh19G005980Cla97C02G033260Watermelon (97103) v2cmowmbB512
CmoCh19G005980Bhi05G000964Wax gourdcmowgoB0657
CmoCh19G005980Carg26855Silver-seed gourdcarcmoB0019
CmoCh19G005980Carg16366Silver-seed gourdcarcmoB0615
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh19G005980CmoCh11G013900Cucurbita moschata (Rifu)cmocmoB110
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G005980Cucurbita moschata (Rifu)cmocmoB352
CmoCh19G005980Cucurbita moschata (Rifu)cmocmoB395
CmoCh19G005980Cucurbita maxima (Rimu)cmacmoB718
CmoCh19G005980Cucurbita maxima (Rimu)cmacmoB329
CmoCh19G005980Wild cucumber (PI 183967)cmocpiB510
CmoCh19G005980Cucumber (Chinese Long) v2cmocuB504
CmoCh19G005980Melon (DHL92) v3.5.1cmomeB477
CmoCh19G005980Watermelon (Charleston Gray)cmowcgB464
CmoCh19G005980Watermelon (97103) v1cmowmB490
CmoCh19G005980Watermelon (97103) v1cmowmB496
CmoCh19G005980Bottle gourd (USVL1VR-Ls)cmolsiB460
CmoCh19G005980Bottle gourd (USVL1VR-Ls)cmolsiB469
CmoCh19G005980Bottle gourd (USVL1VR-Ls)cmolsiB478
CmoCh19G005980Bottle gourd (USVL1VR-Ls)cmolsiB482
CmoCh19G005980Cucumber (Gy14) v2cgybcmoB352
CmoCh19G005980Cucumber (Gy14) v2cgybcmoB492
CmoCh19G005980Cucumber (Gy14) v2cgybcmoB928
CmoCh19G005980Melon (DHL92) v3.6.1cmomedB526
CmoCh19G005980Melon (DHL92) v3.6.1cmomedB549
CmoCh19G005980Melon (DHL92) v3.6.1cmomedB553
CmoCh19G005980Silver-seed gourdcarcmoB0512
CmoCh19G005980Cucumber (Chinese Long) v3cmocucB0602
CmoCh19G005980Cucumber (Chinese Long) v3cmocucB0611
CmoCh19G005980Watermelon (97103) v2cmowmbB502
CmoCh19G005980Watermelon (97103) v2cmowmbB516
CmoCh19G005980Watermelon (97103) v2cmowmbB519
CmoCh19G005980Wax gourdcmowgoB0640
CmoCh19G005980Wax gourdcmowgoB0670