Carg26814 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26814
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ethylene-responsive transcription factor
Location	Cucurbita_argyrosperma_scaffold_340 : 93512 .. 94228 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGTGGCTTCTCACTCAAAGCTCTGGGAATGTTGTCCACGAATTCCCCACGGCTTTTACAGCTCTTCCCCCTTTTCCTTTATAAACTCTTCTCTGTTTCTTCCCCATTTCATTGCATCTGCTTCTGAATCTGATTCTTTCATGTCTGACGATACTCAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATCGCCACCCCAAGTTCCGTGGAGTCCGCAGCCGAAGTGGCAAATGGGTCTCTGAAATCCGCCAGCCTCGACAGACCACTCGCATTTGGCTTGGCACCTACCCTACTCCTGACATGGCTGCAGCCGCCTACGACGTAGCTGCCCTCGCCCTTAAAGGCCCTGATGCCTCTCTTAATTTCCCAGACGCTCTCTTATCCTATCGCATTCCTTCCTCCACTTCCCCTTCTGATATCCGCGCCGCTGCTGCTCTTGCCGCTGCTGCCAGACACCCCGACACTGCTCCTGCTCCTGCTCCTGCTGCACATACCCGCCCTGTTGGTGGGGCAGGGTTTTCCTCTGACGCTACGGCCGCCGCCGCTGCCGCCCGGGAGTTCGTGGACGAGGAAGAGCTACTGAACATGCCCAATTTACTGGTGGACATGGCTGAGGGAATGCTGGTGAGTCCACCACGGATCAAGTCGCTCTCTTCCGATGACTCTCCCACAAATTCTCCAGGGGATGGATTATGGAGCTACTCCCAATAA

mRNA sequence

ATGCGTGTGGCTTCTCACTCAAAGCTCTGGGAATGTTGTCCACGAATTCCCCACGGCTTTTACAGCTCTTCCCCCTTTTCCTTTATAAACTCTTCTCTGTTTCTTCCCCATTTCATTGCATCTGCTTCTGAATCTGATTCTTTCATGTCTGACGATACTCAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATCGCCACCCCAAGTTCCGTGGAGTCCGCAGCCGAAGTGGCAAATGGGTCTCTGAAATCCGCCAGCCTCGACAGACCACTCGCATTTGGCTTGGCACCTACCCTACTCCTGACATGGCTGCAGCCGCCTACGACGTAGCTGCCCTCGCCCTTAAAGGCCCTGATGCCTCTCTTAATTTCCCAGACGCTCTCTTATCCTATCGCATTCCTTCCTCCACTTCCCCTTCTGATATCCGCGCCGCTGCTGCTCTTGCCGCTGCTGCCAGACACCCCGACACTGCTCCTGCTCCTGCTCCTGCTGCACATACCCGCCCTGTTGGTGGGGCAGGGTTTTCCTCTGACGCTACGGCCGCCGCCGCTGCCGCCCGGGAGTTCGTGGACGAGGAAGAGCTACTGAACATGCCCAATTTACTGGTGGACATGGCTGAGGGAATGCTGGTGAGTCCACCACGGATCAAGTCGCTCTCTTCCGATGACTCTCCCACAAATTCTCCAGGGGATGGATTATGGAGCTACTCCCAATAA

Coding sequence (CDS)

ATGCGTGTGGCTTCTCACTCAAAGCTCTGGGAATGTTGTCCACGAATTCCCCACGGCTTTTACAGCTCTTCCCCCTTTTCCTTTATAAACTCTTCTCTGTTTCTTCCCCATTTCATTGCATCTGCTTCTGAATCTGATTCTTTCATGTCTGACGATACTCAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAATCGCCACCCCAAGTTCCGTGGAGTCCGCAGCCGAAGTGGCAAATGGGTCTCTGAAATCCGCCAGCCTCGACAGACCACTCGCATTTGGCTTGGCACCTACCCTACTCCTGACATGGCTGCAGCCGCCTACGACGTAGCTGCCCTCGCCCTTAAAGGCCCTGATGCCTCTCTTAATTTCCCAGACGCTCTCTTATCCTATCGCATTCCTTCCTCCACTTCCCCTTCTGATATCCGCGCCGCTGCTGCTCTTGCCGCTGCTGCCAGACACCCCGACACTGCTCCTGCTCCTGCTCCTGCTGCACATACCCGCCCTGTTGGTGGGGCAGGGTTTTCCTCTGACGCTACGGCCGCCGCCGCTGCCGCCCGGGAGTTCGTGGACGAGGAAGAGCTACTGAACATGCCCAATTTACTGGTGGACATGGCTGAGGGAATGCTGGTGAGTCCACCACGGATCAAGTCGCTCTCTTCCGATGACTCTCCCACAAATTCTCCAGGGGATGGATTATGGAGCTACTCCCAATAA

Protein sequence

MRVASHSKLWECCPRIPHGFYSSSPFSFINSSLFLPHFIASASESDSFMSDDTQSSSSSSSSSSNRHPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPDALLSYRIPSSTSPSDIRAAAALAAAARHPDTAPAPAPAAHTRPVGGAGFSSDATAAAAAAREFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYSQ

Homology

[Close]

BLAST of Carg26814 vs. NCBI nr
Match: XP_022945058.1 (ethylene-responsive transcription factor ERF027-like [Cucurbita moschata])

HSP 1 Score: 334.3 bits (856), Expect = 3.3e-88
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MRVASHSKLWECCPRIPHGFYSSSPFSFINSSLFLPHFIASASESDSXXXXXXXXXXXXX 60
           MRVASHSKLWECCPRIPHGFYSSSPFSFINSSLFLPHFIASASESDSXXXXXXXXXXXXX
Sbjct: 1   MRVASHSKLWECCPRIPHGFYSSSPFSFINSSLFLPHFIASASESDSXXXXXXXXXXXXX 60

Query: 61  XXXXXXHPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDA 120
           XXXXXXHPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDA
Sbjct: 61  XXXXXXHPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDA 120

Query: 121 SLNFPDALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           SLNFPDALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 SLNFPDALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXREFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYSQ 239
           XXXXXXREFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYSQ
Sbjct: 181 XXXXXXREFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYSQ 238

[Close]

BLAST of Carg26814 vs. NCBI nr
Match: XP_022968030.1 (ethylene-responsive transcription factor ERF027-like [Cucurbita maxima])

HSP 1 Score: 251.5 bits (641), Expect = 2.8e-63
Identity = 205/219 (93.61%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 25  PFSFINSSLFLPHFIASASE----SDSXXXXXXXXXXXXXXXXXXXHPKFRGVRSRSGKW 84
           PFSFINSSLF PHFIASASE       XXXXXXXXXXXXXXXXXXXHPKFRGVRSRSGKW
Sbjct: 51  PFSFINSSLFFPHFIASASEFXXXXXXXXXXXXXXXXXXXXXXXXXHPKFRGVRSRSGKW 110

Query: 85  VSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPDALLSYRIPSSTSPS 144
           VSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD+LLSY IPSSTSPS
Sbjct: 111 VSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPDSLLSYHIPSSTSPS 170

Query: 145 DI--RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREFVDEEELLNM 204
           DI   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EFVDEEELLNM
Sbjct: 171 DIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFVDEEELLNM 230

Query: 205 PNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYS 238
           PNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYS
Sbjct: 231 PNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYS 269

[Close]

BLAST of Carg26814 vs. NCBI nr
Match: XP_023542005.1 (ethylene-responsive transcription factor ERF025 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 4.2e-59
Identity = 167/172 (97.09%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 67  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 126
           HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD
Sbjct: 20  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 79

Query: 127 ALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           ALLSYRIPSSTSPSDIR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 80  ALLSYRIPSSTSPSDIRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-- 139

Query: 187 REFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYSQ 239
            EFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYSQ
Sbjct: 140 -EFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYSQ 188

[Close]

BLAST of Carg26814 vs. NCBI nr
Match: APQ47323.1 (AP2/ERF domain-containing transcription factor [Vernicia montana] >APQ47406.1 AP2/ERF domain-containing transcription factor [Vernicia fordii])

HSP 1 Score: 193.4 bits (490), Expect = 9.1e-46
Identity = 99/170 (58.24%), Postives = 115/170 (67.65%), Query Frame = 0


Query: 67  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 126
           HP +RG+RSRSGKWVSEIR+PR+TTRIWLGTYPTP+MAAAAYDVAALALKGPD +LNFP 
Sbjct: 73  HPTYRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTALNFPQ 132

Query: 127 ALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           ++LSY IP+S S SDIR                                           
Sbjct: 133 SILSYPIPASMSASDIRAAAATAATGKQLKPESGSNPDAGRSEEVVEEKSLSSSNRVESS 192

Query: 187 REFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSY 237
           +EF+DEE++LN+PNLLVDMAEGMLVSPPRI + SSDDS  NS  +GLWSY
Sbjct: 193 QEFIDEEDILNLPNLLVDMAEGMLVSPPRINTPSSDDSAGNSDAEGLWSY 242

[Close]

BLAST of Carg26814 vs. NCBI nr
Match: XP_004140856.1 (PREDICTED: ethylene-responsive transcription factor ERF025 [Cucumis sativus] >KGN57338.1 hypothetical protein Csa_3G180265 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 8.5e-44
Identity = 138/178 (77.53%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 67  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 126
           H  FRG+RSRSGKWVSEIR+PR+ TRIWLGTYPTP+MAAAAYDVAAL LKGP+ASLNFP 
Sbjct: 15  HRIFRGIRSRSGKWVSEIREPRKATRIWLGTYPTPEMAAAAYDVAALTLKGPNASLNFPH 74

Query: 127 ALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           +LLSY IP STSPSDIR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           
Sbjct: 75  SLLSYPIPPSTSPSDIRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGGGPSSHAT 134

Query: 187 RE----FVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDD-SPTNSPG-DGLWSYSQ 239
            +    FVDEEELLNMPNLLVDMA+GMLVSPPR+KS SSDD SP +S G DGLWSYS+
Sbjct: 135 GDCSGKFVDEEELLNMPNLLVDMAKGMLVSPPRMKSPSSDDNSPNHSQGDDGLWSYSK 192

[Close]

BLAST of Carg26814 vs. TAIR10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-39
Identity = 90/172 (52.33%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 67  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 126
           H  FRG+R R+GKWVSEIR+PR+TTRIWLGTYP P+MAAAAYDVAALALKGPDA LNFP 
Sbjct: 62  HSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPG 121

Query: 127 ALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
             L+Y  P S S +DIR                                           
Sbjct: 122 LALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVSCNSCSL- 181

Query: 187 REFVDEEELLNMPNLLVDMAEGMLVSPPR--IKSLSSDDSPTNSPGDGLWSY 237
            EF+DEE +LNMP LL +MAEGML+SPPR  I     DDSP N  GD LWSY
Sbjct: 182 -EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSY 231

[Close]

BLAST of Carg26814 vs. TAIR10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 149.4 bits (376), Expect = 2.7e-36
Identity = 111/176 (63.07%), Postives = 129/176 (73.30%), Query Frame = 0


Query: 68  PKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPDA 127
           P +RG+R RSGKWVSEIR+PR+TTRIWLGTYP  +MAAAAYDVAA+ALKG +A LNFP +
Sbjct: 17  PVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGS 76

Query: 128 LLSYRIPSSTSPSDI------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 187
           + SY +P STS +DI       XXXXXXXXXXXXXXXXXXXXXXXXXX            
Sbjct: 77  VGSYPVPESTSAADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARECHVDNDVGS 136

Query: 188 XXXXXREFVDEEELLNMPNLLVDMAEGMLVSPPR-IKSLSSDDSPTNSPGDGLWSY 237
                 EF+DEEE+LNMPNLL +MAEGM+V+PP  + S  SDDSP NS  + LW Y
Sbjct: 137 SSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSNDEDLWGY 192

[Close]

BLAST of Carg26814 vs. TAIR10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-27
Identity = 89/174 (51.15%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 67  HPKFRGVRSR--SGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNF 126
           HP +RGVR R  S KWVSEIR+PR+  RIWLGT+ TP+MAA AYDVAALALKG  A LNF
Sbjct: 12  HPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNF 71

Query: 127 PDALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           P+++ S   P+S SP+DI+  XXXXXXXXXXXXXXXX                       
Sbjct: 72  PNSVSSLPAPTSMSPADIQ--XXXXXXXXXXXXXXXXIVMANNNSQTSGVACMNSSYDNT 131

Query: 187 XXREFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPG--DGLWSY 237
               F+DE+ + +MPN+L++MAEGML+SPPR     +       PG  D LW++
Sbjct: 132 NMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWNF 183

[Close]

BLAST of Carg26814 vs. TAIR10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1)

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-24
Identity = 71/174 (40.80%), Postives = 89/174 (51.15%), Query Frame = 0


Query: 67  HPKFRGVRSR-SGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFP 126
           HP +RGVR R SGKWVSE+R+P + TRIWLGT+ T +MAA A+DVAALAL+G  A LNF 
Sbjct: 45  HPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFA 104

Query: 127 DALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           D+    RIP ST   DI+                                          
Sbjct: 105 DSAWRLRIPESTCAKDIQ-KAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSE 164

Query: 187 XREFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDG---LWSY 237
              ++DEE +  MP LL +MAEGML+ PP ++   + D      GDG   LWSY
Sbjct: 165 GAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYD----GEGDGDVSLWSY 213

[Close]

BLAST of Carg26814 vs. TAIR10
Match: AT5G51990.1 (C-repeat-binding factor 4)

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-23
Identity = 76/224 (33.93%), Postives = 103/224 (45.98%), Query Frame = 0


Query: 20  FYSSSPFSFINSSLFLPHFIASASESDSXXXXXXXXXXXXXXXXXXXHPKFRGVRSR-SG 79
           FYS+ P SF++ S        S+  S                     HP +RGVR R SG
Sbjct: 4   FYSTFPDSFLSISDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSG 63

Query: 80  KWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPDALLSYRIPSSTS 139
           KWV E+R+P + +RIWLGT+PT +MAA A+DVAALAL+G  A LNF D+    RIP +T 
Sbjct: 64  KWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTC 123

Query: 140 PSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRE---FVDEEEL 199
           P +I+                                                ++D+E L
Sbjct: 124 PKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEAL 183

Query: 200 LNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGD-GLWSYSQ 239
           L MPN   +MAEGML+ PP +    +D    +  GD  LWS+ +
Sbjct: 184 LGMPNFFENMAEGMLLPPPEVGWNHND---FDGVGDVSLWSFDE 224

[Close]

BLAST of Carg26814 vs. Swiss-Prot
Match: sp|Q9CAN9|ERF26_ARATH (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-39
Identity = 105/170 (61.76%), Postives = 121/170 (71.18%), Query Frame = 0


Query: 67  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 126
           +P +RG+R RSGKWVSEIR+P++TTR+WLGTYPTP+MAAAAYDVAALALKG D  LNFPD
Sbjct: 87  NPVYRGIRCRSGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNFPD 146

Query: 127 ALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           +L SY IP S+S + IR XXXXXXXXXXXXXXX                           
Sbjct: 147 SLGSYPIPLSSSAAHIRCXXXXXXXXXXXXXXXVKVGQKKEDKVYDTAESSTMG------ 206

Query: 187 REFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSY 237
             FVDEEELLNMP LL DMA+GM+V+PP + S  SDDSP NS G+ LWSY
Sbjct: 207 --FVDEEELLNMPGLLADMAKGMMVAPPWMGSPPSDDSPENSDGESLWSY 248

[Close]

BLAST of Carg26814 vs. Swiss-Prot
Match: sp|Q9FJ90|ERF25_ARATH (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 GN=ERF025 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.6e-38
Identity = 90/172 (52.33%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 67  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 126
           H  FRG+R R+GKWVSEIR+PR+TTRIWLGTYP P+MAAAAYDVAALALKGPDA LNFP 
Sbjct: 62  HSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPG 121

Query: 127 ALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
             L+Y  P S S +DIR                                           
Sbjct: 122 LALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVSCNSCSL- 181

Query: 187 REFVDEEELLNMPNLLVDMAEGMLVSPPR--IKSLSSDDSPTNSPGDGLWSY 237
            EF+DEE +LNMP LL +MAEGML+SPPR  I     DDSP N  GD LWSY
Sbjct: 182 -EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSY 231

[Close]

BLAST of Carg26814 vs. Swiss-Prot
Match: sp|Q38Q39|ERF27_ARATH (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.9e-35
Identity = 111/176 (63.07%), Postives = 129/176 (73.30%), Query Frame = 0


Query: 68  PKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPDA 127
           P +RG+R RSGKWVSEIR+PR+TTRIWLGTYP  +MAAAAYDVAA+ALKG +A LNFP +
Sbjct: 17  PVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGS 76

Query: 128 LLSYRIPSSTSPSDI------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 187
           + SY +P STS +DI       XXXXXXXXXXXXXXXXXXXXXXXXXX            
Sbjct: 77  VGSYPVPESTSAADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARECHVDNDVGS 136

Query: 188 XXXXXREFVDEEELLNMPNLLVDMAEGMLVSPPR-IKSLSSDDSPTNSPGDGLWSY 237
                 EF+DEEE+LNMPNLL +MAEGM+V+PP  + S  SDDSP NS  + LW Y
Sbjct: 137 SSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSNDEDLWGY 192

[Close]

BLAST of Carg26814 vs. Swiss-Prot
Match: sp|Q9SJR0|ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-26
Identity = 89/174 (51.15%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 67  HPKFRGVRSR--SGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNF 126
           HP +RGVR R  S KWVSEIR+PR+  RIWLGT+ TP+MAA AYDVAALALKG  A LNF
Sbjct: 12  HPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNF 71

Query: 127 PDALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           P+++ S   P+S SP+DI+  XXXXXXXXXXXXXXXX                       
Sbjct: 72  PNSVSSLPAPTSMSPADIQ--XXXXXXXXXXXXXXXXIVMANNNSQTSGVACMNSSYDNT 131

Query: 187 XXREFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPG--DGLWSY 237
               F+DE+ + +MPN+L++MAEGML+SPPR     +       PG  D LW++
Sbjct: 132 NMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWNF 183

[Close]

BLAST of Carg26814 vs. Swiss-Prot
Match: sp|P93835|DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 4.3e-23
Identity = 71/174 (40.80%), Postives = 89/174 (51.15%), Query Frame = 0


Query: 67  HPKFRGVRSR-SGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFP 126
           HP +RGVR R SGKWVSE+R+P + TRIWLGT+ T +MAA A+DVAALAL+G  A LNF 
Sbjct: 45  HPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFA 104

Query: 127 DALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           D+    RIP ST   DI+                                          
Sbjct: 105 DSAWRLRIPESTCAKDIQ-KAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSE 164

Query: 187 XREFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDG---LWSY 237
              ++DEE +  MP LL +MAEGML+ PP ++   + D      GDG   LWSY
Sbjct: 165 GAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYD----GEGDGDVSLWSY 213

[Close]

BLAST of Carg26814 vs. TrEMBL
Match: tr|A0A1L6CAW2|A0A1L6CAW2_9ROSI (AP2/ERF domain-containing transcription factor OS=Vernicia montana OX=316732 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.0e-46
Identity = 99/170 (58.24%), Postives = 115/170 (67.65%), Query Frame = 0


Query: 67  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 126
           HP +RG+RSRSGKWVSEIR+PR+TTRIWLGTYPTP+MAAAAYDVAALALKGPD +LNFP 
Sbjct: 73  HPTYRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTALNFPQ 132

Query: 127 ALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           ++LSY IP+S S SDIR                                           
Sbjct: 133 SILSYPIPASMSASDIRAAAATAATGKQLKPESGSNPDAGRSEEVVEEKSLSSSNRVESS 192

Query: 187 REFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSY 237
           +EF+DEE++LN+PNLLVDMAEGMLVSPPRI + SSDDS  NS  +GLWSY
Sbjct: 193 QEFIDEEDILNLPNLLVDMAEGMLVSPPRINTPSSDDSAGNSDAEGLWSY 242

[Close]

BLAST of Carg26814 vs. TrEMBL
Match: tr|A0A1L6CB44|A0A1L6CB44_VERFO (AP2/ERF domain-containing transcription factor OS=Vernicia fordii OX=73154 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.0e-46
Identity = 99/170 (58.24%), Postives = 115/170 (67.65%), Query Frame = 0


Query: 67  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 126
           HP +RG+RSRSGKWVSEIR+PR+TTRIWLGTYPTP+MAAAAYDVAALALKGPD +LNFP 
Sbjct: 73  HPTYRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTALNFPQ 132

Query: 127 ALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           ++LSY IP+S S SDIR                                           
Sbjct: 133 SILSYPIPASMSASDIRAAAATAATGKQLKPESGSNPDAGRSEEVVEEKSLSSSNRVESS 192

Query: 187 REFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSY 237
           +EF+DEE++LN+PNLLVDMAEGMLVSPPRI + SSDDS  NS  +GLWSY
Sbjct: 193 QEFIDEEDILNLPNLLVDMAEGMLVSPPRINTPSSDDSAGNSDAEGLWSY 242

[Close]

BLAST of Carg26814 vs. TrEMBL
Match: tr|A0A0A0L6E0|A0A0A0L6E0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180265 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.6e-44
Identity = 138/178 (77.53%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 67  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 126
           H  FRG+RSRSGKWVSEIR+PR+ TRIWLGTYPTP+MAAAAYDVAAL LKGP+ASLNFP 
Sbjct: 15  HRIFRGIRSRSGKWVSEIREPRKATRIWLGTYPTPEMAAAAYDVAALTLKGPNASLNFPH 74

Query: 127 ALLSYRIPSSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           +LLSY IP STSPSDIR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           
Sbjct: 75  SLLSYPIPPSTSPSDIRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGGGPSSHAT 134

Query: 187 RE----FVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDD-SPTNSPG-DGLWSYSQ 239
            +    FVDEEELLNMPNLLVDMA+GMLVSPPR+KS SSDD SP +S G DGLWSYS+
Sbjct: 135 GDCSGKFVDEEELLNMPNLLVDMAKGMLVSPPRMKSPSSDDNSPNHSQGDDGLWSYSK 192

[Close]

BLAST of Carg26814 vs. TrEMBL
Match: tr|A0A1S3AYS1|A0A1S3AYS1_CUCME (ethylene-responsive transcription factor ERF027 OS=Cucumis melo OX=3656 GN=LOC103484042 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.1e-43
Identity = 134/186 (72.04%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 67  HPKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPD 126
           H  FRG+RSRSGKWVSEIR+PR+ TRIWLGTYPTP+MAAAAYDVAAL LKGP+ASLNFP 
Sbjct: 17  HRIFRGIRSRSGKWVSEIREPRKATRIWLGTYPTPEMAAAAYDVAALTLKGPNASLNFPH 76

Query: 127 ALLSYRIPSSTSPSDIR------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           +LLSY IP STSPSDIR            XXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 77  SLLSYPIPPSTSPSDIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIDG 136

Query: 187 XXXXXXXXXXXXREFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDD-SPTNSPG-DG 239
                        +FVDEEELLNMPNLLVDMAEGMLVSPPR+KS SSDD SP +S G DG
Sbjct: 137 GGPSSHATGDCSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDNSPNHSQGDDG 196

[Close]

BLAST of Carg26814 vs. TrEMBL
Match: tr|A0A2I4FGI3|A0A2I4FGI3_9ROSI (ethylene-responsive transcription factor ERF027-like OS=Juglans regia OX=51240 GN=LOC108998614 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.8e-43
Identity = 102/171 (59.65%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 68  PKFRGVRSRSGKWVSEIRQPRQTTRIWLGTYPTPDMAAAAYDVAALALKGPDASLNFPDA 127
           PK+RGVRSRSGKWVSEIR+PR+TTRIWLGTYP+P+MAAAAYDVAALALKGPDASLNFP++
Sbjct: 76  PKYRGVRSRSGKWVSEIREPRKTTRIWLGTYPSPEMAAAAYDVAALALKGPDASLNFPNS 135

Query: 128 LLSYRIPSSTSPSDIR-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 187
           +LSY IP+STS SDI+                                            
Sbjct: 136 ILSYPIPASTSGSDIQAAAARAAEAIARKPETSESTGGKQETKPSENKDTTISSSSTQVG 195

Query: 188 REFVDEEELLNMPNLLVDMAEGMLVSPPRIKSLSSDDSPTNSPGDGLWSYS 238
            E++DEE LLNMPNLLVDMAEGMLVSPPRI+S SSDD    S G+ LWSYS
Sbjct: 196 EEYIDEEALLNMPNLLVDMAEGMLVSPPRIESKSSDD----SDGEDLWSYS 242

The following BLAST results are available for this feature:

BLAST of Carg26814 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945058.1	3.3e-88	100.00	ethylene-responsive transcription factor ERF027-like [Cucurbita moschata]	[more]
XP_022968030.1	2.8e-63	93.61	ethylene-responsive transcription factor ERF027-like [Cucurbita maxima]	[more]
XP_023542005.1	4.2e-59	97.09	ethylene-responsive transcription factor ERF025 [Cucurbita pepo subsp. pepo]	[more]
APQ47323.1	9.1e-46	58.24	AP2/ERF domain-containing transcription factor [Vernicia montana] >APQ47406.1 AP...	[more]
XP_004140856.1	8.5e-44	77.53	PREDICTED: ethylene-responsive transcription factor ERF025 [Cucumis sativus] >KG...	[more]

BLAST of Carg26814 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52020.1	2.0e-39	52.33	Integrase-type DNA-binding superfamily protein	[more]
AT1G12630.1	2.7e-36	63.07	Integrase-type DNA-binding superfamily protein	[more]
AT2G36450.1	1.0e-27	51.15	Integrase-type DNA-binding superfamily protein	[more]
AT4G25490.1	2.4e-24	40.80	C-repeat/DRE binding factor 1	[more]
AT5G51990.1	1.6e-23	33.93	C-repeat-binding factor 4	[more]

BLAST of Carg26814 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CAN9\|ERF26_ARATH	1.5e-39	61.76	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9FJ90\|ERF25_ARATH	3.6e-38	52.33	Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q38Q39\|ERF27_ARATH	4.9e-35	63.07	Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9SJR0\|ERF24_ARATH	1.9e-26	51.15	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|P93835\|DRE1B_ARATH	4.3e-23	40.80	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Carg26814 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1L6CAW2\|A0A1L6CAW2_9ROSI	6.0e-46	58.24	AP2/ERF domain-containing transcription factor OS=Vernicia montana OX=316732 PE=...	[more]
tr\|A0A1L6CB44\|A0A1L6CB44_VERFO	6.0e-46	58.24	AP2/ERF domain-containing transcription factor OS=Vernicia fordii OX=73154 PE=2 ...	[more]
tr\|A0A0A0L6E0\|A0A0A0L6E0_CUCSA	5.6e-44	77.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180265 PE=4 SV=1	[more]
tr\|A0A1S3AYS1\|A0A1S3AYS1_CUCME	2.1e-43	72.04	ethylene-responsive transcription factor ERF027 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2I4FGI3\|A0A2I4FGI3_9ROSI	2.8e-43	59.65	ethylene-responsive transcription factor ERF027-like OS=Juglans regia OX=51240 G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26814-RA	Carg26814-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 107..127 score: 54.03 coord: 70..81 score: 39.7
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 69..131 e-value: 1.1E-27 score: 108.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 68..117 e-value: 1.2E-9 score: 38.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 69..125 score: 19.757
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 68..127 e-value: 2.84284E-17 score: 72.3043
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 68..127 e-value: 3.4E-24 score: 86.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..238
None	No IPR available	PANTHER	PTHR31985:SF75	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF027	coord: 48..236
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 48..236
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 69..126

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26814	Cla006211	Watermelon (97103) v1	carwmB0009
Carg26814	MELO3C006870	Melon (DHL92) v3.5.1	carmeB0005
Carg26814	CSPI03G16560	Wild cucumber (PI 183967)	carcpiB0007
Carg26814	Cucsa.251020	Cucumber (Gy14) v1	carcgyB0006
Carg26814	CmaCh18G012180	Cucurbita maxima (Rimu)	carcmaB0011
Carg26814	CmoCh18G012390	Cucurbita moschata (Rifu)	carcmoB0011
Carg26814	Cp4.1LG09g01060	Cucurbita pepo (Zucchini)	carcpeB0008
Carg26814	CsGy3G016680	Cucumber (Gy14) v2	carcgybB0006
Carg26814	MELO3C006870.2	Melon (DHL92) v3.6.1	carmedB0006
Carg26814	CsaV3_3G016770	Cucumber (Chinese Long) v3	carcucB0007
Carg26814	Cla97C05G089740	Watermelon (97103) v2	carwmbB0006

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26814	Cucurbita pepo (Zucchini)	carcpeB0009
Carg26814	Cucumber (Chinese Long) v2	carcuB0007
Carg26814	Bottle gourd (USVL1VR-Ls)	carlsiB006
Carg26814	Watermelon (Charleston Gray)	carwcgB0007
Carg26814	Wax gourd	carwgoB0008
Carg26814	Silver-seed gourd	carcarB005
Carg26814	Cucurbita maxima (Rimu)	carcmaB0010
Carg26814	Cucurbita moschata (Rifu)	carcmoB0010