Carg26766 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26766
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cucurbita_argyrosperma_scaffold_281 : 111993 .. 118629 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTTCGGCCCATTTGGATATTTCTCCTCTATTAATCGGGGGGGAATTCTACTCCTTACAATTTTGACGTCTCTGAAAACTCGAGAAGAAGCTAAAATCCTAGAAAATGGCCACCGGGATGAAGCTCCCCATGGCTGTTAGCTTGCAGAAACCCATGGCTATGGCGGTTCCATCTTCCTCATCTCGTCTCCCTAGAGGGATCAATTTCAGGACTTGTTGCAGCATGAACGCTACAAGTAAAGCGAAAATCCCTTTACCTCCGATAAACCCAAAGGATCCATTTCTTTCGAAGCTCGCTTCAGTAGCTTCAACCTCACCTGAAACGTTGCTAAGCCGCCCTGGAAATTCCGATTCTCTTCCATATTTGGATATTTTTGATTCTCCTCAGCTCATGGCTGCGCCTGCCCAAGTAAGTAAGCTGTCCCTCGCTTATTGTTCTTGCTGGTGTTTATATGATTTTCTGTTTGGAAACGGAGTTTTATTTAGATTAAGTTGTAGTAATTTGAATTAAGTTTTGTTTGGTAGCTAATGTTGTGAATTTGGTGATTTTCTTATTGGATAAGGTCGAAAGATCAGTTTCCTACAACGAGCATAGGTCGAGGAGGCCTCCGCCTGACTTGCCGTCTCTGTTACTTCATGGAAGAATTGTTTACATCGGGATGCCTGTAAGTGATTGAATTAGTGTTACTGCTGTGCTATACGTTTTAACTTGTTTTTCGAGGAACTATTCAACTAATATTAAGGGGGAATTTACCACGATTTTTTCAATATCTTATAGTCGAGTAGTTACATTGAATGAAAAAAATGAAGCATGTTCTTTAAAATTGTATAAAATCTAAACGTTTTAACTAATGCACGCTGTAATGGTGCCTCTCATAATTGCATATCGTATATCTTTAGAGGCCTACAGAGTGTAGGAAATTGTAGTTCAAGAATGAGTGATGTTAAGCTTTTTCACGAACCTTGTTGATTGAACTGAAAGTGTTAATTAAGTTGTGTTGGGGTACTTTGGTATCGTGATCCTATTAAAACAGATTTTATGACCTCATTCAGCTACTGATTTTGAAGCTTAGCAATTTTTTTTTTCAAGCGCTCTATACACTGTAGAATGATTTTCGTTTCTTTCCTCTCGAGTTGCATAAGCCCCTATGAAGTAGCCATTCACAATATAAGTGTAACATGGTTTTTTTTCTAAGGCATAATTGATTCTAAATGGTTTAGAAACTATTGTGTCAACGTTCTGAGCAGTTTTTAACTGTCTTTTAAAAGAAGCTTTCAGCTACTTGCGTAGAGAATACCATAGTATCTGATCCCTCTTCATTCAATCATTTCTACTCTCAGTTGGTTCCAGCTGTCACGGAGCTAGTTATTGCTCAACTGATGTACTTGCAATGGATGGATCCAAAAGAACCAATATATATTTATATAAACTCCTCAGGAACAACTCGTGATGATGGTGAAACTGTAAGCTTTGAAATTATTCAGCTACATGAAACGAGTCAAATTAAGATGTTAAAAGCATGCATATCTTCTTCTTGCTTTATAAAATCTTCTGCCTGCCGTTAGGAATTTCAGGGTTTGTATTCAGACTATGTCTTACTCATATGTCTGTGTTCACATGCTTATTGTTAAAGTATTTATTTAAGTTTAAATTTACCTAAGTATTACCTTGACATCAAAGAAGATTTCGATCTGATGCTTTATTTTTGTCCTAGTTGATTCTGATTTGACATTAGAAGTATATTCTTTTTTTTTTTTCCCCAATAACCAAATAATTGTCTGTAGATACGAATATTTGATATGATTCCATCCTTAAATTTTCTTCCCTATCAACATAAGTTTTTGGGTTCAGTGGTAACTTAACATAGTATGAGAGGTGGAAGTCTCTCGTTCAAATCCCTATATTGTCAAGTCCTCCCCATCTCATTTTGATTTCTGCTTGTTGGGTCTTTTAAAAAATTTTCAGGTCCACAAGTGAGGGAAGTGTTAAAGCATTCATTTTGTTCTCCATTCAAAATCAAGAAAAAAAATCTTTTAAACTTTATATTATTCCTCTCTCCAGATGAGATTGTAGCGCTCTTCTTTAGCTTGGCCAAAAGTTTGCTTGCTTGATTGGAGCCATATTTTGTAGCTTGGCTCCTTTTGGGCTGGTTTTTTTGAATTCCCTTTATAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAATGACGGTTCAATCTTTATATGAAAACAATAAAAAATGTGATTGTAGTTTCTAGATTTTGGATTCCTTAAAATTATATTGTAGATATCATATTATTTGAATGTAGACACTTTAAGATATGGCTTCTTGACCTAAAAGGTATGTGTTACTAAATATAGAGTGTGAACACGTGTAAACTGGGATCTACGTTTTGATTCGTGATGTAGCTACCGTAACTGTATGACAGTTAGATGAAATTCAGGTAGATCTTAAACTTCAAACTATAGTGCACCCCAATTAATCACACAAATAAATTAAATTGTACGTGAGATAAAGTAAATGGCGTATACATAAGACTATCAAATTACACAAACCTACATGTAGACACATGTAATAACCTAGATATCATATTTTGTTCTGCTGAGTACATCCCTACAAATCAATTATGCATCTAACAGATGAGAGCCTGTGTCTTATTCGCGAGCCTACTGCTATCTGGGATACCATGTGTAATAGTCTTTCATAAATAAGATCTGGATCATCAAGATATAGATTTTTCATGACATTATCCGAGTATGTAGAACAGAGATATTTTCGACTTGCTAGACAATTTTTATGGTTACACGTCATAACATCTGATGTTTCACTATGAAATGCATGTGAGATAATGCGAGAGGTGTGTCTATCTCGTTTCAACTAGCTAGGCTTATCTAATGATTGGTATGGTATAATGCTGCCATGTGGTACAAAGATGAGTCTATGTAAAATAACATGTTGGAATAAGATCTGTTCATGAAAAGATATAGATTTCTTCATGATTCTCCGCAGCTATCGGGAACAGACTGAAGCATGTAAATGGGTCTACTCCTGAGTCATAGAACATAAAAAAATAGAATTGGATCTTATGCTTTGAACACTCCCCTGCAATATCTTATGATAGATCACCTGTCACAATCACTTGAAAATTTATAATGCTTTTACATGAATATCGCTAAAATATGAAAAGCCTTATATCTTGTTCGGTCTGGAATGGCATTTCTGTTACACTAGCTATCATTATTAATTCAACATAATTAAGTGTTACGCAATTGGCTTTCAAGGTTGCGATTGACGACTAGCTGATGTGTGGTTTTGTGCTGAGATACTTGAATATATTGCGTTATGTTATAAGCAGTAGAAACACAAATGCCAAACACGCAGAGGTGTCGTAGAATATTCCTATAGAGCGAAATATCGAGTCGTTATCATTGGTGTCCTATGAGCATCATTTCCTTTGTATGATGGATAAGATGAAGCACTGAGAGTGAAATTTGTTGAGGAGTCTGGGAATGTACTCACTTGGTTGATCCAACTCATCCATAACTATGTATAAGTTACCACTGGAACCCAAATTAGTTTGATTAGGGATAATTTAAGGATGGAATCCTATCAAATGATTCGTATTCTACAGACAATTATTTTGGTTATGGGGGAAAAAAAAAAAAGAATATCTTCAATAATGTCCAAATCAGAATCAAACTTAGGACAAAAGATTAAAGCATAGATCGAAATTTCATTGATGTCAAGGTAATACTTAGGTAAATTTACTTAAATAAAAATACTTTAAAAATAAGCATGTATGAACACAAACAATATAGTAAGACATACTGAATACAAACCCTGAAATTTCACTAACGAGACTAGGCAGAAGATTGTTAATAAAAGCAAAGAAGAGATATGCAAGCACTTTATAACATCTTATTTGAACTTCAGTTTCAATGTAAAGCTGGAATAATTTCAAAGCTTACAGGTTTCACAAACAATCATCAACGAGTTGTTCCTGCAGGATTTATGATATATATATTGGTTCTTTGGTCCATCCATTGGCAAGTACATCAGTTTGAGCAATAACTAGCTCCGTGACAGCTGAGAACGGCACTGAGGTAGAAATGATTGGAATGAAGAGGATCAGATACTATGGTAATTCTCTACGCCAAGTAGCTGAAAAAGCTTCTTATAAAAGAAAGTTAAAAACTGCTCAGAAGTTGAACACATATAGTTTCCTAACCATTTGAATCAATTATCTAGAAAAAAAACCATTTACACTATATTGTGAATGGCTTACTTCATAGGGCTTTGCAACTCGAGAGGAAAGAAACGGAAACATCATCTACAGTGTATAGAGCGCTTGAAAAAAAATTGCTAAGTTCAAAATCAGTAGCTGGAAATTGAAGGTCATAAACATCTGTTTTAATAGGATCACGATACCAAAGTACCCCAACACAATTAATTAACACTTTCAAGTTCAAATCAACAAGAGGGGGTCTTCGTGAAAGCTTAACATCACTCATTCTTGAACTAAATTCCATACACTCTGTAGCTCTAAAAGATATACGATATGCAATTTATGAGGAGGCACCATTACAGCGTGCATTAGTTAAAAGTTTAGATTTTTTACAATTTTAAAGAAACATGTATCTTAGTGTAAGTTATCACTGCACCTAGGGTAGGGACTCTCTGGTCATGTCCATTGTTTTCATGAAATGGTAGGCACTTGAAATTTCTAGTGTTGTAGGTGCGACAACTGGCCTGAGAAATGACATGCTGATTGACCTCTTTTGCTCCAGACTAATAATTTTAATTTTGTAAAAAAGATTGAAAGAAAATATTTCTGTAATGTAGGTAGTGTCCTTGGAAATAATTATGCTTTTGTTGTTTGAATCTCTTGCTGGTTTTGTGAAAATTTTATCATCTTTCCATTTGTAAAACATGATACCAAATATCTCATACAGATACACACATTGACTGTCGGAGCTGCCATAGGTCAAGCTTGTCTATTGCTTGCTGCAGGAACTAAAGGCAAACGTTTTATGATGCCACATTCCAAAGGTTTGATGCTTTTGGCACGTTACTTTCTGTTTTTGAATTGGTAACTATACTTTCTCGTATAGAATAATCAAATTTTCCCTCGAATTCATTCCAGCCATGATACAGCAGCCTCGTGTCCCTTCATCTGGTTTGATGCCTGCTAGTGACGTTCTGATTCGCGCAAAAGAGGTCCAGATCCTTCTATTGCTTGATAATTTATTTGAAGTAGAACTCAGTTTCTATGACACTGATTTTTGATGGAGCTCTTAGCACTTCGATTCAAGTATTCGAAAAGGAACTATTCAAAGTCTCAATCAAGTAACCACAGTTATTATTATTATTTTTTTTTGCAATGACGATTTGCGCATCGTCATATATCGAGTGAATTGGAATTAACTGGTAGCTTTGTATCTTATTCCCAAAAAATTTCAAGGGAATTTCCCCCTACAAGGATACAAGTTGAGCTTTCTATTTCATCTCGTCTTTCAGGTGATAACAAACAGGGACACACTAGTGGAACTCCTAGCAAAGCACACTGGAAATGTAAGCCTAGACAACATTTGTTTCTACTTTTTTCTATGAACTCCAGACACGACATTCCATATAATTCCTTACACAATCTTAATATTGTCAGTCACTAGAGACAGTAGCTAATGCGATGAAAAGACCATTCTACATGGACGCAATAAAAGCAAAAGAATTTGGAGTTATCGACAAGGTAGATTAACGCACAGATGTTTTTTTGGGTTGTAACACGATGCGCTTGCCTCGTTGCTTATGCCTGTAGATTATAAATCTAAGTTGGCAATATGTCTCCAGATTCTTTGGCGAGGTCAGGAGAAGATTATGGCTGAAGTGGCTTCCCCGGAGGATTGGGACAAAGGAGCTGGCATCAAAGCTGTTGATGAACTCTAAATCCCCTCTCAGATCTACTCTTCATTCATAGCAAGTAAGCCTATTGCTTCTCCTTCTTGCAAACTCAAATGCCTTGTTCTTTTTTTCAGTATTCAACGTACAGATGTGTTATAAAGCCAATATAATTTAATCTTTTGAAGCATGGTTTCATTGGAATTGAAATTTGGGGTAGAATGAGAAGCATAATTTTGTTAGTACAAGGTGTCTCCCATCTCCCTCGGGCATAGATTCGTAATATCATTTAGTTCTTAAAGTGAGGAAATATTTGCTTAGCTCAGTTGAAATCTTTAACAATAATACCATCCCAATTATGTAAAATATGAAGCCTCCTGCAAGTTTTTTGTCCTAAGGGTTCTCTTATTTTCTCTTATTGATGATAGAGACGATATTGATGATAGTGATATTGATCATAGTGGCGATACTGATGATAGCGACGATATCGAACATGACCTTGAAATGGAGCTGGAGTTTCTAACTATGATGAATGTGTCACTAATTATGGATAGTCTGCTGGAAACAGACTAATTTTATATCATCCTTCGATTCAGGTTAGCTAAAGCAATGTCTCTTGCACAATATTGATTTCAAATATACGGTGGAAATTATGGAGACATGTATTTAGACAGTTTTCTAGGTGTTAAATTAGAATTCCCCATTTTCTCCT

mRNA sequence

CAAATTTCGGCCCATTTGGATATTTCTCCTCTATTAATCGGGGGGGAATTCTACTCCTTACAATTTTGACGTCTCTGAAAACTCGAGAAGAAGCTAAAATCCTAGAAAATGGCCACCGGGATGAAGCTCCCCATGGCTGTTAGCTTGCAGAAACCCATGGCTATGGCGGTTCCATCTTCCTCATCTCGTCTCCCTAGAGGGATCAATTTCAGGACTTGTTGCAGCATGAACGCTACAAGTAAAGCGAAAATCCCTTTACCTCCGATAAACCCAAAGGATCCATTTCTTTCGAAGCTCGCTTCAGTAGCTTCAACCTCACCTGAAACGTTGCTAAGCCGCCCTGGAAATTCCGATTCTCTTCCATATTTGGATATTTTTGATTCTCCTCAGCTCATGGCTGCGCCTGCCCAAGTCGAAAGATCAGTTTCCTACAACGAGCATAGGTCGAGGAGGCCTCCGCCTGACTTGCCGTCTCTGTTACTTCATGGAAGAATTGTTTACATCGGGATGCCTTTGGTTCCAGCTGTCACGGAGCTAGTTATTGCTCAACTGATGTACTTGCAATGGATGGATCCAAAAGAACCAATATATATTTATATAAACTCCTCAGGAACAACTCGTGATGATGGTGAAACTATACACACATTGACTGTCGGAGCTGCCATAGGTCAAGCTTGTCTATTGCTTGCTGCAGGAACTAAAGGCAAACGTTTTATGATGCCACATTCCAAAGCCATGATACAGCAGCCTCGTGTCCCTTCATCTGGTTTGATGCCTGCTAGTGACGTTCTGATTCGCGCAAAAGAGGTCCAGATCCTTCTATTGCTTGATAATTTATTTGAAGTAGAACTCAGGAATTTCCCCCTACAAGGATACAAGTTGAGCTTTCTATTTCATCTCGTCTTTCAGGTGATAACAAACAGGGACACACTAGTGGAACTCCTAGCAAAGCACACTGGAAATTCACTAGAGACAGTAGCTAATGCGATGAAAAGACCATTCTACATGGACGCAATAAAAGCAAAAGAATTTGGAGTTATCGACAAGATTCTTTGGCGAGGTCAGGAGAAGATTATGGCTGAAGTGGCTTCCCCGGAGGATTGGGACAAAGGAGCTGGCATCAAAGCTGTTGATGAACTCTAAATCCCCTCTCAGATCTACTCTTCATTCATAGCAAAGACGATATTGATGATAGTGATATTGATCATAGTGGCGATACTGATGATAGCGACGATATCGAACATGACCTTGAAATGGAGCTGGAGTTTCTAACTATGATGAATGTGTCACTAATTATGGATAGTCTGCTGGAAACAGACTAATTTTATATCATCCTTCGATTCAGGTTAGCTAAAGCAATGTCTCTTGCACAATATTGATTTCAAATATACGGTGGAAATTATGGAGACATGTATTTAGACAGTTTTCTAGGTGTTAAATTAGAATTCCCCATTTTCTCCT

Coding sequence (CDS)

ATGGCCACCGGGATGAAGCTCCCCATGGCTGTTAGCTTGCAGAAACCCATGGCTATGGCGGTTCCATCTTCCTCATCTCGTCTCCCTAGAGGGATCAATTTCAGGACTTGTTGCAGCATGAACGCTACAAGTAAAGCGAAAATCCCTTTACCTCCGATAAACCCAAAGGATCCATTTCTTTCGAAGCTCGCTTCAGTAGCTTCAACCTCACCTGAAACGTTGCTAAGCCGCCCTGGAAATTCCGATTCTCTTCCATATTTGGATATTTTTGATTCTCCTCAGCTCATGGCTGCGCCTGCCCAAGTCGAAAGATCAGTTTCCTACAACGAGCATAGGTCGAGGAGGCCTCCGCCTGACTTGCCGTCTCTGTTACTTCATGGAAGAATTGTTTACATCGGGATGCCTTTGGTTCCAGCTGTCACGGAGCTAGTTATTGCTCAACTGATGTACTTGCAATGGATGGATCCAAAAGAACCAATATATATTTATATAAACTCCTCAGGAACAACTCGTGATGATGGTGAAACTATACACACATTGACTGTCGGAGCTGCCATAGGTCAAGCTTGTCTATTGCTTGCTGCAGGAACTAAAGGCAAACGTTTTATGATGCCACATTCCAAAGCCATGATACAGCAGCCTCGTGTCCCTTCATCTGGTTTGATGCCTGCTAGTGACGTTCTGATTCGCGCAAAAGAGGTCCAGATCCTTCTATTGCTTGATAATTTATTTGAAGTAGAACTCAGGAATTTCCCCCTACAAGGATACAAGTTGAGCTTTCTATTTCATCTCGTCTTTCAGGTGATAACAAACAGGGACACACTAGTGGAACTCCTAGCAAAGCACACTGGAAATTCACTAGAGACAGTAGCTAATGCGATGAAAAGACCATTCTACATGGACGCAATAAAAGCAAAAGAATTTGGAGTTATCGACAAGATTCTTTGGCGAGGTCAGGAGAAGATTATGGCTGAAGTGGCTTCCCCGGAGGATTGGGACAAAGGAGCTGGCATCAAAGCTGTTGATGAACTCTAA

Protein sequence

MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETIHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKAVDEL

Homology

[Close]

BLAST of Carg26766 vs. NCBI nr
Match: XP_023545293.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023545294.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023545295.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 580.1 bits (1494), Expect = 5.0e-162
Identity = 309/364 (84.89%), Postives = 310/364 (85.16%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL
Sbjct: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET---- 180
           PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET    
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180

Query: 181 ----------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSG 240
                           IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVELLA 300
           LMPASD+LIRAKE                                  VITNRDTLVELLA
Sbjct: 241 LMPASDILIRAKE----------------------------------VITNRDTLVELLA 300

Query: 301 KHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKA 345
           KHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKA
Sbjct: 301 KHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKA 330

[Close]

BLAST of Carg26766 vs. NCBI nr
Match: XP_022946246.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita moschata] >XP_022946247.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 579.3 bits (1492), Expect = 8.5e-162
Identity = 309/364 (84.89%), Postives = 310/364 (85.16%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL
Sbjct: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET---- 180
           PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET    
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180

Query: 181 ----------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSG 240
                           IHTLTVGAAIGQACLLLAAGTKG+RFMMPHSKAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVELLA 300
           LMPASDVLIRAKE                                  VITNRDTLVELLA
Sbjct: 241 LMPASDVLIRAKE----------------------------------VITNRDTLVELLA 300

Query: 301 KHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKA 345
           KHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKA
Sbjct: 301 KHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKA 330

[Close]

BLAST of Carg26766 vs. NCBI nr
Match: XP_022999027.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Cucurbita maxima] >XP_022999028.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Cucurbita maxima] >XP_022999029.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Cucurbita maxima] >XP_022999030.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 569.3 bits (1466), Expect = 8.8e-159
Identity = 303/364 (83.24%), Postives = 308/364 (84.62%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMAVSLQKPMAMAVPSSSSRLPR INF TCCSM+ATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRRINFSTCCSMSATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           +KLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL
Sbjct: 61  AKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET---- 180
           PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET    
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGETVAME 180

Query: 181 ----------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSG 240
                           IHTLTVGAAIGQACLLLAAGTKG+RFMMPHSKAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTLTVGAAIGQACLLLAAGTKGRRFMMPHSKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVELLA 300
           LMPASD+LIRAKE                                  VITNRDTLVELLA
Sbjct: 241 LMPASDILIRAKE----------------------------------VITNRDTLVELLA 300

Query: 301 KHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKA 345
           KHTGNSLETVANAMKRPFYMDAIKAK+FGVIDKILWRGQEKIMAEVASPEDWDKGAGIKA
Sbjct: 301 KHTGNSLETVANAMKRPFYMDAIKAKQFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKA 330

[Close]

BLAST of Carg26766 vs. NCBI nr
Match: XP_022150809.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Momordica charantia] >XP_022150810.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Momordica charantia])

HSP 1 Score: 517.7 bits (1332), Expect = 3.0e-143
Identity = 273/363 (75.21%), Postives = 293/363 (80.72%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPMA+SLQKPMAMA  SSSS L RG NFRT C  NATSKAKIPLPPINPKDPFL
Sbjct: 1   MATGMKLPMAISLQKPMAMASQSSSSSLARGTNFRTVCCTNATSKAKIPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           SKLASVASTSPETLL+RP NSDS PYLD+FD+PQLMAAPAQVERSVSYNEHR RRPPPDL
Sbjct: 61  SKLASVASTSPETLLNRPSNSDSPPYLDLFDAPQLMAAPAQVERSVSYNEHRPRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET---- 180
           PSLLL+GRIVYIGMPLVPAVTELVIA+LMYLQWMDPKEPIY+YINS+GTTRDDGET    
Sbjct: 121 PSLLLNGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGME 180

Query: 181 ----------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSG 240
                           IHT+ VGAAIGQACLLLAAG++GKRFMMPH+KAMIQQPRVPSSG
Sbjct: 181 TEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSQGKRFMMPHAKAMIQQPRVPSSG 240

Query: 241 LMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVELLA 300
           LMPASDVLIRAKE                                  VITNRDTLV+LLA
Sbjct: 241 LMPASDVLIRAKE----------------------------------VITNRDTLVKLLA 300

Query: 301 KHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKA 344
           KHTGNSLETV+N M+RPFYMD+ +AKEFGVIDKILWRGQEKIMA+VA+PE+WDKGAGIK 
Sbjct: 301 KHTGNSLETVSNVMRRPFYMDSTRAKEFGVIDKILWRGQEKIMADVAAPEEWDKGAGIKV 329

[Close]

BLAST of Carg26766 vs. NCBI nr
Match: XP_008454159.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucumis melo] >XP_008454167.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucumis melo])

HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136
Identity = 265/365 (72.60%), Postives = 286/365 (78.36%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPM--AMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDP 60
           MA GMKLPMAV+LQKPM       SSSS L R INFRT    NATSKAKIP+PPINPKDP
Sbjct: 1   MAIGMKLPMAVTLQKPMXXXXXXXSSSSSLHRAINFRTVSCSNATSKAKIPMPPINPKDP 60

Query: 61  FLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPP 120
           FLSKLASVASTSPETLL+RP NSDS PYLDIFD+P+LMAAPAQVERSVSYNEHR RRPPP
Sbjct: 61  FLSKLASVASTSPETLLNRPENSDSPPYLDIFDAPRLMAAPAQVERSVSYNEHRPRRPPP 120

Query: 121 DLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET-- 180
           DLPSLLLHGRIVYIGMPLVPAVTEL++A+LMYLQWMDPKEPIYIYINS+GTTRDDGET  
Sbjct: 121 DLPSLLLHGRIVYIGMPLVPAVTELIVAELMYLQWMDPKEPIYIYINSTGTTRDDGETIG 180

Query: 181 ------------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPS 240
                             IHT+ VGAAIGQACLLLAAG++G+R+MMPH+KAMIQQPRVPS
Sbjct: 181 METEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSEGRRYMMPHAKAMIQQPRVPS 240

Query: 241 SGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVEL 300
           SGLMPASDVLIRAKE                                  VITNRDTLV+L
Sbjct: 241 SGLMPASDVLIRAKE----------------------------------VITNRDTLVKL 300

Query: 301 LAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGI 344
           LAKHTGNS+ETV+N MKRPFYMDA  AKEFGV+DKILWRGQEKIM+ V +PEDWDKGAGI
Sbjct: 301 LAKHTGNSVETVSNVMKRPFYMDATLAKEFGVVDKILWRGQEKIMSAVVAPEDWDKGAGI 331

[Close]

BLAST of Carg26766 vs. TAIR10
Match: AT1G09130.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein)

HSP 1 Score: 419.1 bits (1076), Expect = 2.7e-117
Identity = 230/362 (63.54%), Postives = 261/362 (72.10%), Query Frame = 0


Query: 9   MAVSLQKPMAMAVPSSSSRLPR---------GINFRTC-CSMNATSKAKIPLPPINPKDP 68
           MA  LQ  M   +P SSS  P            N +T   +  A + AKIP+PPINPKDP
Sbjct: 1   MASCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINPKDP 60

Query: 69  FLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPP 128
           FLS LAS+A+ SPE LL+RP N+D  PYLDIFDSPQLM++PAQVERSV+YNEHR R PPP
Sbjct: 61  FLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPP 120

Query: 129 DLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET-- 188
           DLPS+LL GRIVYIGMPLVPAVTELV+A+LMYLQW+DPKEPIYIYINS+GTTRDDGET  
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180

Query: 189 ------------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPS 248
                             +HT+ VGAAIGQACLLL+AGTKGKRFMMPH+KAMIQQPRVPS
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240

Query: 249 SGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVEL 308
           SGLMPASDVLIRAKE                                  VITNRD LVEL
Sbjct: 241 SGLMPASDVLIRAKE----------------------------------VITNRDILVEL 300

Query: 309 LAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGI 341
           L+KHTGNS+ETVAN M+RP+YMDA KAKEFGVID+ILWRGQEKI+A+V   E++DK AGI
Sbjct: 301 LSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKNAGI 328

[Close]

BLAST of Carg26766 vs. TAIR10
Match: AT1G49970.1 (CLP protease proteolytic subunit 1)

HSP 1 Score: 132.1 bits (331), Expect = 6.5e-31
Identity = 85/222 (38.29%), Postives = 114/222 (51.35%), Query Frame = 0


Query: 114 RRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDD 173
           R  PPDLPSLLL  RI Y+GMP+VPAVTEL++AQ M+L + +P +PIY+YINS GT  + 
Sbjct: 166 RTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEK 225

Query: 174 GET--------------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQ 233
            ET                    ++T+  G A GQA +LL+ G KG R + PHS   +  
Sbjct: 226 METVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYL 285

Query: 234 PRV-PSSGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNR 293
           P+V  SSG   A D+ I+AKE+                                    N 
Sbjct: 286 PKVNRSSG--AAIDMWIKAKELD----------------------------------ANT 345

Query: 294 DTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 315
           +  +ELLAK TG S E +   +KRP Y+ A  A ++G+ DKI
Sbjct: 346 EYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKI 351

[Close]

BLAST of Carg26766 vs. TAIR10
Match: AT4G17040.1 (CLP protease R subunit 4)

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-30
Identity = 85/221 (38.46%), Postives = 117/221 (52.94%), Query Frame = 0


Query: 115 RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRD-- 174
           +PPPDL S L   RIVY+GM LVP+VTEL++A+ +YLQ+ D ++PIY+YINS+GTT++  
Sbjct: 101 QPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGE 160

Query: 175 ----DGET-------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPR 234
               D E              I TL VG A G+A LLL AG KG R  +P S  MI+QP 
Sbjct: 161 KLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPI 220

Query: 235 VPSSGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTL 294
               G   A+DV I  KE++                           H+       +  +
Sbjct: 221 ARFQG--QATDVEIARKEIK---------------------------HI-------KTEM 280

Query: 295 VELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILW 317
           V+L +KH G S E +   MKRP Y    +A E+G+IDK+++
Sbjct: 281 VKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVY 285

[Close]

BLAST of Carg26766 vs. TAIR10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7)

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-21
Identity = 76/239 (31.80%), Postives = 111/239 (46.44%), Query Frame = 0


Query: 110 EHRSR-RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSG 169
           EH SR     D+ S LL  RI+ I  P+    + +V+AQL+YL+  +P +PI++Y+NS G
Sbjct: 38  EHSSRGERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPG 97

Query: 170 -----------TTRDDGETIHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVP 229
                      T +     I T+ +G A   A LLLAAG KG+R  +P++  MI QP   
Sbjct: 98  GHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGG 157

Query: 230 SSGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVE 289
            SG   A D+ I  K                                  Q++   D L E
Sbjct: 158 YSG--QAKDITIHTK----------------------------------QIVRVWDALNE 217

Query: 290 LLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGA 337
           L  KHTG  L+ VAN M R  +M   +AK FG+ID+++     +++ +    E  DK +
Sbjct: 218 LYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDAVGNESKDKSS 240

[Close]

BLAST of Carg26766 vs. TAIR10
Match: AT5G45390.1 (CLP protease P4)

HSP 1 Score: 92.8 bits (229), Expect = 4.4e-19
Identity = 72/232 (31.03%), Postives = 109/232 (46.98%), Query Frame = 0


Query: 95  LMAAPAQVERSVSYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWM 154
           L  A A +E S +  E   R    D+  LLL  RIV++G  +   V + +++QL+ L   
Sbjct: 56  LRFANASIEMSQT-QESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAK 115

Query: 155 DPKEPIYIYINSSGTTRDDGETIH-----------TLTVGAAIGQACLLLAAGTKGKRFM 214
           DPK+ I ++INS G +      I+           T+ +G A   A ++L AGTKGKRF 
Sbjct: 116 DPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFA 175

Query: 215 MPHSKAMIQQPRVPSSGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFH 274
           MP+++ MI QP   +SG   A DV I+AKE                              
Sbjct: 176 MPNTRIMIHQPLGGASG--QAIDVEIQAKE------------------------------ 235

Query: 275 LVFQVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKIL 316
               V+ N++ +  ++A  T  S E V   + R  YM  I+A E+G+ID ++
Sbjct: 236 ----VMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVI 250

[Close]

BLAST of Carg26766 vs. Swiss-Prot
Match: sp|Q8L770|CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 1.7e-116
Identity = 231/363 (63.64%), Postives = 262/363 (72.18%), Query Frame = 0


Query: 9   MAVSLQKPMAMAVPSSSSRLPR---------GINFRTC-CSMNATSKAKIPLPPINPKDP 68
           MA  LQ  M   +P SSS  P            N +T   +  A + AKIP+PPINPKDP
Sbjct: 1   MASCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINPKDP 60

Query: 69  FLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPP 128
           FLS LAS+A+ SPE LL+RP N+D  PYLDIFDSPQLM++PAQVERSV+YNEHR R PPP
Sbjct: 61  FLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPP 120

Query: 129 DLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET-- 188
           DLPS+LL GRIVYIGMPLVPAVTELV+A+LMYLQW+DPKEPIYIYINS+GTTRDDGET  
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180

Query: 189 ------------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPS 248
                             +HT+ VGAAIGQACLLL+AGTKGKRFMMPH+KAMIQQPRVPS
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240

Query: 249 SGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVEL 308
           SGLMPASDVLIRAKE                                  VITNRD LVEL
Sbjct: 241 SGLMPASDVLIRAKE----------------------------------VITNRDILVEL 300

Query: 309 LAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGI 342
           L+KHTGNS+ETVAN M+RP+YMDA KAKEFGVID+ILWRGQEKI+A+V   E++DK AGI
Sbjct: 301 LSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKNAGI 329

[Close]

BLAST of Carg26766 vs. Swiss-Prot
Match: sp|P74466|CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.3e-32
Identity = 86/242 (35.54%), Postives = 129/242 (53.31%), Query Frame = 0


Query: 104 RSVSYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVIAQLMYLQW 163
           +S  Y +   + PPPDL SLLL  RIVY+GMPL  +          VT+L+IAQL+YLQ+
Sbjct: 7   QSSYYGDMAFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQF 66

Query: 164 MDPKEPIYIYINSSGTTRDDGET--------------------IHTLTVGAAIGQACLLL 223
            DP +PIY YINS+GT+   G+                     +HT+ +G A+G A ++L
Sbjct: 67  DDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMIL 126

Query: 224 AAGTKGKRFMMPHSKAMIQQPRVPSSGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPL 283
           ++GTKG R  +PH+  ++ Q R  + G   A+D+ IRAKE                    
Sbjct: 127 SSGTKGYRASLPHATIVLNQNRTGAQG--QATDIQIRAKE-------------------- 186

Query: 284 QGYKLSFLFHLVFQVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDK 316
                         VI+N+ T++E+L+ +TG + E +A  M R FY+   +AKE+G+ID+
Sbjct: 187 --------------VISNKQTMLEILSLNTGQTQEKLAKDMDRTFYLTPAQAKEYGLIDR 212

[Close]

BLAST of Carg26766 vs. Swiss-Prot
Match: sp|Q9L4P4|CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=clpR PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.2e-31
Identity = 85/250 (34.00%), Postives = 127/250 (50.80%), Query Frame = 0


Query: 96  MAAPAQVERSVSYNEHRSRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVI 155
           M    Q  ++  Y +   R PPPDLPSLLL  RI+Y+GMPL  +          VTEL+I
Sbjct: 1   MLESIQAVQAPYYGDVSYRTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELII 60

Query: 156 AQLMYLQWMDPKEPIYIYINSSGTTRDDGETI--------------------HTLTVGAA 215
           AQL+YL++ +P++PIY YINS+GT+   G+ I                    HT+ +G A
Sbjct: 61  AQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQA 120

Query: 216 IGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSGLMPASDVLIRAKEVQILLLLDNLFE 275
           +G A ++L+ GT G R  +PH+  ++ QPR  + G   ASD+ IRAKE            
Sbjct: 121 MGTAAMILSGGTPGNRASLPHATIVLNQPRTGAQG--QASDIQIRAKE------------ 180

Query: 276 VELRNFPLQGYKLSFLFHLVFQVITNRDTLVELLAKHTGNSLETVANAMKRPFYMDAIKA 316
                                 V+ N+ T++E+ A++TG   + +A    R  YM   +A
Sbjct: 181 ----------------------VLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQA 214

[Close]

BLAST of Carg26766 vs. Swiss-Prot
Match: sp|Q9XJ35|CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 85/222 (38.29%), Postives = 114/222 (51.35%), Query Frame = 0


Query: 114 RRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDD 173
           R  PPDLPSLLL  RI Y+GMP+VPAVTEL++AQ M+L + +P +PIY+YINS GT  + 
Sbjct: 166 RTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEK 225

Query: 174 GET--------------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQ 233
            ET                    ++T+  G A GQA +LL+ G KG R + PHS   +  
Sbjct: 226 METVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYL 285

Query: 234 PRV-PSSGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNR 293
           P+V  SSG   A D+ I+AKE+                                    N 
Sbjct: 286 PKVNRSSG--AAIDMWIKAKELD----------------------------------ANT 345

Query: 294 DTLVELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKI 315
           +  +ELLAK TG S E +   +KRP Y+ A  A ++G+ DKI
Sbjct: 346 EYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKI 351

[Close]

BLAST of Carg26766 vs. Swiss-Prot
Match: sp|Q8LB10|CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.5e-29
Identity = 85/221 (38.46%), Postives = 117/221 (52.94%), Query Frame = 0


Query: 115 RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRD-- 174
           +PPPDL S L   RIVY+GM LVP+VTEL++A+ +YLQ+ D ++PIY+YINS+GTT++  
Sbjct: 101 QPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGE 160

Query: 175 ----DGET-------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPR 234
               D E              I TL VG A G+A LLL AG KG R  +P S  MI+QP 
Sbjct: 161 KLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPI 220

Query: 235 VPSSGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTL 294
               G   A+DV I  KE++                           H+       +  +
Sbjct: 221 ARFQG--QATDVEIARKEIK---------------------------HI-------KTEM 280

Query: 295 VELLAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILW 317
           V+L +KH G S E +   MKRP Y    +A E+G+IDK+++
Sbjct: 281 VKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVY 285

[Close]

BLAST of Carg26766 vs. TrEMBL
Match: tr|A0A1S3BXZ3|A0A1S3BXZ3_CUCME (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103494643 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 8.2e-137
Identity = 265/365 (72.60%), Postives = 286/365 (78.36%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPM--AMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDP 60
           MA GMKLPMAV+LQKPM       SSSS L R INFRT    NATSKAKIP+PPINPKDP
Sbjct: 1   MAIGMKLPMAVTLQKPMXXXXXXXSSSSSLHRAINFRTVSCSNATSKAKIPMPPINPKDP 60

Query: 61  FLSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPP 120
           FLSKLASVASTSPETLL+RP NSDS PYLDIFD+P+LMAAPAQVERSVSYNEHR RRPPP
Sbjct: 61  FLSKLASVASTSPETLLNRPENSDSPPYLDIFDAPRLMAAPAQVERSVSYNEHRPRRPPP 120

Query: 121 DLPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET-- 180
           DLPSLLLHGRIVYIGMPLVPAVTEL++A+LMYLQWMDPKEPIYIYINS+GTTRDDGET  
Sbjct: 121 DLPSLLLHGRIVYIGMPLVPAVTELIVAELMYLQWMDPKEPIYIYINSTGTTRDDGETIG 180

Query: 181 ------------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPS 240
                             IHT+ VGAAIGQACLLLAAG++G+R+MMPH+KAMIQQPRVPS
Sbjct: 181 METEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGSEGRRYMMPHAKAMIQQPRVPS 240

Query: 241 SGLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVEL 300
           SGLMPASDVLIRAKE                                  VITNRDTLV+L
Sbjct: 241 SGLMPASDVLIRAKE----------------------------------VITNRDTLVKL 300

Query: 301 LAKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGI 344
           LAKHTGNS+ETV+N MKRPFYMDA  AKEFGV+DKILWRGQEKIM+ V +PEDWDKGAGI
Sbjct: 301 LAKHTGNSVETVSNVMKRPFYMDATLAKEFGVVDKILWRGQEKIMSAVVAPEDWDKGAGI 331

[Close]

BLAST of Carg26766 vs. TrEMBL
Match: tr|A0A0A0LLW4|A0A0A0LLW4_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_2G031150 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 4.1e-136
Identity = 260/364 (71.43%), Postives = 286/364 (78.57%), Query Frame = 0


Query: 1   MATGMKLPMAVSLQKPMAMAVPSSSSRLPRGINFRTCCSMNATSKAKIPLPPINPKDPFL 60
           MATGMKLPM V+LQKPMAMA PSSS  L R INFRT   +NATS AK+PLPPINPKDPFL
Sbjct: 1   MATGMKLPMTVTLQKPMAMAAPSSSFSLHRAINFRTVSCLNATSNAKVPLPPINPKDPFL 60

Query: 61  SKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDL 120
           SKLASVASTSPETLL+RP NS+S PYLDIFD+P+LMAAPAQVERS+SYNEHRSRRPPPDL
Sbjct: 61  SKLASVASTSPETLLNRPANSESPPYLDIFDAPRLMAAPAQVERSISYNEHRSRRPPPDL 120

Query: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET---- 180
           PSLLLHGRIVYIGMPLVPAVTELVIAQ+MYLQWMDPKEP+Y+YINS+GTTRDDGE     
Sbjct: 121 PSLLLHGRIVYIGMPLVPAVTELVIAQIMYLQWMDPKEPMYLYINSTGTTRDDGEVVAME 180

Query: 181 ----------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSG 240
                           IHT+ VGAA+G ACLLLAAGTKG+R+ MPH+KAMIQQP VPS G
Sbjct: 181 SEGFAIYDALMQSKNEIHTVNVGAAVGHACLLLAAGTKGRRYSMPHAKAMIQQPSVPSYG 240

Query: 241 LMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVELLA 300
           LMPASDV+IRAKE                                  V+TNRDTLV+LLA
Sbjct: 241 LMPASDVIIRAKE----------------------------------VLTNRDTLVKLLA 300

Query: 301 KHTGNSLETVANAMK-RPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIK 344
           KHT NS+ETVAN MK  P+YMD++KAKEFGVIDKILWRGQEKIMA++ASPEDWDKGAGIK
Sbjct: 301 KHTENSVETVANVMKGGPYYMDSVKAKEFGVIDKILWRGQEKIMADMASPEDWDKGAGIK 330

[Close]

BLAST of Carg26766 vs. TrEMBL
Match: tr|A0A2P5ASE4|A0A2P5ASE4_PARAD (ATP-dependent Clp protease proteolytic subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_304440 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 3.9e-131
Identity = 252/358 (70.39%), Postives = 280/358 (78.21%), Query Frame = 0


Query: 9   MAVSLQKPMAMAVPSSSSR---LPRGI-NFRTCCSMNATSKAKIPLPPINPKDPFLSKLA 68
           M +SLQ PM+ ++PSSSS     P+ + NFRT CS+NA +KAKIP+PPINPKDPFLSKLA
Sbjct: 1   MVISLQIPMSTSLPSSSSSPYLTPQNVRNFRTFCSINARAKAKIPVPPINPKDPFLSKLA 60

Query: 69  SVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDLPSLL 128
           SVA+TSPE LL+RP NSD+ PYLD+FDSP+LMA PAQVERSVSYNEHR RRPPPDLPSLL
Sbjct: 61  SVAATSPEALLNRPVNSDTPPYLDLFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLL 120

Query: 129 LHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET-------- 188
           LHGRIVYIGMPLVPAVTELV+A+LMYLQWMDPKEPIYIYINS+GTTRDDGET        
Sbjct: 121 LHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKEPIYIYINSTGTTRDDGETVGMETEGF 180

Query: 189 ------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSGLMPA 248
                       IHT+ VGAAIGQACLLLAAG+ GKRFMMPH+KAMIQQPRVPSSGLMPA
Sbjct: 181 AIYDAMRQLKNEIHTVAVGAAIGQACLLLAAGSTGKRFMMPHAKAMIQQPRVPSSGLMPA 240

Query: 249 SDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVELLAKHTG 308
           SDVLIRAKE                                  ++TNRDTLV+LLAKHTG
Sbjct: 241 SDVLIRAKE----------------------------------IVTNRDTLVKLLAKHTG 300

Query: 309 NSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKAVD 343
           NS ETVAN M+RPFYMD+ +AKEFGVIDKILWRGQEKIM++VA PEDWDKGAGIK VD
Sbjct: 301 NSEETVANVMRRPFYMDSTRAKEFGVIDKILWRGQEKIMSDVAPPEDWDKGAGIKVVD 324

[Close]

BLAST of Carg26766 vs. TrEMBL
Match: tr|A0A2P5BTJ5|A0A2P5BTJ5_9ROSA (ATP-dependent Clp protease proteolytic subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_309260 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 7.4e-130
Identity = 249/358 (69.55%), Postives = 279/358 (77.93%), Query Frame = 0


Query: 9   MAVSLQKPMAMAVPSSSSR---LPRGI-NFRTCCSMNATSKAKIPLPPINPKDPFLSKLA 68
           M +S+Q P++ ++PSSS      P+ + NFRT CS+NA +KAKIP+PPINPKDPFLSKLA
Sbjct: 1   MVISMQIPVSTSLPSSSPSPYLTPQNVRNFRTFCSINARAKAKIPVPPINPKDPFLSKLA 60

Query: 69  SVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPDLPSLL 128
           SVA+TSPE LL+RP NSD+ PYLD+FDSP+LMA PAQVERSVSYNEHR RRPPPDLPSLL
Sbjct: 61  SVAATSPEALLNRPVNSDTPPYLDLFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLL 120

Query: 129 LHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET-------- 188
           LHGRIVYIGMPLVPAVTELV+A+LMYLQWMDPKEPIYIYINS+GTTRDDGET        
Sbjct: 121 LHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKEPIYIYINSTGTTRDDGETVGMETEGF 180

Query: 189 ------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSSGLMPA 248
                       IHT+ VGAAIGQACLLLAAG+ GKRFMMPH+KAMIQQPRVPSSGLMPA
Sbjct: 181 AIYDAMRQLKNEIHTVAVGAAIGQACLLLAAGSTGKRFMMPHAKAMIQQPRVPSSGLMPA 240

Query: 249 SDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVELLAKHTG 308
           SDVLIRAKE                                  ++TNRDTLV+LLAKHTG
Sbjct: 241 SDVLIRAKE----------------------------------IVTNRDTLVKLLAKHTG 300

Query: 309 NSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIKAVD 343
           NS ETVAN M+RPFYMD+ +AKEFGVIDKILWRGQEKIM++VA PEDWDKGAGIK VD
Sbjct: 301 NSEETVANVMRRPFYMDSTRAKEFGVIDKILWRGQEKIMSDVAPPEDWDKGAGIKVVD 324

[Close]

BLAST of Carg26766 vs. TrEMBL
Match: tr|W9RRY1|W9RRY1_9ROSA (ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis OX=981085 GN=L484_010822 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 1.5e-127
Identity = 250/365 (68.49%), Postives = 274/365 (75.07%), Query Frame = 0


Query: 9   MAVSLQKPMAMAVPSSSS---------RLPRGINFRTCCSMNATSKAKIPLPPINPKDPF 68
           M + LQ P+  ++PSSSS         R PR  NFRT CS NA +KAKIP+PPINPKDPF
Sbjct: 1   MVMGLQLPITNSLPSSSSSSSPFFLGPRNPR--NFRTFCSFNAKAKAKIPVPPINPKDPF 60

Query: 69  LSKLASVASTSPETLLSRPGNSDSLPYLDIFDSPQLMAAPAQVERSVSYNEHRSRRPPPD 128
           LSKLASVA+TSPETLL RP NS+S PYLD+FD+P+LMA PAQVERSVSYN+ R   PPPD
Sbjct: 61  LSKLASVAATSPETLLDRPVNSESPPYLDLFDAPKLMATPAQVERSVSYNDQRPSTPPPD 120

Query: 129 LPSLLLHGRIVYIGMPLVPAVTELVIAQLMYLQWMDPKEPIYIYINSSGTTRDDGET--- 188
           LPSLLLHGRIVYIGMPLVPAVTELV+A+LMYLQWMDPKEPIYIYINS+GTTRDDGET   
Sbjct: 121 LPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKEPIYIYINSTGTTRDDGETVGM 180

Query: 189 -----------------IHTLTVGAAIGQACLLLAAGTKGKRFMMPHSKAMIQQPRVPSS 248
                            IHT+ VGAAIGQACLLL AGTKGKRFMMPH+KAMIQQPRVPSS
Sbjct: 181 ETEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLLAGTKGKRFMMPHAKAMIQQPRVPSS 240

Query: 249 GLMPASDVLIRAKEVQILLLLDNLFEVELRNFPLQGYKLSFLFHLVFQVITNRDTLVELL 308
           GLMPASDVLIRAKE                                  ++TNRDTLV+LL
Sbjct: 241 GLMPASDVLIRAKE----------------------------------IVTNRDTLVKLL 300

Query: 309 AKHTGNSLETVANAMKRPFYMDAIKAKEFGVIDKILWRGQEKIMAEVASPEDWDKGAGIK 345
           AKHTGNS ETVAN M+RPFYMDA KAKEFGVIDK+LWRGQEKIM++VA PEDWDK AGIK
Sbjct: 301 AKHTGNSEETVANVMRRPFYMDATKAKEFGVIDKVLWRGQEKIMSDVAPPEDWDKSAGIK 329

The following BLAST results are available for this feature:

BLAST of Carg26766 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545293.1	5.0e-162	84.89	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]
XP_022946246.1	8.5e-162	84.89	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]
XP_022999027.1	8.8e-159	83.24	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-...	[more]
XP_022150809.1	3.0e-143	75.21	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]
XP_008454159.1	1.2e-136	72.60	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 3, chl...	[more]

BLAST of Carg26766 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09130.3	2.7e-117	63.54	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G49970.1	6.5e-31	38.29	CLP protease proteolytic subunit 1	[more]
AT4G17040.1	2.5e-30	38.46	CLP protease R subunit 4	[more]
AT5G23140.1	1.6e-21	31.80	nuclear-encoded CLP protease P7	[more]
AT5G45390.1	4.4e-19	31.03	CLP protease P4	[more]

BLAST of Carg26766 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L770\|CLPR3_ARATH	1.7e-116	63.64	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]
sp\|P74466\|CLPR_SYNY3	7.3e-32	35.54	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp...	[more]
sp\|Q9L4P4\|CLPR_SYNE7	6.2e-31	34.00	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus el...	[more]
sp\|Q9XJ35\|CLPR1_ARATH	1.2e-29	38.29	ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ...	[more]
sp\|Q8LB10\|CLPR4_ARATH	4.5e-29	38.46	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]

BLAST of Carg26766 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BXZ3\|A0A1S3BXZ3_CUCME	8.2e-137	72.60	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0LLW4\|A0A0A0LLW4_CUCSA	4.1e-136	71.43	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
tr\|A0A2P5ASE4\|A0A2P5ASE4_PARAD	3.9e-131	70.39	ATP-dependent Clp protease proteolytic subunit OS=Parasponia andersonii OX=3476 ...	[more]
tr\|A0A2P5BTJ5\|A0A2P5BTJ5_9ROSA	7.4e-130	69.55	ATP-dependent Clp protease proteolytic subunit OS=Trema orientalis OX=63057 GN=T...	[more]
tr\|W9RRY1\|W9RRY1_9ROSA	1.5e-127	68.49	ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis OX=981085 GN=L...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR029045	ClpP/crotonase-like_dom_sf
IPR023562	ClpP/TepA
IPR001907	ClpP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26766-RA	Carg26766-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 179..196 score: 40.97 coord: 200..219 score: 37.25 coord: 119..134 score: 36.25 coord: 293..312 score: 38.0
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 128..314 e-value: 3.2236E-58 score: 187.264
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 269..315 e-value: 3.6E-8 score: 33.4 coord: 122..235 e-value: 1.4E-20 score: 73.8
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 176..234 coord: 267..343
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 35..171
None	No IPR available	PANTHER	PTHR10381:SF6	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 3, CHLOROPLASTIC	coord: 176..234 coord: 35..171 coord: 267..343
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	SSF52096	ClpP/crotonase	coord: 257..315 coord: 114..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26766	Cla019925	Watermelon (97103) v1	carwmB0739
Carg26766	Csa2G031150	Cucumber (Chinese Long) v2	carcuB0758
Carg26766	MELO3C004223	Melon (DHL92) v3.5.1	carmeB0737
Carg26766	ClCG02G015430	Watermelon (Charleston Gray)	carwcgB0719
Carg26766	CSPI02G04300	Wild cucumber (PI 183967)	carcpiB0775
Carg26766	Cucsa.091070	Cucumber (Gy14) v1	carcgyB0834
Carg26766	CmaCh05G011250	Cucurbita maxima (Rimu)	carcmaB1038
Carg26766	CmaCh12G010590	Cucurbita maxima (Rimu)	carcmaB1037
Carg26766	CmoCh12G010720	Cucurbita moschata (Rifu)	carcmoB1008
Carg26766	CmoCh05G011370	Cucurbita moschata (Rifu)	carcmoB1009
Carg26766	Lsi11G005890	Bottle gourd (USVL1VR-Ls)	carlsiB679
Carg26766	Cp4.1LG11g09070	Cucurbita pepo (Zucchini)	carcpeB1044
Carg26766	CsGy2G004410	Cucumber (Gy14) v2	carcgybB0737
Carg26766	MELO3C004223.2	Melon (DHL92) v3.6.1	carmedB0750
Carg26766	CsaV3_2G006650	Cucumber (Chinese Long) v3	carcucB0778
Carg26766	Cla97C02G041200	Watermelon (97103) v2	carwmbB0777
Carg26766	Bhi06G001291	Wax gourd	carwgoB0877

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26766	Cucurbita pepo (Zucchini)	carcpeB1045