Carg26745 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCTATCTCTGCCGTCGCCCACAATCTTTTCCTTGCCACTCCCTCGTCTCTTCTCCCACGTTCCCTTCTCCGCTGAGACTCCCGTTTGTTCGACACCAAGACCTTCCTCGGTTGCCAAGTGTTTTGAGGTGAAACAGAGGAGCCGATGAGGAAGCTTAAGTTTCACGAGCAGAAGCTTTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCATAGAGAAACCCAAGTCATGCATCGCTATCACATCACCGGTCGGGATGATTACAAGAAGTACCTTCCCCTTTCTTCTATCTTCTTCTATTTCTACCGTTTTCTTTCTGTTTACCGCTTTGATTTTTATTTTGTTTCATTTCATGTTTTAGGTATTCGAGCATATGCCGGGGCGTCCAGAAGCTGGTTAGCATGTTGAAGAAGATGAACGAGAAAGACCCTTTCCGATTGGAATTAACCGAGAAACTCCTCGAAAAGCTGTGAGTTTTCCCCTCCTTTTGGCTATAATTTTAGACACAAAATTTCCTACATTACATTTACATTAACCAAGTTTCTCGTCTATTTGTGTATATTAGTGATGAGAAGAAATTTATGGCATGTTGTTTGACTGCTCTTTCGATCACTGCTAAAATCTCCCCTTCTAGGTTCTAACAATTAAAGGGCTAGTTATGAGATTGGGAGGAGTCATTACATTCAAATCCTCCAGCCACAATTGTCTTTGTATTAAAAAAACCGATCCACATTTGTGTCATCGATGCGGACTTCTTTGATAAAGCATTGCTGATCATGTTTCTCTTATTGCCCGATACTCTTTATGGTTTATAGAATGAAGGGTTTGTTTCTTATTTCTTCTATGAATGATTTAGACTTTAGTTGTCCGATTTACGCCTATACCTATCATATTAAAGAAACTATCAACTTTCCAATGGACTTATCAATGCCTTTTCCTCTCCTATATTGCTTAAGCCATTTTAAACCTGATATCTTTTTGCTCAATGTTTCCAGAACCACTTCATTTCTTCAATCTATCTAAGATTCTGGATTAAATGGCATAAGAAACTATCAATATTCATCATGATTAATGTATATTATAATTTTCTAATGCTGAAATCATTTTGAACTTGTCTTATAGATGATCCTAATCTGAATGAATAATTGCATGCTAATCTGACTAAACTGAGATGAATTAATACAATCCGATTATATGTAACCATTTCTACTATTATTTGCAACTTTATCTGTAACATATTCCCACCTTTTCTCTCCTGAAAAAAAAATATATATATAACAGGTACAATATGGGTGTGATACCAACCCGACAGAGCTTGAATTTATGCGATCGCCTGTCAGTGTCATCCTTTTGCAGGTAAAACGAACATCCTGCAGAAAACAATTCATTTCTTCTTTGGAGTTTTTCATGTTTTCTACTGCTAATAGCCCAATATTACCAATACATGAACCCTCATCCTTTTGCTGCATATTATTTTGACCTCAACCCTGTTTTCCCCTTTCTCGTTGCAGACGGAGGCTGTCGACAGTACTGGTACGTTTGAAATTCGCAGAGCACTTGAGGGAAGCTGTTACATACATTGAGCAAGGGCATATTAGAGTTGGTCCAGAGACAGTTAATGACCCAGCATTTCTAGTTACAAGGAACATGGAGGACTTCATAACATGGGTTGATTCATCGAAGATAAAGAGAAAGGTTCTACAATACAACGATAAGTTGGATGATTTCGATGCAATGAACTGTTGAGAGATGAGTAGTTCTATCCAAGTTTTGGTTCCTTTTTTTGAGCACCTCATCTTGTATGAATCCTTTCTCTCCCACCCTTATTGAATTGGCTAATTAATATAGCATTGAGTGTTCTTCCATTTCCTTTTCTCATACCATATATAATTTACATTGTTTTATGTTACGAGCCTCATATCTCAGCTTCATCGATATTGCATAGCATGTAAGGTTGAATTCTTTTCTACCATTTTATATCTAATTGTGATATGTAGGGCTGTATTGATATATTTGATATCTATTTCTATTTGTTATAAACTTCATTAATTACAACAATTGTAATGATGAATTTATTAGGAACCTTCTATGTATTTTGGTCATTCTATGAAGACTATATATTTTTTTAAAAAATAACCAATCTTATTTACC ATCTATCTCTGCCGTCGCCCACAATCTTTTCCTTGCCACTCCCTCGTCTCTTCTCCCACGTTCCCTTCTCCGCTGAGACTCCCGTTTGTTCGACACCAAGACCTTCCTCGGTTGCCAAGTGTTTTGAGGTGAAACAGAGGAGCCGATGAGGAAGCTTAAGTTTCACGAGCAGAAGCTTTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCATAGAGAAACCCAAGTCATGCATCGCTATCACATCACCGGTCGGGATGATTACAAGAAGTATTCGAGCATATGCCGGGGCGTCCAGAAGCTGGTTAGCATGTTGAAGAAGATGAACGAGAAAGACCCTTTCCGATTGGAATTAACCGAGAAACTCCTCGAAAAGCTGTACAATATGGGTGTGATACCAACCCGACAGAGCTTGAATTTATGCGATCGCCTGTCAGTGTCATCCTTTTGCAGACGGAGGCTGTCGACAGTACTGGTACGTTTGAAATTCGCAGAGCACTTGAGGGAAGCTGTTACATACATTGAGCAAGGGCATATTAGAGTTGGTCCAGAGACAGTTAATGACCCAGCATTTCTAGTTACAAGGAACATGGAGGACTTCATAACATGGGTTGATTCATCGAAGATAAAGAGAAAGGTTCTACAATACAACGATAAGTTGGATGATTTCGATGCAATGAACTGTTGAGAGATGAGTAGTTCTATCCAAGTTTTGGTTCCTTTTTTTGAGCACCTCATCTTGTATGAATCCTTTCTCTCCCACCCTTATTGAATTGGCTAATTAATATAGCATTGAGTGTTCTTCCATTTCCTTTTCTCATACCATATATAATTTACATTGTTTTATGTTACGAGCCTCATATCTCAGCTTCATCGATATTGCATAGCATGTAAGGTTGAATTCTTTTCTACCATTTTATATCTAATTGTGATATGTAGGGCTGTATTGATATATTTGATATCTATTTCTATTTGTTATAAACTTCATTAATTACAACAATTGTAATGATGAATTTATTAGGAACCTTCTATGTATTTTGGTCATTCTATGAAGACTATATATTTTTTTAAAAAATAACCAATCTTATTTACC ATGAGGAAGCTTAAGTTTCACGAGCAGAAGCTTTTGAAGAAGGTCAACTTCTTAGAATGGAAGAGAGAAGGAGGTCATAGAGAAACCCAAGTCATGCATCGCTATCACATCACCGGTCGGGATGATTACAAGAAGTATTCGAGCATATGCCGGGGCGTCCAGAAGCTGGTTAGCATGTTGAAGAAGATGAACGAGAAAGACCCTTTCCGATTGGAATTAACCGAGAAACTCCTCGAAAAGCTGTACAATATGGGTGTGATACCAACCCGACAGAGCTTGAATTTATGCGATCGCCTGTCAGTGTCATCCTTTTGCAGACGGAGGCTGTCGACAGTACTGGTACGTTTGAAATTCGCAGAGCACTTGAGGGAAGCTGTTACATACATTGAGCAAGGGCATATTAGAGTTGGTCCAGAGACAGTTAATGACCCAGCATTTCTAGTTACAAGGAACATGGAGGACTTCATAACATGGGTTGATTCATCGAAGATAAAGAGAAAGGTTCTACAATACAACGATAAGTTGGATGATTTCGATGCAATGAACTGTTGA MRKLKFHEQKLLKKVNFLEWKREGGHRETQVMHRYHITGRDDYKKYSSICRGVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNMGVIPTRQSLNLCDRLSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVNDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDFDAMNC
BLAST of Carg26745 vs. NCBI nr
Match: XP_022955364.1 (U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita moschata] >XP_023526276.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 369.4 bits (947), Expect = 7.1e-99 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Carg26745 vs. NCBI nr
Match: XP_022980729.1 (U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita maxima]) HSP 1 Score: 367.5 bits (942), Expect = 2.7e-98 Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Carg26745 vs. NCBI nr
Match: XP_004153543.1 (PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus] >KGN53772.1 hypothetical protein Csa_4G126420 [Cucumis sativus]) HSP 1 Score: 358.6 bits (919), Expect = 1.3e-95 Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Carg26745 vs. NCBI nr
Match: XP_022155080.1 (U3 small nucleolar ribonucleoprotein protein IMP3 [Momordica charantia]) HSP 1 Score: 353.6 bits (906), Expect = 4.0e-94 Identity = 174/183 (95.08%), Postives = 179/183 (97.81%), Query Frame = 0
BLAST of Carg26745 vs. NCBI nr
Match: OWM84708.1 (hypothetical protein CDL15_Pgr027495 [Punica granatum] >PKI69862.1 hypothetical protein CRG98_009737 [Punica granatum]) HSP 1 Score: 333.6 bits (854), Expect = 4.3e-88 Identity = 161/182 (88.46%), Postives = 176/182 (96.70%), Query Frame = 0
BLAST of Carg26745 vs. TAIR10
Match: AT5G15750.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein) HSP 1 Score: 292.7 bits (748), Expect = 1.5e-79 Identity = 138/181 (76.24%), Postives = 163/181 (90.06%), Query Frame = 0
BLAST of Carg26745 vs. TAIR10
Match: AT5G39850.1 (Ribosomal protein S4) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07 Identity = 35/130 (26.92%), Postives = 67/130 (51.54%), Query Frame = 0
BLAST of Carg26745 vs. TAIR10
Match: AT5G15200.1 (Ribosomal protein S4) HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07 Identity = 36/144 (25.00%), Postives = 72/144 (50.00%), Query Frame = 0
BLAST of Carg26745 vs. Swiss-Prot
Match: sp|Q921Y2|IMP3_MOUSE (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Mus musculus OX=10090 GN=Imp3 PE=2 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 5.1e-56 Identity = 103/180 (57.22%), Postives = 142/180 (78.89%), Query Frame = 0
BLAST of Carg26745 vs. Swiss-Prot
Match: sp|Q3T0M3|IMP3_BOVIN (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Bos taurus OX=9913 GN=IMP3 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55 Identity = 102/180 (56.67%), Postives = 141/180 (78.33%), Query Frame = 0
BLAST of Carg26745 vs. Swiss-Prot
Match: sp|Q9NV31|IMP3_HUMAN (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Homo sapiens OX=9606 GN=IMP3 PE=1 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 5.6e-55 Identity = 102/180 (56.67%), Postives = 141/180 (78.33%), Query Frame = 0
BLAST of Carg26745 vs. Swiss-Prot
Match: sp|P32899|IMP3_YEAST (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IMP3 PE=1 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 2.1e-54 Identity = 100/180 (55.56%), Postives = 142/180 (78.89%), Query Frame = 0
BLAST of Carg26745 vs. Swiss-Prot
Match: sp|O13835|IMP3_SCHPO (U3 small nucleolar ribonucleoprotein protein imp3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=imp3 PE=3 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.5e-47 Identity = 89/183 (48.63%), Postives = 135/183 (73.77%), Query Frame = 0
BLAST of Carg26745 vs. TrEMBL
Match: tr|A0A0A0KZG3|A0A0A0KZG3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G126420 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 8.3e-96 Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Carg26745 vs. TrEMBL
Match: tr|A0A218XIS8|A0A218XIS8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr027495 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 2.9e-88 Identity = 161/182 (88.46%), Postives = 176/182 (96.70%), Query Frame = 0
BLAST of Carg26745 vs. TrEMBL
Match: tr|A0A059ADT3|A0A059ADT3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J01412 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 6.0e-86 Identity = 156/183 (85.25%), Postives = 174/183 (95.08%), Query Frame = 0
BLAST of Carg26745 vs. TrEMBL
Match: tr|A0A151REP1|A0A151REP1_CAJCA (U3 small nucleolar ribonucleo protein IMP3 OS=Cajanus cajan OX=3821 GN=KK1_037619 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.7e-85 Identity = 156/182 (85.71%), Postives = 173/182 (95.05%), Query Frame = 0
BLAST of Carg26745 vs. TrEMBL
Match: tr|A0A200Q351|A0A200Q351_9MAGN (Ribosomal protein S4/S9 OS=Macleaya cordata OX=56857 GN=BVC80_1215g18 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 3.0e-85 Identity = 154/182 (84.62%), Postives = 175/182 (96.15%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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