Carg26219 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26219
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Myb family transcription factor
Location	Cucurbita_argyrosperma_scaffold_160 : 167650 .. 168337 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAACTTACTTCCCAAAGTTTGGTGGGCAAAAGAACATATAGGCATTCACATAAACTTAAATTTCCCTGTGGATGTTTCAACCCTCCCTCTCATTACAGTTTTTCCTAAACTTCTGCCATCCTCAGTTCTCTATCTTCTTCCTGTTTCAGTGCTGCCTCTAATCTTTAGAGGAAACATGAACAATCATCGTCAGCAGAAACATGCCAAACTCCCTCCACTAGAATCTGAAGGTTTTAACTCGATTGTCTCTACTTTCCATGTCCTATTACTCAATCCTGGAATTCGTCTCTTCATGATCTTCTCACTTTCTAATGATATTTGAAGTCCTACTTCCTTTTTATGAATGTGTGGTTTATTATCTAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTAAGTTGGGTTCAAGGAAACCCAGATTTTTCAGCAAGAATGGATATAGATTCTGCTCCATCTCTCCTTCTAGTATCTGAGTTACTAAGAAAATGGCTTTTCCTTTCAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGGAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGAAGAAGAGGATGAGAGAGACAGAGAGATAT

mRNA sequence

ACAAACTTACTTCCCAAAGTTTGGTGGGCAAAAGAACATATAGGCATTCACATAAACTTAAATTTCCCTGTGGATGTTTCAACCCTCCCTCTCATTACAGTTTTTCCTAAACTTCTGCCATCCTCAGTTCTCTATCTTCTTCCTGTTTCAGTGCTGCCTCTAATCTTTAGAGGAAACATGAACAATCATCGTCAGCAGAAACATGCCAAACTCCCTCCACTAGAATCTGAAGGTTTTAACTCGATTGTCTCTACTTTCCATGTCCTATTACTCAATCCTGGAATTCGTCTCTTCATGATCTTCTCACTTTCTAATGATATTTGAAGTCCTACTTCCTTTTTATGAATGTGTGGTTTATTATCTAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGGAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGAAGAAGAGGATGAGAGAGACAGAGAGATAT

Coding sequence (CDS)

ATGATATTTGAAGTCCTACTTCCTTTTTATGAATGTGTGGTTTATTATCTAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGGAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGGAAAAAGAAGAAGAGGATGA

Protein sequence

MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGKRRRG

Homology

[Close]

BLAST of Carg26219 vs. NCBI nr
Match: XP_023534743.1 (transcription factor TRY-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.1 bits (370), Expect = 2.6e-32
Identity = 69/82 (84.15%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 1   MIFEVLLPFYECVVYYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 60
           + F +  PF + V  YLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK
Sbjct: 40  LFFMIFSPFLKFVACYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRK 99

Query: 61  PEEIERYWIMTHLEGFGKRRRG 83
           PEEIERYWIMTHLEGF  RRRG
Sbjct: 100 PEEIERYWIMTHLEGFAVRRRG 121

[Close]

BLAST of Carg26219 vs. NCBI nr
Match: XP_016898876.1 (PREDICTED: transcription factor TRY [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK
Sbjct: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78

Query: 79 RRRG 83
          RRRG
Sbjct: 79 RRRG 82

[Close]

BLAST of Carg26219 vs. NCBI nr
Match: XP_004145923.1 (PREDICTED: transcription factor TRY [Cucumis sativus] >XP_011654628.1 PREDICTED: transcription factor TRY [Cucumis sativus] >AET79925.1 R3 MYB transcription factor [Cucumis sativus] >KGN49883.1 hypothetical protein Csa_5G139610 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK
Sbjct: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78

Query: 79 RRRG 83
          RRRG
Sbjct: 79 RRRG 82

[Close]

BLAST of Carg26219 vs. NCBI nr
Match: XP_022973073.1 (transcription factor TRY-like [Cucurbita maxima] >XP_023549596.1 transcription factor TRY-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK
Sbjct: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78

Query: 79 RRRG 83
          RRRG
Sbjct: 79 RRRG 82

[Close]

BLAST of Carg26219 vs. NCBI nr
Match: XP_022922339.1 (transcription factor TRY-like [Cucurbita moschata])

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-29
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFG 
Sbjct: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGI 78

Query: 79 RRRG 83
          RRRG
Sbjct: 79 RRRG 82

[Close]

BLAST of Carg26219 vs. TAIR10
Match: AT5G53200.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 5.3e-24
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGF  
Sbjct: 22 EVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQPEEIERYWIMRNSEGFAD 81

Query: 79 RRR 82
          +RR
Sbjct: 82 KRR 84

[Close]

BLAST of Carg26219 vs. TAIR10
Match: AT2G46410.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 9.4e-21
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   F  
Sbjct: 27 EVSSIEWEAVKMSEEEEDLISRMYKLVGDRWELIAGRIPGRTPEEIERYWLMKHGVVFAN 86

Query: 79 RRR 82
          RRR
Sbjct: 87 RRR 89

[Close]

BLAST of Carg26219 vs. TAIR10
Match: AT2G30420.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 6.1e-20
Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 15 YYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLE 74
          Y   EVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + +
Sbjct: 25 YDSEEVSSIEWEFISMTEQEEDLISRMYRLVGNRWDLIAGRVVGRKANEIERYWIMRNSD 84

Query: 75 GFGKRRR 82
           F  +RR
Sbjct: 85 YFSHKRR 91

[Close]

BLAST of Carg26219 vs. TAIR10
Match: AT2G30424.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 93.2 bits (230), Expect = 8.0e-20
Identity = 39/63 (61.90%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +    
Sbjct: 25 EVNSVKWEFINMTEQEEDLIFRMHRLVGDRWDLIAGRVVGREAKDIERYWIMRNCDHCSH 84

Query: 79 RRR 82
          +RR
Sbjct: 85 KRR 87

[Close]

BLAST of Carg26219 vs. TAIR10
Match: AT2G30432.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-18
Identity = 38/61 (62.30%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSS +W+FI MT QEEDLI RM++L+GDRWDLIA R+ GR+ +EIERYWIM + + F  
Sbjct: 24 EVSSMKWEFINMTEQEEDLIFRMYRLVGDRWDLIARRVVGREAKEIERYWIMRNCDYFSH 83

Query: 79 R 80
          +
Sbjct: 84 K 84

[Close]

BLAST of Carg26219 vs. Swiss-Prot
Match: sp|Q8GV05|TRY_ARATH (Transcription factor TRY OS=Arabidopsis thaliana OX=3702 GN=TRY PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 9.6e-23
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGF  
Sbjct: 22 EVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQPEEIERYWIMRNSEGFAD 81

Query: 79 RRR 82
          +RR
Sbjct: 82 KRR 84

[Close]

BLAST of Carg26219 vs. Swiss-Prot
Match: sp|O22059|CPC_ARATH (Transcription factor CPC OS=Arabidopsis thaliana OX=3702 GN=CPC PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-19
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   F  
Sbjct: 27 EVSSIEWEAVKMSEEEEDLISRMYKLVGDRWELIAGRIPGRTPEEIERYWLMKHGVVFAN 86

Query: 79 RRR 82
          RRR
Sbjct: 87 RRR 89

[Close]

BLAST of Carg26219 vs. Swiss-Prot
Match: sp|Q84RD1|ETC2_ARATH (MYB-like transcription factor ETC2 OS=Arabidopsis thaliana OX=3702 GN=ETC2 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-18
Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 15 YYLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLE 74
          Y   EVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + +
Sbjct: 25 YDSEEVSSIEWEFISMTEQEEDLISRMYRLVGNRWDLIAGRVVGRKANEIERYWIMRNSD 84

Query: 75 GFGKRRR 82
           F  +RR
Sbjct: 85 YFSHKRR 91

[Close]

BLAST of Carg26219 vs. Swiss-Prot
Match: sp|B3H4X8|TCL2_ARATH (MYB-like transcription factor TCL2 OS=Arabidopsis thaliana OX=3702 GN=TCL2 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-18
Identity = 39/63 (61.90%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +    
Sbjct: 25 EVNSVKWEFINMTEQEEDLIFRMHRLVGDRWDLIAGRVVGREAKDIERYWIMRNCDHCSH 84

Query: 79 RRR 82
          +RR
Sbjct: 85 KRR 87

[Close]

BLAST of Carg26219 vs. Swiss-Prot
Match: sp|D3GKW6|TCL1_ARATH (MYB-like transcription factor TCL1 OS=Arabidopsis thaliana OX=3702 GN=TCL1 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.7e-17
Identity = 38/61 (62.30%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSS +W+FI MT QEEDLI RM++L+GDRWDLIA R+ GR+ +EIERYWIM + + F  
Sbjct: 24 EVSSMKWEFINMTEQEEDLIFRMYRLVGDRWDLIARRVVGREAKEIERYWIMRNCDYFSH 83

Query: 79 R 80
          +
Sbjct: 84 K 84

[Close]

BLAST of Carg26219 vs. TrEMBL
Match: tr|I6NF75|I6NF75_CUCSA (R3 MYB transcription factor OS=Cucumis sativus OX=3659 GN=TRY PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK
Sbjct: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78

Query: 79 RRRG 83
          RRRG
Sbjct: 79 RRRG 82

[Close]

BLAST of Carg26219 vs. TrEMBL
Match: tr|A0A1S4DSB1|A0A1S4DSB1_CUCME (transcription factor TRY OS=Cucumis melo OX=3656 GN=LOC103482948 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK
Sbjct: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78

Query: 79 RRRG 83
          RRRG
Sbjct: 79 RRRG 82

[Close]

BLAST of Carg26219 vs. TrEMBL
Match: tr|M0UAN2|M0UAN2_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103974532 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.8e-21
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSS  W+FI MT QEEDLI+RM++L+GDRWDLIAGRIPGRKPEEIER+WIM H EGF  
Sbjct: 19 EVSSVAWEFIDMTEQEEDLIYRMYRLVGDRWDLIAGRIPGRKPEEIERFWIMRHGEGFAA 78

Query: 79 RRRG 83
          +R G
Sbjct: 79 KRHG 82

[Close]

BLAST of Carg26219 vs. TrEMBL
Match: tr|M0TRZ1|M0TRZ1_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103995061 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-21
Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSS  WQFI MT QEEDLI+RM++L+GDRWD+IAGRIPGRKPEEIER+WIM H EGF  
Sbjct: 19 EVSSVEWQFINMTEQEEDLIYRMYRLVGDRWDIIAGRIPGRKPEEIERFWIMRHGEGFAA 78

Query: 79 RRR 82
           RR
Sbjct: 79 ARR 81

[Close]

BLAST of Carg26219 vs. TrEMBL
Match: tr|A0A2G5CTG8|A0A2G5CTG8_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03700095v1 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.0e-21
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 19 EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFGK 78
          EVSS  W+FI M+ QEEDLI+RMHKL+GDRWDLIAGRIPGRKPEEIER+WIM H E F +
Sbjct: 18 EVSSIEWEFIQMSDQEEDLIYRMHKLVGDRWDLIAGRIPGRKPEEIERFWIMKHGEAFAQ 77

Query: 79 RRRG 83
           R+G
Sbjct: 78 DRKG 81

The following BLAST results are available for this feature:

BLAST of Carg26219 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534743.1	2.6e-32	84.15	transcription factor TRY-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_016898876.1	1.8e-30	100.00	PREDICTED: transcription factor TRY [Cucumis melo]	[more]
XP_004145923.1	1.8e-30	100.00	PREDICTED: transcription factor TRY [Cucumis sativus] >XP_011654628.1 PREDICTED:...	[more]
XP_022973073.1	1.8e-30	100.00	transcription factor TRY-like [Cucurbita maxima] >XP_023549596.1 transcription f...	[more]
XP_022922339.1	1.6e-29	98.44	transcription factor TRY-like [Cucurbita moschata]	[more]

BLAST of Carg26219 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53200.1	5.3e-24	73.02	Homeodomain-like superfamily protein	[more]
AT2G46410.1	9.4e-21	66.67	Homeodomain-like superfamily protein	[more]
AT2G30420.1	6.1e-20	62.69	Homeodomain-like superfamily protein	[more]
AT2G30424.1	8.0e-20	61.90	Homeodomain-like superfamily protein	[more]
AT2G30432.1	1.5e-18	62.30	Homeodomain-like superfamily protein	[more]

BLAST of Carg26219 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GV05\|TRY_ARATH	9.6e-23	73.02	Transcription factor TRY OS=Arabidopsis thaliana OX=3702 GN=TRY PE=1 SV=1	[more]
sp\|O22059\|CPC_ARATH	1.7e-19	66.67	Transcription factor CPC OS=Arabidopsis thaliana OX=3702 GN=CPC PE=1 SV=1	[more]
sp\|Q84RD1\|ETC2_ARATH	1.1e-18	62.69	MYB-like transcription factor ETC2 OS=Arabidopsis thaliana OX=3702 GN=ETC2 PE=1 ...	[more]
sp\|B3H4X8\|TCL2_ARATH	1.4e-18	61.90	MYB-like transcription factor TCL2 OS=Arabidopsis thaliana OX=3702 GN=TCL2 PE=1 ...	[more]
sp\|D3GKW6\|TCL1_ARATH	2.7e-17	62.30	MYB-like transcription factor TCL1 OS=Arabidopsis thaliana OX=3702 GN=TCL1 PE=2 ...	[more]

BLAST of Carg26219 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|I6NF75\|I6NF75_CUCSA	1.2e-30	100.00	R3 MYB transcription factor OS=Cucumis sativus OX=3659 GN=TRY PE=2 SV=1	[more]
tr\|A0A1S4DSB1\|A0A1S4DSB1_CUCME	1.2e-30	100.00	transcription factor TRY OS=Cucumis melo OX=3656 GN=LOC103482948 PE=4 SV=1	[more]
tr\|M0UAN2\|M0UAN2_MUSAM	1.8e-21	75.00	Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103974...	[more]
tr\|M0TRZ1\|M0TRZ1_MUSAM	2.3e-21	76.19	Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103995...	[more]
tr\|A0A2G5CTG8\|A0A2G5CTG8_AQUCA	3.0e-21	75.00	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03700095v1 PE=4...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26219-RA	Carg26219-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 26..74 e-value: 8.4E-6 score: 35.3
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 30..69 e-value: 1.6E-7 score: 31.2
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 29..68 e-value: 2.35701E-6 score: 39.0958
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 31..73 e-value: 2.3E-9 score: 39.1
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 18..81
None	No IPR available	PANTHER	PTHR10641:SF631	MYB-LIKE TRANSCRIPTION FACTOR ETC1-RELATED	coord: 18..81
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 31..70

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26219	Cla004910	Watermelon (97103) v1	carwmB0294
Carg26219	Csa5G139610	Cucumber (Chinese Long) v2	carcuB0327
Carg26219	ClCG01G000590	Watermelon (Charleston Gray)	carwcgB0294
Carg26219	CSPI05G03360	Wild cucumber (PI 183967)	carcpiB0333
Carg26219	Cucsa.201970	Cucumber (Gy14) v1	carcgyB0352
Carg26219	CmaCh02G011010	Cucurbita maxima (Rimu)	carcmaB0417
Carg26219	CmaCh15G010400	Cucurbita maxima (Rimu)	carcmaB0416
Carg26219	CmoCh15G011000	Cucurbita moschata (Rifu)	carcmoB0411
Carg26219	CmoCh02G011270	Cucurbita moschata (Rifu)	carcmoB0412
Carg26219	Lsi09G000400	Bottle gourd (USVL1VR-Ls)	carlsiB276
Carg26219	Cp4.1LG05g06140	Cucurbita pepo (Zucchini)	carcpeB0418
Carg26219	Cp4.1LG13g03040	Cucurbita pepo (Zucchini)	carcpeB0417
Carg26219	CsGy5G000600	Cucumber (Gy14) v2	carcgybB0313
Carg26219	MELO3C034013.2	Melon (DHL92) v3.6.1	carmedB0313
Carg26219	CsaV3_5G000690	Cucumber (Chinese Long) v3	carcucB0333
Carg26219	Cla97C01G000650	Watermelon (97103) v2	carwmbB0310
Carg26219	Bhi12G000540	Wax gourd	carwgoB0388

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26219	Carg14031	Silver-seed gourd	carcarB329

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26219	Melon (DHL92) v3.5.1	carmeB0302