Carg26025 (gene) Silver-seed gourd

Overview
NameCarg26025
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionLate embryogenesis abundant protein
LocationCucurbita_argyrosperma_scaffold_296 : 80798 .. 81457 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATAAGGACCAAGCTCGACCTCTCGCCCCAACTACTCACTGCCGTCCGAGTAGCGACGACTACCAAGAACAATTGCATCTAAAGAGAATCCAGCGAAGAAGGTTCATAAAACTCTTCTGTTTCATAATTGGCCTTCTCATAATACTATCAGTAATAGTCATCCTTATCTTGATGTTCACTCTATTCCAAGTCAAGGATCCCATAATCCAAATGAACAAGATTTCAATCACAAAACTCGAGTTGATCAACGGTGTCATACCAAAGCCAGGATCCAACGTGTCATTGACAGCTGACGTGTCAGTGAAAAATCCTAACGTGGCGTCGTTCAAGTACAGTAACACGACGACAACTCTGTACATTAACGAGACAGTGATAGGGGAGGCTCGAGGGCCGCCGGGGCAAGCCAAGGCACGACGAACGGTGCAAATGAACCTTACTATCAACATCGTCGTTGACCGACTCTTGTTGAACCTTAACAGCGACATGAGCTCAGGGAAGCTGAGACTGAGAAGCTTTTCGAGAGTTCCAGGGAGAGTGAAACTATTACATATTCTAAGGAGAAATATTGTTGTCAAAATGAACTGTACGTCGACGATCAATATCTTCAACAAATCGATTGAAGATCAAAATTGCAAGAGGAAGGTGAAGATATAG

mRNA sequence

ATGGCGGATAAGGACCAAGCTCGACCTCTCGCCCCAACTACTCACTGCCGTCCGAGTAGCGACGACTACCAAGAACAATTGCATCTAAAGAGAATCCAGCGAAGAAGGTTCATAAAACTCTTCTGTTTCATAATTGGCCTTCTCATAATACTATCAGTAATAGTCATCCTTATCTTGATGTTCACTCTATTCCAAGTCAAGGATCCCATAATCCAAATGAACAAGATTTCAATCACAAAACTCGAGTTGATCAACGGTGTCATACCAAAGCCAGGATCCAACGTGTCATTGACAGCTGACGTGTCAGTGAAAAATCCTAACGTGGCGTCGTTCAAGTACAGTAACACGACGACAACTCTGTACATTAACGAGACAGTGATAGGGGAGGCTCGAGGGCCGCCGGGGCAAGCCAAGGCACGACGAACGGTGCAAATGAACCTTACTATCAACATCGTCGTTGACCGACTCTTGTTGAACCTTAACAGCGACATGAGCTCAGGGAAGCTGAGACTGAGAAGCTTTTCGAGAGTTCCAGGGAGAGTGAAACTATTACATATTCTAAGGAGAAATATTGTTGTCAAAATGAACTGTACGTCGACGATCAATATCTTCAACAAATCGATTGAAGATCAAAATTGCAAGAGGAAGGTGAAGATATAG

Coding sequence (CDS)

ATGGCGGATAAGGACCAAGCTCGACCTCTCGCCCCAACTACTCACTGCCGTCCGAGTAGCGACGACTACCAAGAACAATTGCATCTAAAGAGAATCCAGCGAAGAAGGTTCATAAAACTCTTCTGTTTCATAATTGGCCTTCTCATAATACTATCAGTAATAGTCATCCTTATCTTGATGTTCACTCTATTCCAAGTCAAGGATCCCATAATCCAAATGAACAAGATTTCAATCACAAAACTCGAGTTGATCAACGGTGTCATACCAAAGCCAGGATCCAACGTGTCATTGACAGCTGACGTGTCAGTGAAAAATCCTAACGTGGCGTCGTTCAAGTACAGTAACACGACGACAACTCTGTACATTAACGAGACAGTGATAGGGGAGGCTCGAGGGCCGCCGGGGCAAGCCAAGGCACGACGAACGGTGCAAATGAACCTTACTATCAACATCGTCGTTGACCGACTCTTGTTGAACCTTAACAGCGACATGAGCTCAGGGAAGCTGAGACTGAGAAGCTTTTCGAGAGTTCCAGGGAGAGTGAAACTATTACATATTCTAAGGAGAAATATTGTTGTCAAAATGAACTGTACGTCGACGATCAATATCTTCAACAAATCGATTGAAGATCAAAATTGCAAGAGGAAGGTGAAGATATAG

Protein sequence

MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVIVILILMFTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTLYINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLNLNSDMSSGKLRLRSFSRVPGRVKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI
Homology
[Close]
BLAST of Carg26025 vs. NCBI nr
Match: XP_022959336.1 (uncharacterized protein LOC111460339 [Cucurbita moschata])

HSP 1 Score: 391.3 bits (1004), Expect = 2.1e-105
Identity = 206/219 (94.06%), Postives = 211/219 (96.35%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           MADKDQARPLAP T CRPSSDDYQE+LHLKRIQRRRFIKLFCFIIGLLIILSV     L+
Sbjct: 1   MADKDQARPLAPATDCRPSSDDYQEKLHLKRIQRRRFIKLFCFIIGLLIILSVGVILILI 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120
           FTLFQVKDPIIQMN ISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL
Sbjct: 61  FTLFQVKDPIIQMNNISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120

Query: 121 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLNLNSDMSSGKLRLRSFSRVPGR 180
           YINETVIGEARGPPGQAKARRTV+MNLTINIVVDRLLLNLNSDMSSGKLRLRSFSRVPGR
Sbjct: 121 YINETVIGEARGPPGQAKARRTVRMNLTINIVVDRLLLNLNSDMSSGKLRLRSFSRVPGR 180

Query: 181 VKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           VK+LHILRRNIVVKMNCTSTINIFNKSIEDQ+CKRKVKI
Sbjct: 181 VKVLHILRRNIVVKMNCTSTINIFNKSIEDQDCKRKVKI 219

[Close]
BLAST of Carg26025 vs. NCBI nr
Match: XP_023548342.1 (uncharacterized protein LOC111807010 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.2 bits (962), Expect = 1.5e-100
Identity = 201/219 (91.78%), Postives = 213/219 (97.26%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           MADKDQARPLAP T CRPS+DDYQE+LHLKR  +RRFIKLFCFIIGLL+ILS XXXXX +
Sbjct: 1   MADKDQARPLAPATDCRPSNDDYQEKLHLKR--KRRFIKLFCFIIGLLVILSXXXXXXXI 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120
           FTLFQVKDPIIQMNKISITKLELING+IPKPGSNVSLTADVSVKNPN+ASFKYSNTTTTL
Sbjct: 61  FTLFQVKDPIIQMNKISITKLELINGIIPKPGSNVSLTADVSVKNPNMASFKYSNTTTTL 120

Query: 121 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLNLNSDMSSGKLRLRSFSRVPGR 180
           YINETVIGEARGPPGQAKARRTV+MNLTINIVVD+LLLNLNSDMSSGKLRLRSFSRVPGR
Sbjct: 121 YINETVIGEARGPPGQAKARRTVRMNLTINIVVDQLLLNLNSDMSSGKLRLRSFSRVPGR 180

Query: 181 VKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           VKLLHI+RRNI+VKMNCTSTINIFNKSIEDQ+CKRKVKI
Sbjct: 181 VKLLHIIRRNIIVKMNCTSTINIFNKSIEDQDCKRKVKI 217

[Close]
BLAST of Carg26025 vs. NCBI nr
Match: XP_023006660.1 (uncharacterized protein LOC111499318 [Cucurbita maxima])

HSP 1 Score: 323.6 bits (828), Expect = 5.3e-85
Identity = 181/219 (82.65%), Postives = 187/219 (85.39%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           MADKDQARPLA  T CRPSSDDYQE+LHLK+                      XXXXX  
Sbjct: 1   MADKDQARPLALATDCRPSSDDYQEKLHLKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120
                VKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL
Sbjct: 61  XXXXXVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120

Query: 121 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLNLNSDMSSGKLRLRSFSRVPGR 180
           YINETVIGEARGPPGQAKARRTV+MNLTINIVVDRLLLNLN+DMSSGKLRLRSFSRVPGR
Sbjct: 121 YINETVIGEARGPPGQAKARRTVRMNLTINIVVDRLLLNLNNDMSSGKLRLRSFSRVPGR 180

Query: 181 VKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           VKLLHI+RRNIVVKMNCTSTINIFNKSIEDQ+CKRKVKI
Sbjct: 181 VKLLHIIRRNIVVKMNCTSTINIFNKSIEDQDCKRKVKI 219

[Close]
BLAST of Carg26025 vs. NCBI nr
Match: XP_011656360.1 (PREDICTED: uncharacterized protein LOC105435724 [Cucumis sativus] >KGN45696.1 hypothetical protein Csa_6G006820 [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 6.8e-80
Identity = 164/219 (74.89%), Postives = 193/219 (88.13%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           M DKDQA+PL P T  R SSD+ + +LHLKRIQR+RFIK   FI+ LL+I + XXXXX M
Sbjct: 1   MVDKDQAQPLTPATLNRLSSDNGETRLHLKRIQRKRFIKCCSFIVALLMIPTXXXXXXXM 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120
           FTLFQ+KDPIIQMN++SITKLELIN VIPKPGSNVSLTADVSVKNPN+ASFKYSNTTTTL
Sbjct: 61  FTLFQIKDPIIQMNRVSITKLELINNVIPKPGSNVSLTADVSVKNPNMASFKYSNTTTTL 120

Query: 121 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLNLNSDMSSGKLRLRSFSRVPGR 180
           +INETVIGE RGP G+AKAR+TV+MN+TI+IV DR+L NLN+D+S GK+RLRSFSR+PG+
Sbjct: 121 FINETVIGEVRGPSGKAKARQTVRMNVTIDIVADRVLSNLNNDVSLGKVRLRSFSRIPGK 180

Query: 181 VKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           VKLLH + RN+VVKMNCT  INIF+KSIEDQ CKRK+K+
Sbjct: 181 VKLLHFIGRNVVVKMNCTFVINIFSKSIEDQKCKRKMKM 219

[Close]
BLAST of Carg26025 vs. NCBI nr
Match: XP_008458164.1 (PREDICTED: uncharacterized protein LOC103497685 [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 159/219 (72.60%), Postives = 187/219 (85.39%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           M  KDQA+PL P T  R SSD+ + +LHLKRIQR+RFIK   FI         XXXXX  
Sbjct: 1   MVGKDQAQPLTPATLDRLSSDNGETELHLKRIQRKRFIKCCSFIXXXXXXXXXXXXXXXX 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120
           FTLFQ+KDPII+MN++SITKLELIN VIPKPGSNVSLTADVSVKNPN+ASFKYSNTTTTL
Sbjct: 61  FTLFQIKDPIIRMNRVSITKLELINNVIPKPGSNVSLTADVSVKNPNMASFKYSNTTTTL 120

Query: 121 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLNLNSDMSSGKLRLRSFSRVPGR 180
           +INETVIGE RGPPG+AKAR+TV+MN+TI+IV DR+L NLN+D+S GK+RLRSFSR+PG+
Sbjct: 121 FINETVIGEVRGPPGKAKARQTVRMNVTIDIVADRVLSNLNNDVSLGKVRLRSFSRIPGK 180

Query: 181 VKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           VKLLH++ RN+VVKMNCT  INIF+KSIEDQ CKRK+K+
Sbjct: 181 VKLLHLIGRNVVVKMNCTFVINIFSKSIEDQKCKRKMKM 219

[Close]
BLAST of Carg26025 vs. TAIR10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 164.9 bits (416), Expect = 5.8e-41
Identity = 94/224 (41.96%), Postives = 147/224 (65.62%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           MAD +  RPLAP T   P SD+    +      R R     C     LI+ ++     L+
Sbjct: 1   MADSEHVRPLAPAT-ILPVSDESASNIKNTHRSRNRIKCSICVTATSLILTTI--VLTLV 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGV--IPKPGSNVSLTADVSVKNPNVASFKYSNTTT 120
           FT+F+VKDPII+MN + +  L+ + G   +   G+N+S+  DVSVKNPN ASFKYSNTTT
Sbjct: 61  FTVFRVKDPIIKMNGVMVNGLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTT 120

Query: 121 TLYINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLN--LNSDMS-SGKLRLRSFS 180
            +Y   T++GEA G PG+A+  RT +MN+T++I++DR+L +  L  ++S SG + + S++
Sbjct: 121 DIYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYT 180

Query: 181 RVPGRVKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           RV G+VK++ I+++++ VKMNCT  +NI  ++I+D +CK+K+ +
Sbjct: 181 RVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQDVDCKKKIDL 221

[Close]
BLAST of Carg26025 vs. TAIR10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 92.4 bits (228), Expect = 3.6e-19
Identity = 52/161 (32.30%), Postives = 96/161 (59.63%), Query Frame = 0 

Query: 62  TLFQVKDPIIQMNKISITKLEL-INGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 121
           TLF+ K P   ++ +++ +L+  +N ++ K   N++L  D+S+KNPN   F Y +++  L
Sbjct: 75  TLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALL 134

Query: 122 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLL--LNLNSDMSSGKLRLRSFSRVP 181
                VIGEA  P  +  AR+TV +N+T+ ++ DRLL    L SD+ +G + L +F +V 
Sbjct: 135 NYRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVT 194

Query: 182 GRVKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           G+V +L I +  +    +C  +I++ ++++  Q+CK   K+
Sbjct: 195 GKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKYSTKL 235

[Close]
BLAST of Carg26025 vs. TAIR10
Match: AT4G23610.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 77.8 bits (190), Expect = 9.3e-15
Identity = 61/204 (29.90%), Postives = 102/204 (50.00%), Query Frame = 0 

Query: 3   DKDQARPLAP----TTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXX 62
           ++DQA+PLAP    T   +P  +D       K +  +  + L C  I  L +L       
Sbjct: 9   NEDQAKPLAPLFLTTRSDQPDEEDQYHHDRTKYVHSQTKLILCCGFIASLTMLIAVTFIV 68

Query: 63  LMFTLFQVKDPIIQMNKISIT-KLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTT 122
           L  T+F +  P + ++ IS   + + +NG +     N +++ ++S+ NPN A F   N  
Sbjct: 69  LSLTVFHLHSPNLTVDSISFNQRFDFVNGKV-NTNQNTTVSVEISLHNPNPALFIVKNVN 128

Query: 123 TTLYINE-TVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLN---LNSDMSSGKLRLRS 182
            + Y  E  V+GE+        A+RTV+MNLT  IV  +LL +   L  D++   + L+S
Sbjct: 129 VSFYHGELVVVGESIRRSETIPAKRTVKMNLTAEIVKTKLLASLPGLMEDLNGRGVDLKS 188

Query: 183 FSRVPGRVKLLHILRRNIVVKMNC 198
              V GRVK + I R+ + ++ +C
Sbjct: 189 SVEVRGRVKKMKIFRKTVHLQTDC 211

[Close]
BLAST of Carg26025 vs. TAIR10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 67.8 bits (164), Expect = 9.6e-12
Identity = 45/185 (24.32%), Postives = 93/185 (50.27%), Query Frame = 0 

Query: 39  KLFCFIIGLLIILSVXXXXXLMFT-LFQVKDPIIQMNKISITKLELINGVIPKPGSNVSL 98
           ++ C + G++ +L V     L+   +F+ K PI+Q    ++  +     +  +   N +L
Sbjct: 5   RICCIVSGIIFVLFVIFMTALILAQVFKPKHPILQTVSSTVDGISTNISLPYEVQLNFTL 64

Query: 99  TADVSVKNPNVASFKYSNTTTTLYINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLL 158
           T ++ +KNPNVA F+Y      +Y  +T++G    P     A+ +V +   + + +D+ +
Sbjct: 65  TLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLDKFV 124

Query: 159 LNLN---SDMSSGKLRLRSFSRVPGRVKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCK 218
            NL     D+  GK+ + + +++PG++ LL I +  +    +C   +   +  +EDQ C 
Sbjct: 125 ANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQVCD 184

Query: 219 RKVKI 220
            K K+
Sbjct: 185 LKTKL 189

[Close]
BLAST of Carg26025 vs. TAIR10
Match: AT3G44380.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 44.3 bits (103), Expect = 1.1e-04
Identity = 34/121 (28.10%), Postives = 56/121 (46.28%), Query Frame = 0 

Query: 67  KDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTLYINETV 126
           KDP   +  I +T L+L       P  +  L   V V NPN+A+  YS+T  T+  + TV
Sbjct: 34  KDPTFHLISIDLTSLKL-----NLPVLDAELMLTVHVTNPNIAAIHYSSTKMTILYDGTV 93

Query: 127 IGEARGPPGQAKARRTVQMNLTINIVVDRLLLNLN---SDMSSGKLRLRSFSRVPGRVKL 185
           +G A    G   AR    + L   +    L  +     SD+++ +++L +   + G  K+
Sbjct: 94  LGSAEVKAGSQPARSCQLLRLPARLDGMELAQHARQFFSDVANREMKLEAKLTIEGAAKV 149

[Close]
BLAST of Carg26025 vs. TrEMBL
Match: tr|A0A0A0KD33|A0A0A0KD33_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006820 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 4.5e-80
Identity = 164/219 (74.89%), Postives = 193/219 (88.13%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           M DKDQA+PL P T  R SSD+ + +LHLKRIQR+RFIK   FI+ LL+I + XXXXX M
Sbjct: 1   MVDKDQAQPLTPATLNRLSSDNGETRLHLKRIQRKRFIKCCSFIVALLMIPTXXXXXXXM 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120
           FTLFQ+KDPIIQMN++SITKLELIN VIPKPGSNVSLTADVSVKNPN+ASFKYSNTTTTL
Sbjct: 61  FTLFQIKDPIIQMNRVSITKLELINNVIPKPGSNVSLTADVSVKNPNMASFKYSNTTTTL 120

Query: 121 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLNLNSDMSSGKLRLRSFSRVPGR 180
           +INETVIGE RGP G+AKAR+TV+MN+TI+IV DR+L NLN+D+S GK+RLRSFSR+PG+
Sbjct: 121 FINETVIGEVRGPSGKAKARQTVRMNVTIDIVADRVLSNLNNDVSLGKVRLRSFSRIPGK 180

Query: 181 VKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           VKLLH + RN+VVKMNCT  INIF+KSIEDQ CKRK+K+
Sbjct: 181 VKLLHFIGRNVVVKMNCTFVINIFSKSIEDQKCKRKMKM 219

[Close]
BLAST of Carg26025 vs. TrEMBL
Match: tr|A0A1S3C8G8|A0A1S3C8G8_CUCME (uncharacterized protein LOC103497685 OS=Cucumis melo OX=3656 GN=LOC103497685 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 7.9e-77
Identity = 159/219 (72.60%), Postives = 187/219 (85.39%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           M  KDQA+PL P T  R SSD+ + +LHLKRIQR+RFIK   FI         XXXXX  
Sbjct: 1   MVGKDQAQPLTPATLDRLSSDNGETELHLKRIQRKRFIKCCSFIXXXXXXXXXXXXXXXX 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120
           FTLFQ+KDPII+MN++SITKLELIN VIPKPGSNVSLTADVSVKNPN+ASFKYSNTTTTL
Sbjct: 61  FTLFQIKDPIIRMNRVSITKLELINNVIPKPGSNVSLTADVSVKNPNMASFKYSNTTTTL 120

Query: 121 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLNLNSDMSSGKLRLRSFSRVPGR 180
           +INETVIGE RGPPG+AKAR+TV+MN+TI+IV DR+L NLN+D+S GK+RLRSFSR+PG+
Sbjct: 121 FINETVIGEVRGPPGKAKARQTVRMNVTIDIVADRVLSNLNNDVSLGKVRLRSFSRIPGK 180

Query: 181 VKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           VKLLH++ RN+VVKMNCT  INIF+KSIEDQ CKRK+K+
Sbjct: 181 VKLLHLIGRNVVVKMNCTFVINIFSKSIEDQKCKRKMKM 219

[Close]
BLAST of Carg26025 vs. TrEMBL
Match: tr|A0A2P6SHY2|A0A2P6SHY2_ROSCH (Putative Late embryogenesis abundant protein, LEA-14 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0357811 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.7e-63
Identity = 124/221 (56.11%), Postives = 177/221 (80.09%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           M +K+QARPLAP  + RPSSDD +  LH+KR ++++FI   C  I  ++++       L 
Sbjct: 1   MVEKEQARPLAPAGY-RPSSDDNEAALHIKRARQKKFINC-CGCITAIVLIQAVVIIILA 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120
           FT+F+VK+P I MNK+++TKLEL+NG  PKPG+N+SLTADVSVKNPNVASFKYSNTTTTL
Sbjct: 61  FTVFRVKEPKINMNKVTVTKLELVNGTTPKPGTNISLTADVSVKNPNVASFKYSNTTTTL 120

Query: 121 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLL--NLNSDMSSGKLRLRSFSRVP 180
           Y + TV+GEARGPPG++KARRT++MN+T++I+ D L+   NL +D+ SG L + S+SR+P
Sbjct: 121 YYHGTVVGEARGPPGRSKARRTMRMNITVDIITDMLITNPNLKADVDSGLLTMSSYSRIP 180

Query: 181 GRVKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           GRV +L+I++++++VKMNCT T+NI +++I++Q CKRKV +
Sbjct: 181 GRVNMLNIVKKHVIVKMNCTMTVNISSQAIQEQKCKRKVNL 219

[Close]
BLAST of Carg26025 vs. TrEMBL
Match: tr|A0A2I4GMG7|A0A2I4GMG7_9ROSI (uncharacterized protein LOC109009171 OS=Juglans regia OX=51240 GN=LOC109009171 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.9e-63
Identity = 125/221 (56.56%), Postives = 179/221 (81.00%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           M ++DQARPLAP+T  RPSSD+ +  LH+++++R+R +K +C  +  L+++       L+
Sbjct: 1   MVERDQARPLAPSTD-RPSSDNDEAALHIQKLRRKRCVK-WCGCVAALLLIQAVVILILI 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120
           FT+F+VKDP+I+MN I++TKLELING  PKPG+N+SLTADVSVKNPNVASFKY NTTTTL
Sbjct: 61  FTVFRVKDPVIKMNGITVTKLELINGTTPKPGTNMSLTADVSVKNPNVASFKYKNTTTTL 120

Query: 121 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLLNLN--SDMSSGKLRLRSFSRVP 180
           + N T++GEARGPPGQAK RRT++MN+T++I+ D+LL N N  +D+ S  L + S+SR+P
Sbjct: 121 FYNGTMVGEARGPPGQAKPRRTMRMNITVDIITDQLLSNPNLAADVKSEVLSMSSYSRIP 180

Query: 181 GRVKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           GRVK++ I+++++VVKMNCT T+NI +++I+ Q CKRKV +
Sbjct: 181 GRVKMIGIIKKHVVVKMNCTFTVNITSQAIQSQKCKRKVSL 219

[Close]
BLAST of Carg26025 vs. TrEMBL
Match: tr|A0A2P4LEH1|A0A2P4LEH1_QUESU (Late embryogenesis abundant protein OS=Quercus suber OX=58331 GN=CFP56_34419 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.4e-62
Identity = 133/221 (60.18%), Postives = 180/221 (81.45%), Query Frame = 0 

Query: 1   MADKDQARPLAPTTHCRPSSDDYQEQLHLKRIQRRRFIKLFCFIIGLLIILSVXXXXXLM 60
           M +K+Q RPLAP T  RPSSD  +  LH+++++ +R IK  C II  L++L  XXXXX +
Sbjct: 1   MVEKEQVRPLAPATD-RPSSDHDEAALHIQKLKHKRCIKC-CGIISALLLLQAXXXXXXI 60

Query: 61  FTLFQVKDPIIQMNKISITKLELINGVIPKPGSNVSLTADVSVKNPNVASFKYSNTTTTL 120
           FT+F+VKDPII+MN ++ITKLELIN  IPKPG N+SL A+VSVKNPNVASFKYSNTTTTL
Sbjct: 61  FTVFKVKDPIIKMNGVTITKLELINNTIPKPGVNMSLIANVSVKNPNVASFKYSNTTTTL 120

Query: 121 YINETVIGEARGPPGQAKARRTVQMNLTINIVVDRLLL--NLNSDMSSGKLRLRSFSRVP 180
           + + +V+GEARGPPG+AK RRT+QMN+T++I+ DRL+   NL SD+ SG L + S+S++P
Sbjct: 121 FYHGSVVGEARGPPGKAKPRRTMQMNITVDIITDRLISNPNLQSDVGSGLLTMSSYSKIP 180

Query: 181 GRVKLLHILRRNIVVKMNCTSTINIFNKSIEDQNCKRKVKI 220
           GRVK+L I+ +++VVKMNCT T+NI +++I+DQ CKRKV++
Sbjct: 181 GRVKMLSIINKHVVVKMNCTMTVNISSQAIQDQKCKRKVRL 219

The following BLAST results are available for this feature:
BLAST of Carg26025 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959336.12.1e-10594.06uncharacterized protein LOC111460339 [Cucurbita moschata][more]
XP_023548342.11.5e-10091.78uncharacterized protein LOC111807010 [Cucurbita pepo subsp. pepo][more]
XP_023006660.15.3e-8582.65uncharacterized protein LOC111499318 [Cucurbita maxima][more]
XP_011656360.16.8e-8074.89PREDICTED: uncharacterized protein LOC105435724 [Cucumis sativus] >KGN45696.1 hy... [more]
XP_008458164.11.2e-7672.60PREDICTED: uncharacterized protein LOC103497685 [Cucumis melo][more]
BLAST of Carg26025 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46150.15.8e-4141.96Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT3G54200.13.6e-1932.30Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT4G23610.19.3e-1529.90Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT3G05975.19.6e-1224.32Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT3G44380.11.1e-0428.10Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
BLAST of Carg26025 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg26025 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KD33|A0A0A0KD33_CUCSA4.5e-8074.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006820 PE=4 SV=1[more]
tr|A0A1S3C8G8|A0A1S3C8G8_CUCME7.9e-7772.60uncharacterized protein LOC103497685 OS=Cucumis melo OX=3656 GN=LOC103497685 PE=... [more]
tr|A0A2P6SHY2|A0A2P6SHY2_ROSCH1.7e-6356.11Putative Late embryogenesis abundant protein, LEA-14 OS=Rosa chinensis OX=74649 ... [more]
tr|A0A2I4GMG7|A0A2I4GMG7_9ROSI2.9e-6356.56uncharacterized protein LOC109009171 OS=Juglans regia OX=51240 GN=LOC109009171 P... [more]
tr|A0A2P4LEH1|A0A2P4LEH1_QUESU1.4e-6260.18Late embryogenesis abundant protein OS=Quercus suber OX=58331 GN=CFP56_34419 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26025-RACarg26025-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 101..197
e-value: 9.5E-11
score: 42.0
NoneNo IPR availablePANTHERPTHR31852FAMILY NOT NAMEDcoord: 1..218
NoneNo IPR availablePANTHERPTHR31852:SF52LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEINcoord: 1..218
NoneNo IPR availableSUPERFAMILYSSF117070LEA14-likecoord: 56..158