Carg25741 (gene) Silver-seed gourd

Overview
NameCarg25741
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Description60S ribosomal protein L35a
LocationCucurbita_argyrosperma_scaffold_244 : 293269 .. 295503 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCATTTTGACCCTCAAATCCCCGTTATAAAAAGTTCCGTCTTCTTCAAGTGGTCACCTTCTTCTCTGAACCGCAGCTTCATCTTCCTCTCTTCAACCTGCAAATCTAAGGTGATTATTCCTCAAAGATTTCCATTTTTTTTCTTACCAATAGCATTTACATTTGGTTACCGATCTTAGTTCTTCGCGAGTCTTGAACAAGTCATTTTACAGAATCCTAACCTGCGGCAGCCATGGTGAAGGGAAGTCAGGGAGAAAGAATCAGGTCTCTCTCCGAACCCTAGATCAACCCGATTTGATTACTTGAATTTCTTTGTTTTTTTTTTTTACCGCTTTGCTAATGTATTGTGTTTGTTTCAGACTCTACGTCAGAGGAACAGTCCTTGGGTACAAAAGGTAATTGGTTTCGCTTCGATTATCGATTATTGGACTGTTTTTTTTTTTTTTCGTGATGAGTACTTTTTAAGTGTAGTTTGATGCCAGAAAATTGATGAAACTGGATTTGAAATATGCGTTAGGTTTAGTGGTTAATTAGTGAGGGATGCCATAGTTTGTGTGGGAGCTAAGAATTTGGAATTGGTATTTAGGTCCAAGTCAAACCAGTATCCAAGAACATCACTGATTCAGATTGAAGGTGTGAATACCAAGGAAGAGGTTGCATGGTATGCTGGAAAACGGTTGGCATATATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTATCGGTGCATTTGGGGCAAGGTATCCAGACCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTTAAGTCAAACTTGCCCCCAAAATCCATGGTAATGTGGAATGAGTAGCTGTTTCTTCATATTTGTTCAATGATGGTATATTGGGATAGGTTTTCTGATTGAATTTCTGGACAATTTTGCAGGGTGATAAAATTAGGGTATTTATGTACCCCAGCAACATATGAGGTACACTCCCCTCCACCACTCTTTTTGATGTAGAAAGGGAAAAACCATCCATGCTGTTCATCTTAATGTGATAAAAACACAGTATACTTGATATTTAATGGGATTTGTGATGTAGTCCTGTGATCATTATGTCATTTTAATTAGCATTTCATTAATTTTCTGTAATATGTTTTTCTCAATCTTTGTTTTTGTTGTTCTGTTCCTGGGTGTTGTTATTTATCTTATGTATGTTTATTTCAGAATGATTATTCATGGATTCTTTTGTCTCTTCAATCTCTAATTTGGAGCATGATGGCAATCAGATGTTCATGAGATGTCTTTATGTATTCTTCCAATAGTGCAGTGCGTTTTATAGGGCTGCAATACTGTGCTGTTTCGTGTTCCGAAGATTCGATTTATATTTTCTAAAATCCTAATCTGTTACACAGATTTTTTATTTTACCTTAATGTCTTTGGCTCTAGCTTTATGTCTTGTCCTCACAATGGAATTTTTAGTTTTACTTTTGGACCAATTTCATATAATTCTTTTTTTCTAAGTTCATTTCTTGACAATTCACATAATCCAGTCCATACCTGTTATAGATCGGATATCTTTCTCTTGTCTGGTTATACTTTTCTAGCCCTGGTTCTAGCAACCTCTGCGTCCTGTAGTACTCCGTTGTATTTCATATGAACTGATGGAAGCCAGATTGGATTCTTAGTTGACTTGGATCTATCTATATTTTCCTTTTATTGTTTTGTTTTTACAACACAGTTCATGTTTAGTTGATAAGTTCAGGGTAAACTTCATTTCTCGATTATCGACAAACGAAAATCATTCTGCCATGTCGTTTTCTTAAAATGGATTTTTCAACGTCGTGAATCAAGACACCACAAATTGTTATTATTTGACCAGTGTTCATCCATGAATGGGGTTTCATTTCCTATACCGATTCTGTCGTAGAACCTTCGTGTGTCGTGATCGTGAATCTAATTAATATCCGAATCTGTAGGAGTGTTTGTCTAAACTTATAAAACCAGACGCCTTCACTTCTAAATGTTTTACTGCTTAGTTTTTGTAGCGTTGTTTCTGATCTCTTTTTTATTTTTTTGCAGTTCCTCAAATCAGCTAGCTAGAGGGGTAAGGTTTCGTTTCTTTCTCGACTTGATGGATCGATAGTTTTCTTTTACTTTACTGGACCCAATGTTTAGATGATGATGTTTTGATGTGAAACTTGACTAAATTTGGAAGGATCATTATGGAATCATACTTTCAATTTTGACCTAGTTTAATTTAATGTCAA

mRNA sequence

AAATCATTTTGACCCTCAAATCCCCGTTATAAAAAGTTCCGTCTTCTTCAAGTGGTCACCTTCTTCTCTGAACCGCAGCTTCATCTTCCTCTCTTCAACCTGCAAATCTAAGGTGATTATTCCTCAAAGATTTCCATTTTTTTTCTTACCAATAGCATTTACATTTGGTTACCGATCTTAGTTCTTCGCGAGTCTTGAACAAGTCATTTTACAGAATCCTAACCTGCGGCAGCCATGGTGAAGGGAAGTCAGGGAGAAAGAATCAGACTCTACGTCAGAGGAACAGTCCTTGGGTACAAAAGGTCCAAGTCAAACCAGTATCCAAGAACATCACTGATTCAGATTGAAGGTGTGAATACCAAGGAAGAGGTTGCATGGTATGCTGGAAAACGGTTGGCATATATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTATCGGTGCATTTGGGGCAAGGTATCCAGACCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTTAAGTCAAACTTGCCCCCAAAATCCATGGGTGATAAAATTAGGGTATTTATGTACCCCAGCAACATATGAGTTCCTCAAATCAGCTAGCTAGAGGGGTAAGGTTTCGTTTCTTTCTCGACTTGATGGATCGATAGTTTTCTTTTACTTTACTGGACCCAATGTTTAGATGATGATGTTTTGATGTGAAACTTGACTAAATTTGGAAGGATCATTATGGAATCATACTTTCAATTTTGACCTAGTTTAATTTAATGTCAA

Coding sequence (CDS)

ATGGTGAAGGGAAGTCAGGGAGAAAGAATCAGACTCTACGTCAGAGGAACAGTCCTTGGGTACAAAAGGTCCAAGTCAAACCAGTATCCAAGAACATCACTGATTCAGATTGAAGGTGTGAATACCAAGGAAGAGGTTGCATGGTATGCTGGAAAACGGTTGGCATATATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTATCGGTGCATTTGGGGCAAGGTATCCAGACCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTTAAGTCAAACTTGCCCCCAAAATCCATGGGTGATAAAATTAGGGTATTTATGTACCCCAGCAACATATGA

Protein sequence

MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI
Homology
[Close]
BLAST of Carg25741 vs. NCBI nr
Match: XP_022928725.1 (60S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_022928726.1 60S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_022928728.1 60S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_023522925.1 60S ribosomal protein L35a-1-like [Cucurbita pepo subsp. pepo] >XP_023543608.1 60S ribosomal protein L35a-1-like [Cucurbita pepo subsp. pepo] >XP_023543609.1 60S ribosomal protein L35a-1-like [Cucurbita pepo subsp. pepo] >XP_023543610.1 60S ribosomal protein L35a-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.0 bits (593), Expect = 4.9e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. NCBI nr
Match: XP_008442180.1 (PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 1.1e-57
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. NCBI nr
Match: XP_022967923.1 (60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_022967925.1 60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_022967926.1 60S ribosomal protein L35a-1-like [Cucurbita maxima])

HSP 1 Score: 231.1 bits (588), Expect = 1.8e-57
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. NCBI nr
Match: XP_011653915.1 (PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 4.1e-57
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGRQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. NCBI nr
Match: XP_022925254.1 (60S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_022925256.1 60S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_022966497.1 60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_022966498.1 60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_023518922.1 60S ribosomal protein L35a-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.6 bits (579), Expect = 2.0e-56
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKGS+GER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           KVKQNGTHYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMGDK+RVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. TAIR10
Match: AT1G07070.1 (Ribosomal protein L35Ae family protein)

HSP 1 Score: 209.1 bits (531), Expect = 1.4e-54
Identity = 93/112 (83.04%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           K K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG ++RVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. TAIR10
Match: AT1G74270.1 (Ribosomal protein L35Ae family protein)

HSP 1 Score: 209.1 bits (531), Expect = 1.4e-54
Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           K K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG ++RVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. TAIR10
Match: AT1G41880.1 (Ribosomal protein L35Ae family protein)

HSP 1 Score: 205.7 bits (522), Expect = 1.5e-53
Identity = 94/111 (84.68%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 2   VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAK 61
           +KG QGER+RLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
            K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG ++RVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Carg25741 vs. TAIR10
Match: AT3G55750.1 (Ribosomal protein L35Ae family protein)

HSP 1 Score: 205.3 bits (521), Expect = 2.0e-53
Identity = 93/111 (83.78%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 2   VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAK 61
           +KG QGER+RLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
            K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG ++RVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Carg25741 vs. Swiss-Prot
Match: sp|Q9LMK0|R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.5e-53
Identity = 93/112 (83.04%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           K K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG ++RVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. Swiss-Prot
Match: sp|Q9C912|R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.5e-53
Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           K K+NG+HYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG ++RVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. Swiss-Prot
Match: sp|Q9FZH0|R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.7e-52
Identity = 94/111 (84.68%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 2   VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAK 61
           +KG QGER+RLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
            K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG ++RVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Carg25741 vs. Swiss-Prot
Match: sp|P51422|R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 205.3 bits (521), Expect = 3.5e-52
Identity = 93/111 (83.78%), Postives = 104/111 (93.69%), Query Frame = 0 

Query: 2   VKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAK 61
           +KG QGER+RLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
            K+NG+HYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG ++RVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Carg25741 vs. Swiss-Prot
Match: sp|P41056|RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL33B PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-27
Identity = 57/105 (54.29%), Postives = 76/105 (72.38%), Query Frame = 0 

Query: 8   ERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGT 67
           E  RLYV+G  L Y+RSK    P  SLI+IEGV T +E  +Y GKR+AY+Y+A  +  G+
Sbjct: 3   ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGS 62

Query: 68  HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
             R +WGKV+R HGNSG+VRA F++NLP K+ G  +R+F+YPSNI
Sbjct: 63  KIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107

[Close]
BLAST of Carg25741 vs. TrEMBL
Match: tr|A0A1S3B4N4|A0A1S3B4N4_CUCME (60S ribosomal protein L35a-1-like OS=Cucumis melo OX=3656 GN=LOC103486112 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.2e-58
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTREEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI
Sbjct: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. TrEMBL
Match: tr|A0A1U8M9X3|A0A1U8M9X3_GOSHI (60S ribosomal protein L35a-1 OS=Gossypium hirsutum OX=3635 GN=LOC107935464 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.7e-55
Identity = 101/112 (90.18%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSLIQIEGVNTKEEVAWYAGKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           KVK+NG+HYRCIWGKV+RPHGNSG+VRAKFKSNLPPKSMGD++RVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. TrEMBL
Match: tr|A0A2P5VNL4|A0A2P5VNL4_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA14854 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.7e-55
Identity = 101/112 (90.18%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSLIQIEGVNTKEEVAWYAGKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           KVK+NG+HYRCIWGKV+RPHGNSG+VRAKFKSNLPPKSMGD++RVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. TrEMBL
Match: tr|A0A2P2JDG1|A0A2P2JDG1_RHIMU (60S ribosomal protein L35aA OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.7e-55
Identity = 101/112 (90.18%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSL+QIEGVNTKEEVAWYAGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNTKEEVAWYAGKRLAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           KVK+NG+HYRCIWGKV+RPHGNSG+VRAKFKSNLPPKSMGD++RVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Carg25741 vs. TrEMBL
Match: tr|A0A0D2VTL7|A0A0D2VTL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G278900 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.7e-55
Identity = 101/112 (90.18%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MVKGSQGERIRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKA 60
           MVKG QGER+RLYVRGT+LGYKRSKSNQYP TSLIQIEGVNTKEEVAWYAGKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKA 60

Query: 61  KVKQNGTHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKIRVFMYPSNI 113
           KVK+NG+HYRCIWGKV+RPHGNSG+VRAKFKSNLPPKSMGD++RVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

The following BLAST results are available for this feature:
BLAST of Carg25741 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022928725.14.9e-58100.0060S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_022928726.1 60S ribos... [more]
XP_008442180.11.1e-5799.11PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo][more]
XP_022967923.11.8e-5799.1160S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_022967925.1 60S ribosom... [more]
XP_011653915.14.1e-5798.21PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis sativus][more]
XP_022925254.12.0e-5696.4360S ribosomal protein L35a-1-like [Cucurbita moschata] >XP_022925256.1 60S ribos... [more]
BLAST of Carg25741 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07070.11.4e-5483.04Ribosomal protein L35Ae family protein[more]
AT1G74270.11.4e-5483.93Ribosomal protein L35Ae family protein[more]
AT1G41880.11.5e-5384.68Ribosomal protein L35Ae family protein[more]
AT3G55750.12.0e-5383.78Ribosomal protein L35Ae family protein[more]
BLAST of Carg25741 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LMK0|R35A1_ARATH2.5e-5383.0460S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=... [more]
sp|Q9C912|R35A3_ARATH2.5e-5383.9360S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=... [more]
sp|Q9FZH0|R35A2_ARATH2.7e-5284.6860S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=... [more]
sp|P51422|R35A4_ARATH3.5e-5283.7860S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=... [more]
sp|P41056|RL33B_YEAST1.0e-2754.2960S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2... [more]
BLAST of Carg25741 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B4N4|A0A1S3B4N4_CUCME7.2e-5899.1160S ribosomal protein L35a-1-like OS=Cucumis melo OX=3656 GN=LOC103486112 PE=3 S... [more]
tr|A0A1U8M9X3|A0A1U8M9X3_GOSHI9.7e-5590.1860S ribosomal protein L35a-1 OS=Gossypium hirsutum OX=3635 GN=LOC107935464 PE=3 ... [more]
tr|A0A2P5VNL4|A0A2P5VNL4_GOSBA9.7e-5590.18Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA14854 PE=3 SV... [more]
tr|A0A2P2JDG1|A0A2P2JDG1_RHIMU9.7e-5590.1860S ribosomal protein L35aA OS=Rhizophora mucronata OX=61149 PE=3 SV=1[more]
tr|A0A0D2VTL7|A0A0D2VTL7_GOSRA9.7e-5590.18Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G278900 PE=3 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel_sf
IPR018266Ribosomal_L35Ae_CS
IPR038661L35A_sf
IPR001780Ribosomal_L35A
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25741-RACarg25741-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001780Ribosomal protein L35APFAMPF01247Ribosomal_L35Aecoord: 12..106
e-value: 3.5E-44
score: 148.8
IPR001780Ribosomal protein L35APANTHERPTHR1090260S RIBOSOMAL PROTEIN L35Acoord: 1..112
IPR001780Ribosomal protein L35APRODOMPD012670coord: 14..105
e-value: 2.0E-43
score: 437.0
IPR001780Ribosomal protein L35AHAMAPMF_00573Ribosomal_L35Aecoord: 14..106
score: 25.259
IPR038661Ribosomal protein L35A superfamilyGENE3DG3DSA:2.40.10.190coord: 2..112
e-value: 8.3E-49
score: 165.9
NoneNo IPR availablePANTHERPTHR10902:SF1060S RIBOSOMAL PROTEIN L35A-1-RELATEDcoord: 1..112
IPR018266Ribosomal protein L35Ae, conserved sitePROSITEPS01105RIBOSOMAL_L35AEcoord: 74..95
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILYSSF50447Translation proteinscoord: 12..106