Carg25627 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTGCAATGGCCGTCGCTTCGAGTATTCTCTCATTTCTTCCTTCGTTTTCATCTCTAGATCCATGGCCGAAGACGCCGCACTTAAATCCTCTTTGGTTTTCTTGGCCGCCGCCGTCGTTCTCGTCGGAATCTCCACGCATTCCTTCAAGAAAATGGCCGTAACTTATCTGGTCGGCGTTTTCGCCATCGCCGGCATCCTCTTGCCAGACTGGTGCTTCTTCGACCGCGATTTCTCTCGGTGGATTTCTCCAGTCACCGAAGAGGAAAGGGAATCGTATCGGATCTCGACTGCATCTCGGAATCCAAGGTCGGTTACTTTTGATTCTTTTTTATCTTCGCGCTCTGTTTCTGTTGTTTGATTGATTCCAGAGCAAAAATTGTGCGAAAAAAATTAGGTTAAGTGATTTTGAAGCCTTTGCCAAATCAATTTCATAATCGTGTTTATTGAAACTTCGTTTGGTTTTTGAAAGTGATTTTTCGAACTCTTCATTTGAAGGCATGAAACTGTTGCAGGTTTAGGATTTATCCAAAATTGTGCGAGAAAGTTAGGTTAAGTGATTTTGCAGTCTTTGCCAAATCAAATTCGTAATCGTGTTTATTGAAACTTCTTTTGGTTTTTGGAAGTGATTTTTCGAACTCTTCATTTGAATGCATGGAAACTGTTGCAGGTTTAGGATTTATCCAAAATTGTGCGAGAAAGTTAGGTTAAGTGATTATGCAGTCTTTGCCAAATCAAATTCGTAATCGTGTTTATGGAAACTTCTTTTGGTTTTTGAAAGTGATTTTTCGAAATTTTCATTAGAATTCTTGGAAACTGTTGCAGGTTTAGGATTTATCCAATCAGACTGGCTGTGTACGCCATAGTTTACAGTGTTGCGCTATACAAGTGGTGGAAATTCGTTTCCACCTAAATCCTCCATCATATCTGTAGTTATTATCTGCTATAGAATTATCTTTTTTTTTTTTGGAAAAAATAAAAATAAATTCCCCCAAA TCTGCAATGGCCGTCGCTTCGAGTATTCTCTCATTTCTTCCTTCGTTTTCATCTCTAGATCCATGGCCGAAGACGCCGCACTTAAATCCTCTTTGGTTTTCTTGGCCGCCGCCGTCGTTCTCGTCGGAATCTCCACGCATTCCTTCAAGAAAATGGCCGTAACTTATCTGGTCGGCGTTTTCGCCATCGCCGGCATCCTCTTGCCAGACTGGTGCTTCTTCGACCGCGATTTCTCTCGGTGGATTTCTCCAGTCACCGAAGAGGAAAGGGAATCGTATCGGATCTCGACTGCATCTCGGAATCCAAGGTTTAGGATTTATCCAATCAGACTGGCTGTGTACGCCATAGTTTACAGTGTTGCGCTATACAAGTGGTGGAAATTCGTTTCCACCTAAATCCTCCATCATATCTGTAGTTATTATCTGCTATAGAATTATCTTTTTTTTTTTTGGAAAAAATAAAAATAAATTCCCCCAAA ATGGCCGAAGACGCCGCACTTAAATCCTCTTTGGTTTTCTTGGCCGCCGCCGTCGTTCTCGTCGGAATCTCCACGCATTCCTTCAAGAAAATGGCCGTAACTTATCTGGTCGGCGTTTTCGCCATCGCCGGCATCCTCTTGCCAGACTGGTGCTTCTTCGACCGCGATTTCTCTCGGTGGATTTCTCCAGTCACCGAAGAGGAAAGGGAATCGTATCGGATCTCGACTGCATCTCGGAATCCAAGGTTTAGGATTTATCCAATCAGACTGGCTGTGTACGCCATAGTTTACAGTGTTGCGCTATACAAGTGGTGGAAATTCGTTTCCACCTAA MAEDAALKSSLVFLAAAVVLVGISTHSFKKMAVTYLVGVFAIAGILLPDWCFFDRDFSRWISPVTEEERESYRISTASRNPRFRIYPIRLAVYAIVYSVALYKWWKFVST
BLAST of Carg25627 vs. NCBI nr
Match: XP_023524429.1 (signal peptidase complex-like protein DTM1 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.9 bits (546), Expect = 1.3e-52 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Carg25627 vs. NCBI nr
Match: XP_022940831.1 (signal peptidase complex-like protein DTM1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 213.0 bits (541), Expect = 5.1e-52 Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Carg25627 vs. NCBI nr
Match: XP_022981833.1 (signal peptidase complex-like protein DTM1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 211.5 bits (537), Expect = 1.5e-51 Identity = 107/110 (97.27%), Postives = 107/110 (97.27%), Query Frame = 0
BLAST of Carg25627 vs. NCBI nr
Match: XP_022152589.1 (signal peptidase complex-like protein DTM1 [Momordica charantia]) HSP 1 Score: 182.6 bits (462), Expect = 7.4e-43 Identity = 92/110 (83.64%), Postives = 98/110 (89.09%), Query Frame = 0
BLAST of Carg25627 vs. NCBI nr
Match: XP_008466235.1 (PREDICTED: uncharacterized protein LOC103503709 [Cucumis melo]) HSP 1 Score: 175.6 bits (444), Expect = 9.0e-41 Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 0
BLAST of Carg25627 vs. TAIR10
Match: AT1G34640.1 (peptidases) HSP 1 Score: 116.3 bits (290), Expect = 1.2e-26 Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 0
BLAST of Carg25627 vs. Swiss-Prot
Match: sp|Q7XI45|DTM1_ORYSJ (Signal peptidase complex-like protein DTM1 OS=Oryza sativa subsp. japonica OX=39947 GN=DTM1 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 0
BLAST of Carg25627 vs. TrEMBL
Match: tr|A0A1S3CQR6|A0A1S3CQR6_CUCME (uncharacterized protein LOC103503709 OS=Cucumis melo OX=3656 GN=LOC103503709 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 6.0e-41 Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 0
BLAST of Carg25627 vs. TrEMBL
Match: tr|A0A0A0LGU6|A0A0A0LGU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889170 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 6.6e-40 Identity = 85/109 (77.98%), Postives = 94/109 (86.24%), Query Frame = 0
BLAST of Carg25627 vs. TrEMBL
Match: tr|W9RMI1|W9RMI1_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003402 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29 Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 0
BLAST of Carg25627 vs. TrEMBL
Match: tr|A0A2P5CKJ5|A0A2P5CKJ5_PARAD (Microsomal signal peptidase 12kDa subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_144620 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 9.0e-29 Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 0
BLAST of Carg25627 vs. TrEMBL
Match: tr|A0A2I0KZJ9|A0A2I0KZJ9_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_005774 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28 Identity = 63/109 (57.80%), Postives = 82/109 (75.23%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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