Carg25264 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25264
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	auxin-responsive protein SAUR32
Location	Cucurbita_argyrosperma_scaffold_249 : 44062 .. 44499 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAACAACAAAAGGTTTCAGATTGAAAATCAAGCTTCCCAAGATCTTCAAACGGAGAACCACCTCCAACCCTTTTTCCAAGCTCTTCGCCCTCGCTACGGCGTCGTTTTCTCGCCCGGATGCGTACTCCCGGCTGAACCGGGTCCGGAACGGACCGGAAGCGGCGGCGCCGAAGGGGTATTTGGCCGTGCACGTCGGTGGAGCGGAGGATGAAAGGGAGAGACATCTTGTGCCGCTGATTTACTTCAACCATCCGATGTTTGGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTCAGTATCCGGGTCGGATCGTCATTCCGGTTGATGTGTCGGAGTTTGAGGAGGTTACCAATTGCATTGCCACGGCGGAGTACGGCTGCCGCAAACGTCGTAGCGGTGGCTACCGGTGGCGGAGCTGTGGAAAGTAG

mRNA sequence

ATGCGAACAACAAAAGGTTTCAGATTGAAAATCAAGCTTCCCAAGATCTTCAAACGGAGAACCACCTCCAACCCTTTTTCCAAGCTCTTCGCCCTCGCTACGGCGTCGTTTTCTCGCCCGGATGCGTACTCCCGGCTGAACCGGGTCCGGAACGGACCGGAAGCGGCGGCGCCGAAGGGGTATTTGGCCGTGCACGTCGGTGGAGCGGAGGATGAAAGGGAGAGACATCTTGTGCCGCTGATTTACTTCAACCATCCGATGTTTGGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTCAGTATCCGGGTCGGATCGTCATTCCGGTTGATGTGTCGGAGTTTGAGGAGGTTACCAATTGCATTGCCACGGCGGAGTACGGCTGCCGCAAACGTCGTAGCGGTGGCTACCGGTGGCGGAGCTGTGGAAAGTAG

Coding sequence (CDS)

ATGCGAACAACAAAAGGTTTCAGATTGAAAATCAAGCTTCCCAAGATCTTCAAACGGAGAACCACCTCCAACCCTTTTTCCAAGCTCTTCGCCCTCGCTACGGCGTCGTTTTCTCGCCCGGATGCGTACTCCCGGCTGAACCGGGTCCGGAACGGACCGGAAGCGGCGGCGCCGAAGGGGTATTTGGCCGTGCACGTCGGTGGAGCGGAGGATGAAAGGGAGAGACATCTTGTGCCGCTGATTTACTTCAACCATCCGATGTTTGGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTCAGTATCCGGGTCGGATCGTCATTCCGGTTGATGTGTCGGAGTTTGAGGAGGTTACCAATTGCATTGCCACGGCGGAGTACGGCTGCCGCAAACGTCGTAGCGGTGGCTACCGGTGGCGGAGCTGTGGAAAGTAG

Protein sequence

MRTTKGFRLKIKLPKIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVTNCIATAEYGCRKRRSGGYRWRSCGK

Homology

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BLAST of Carg25264 vs. NCBI nr
Match: XP_022923260.1 (auxin-responsive protein SAUR32-like [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 8.7e-76
Identity = 142/145 (97.93%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MRTTKGFRLKIKLPKIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKG 60
           MRTTKGFRLKIKLP IFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKG
Sbjct: 1   MRTTKGFRLKIKLPNIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKG 60

Query: 61  YLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT 120
           YLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT
Sbjct: 61  YLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT 120

Query: 121 NCIATAEYGCRKRRSGGYRWRSCGK 146
           NCIATAEYGCR R SGGYRWRSCGK
Sbjct: 121 NCIATAEYGCRNRHSGGYRWRSCGK 145

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BLAST of Carg25264 vs. NCBI nr
Match: XP_023552967.1 (auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.0 bits (733), Expect = 3.7e-74
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MRTTKGFRLKIKLPKIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKG 60
           MRTTKGFRLKIKLP IFKRRTTSNPFSKLFALATASFSR +AYSRLNRVRNGPEAAAPKG
Sbjct: 1   MRTTKGFRLKIKLPNIFKRRTTSNPFSKLFALATASFSRRNAYSRLNRVRNGPEAAAPKG 60

Query: 61  YLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT 120
           YLAVHVGG EDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT
Sbjct: 61  YLAVHVGGLEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT 120

Query: 121 NCIATAEYGCRKRRSGGYRWRSCGK 146
           NCIATAEYGCR RRSGGYRWRSCGK
Sbjct: 121 NCIATAEYGCRNRRSGGYRWRSCGK 145

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BLAST of Carg25264 vs. NCBI nr
Match: XP_008448892.1 (PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 5.7e-51
Identity = 113/151 (74.83%), Postives = 118/151 (78.15%), Query Frame = 0


Query: 2   RTTKGFRLKIKLPKIFKRR-------TTSNPFSKLFALATASFSRPDAYSRLNRVRNGPE 61
           R TKGF+LKIKL KIFK R       T SNPFSKLF+LATA FSR   Y+RLNRVR+ P 
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTPA 62

Query: 62  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVS 121
            A PKGYLAVHVGG EDE ERHLVP+IYFNHPMF KLLQAAE IYGF YPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVTNCIATAEYGCRKRRSGGYRWRSCGK 146
           EFEEV N IA AE G   RRSGGYR R CGK
Sbjct: 123 EFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

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BLAST of Carg25264 vs. NCBI nr
Match: XP_004147976.1 (PREDICTED: uncharacterized protein LOC101210462 [Cucumis sativus] >KGN55902.1 hypothetical protein Csa_3G035310 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 4.1e-49
Identity = 110/152 (72.37%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 2   RTTKGFRLKIKLPKIFKRRTT-------SNPFSKLFALATASFSRPDAYSRLNRVRNGPE 61
           RTTKGF+LK+KL K+FK RT        SNPFSKLF+LAT  FSRP  Y+RLNRVR+ P 
Sbjct: 3   RTTKGFKLKLKLLKVFKWRTPFFNLHTYSNPFSKLFSLATDPFSRPVRYARLNRVRSTPP 62

Query: 62  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVS 121
            A PKGYLAVHVGG E+ERERHLVP+IYFNHPMF KLLQAAE IYGF YPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPENERERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVTNCIATAEYG-CRKRRSGGYRWRSCGK 146
           EFEEV N IA  E G C  RR G  RWR CGK
Sbjct: 123 EFEEVKNGIAATENGRCCPRRGGYRRWR-CGK 153

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BLAST of Carg25264 vs. NCBI nr
Match: XP_023005960.1 (auxin-induced protein 15A-like [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 2.8e-42
Identity = 97/145 (66.90%), Postives = 107/145 (73.79%), Query Frame = 0


Query: 1   MRTTKGFRLKIKLPKIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKG 60
           MRTT+GF+LKIKL KIF    +SN FS LF+LATASFSR   Y RL             G
Sbjct: 1   MRTTRGFKLKIKLLKIFNLPPSSNLFSNLFSLATASFSRRLGYGRL-EXXXXXXXXXXXG 60

Query: 61  YLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVT 120
           YL+VHVGG ED+ E HLVP+IYFNHP+FGKLLQAAERIYGF YPGRIVIPV VSEFEEV 
Sbjct: 61  YLSVHVGGPEDQTESHLVPVIYFNHPLFGKLLQAAERIYGFDYPGRIVIPVGVSEFEEVR 120

Query: 121 NCIATAEYGCRKRRSGGYRWRSCGK 146
           NCIA AE+   +RRSGG R R  GK
Sbjct: 121 NCIAAAEHSRSRRRSGGCRHRLWGK 144

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BLAST of Carg25264 vs. TAIR10
Match: AT4G22620.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.4 bits (246), Expect = 2.0e-21
Identity = 61/157 (38.85%), Postives = 93/157 (59.24%), Query Frame = 0


Query: 1   MRTTKGFRLKIKLPKIFK-----RRTTS----------NPFSKLFALATASFSRPDAYSR 60
           M+  +GF++  +  KIFK     RR  +          NP +K+++LA     R    +R
Sbjct: 1   MKRLRGFKIGHRFVKIFKWIIRSRRNQTGKRQCLTGILNPVTKIYSLARRCLRR--GANR 60

Query: 61  L--------NRVRNGPEA-AAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAE 120
           L         R+ N P+    P+G+L VHVG + ++  R +VP+IYFNHP+FG+LL+ AE
Sbjct: 61  LCGGMKPGQTRLGNEPKTPTVPRGHLVVHVGESGEDTRRVVVPVIYFNHPLFGELLEQAE 120

Query: 121 RIYGFQYPGRIVIPVDVSEFEEVTNCIATAEYGCRKR 134
           R+YGF+ PGRI+IP  VS+FE+V   IA  ++ CR++
Sbjct: 121 RVYGFEQPGRIMIPCRVSDFEKVQMRIAAWDH-CRRK 154

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BLAST of Carg25264 vs. TAIR10
Match: AT4G12410.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 57/154 (37.01%), Postives = 85/154 (55.19%), Query Frame = 0


Query: 1   MRTTKGFRLKIKLPKIFK-------RRTTSNPFSKLFALAT-----------ASFSRPDA 60
           M+  +GF++  +  KIFK           +NP + + +LA             S   P  
Sbjct: 1   MKRVRGFKIGHRFVKIFKWIPRNRCPTRITNPVTGIRSLARCLSRGAKRLCGGSKKNPGQ 60

Query: 61  YS-RLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGF 120
              RL +         P+G+L VHVG ++D+  R +VP+IYFNHP+FG+LL+ AER++GF
Sbjct: 61  NQIRLGKDPKKSNRVVPRGHLVVHVGESDDDTRRVVVPVIYFNHPLFGELLEQAERVHGF 120

Query: 121 QYPGRIVIPVDVSEFEEVTNCIATAEYGCRKRRS 136
             PGRI IP  VS+FE+V   IA  ++ CR++ S
Sbjct: 121 DQPGRITIPCRVSDFEKVQLRIAAWDH-CRRKNS 153

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BLAST of Carg25264 vs. TAIR10
Match: AT2G45210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 77.4 bits (189), Expect = 8.0e-15
Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 0


Query: 38  SRPDAYSRLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAER 97
           +R  AY  ++  +  P    P+G+LA++VG  + +  R LVP++YFNHP+FG+LL+ AE+
Sbjct: 63  TRRSAYIPVDHKKADP---VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEK 122

Query: 98  IYGFQYPGRIVIPVDVSEFEEVTNCIAT 126
            YGF + G I IP   S+FE V   IA+
Sbjct: 123 EYGFCHEGGITIPCLYSDFERVKTRIAS 147

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BLAST of Carg25264 vs. TAIR10
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 73.9 bits (180), Expect = 8.9e-14
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 49  VRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIV 108
           +R  P+   PKG+ AV++G  + + +R LVP++YFNHP+FG+LL+ AE  +GF   G I 
Sbjct: 81  IREKPD-PVPKGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGELLREAEEEFGFSQEGGIT 140

Query: 109 IPVDVSEFEEVTNCIATAEYGCR 132
           IP   S+F+ V   I +    C+
Sbjct: 141 IPCPYSDFKRVQTRIESGSGFCK 162

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BLAST of Carg25264 vs. TAIR10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 58  PKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFE 117
           PKG LA+ VG  E+E++R +VP+ YFNHP+F +LL+ AE  YGF+  G I IP  V  F 
Sbjct: 31  PKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVFR 90

Query: 118 EVTNCI 124
            V + I
Sbjct: 91  YVQDMI 96

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BLAST of Carg25264 vs. Swiss-Prot
Match: sp|O22150|SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-13
Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 0


Query: 38  SRPDAYSRLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAER 97
           +R  AY  ++  +  P    P+G+LA++VG  + +  R LVP++YFNHP+FG+LL+ AE+
Sbjct: 63  TRRSAYIPVDHKKADP---VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEK 122

Query: 98  IYGFQYPGRIVIPVDVSEFEEVTNCIAT 126
            YGF + G I IP   S+FE V   IA+
Sbjct: 123 EYGFCHEGGITIPCLYSDFERVKTRIAS 147

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BLAST of Carg25264 vs. Swiss-Prot
Match: sp|Q9ZUZ3|SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.9e-12
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 45  RLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYP 104
           +L+R ++      PKG LA+ VG   +E++R +VP++YFNHP+F +LL+ AE  YGF   
Sbjct: 12  QLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQK 71

Query: 105 GRIVIPVDVSEFEEV 120
           G I IP  V EF  V
Sbjct: 72  GTITIPCHVEEFRYV 86

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BLAST of Carg25264 vs. Swiss-Prot
Match: sp|P33081|AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-09
Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 45  RLNRVRNGPEAA-APKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQY 104
           RL  +R   +AA APKGYLAV+VG   ++ +R ++P+ Y N P F  LL  AE  +G+ +
Sbjct: 4   RLPGIRKASKAADAPKGYLAVYVG---EKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDH 63

Query: 105 P-GRIVIPVDVSEFEEVTNCI 124
           P G + IP     F+ +T+C+
Sbjct: 64  PMGGLTIPCSEDVFQCITSCL 81

[Close]

BLAST of Carg25264 vs. Swiss-Prot
Match: sp|Q9FK62|SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.3e-09
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 52  GPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYP-GRIVIP 111
           G  +AAPKG+LAV+VG  E +++R+LVP+ Y N P F  LL  +E  +GF +P G + IP
Sbjct: 19  GAGSAAPKGFLAVYVG--ESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIP 78

Query: 112 VDVSEFEEVTN 122
                F  VT+
Sbjct: 79  CPEDTFINVTS 87

[Close]

BLAST of Carg25264 vs. Swiss-Prot
Match: sp|Q9FJG0|SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.2e-09
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 55  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYP-GRIVIPVDV 114
           +AAPKG+LAV+VG  E +++R+LVP+ Y N P F  LL  +E  +GF +P G + IP   
Sbjct: 22  SAAPKGFLAVYVG--ESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPE 81

Query: 115 SEFEEVTN 122
             F  VT+
Sbjct: 82  DTFINVTS 87

[Close]

BLAST of Carg25264 vs. TrEMBL
Match: tr|A0A1S3BLN7|A0A1S3BLN7_CUCME (auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.8e-51
Identity = 113/151 (74.83%), Postives = 118/151 (78.15%), Query Frame = 0


Query: 2   RTTKGFRLKIKLPKIFKRR-------TTSNPFSKLFALATASFSRPDAYSRLNRVRNGPE 61
           R TKGF+LKIKL KIFK R       T SNPFSKLF+LATA FSR   Y+RLNRVR+ P 
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTPA 62

Query: 62  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVS 121
            A PKGYLAVHVGG EDE ERHLVP+IYFNHPMF KLLQAAE IYGF YPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVTNCIATAEYGCRKRRSGGYRWRSCGK 146
           EFEEV N IA AE G   RRSGGYR R CGK
Sbjct: 123 EFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

[Close]

BLAST of Carg25264 vs. TrEMBL
Match: tr|A0A0A0L5M2|A0A0A0L5M2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.7e-49
Identity = 110/152 (72.37%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 2   RTTKGFRLKIKLPKIFKRRTT-------SNPFSKLFALATASFSRPDAYSRLNRVRNGPE 61
           RTTKGF+LK+KL K+FK RT        SNPFSKLF+LAT  FSRP  Y+RLNRVR+ P 
Sbjct: 3   RTTKGFKLKLKLLKVFKWRTPFFNLHTYSNPFSKLFSLATDPFSRPVRYARLNRVRSTPP 62

Query: 62  AAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVS 121
            A PKGYLAVHVGG E+ERERHLVP+IYFNHPMF KLLQAAE IYGF YPGRIVIPVDVS
Sbjct: 63  VATPKGYLAVHVGGPENERERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVS 122

Query: 122 EFEEVTNCIATAEYG-CRKRRSGGYRWRSCGK 146
           EFEEV N IA  E G C  RR G  RWR CGK
Sbjct: 123 EFEEVKNGIAATENGRCCPRRGGYRRWR-CGK 153

[Close]

BLAST of Carg25264 vs. TrEMBL
Match: tr|A0A2P6P831|A0A2P6P831_ROSCH (Putative small auxin-up RNA OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0202161 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.8e-22
Identity = 69/167 (41.32%), Postives = 100/167 (59.88%), Query Frame = 0


Query: 1   MRTTKGFRLKI-KLPKIFK-----RR-------------TTSNPFSKLFALATA------ 60
           M+ ++GFRL++ KL KIFK     RR              T NP SK F LA +      
Sbjct: 6   MKKSRGFRLRVHKLVKIFKWIVRPRREPVRYKRLESPAARTYNPISKFFTLARSLRRGAK 65

Query: 61  SFSRPDA-YSRLNRV-RNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQ 120
               P++ Y R+ +    G     PKG++AV+VG ++D+ +R+LVP+IYFNHP+FG+LL+
Sbjct: 66  QLCFPNSGYMRVGQAPEEGKPVVVPKGHMAVYVGESDDDTQRYLVPVIYFNHPLFGELLK 125

Query: 121 AAERIYGFQYPGRIVIPVDVSEFEEVTNCIATAEYGCRKRRSGGYRW 141
            AE++YGF +PGRIVIP   SEFE+V   IA  ++   +RR+   R+
Sbjct: 126 EAEKVYGFNHPGRIVIPCGASEFEKVQMRIAAGDHCQWRRRNSNRRY 172

[Close]

BLAST of Carg25264 vs. TrEMBL
Match: tr|M5W8K9|M5W8K9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G076200 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.2e-22
Identity = 69/162 (42.59%), Postives = 94/162 (58.02%), Query Frame = 0


Query: 1   MRTTKGFRLKIKLPKIFK-----RRTTS------------NPFSKLFALA----TASFSR 60
           MR  +GFRL+ KL +IFK     R+  +            NP SK F LA      +   
Sbjct: 1   MRKNRGFRLRHKLVRIFKWIIRPRKDPNRCQRLEPPTQNYNPISKFFTLARFLRRGAKQL 60

Query: 61  PDAYSRLNRVRNGP-------EAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLL 120
             A S   R+R  P         + PKG+LAV+VG + D+ +R+LVP++YFNHP+FG LL
Sbjct: 61  CSANSGYIRIREAPVETKVAKPVSVPKGHLAVYVGESGDDTQRYLVPVMYFNHPLFGDLL 120

Query: 121 QAAERIYGFQYPGRIVIPVDVSEFEEVTNCIATAEYGCRKRR 135
           + AE++YGF +PGRIVIP +VSEFE+V   IA  +   R+RR
Sbjct: 121 KEAEKVYGFNHPGRIVIPCEVSEFEKVQMKIAAGDQCPRRRR 162

[Close]

BLAST of Carg25264 vs. TrEMBL
Match: tr|W9RGH3|W9RGH3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_019007 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.9e-21
Identity = 72/167 (43.11%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 1   MRTTKGFRLKIKLPKIFK------RRTTS---------NPFSKLFALA------------ 60
           MR  +GF+L+ KL KI K      RRT           NP +K   LA            
Sbjct: 1   MRKARGFKLRGKLVKICKWVIARPRRTRKSSNFSNRKRNPITKFLNLARFLRRGVKQLTM 60

Query: 61  -TASFSRP-DAYSRLNR---VRNGP-EAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPM 120
              SFS P   Y  L+    V   P     PKG+LAV+VG ++DE +R+LVP+IYFNHP+
Sbjct: 61  CNISFSSPKSGYVPLDHEDPVDQKPGRDGIPKGHLAVYVGESQDETQRYLVPVIYFNHPL 120

Query: 121 FGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVTNCIATAEYGCRKRR 135
           FG+LL+ AE++YGF +PGRI IP   SEFE+V   IA+ E  C++RR
Sbjct: 121 FGELLKEAEKVYGFNHPGRITIPCGASEFEKVQMRIASGEEYCQRRR 167

The following BLAST results are available for this feature:

BLAST of Carg25264 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923260.1	8.7e-76	97.93	auxin-responsive protein SAUR32-like [Cucurbita moschata]	[more]
XP_023552967.1	3.7e-74	96.55	auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]	[more]
XP_008448892.1	5.7e-51	74.83	PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo]	[more]
XP_004147976.1	4.1e-49	72.37	PREDICTED: uncharacterized protein LOC101210462 [Cucumis sativus] >KGN55902.1 hy...	[more]
XP_023005960.1	2.8e-42	66.90	auxin-induced protein 15A-like [Cucurbita maxima]	[more]

BLAST of Carg25264 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22620.1	2.0e-21	38.85	SAUR-like auxin-responsive protein family	[more]
AT4G12410.1	1.1e-19	37.01	SAUR-like auxin-responsive protein family	[more]
AT2G45210.1	8.0e-15	43.18	SAUR-like auxin-responsive protein family	[more]
AT3G60690.1	8.9e-14	40.96	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	1.2e-13	50.00	SAUR-like auxin-responsive protein family	[more]

BLAST of Carg25264 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22150\|SAU36_ARATH	1.4e-13	43.18	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]
sp\|Q9ZUZ3\|SAU32_ARATH	7.9e-12	45.33	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
sp\|P33081\|AX15A_SOYBN	4.8e-09	40.74	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|Q9FK62\|SAU24_ARATH	6.3e-09	45.07	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
sp\|Q9FJG0\|SAU20_ARATH	8.2e-09	45.59	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 S...	[more]

BLAST of Carg25264 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BLN7\|A0A1S3BLN7_CUCME	3.8e-51	74.83	auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=4 SV=...	[more]
tr\|A0A0A0L5M2\|A0A0A0L5M2_CUCSA	2.7e-49	72.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=4 SV=1	[more]
tr\|A0A2P6P831\|A0A2P6P831_ROSCH	4.8e-22	41.32	Putative small auxin-up RNA OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0202161 ...	[more]
tr\|M5W8K9\|M5W8K9_PRUPE	8.2e-22	42.59	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G076200 PE=4 SV=1	[more]
tr\|W9RGH3\|W9RGH3_9ROSA	6.9e-21	43.11	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_019007 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25264-RA	Carg25264-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 51..122 e-value: 1.6E-17 score: 63.3
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 45..131
None	No IPR available	PANTHER	PTHR31374:SF42	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 45..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25264	Cla005678	Watermelon (97103) v1	carwmB0862
Carg25264	Csa3G035310	Cucumber (Chinese Long) v2	carcuB0878
Carg25264	MELO3C013972	Melon (DHL92) v3.5.1	carmeB0852
Carg25264	ClCG10G003020	Watermelon (Charleston Gray)	carwcgB0836
Carg25264	CSPI03G03030	Wild cucumber (PI 183967)	carcpiB0898
Carg25264	Cucsa.320580	Cucumber (Gy14) v1	carcgyB0984
Carg25264	CmoCh16G011020	Cucurbita moschata (Rifu)	carcmoB1164
Carg25264	Lsi07G013330	Bottle gourd (USVL1VR-Ls)	carlsiB784
Carg25264	Cp4.1LG14g08740	Cucurbita pepo (Zucchini)	carcpeB1204
Carg25264	CsGy3G002960	Cucumber (Gy14) v2	carcgybB0852
Carg25264	MELO3C013972.2	Melon (DHL92) v3.6.1	carmedB0863
Carg25264	CsaV3_3G003060	Cucumber (Chinese Long) v3	carcucB0902
Carg25264	Cla97C10G187550	Watermelon (97103) v2	carwmbB0900
Carg25264	BhiUN285G18	Wax gourd	carwgoB1006

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None