MELO3C013972 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013972
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	SAUR-like auxin-responsive protein family
Location	chr6 : 33126555 .. 33127016 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGAAGAACAAAAGGCTTCAAATTGAAAATCAAGCTTCTCAAGATCTTCAAATGGAGAACCCATTTCTTCAATCTTCATACTTATTCCAATCCCTTCTCCAAGCTCTTTTCTCTTGCAACCGCGCCGTTTTCTCGCCGGGTCGGGTACGCCCGCCTAAACCGGGTGCGGTCTACGCCGGCAGTGGCGACGCCAAAAGGGTATTTGGCTGTCCACGTCGGCGGACCGGAGGATGAGACGGAGAGACATCTTGTGCCGGTGATTTACTTCAATCATCCCATGTTCCGGAAATTGCTGCAGGCGGCGGAGGTGATTTATGGGTTTGATTATCCCGGTCGGATCGTTATTCCGGTTGATGTTTCGGAGTTTGAGGAGGTTAAAAATGGTATTGCGGCCGCGGAGAACGGCCGCTACTGTCGGCGTAGCGGTGGATACCGACGCCGGCGTTGTGGAAAGTAG

mRNA sequence

ATGAGAAGAAGAACAAAAGGCTTCAAATTGAAAATCAAGCTTCTCAAGATCTTCAAATGGAGAACCCATTTCTTCAATCTTCATACTTATTCCAATCCCTTCTCCAAGCTCTTTTCTCTTGCAACCGCGCCGTTTTCTCGCCGGGTCGGGTACGCCCGCCTAAACCGGGTGCGGTCTACGCCGGCAGTGGCGACGCCAAAAGGGTATTTGGCTGTCCACGTCGGCGGACCGGAGGATGAGACGGAGAGACATCTTGTGCCGGTGATTTACTTCAATCATCCCATGTTCCGGAAATTGCTGCAGGCGGCGGAGGTGATTTATGGGTTTGATTATCCCGGTCGGATCGTTATTCCGGTTGATGTTTCGGAGTTTGAGGAGGTTAAAAATGGTATTGCGGCCGCGGAGAACGGCCGCTACTGTCGGCGTAGCGGTGGATACCGACGCCGGCGTTGTGGAAAGTAG

Coding sequence (CDS)

ATGAGAAGAAGAACAAAAGGCTTCAAATTGAAAATCAAGCTTCTCAAGATCTTCAAATGGAGAACCCATTTCTTCAATCTTCATACTTATTCCAATCCCTTCTCCAAGCTCTTTTCTCTTGCAACCGCGCCGTTTTCTCGCCGGGTCGGGTACGCCCGCCTAAACCGGGTGCGGTCTACGCCGGCAGTGGCGACGCCAAAAGGGTATTTGGCTGTCCACGTCGGCGGACCGGAGGATGAGACGGAGAGACATCTTGTGCCGGTGATTTACTTCAATCATCCCATGTTCCGGAAATTGCTGCAGGCGGCGGAGGTGATTTATGGGTTTGATTATCCCGGTCGGATCGTTATTCCGGTTGATGTTTCGGAGTTTGAGGAGGTTAAAAATGGTATTGCGGCCGCGGAGAACGGCCGCTACTGTCGGCGTAGCGGTGGATACCGACGCCGGCGTTGTGGAAAGTAG

Protein sequence

MRRRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVSEFEEVKNGIAAAENGRYCRRSGGYRRRRCGK*

Homology

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BLAST of MELO3C013972 vs. Swiss-Prot
Match: SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14
Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 1


Query: 46  SRRVGYARLNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEV 105
           +RR  Y  ++  ++ P    P+G+LA++VG  + +  R LVP++YFNHP+F +LL+ AE 
Sbjct: 63  TRRSAYIPVDHKKADPV---PRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEK 122

Query: 106 IYGFDYPGRIVIPVDVSEFEEVKNGIAAAEN------GRYCR 142
            YGF + G I IP   S+FE VK  IA+  +      GR+CR
Sbjct: 123 EYGFCHEGGITIPCLYSDFERVKTRIASGSSSRVFPWGRHCR 161

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BLAST of MELO3C013972 vs. Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-13
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 1


Query: 53  RLNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYP 112
           +L+R +S      PKG LA+ VG   +E +R +VPV+YFNHP+F +LL+ AE  YGFD  
Sbjct: 12  QLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQK 71

Query: 113 GRIVIPVDVSEFEEVK---NGIAAAENG-RYCRRSGG 146
           G I IP  V EF  V+   +G  +  NG  +  R GG
Sbjct: 72  GTITIPCHVEEFRYVQALIDGERSVYNGNNHHHRHGG 108

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BLAST of MELO3C013972 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 1


Query: 59  STPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYP-GRIVI 118
           +T A A PKG+LAV+VG  E + +R+LVP+ Y N P F+ LL  +E  +GFD+P G + I
Sbjct: 18  TTAASAAPKGFLAVYVG--ESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTI 77

Query: 119 PVDVSEFEEV 128
           P     F  V
Sbjct: 78  PCPEDTFINV 85

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BLAST of MELO3C013972 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-08
Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 1


Query: 58  RSTPAV-ATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYP-GRI 117
           RST AV A PKG+LAV+VG  E + +R+LVP+ Y N P F+ LL  +E  +GFD+P G +
Sbjct: 16  RSTAAVSAAPKGFLAVYVG--ESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGL 75

Query: 118 VIPVDVSEFEEV 128
            IP     F  V
Sbjct: 76  TIPCHEDTFINV 85

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BLAST of MELO3C013972 vs. Swiss-Prot
Match: SAU15_ARATH (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.6e-08
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 1


Query: 64  ATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYP-GRIVIPVDVS 123
           +TP+G++AV+VG  + + +R++VPV Y N P+F++LL  +E  +G+D+P G + IP   S
Sbjct: 20  STPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLTIPCHES 79

Query: 124 EFEEVKNGI 132
            F  V + I
Sbjct: 80  LFFTVTSQI 88

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BLAST of MELO3C013972 vs. TrEMBL
Match: A0A0A0L5M2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G035310 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.0e-72
Identity = 137/153 (89.54%), Postives = 140/153 (91.50%), Query Frame = 1


Query: 1   MRRRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRST 60
           M R TKGFKLK+KLLK+FKWRT FFNLHTYSNPFSKLFSLAT PFSR V YARLNRVRST
Sbjct: 1   MTRTTKGFKLKLKLLKVFKWRTPFFNLHTYSNPFSKLFSLATDPFSRPVRYARLNRVRST 60

Query: 61  PAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVD 120
           P VATPKGYLAVHVGGPE+E ERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVD
Sbjct: 61  PPVATPKGYLAVHVGGPENERERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVD 120

Query: 121 VSEFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 154
           VSEFEEVKNGIAA ENGR C R GGYRR RCGK
Sbjct: 121 VSEFEEVKNGIAATENGRCCPRRGGYRRWRCGK 153

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BLAST of MELO3C013972 vs. TrEMBL
Match: R0F2T4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005919mg PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.6e-24
Identity = 69/153 (45.10%), Postives = 91/153 (59.48%), Query Frame = 1


Query: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYS--------NPFSKLFSLATAPFSR------- 62
           RR +GFK+  + +KIFKW      + T          NP +K++SLA     R       
Sbjct: 2   RRLRGFKIGHRFVKIFKWIIRSRRIQTGKRQCLTGILNPVTKMYSLARRCLRRGANRLCG 61

Query: 63  --RVGYARLNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEV 122
             + G  RL     TPAV  PKG+L VHVG   D+T R +VPVIYFNHP+F +LL+ AE 
Sbjct: 62  GTKPGQTRLGEEPKTPAV--PKGHLVVHVGESGDDTRRVVVPVIYFNHPLFGELLEQAER 121

Query: 123 IYGFDYPGRIVIPVDVSEFEEVKNGIAAAENGR 139
           +YGFD PGRI+IP  VS+FE+V+  IAA ++ R
Sbjct: 122 VYGFDQPGRIMIPCRVSDFEKVQMRIAAWDHSR 152

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BLAST of MELO3C013972 vs. TrEMBL
Match: M5W8K9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025324mg PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23
Identity = 76/171 (44.44%), Postives = 102/171 (59.65%), Query Frame = 1


Query: 3   RRTKGFKLKIKLLKIFKW---------RTHFFNLHTYS-NPFSKLFSLATAPFSRR---- 62
           R+ +GF+L+ KL++IFKW         R       T + NP SK F+LA   F RR    
Sbjct: 2   RKNRGFRLRHKLVRIFKWIIRPRKDPNRCQRLEPPTQNYNPISKFFTLAR--FLRRGAKQ 61

Query: 63  -----VGYARLNRV----RSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKL 122
                 GY R+       +    V+ PKG+LAV+VG   D+T+R+LVPV+YFNHP+F  L
Sbjct: 62  LCSANSGYIRIREAPVETKVAKPVSVPKGHLAVYVGESGDDTQRYLVPVMYFNHPLFGDL 121

Query: 123 LQAAEVIYGFDYPGRIVIPVDVSEFEEVKNGIAAAENGRYCRRSGGYRRRR 151
           L+ AE +YGF++PGRIVIP +VSEFE+V+  IAA   G  C R    RRR+
Sbjct: 122 LKEAEKVYGFNHPGRIVIPCEVSEFEKVQMKIAA---GDQCPR----RRRK 163

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BLAST of MELO3C013972 vs. TrEMBL
Match: M4DWE7_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.7e-22
Identity = 67/161 (41.61%), Postives = 92/161 (57.14%), Query Frame = 1


Query: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYS--------NPFSKLFSLA--------TAPFS 62
           +R +GFK+  +L+KIFKW      + T          NP  K++SLA        T    
Sbjct: 2   KRLRGFKIGHRLVKIFKWIIRTRRIQTGKRQCLTGLLNPVPKIYSLARCLRRGANTLCGG 61

Query: 63  RRVGYARLNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVI 122
           ++ G  RL       AV  PKG+L VHVG   D+T R +VPV+YFNHP+F +LL+  E +
Sbjct: 62  KKTGQTRLGNEPKPQAV--PKGHLVVHVGECGDDTRRVVVPVVYFNHPLFGELLEEKERV 121

Query: 123 YGFDYPGRIVIPVDVSEFEEVKNGIAAAENGRYCRRSGGYR 148
           YGFD PGRI IP  VS+FE+V+  IAA +   +CRR   ++
Sbjct: 122 YGFDQPGRITIPCRVSDFEKVQMRIAAWD---HCRRKRAFK 157

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BLAST of MELO3C013972 vs. TrEMBL
Match: A0A078CJY0_BRANA (BnaA08g10360D protein OS=Brassica napus GN=BnaA08g10360D PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.7e-22
Identity = 67/161 (41.61%), Postives = 92/161 (57.14%), Query Frame = 1


Query: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYS--------NPFSKLFSLA--------TAPFS 62
           +R +GFK+  +L+KIFKW      + T          NP  K++SLA        T    
Sbjct: 2   KRLRGFKIGHRLVKIFKWIIRTRRIQTGKRQCLTGLLNPVPKIYSLARCLRRGANTLCGG 61

Query: 63  RRVGYARLNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVI 122
           ++ G  RL       AV  PKG+L VHVG   D+T R +VPV+YFNHP+F +LL+  E +
Sbjct: 62  KKTGQTRLGNEPKPQAV--PKGHLVVHVGECGDDTRRVVVPVVYFNHPLFGELLEEKERV 121

Query: 123 YGFDYPGRIVIPVDVSEFEEVKNGIAAAENGRYCRRSGGYR 148
           YGFD PGRI IP  VS+FE+V+  IAA +   +CRR   ++
Sbjct: 122 YGFDQPGRITIPCRVSDFEKVQMRIAAWD---HCRRKRAFK 157

[Close]

BLAST of MELO3C013972 vs. TAIR10
Match: AT4G22620.1 (AT4G22620.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 5.3e-25
Identity = 66/162 (40.74%), Postives = 91/162 (56.17%), Query Frame = 1


Query: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYS--------NPFSKLFSLATAPFSR------- 62
           +R +GFK+  + +KIFKW        T          NP +K++SLA     R       
Sbjct: 2   KRLRGFKIGHRFVKIFKWIIRSRRNQTGKRQCLTGILNPVTKIYSLARRCLRRGANRLCG 61

Query: 63  --RVGYARLNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEV 122
             + G  RL     TP V  P+G+L VHVG   ++T R +VPVIYFNHP+F +LL+ AE 
Sbjct: 62  GMKPGQTRLGNEPKTPTV--PRGHLVVHVGESGEDTRRVVVPVIYFNHPLFGELLEQAER 121

Query: 123 IYGFDYPGRIVIPVDVSEFEEVKNGIAAAENGRYCRRSGGYR 148
           +YGF+ PGRI+IP  VS+FE+V+  IAA +   +CRR   ++
Sbjct: 122 VYGFEQPGRIMIPCRVSDFEKVQMRIAAWD---HCRRKSTFK 158

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BLAST of MELO3C013972 vs. TAIR10
Match: AT4G12410.1 (AT4G12410.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-23
Identity = 64/157 (40.76%), Postives = 91/157 (57.96%), Query Frame = 1


Query: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLA---TAPFSRRVGYARLN---- 62
           +R +GFK+  + +KIFKW          +NP + + SLA   +    R  G ++ N    
Sbjct: 2   KRVRGFKIGHRFVKIFKWIPRNRCPTRITNPVTGIRSLARCLSRGAKRLCGGSKKNPGQN 61

Query: 63  --RVRSTPAVAT---PKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFD 122
             R+   P  +    P+G+L VHVG  +D+T R +VPVIYFNHP+F +LL+ AE ++GFD
Sbjct: 62  QIRLGKDPKKSNRVVPRGHLVVHVGESDDDTRRVVVPVIYFNHPLFGELLEQAERVHGFD 121

Query: 123 YPGRIVIPVDVSEFEEVKNGIAAAENGRYCRRSGGYR 148
            PGRI IP  VS+FE+V+  IAA +   +CRR   Y+
Sbjct: 122 QPGRITIPCRVSDFEKVQLRIAAWD---HCRRKNSYK 155

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BLAST of MELO3C013972 vs. TAIR10
Match: AT2G45210.1 (AT2G45210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 1


Query: 46  SRRVGYARLNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEV 105
           +RR  Y  ++  ++ P    P+G+LA++VG  + +  R LVP++YFNHP+F +LL+ AE 
Sbjct: 63  TRRSAYIPVDHKKADPV---PRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEK 122

Query: 106 IYGFDYPGRIVIPVDVSEFEEVKNGIAAAEN------GRYCR 142
            YGF + G I IP   S+FE VK  IA+  +      GR+CR
Sbjct: 123 EYGFCHEGGITIPCLYSDFERVKTRIASGSSSRVFPWGRHCR 161

[Close]

BLAST of MELO3C013972 vs. TAIR10
Match: AT2G46690.1 (AT2G46690.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 1


Query: 53  RLNRVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYP 112
           +L+R +S      PKG LA+ VG   +E +R +VPV+YFNHP+F +LL+ AE  YGFD  
Sbjct: 12  QLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQK 71

Query: 113 GRIVIPVDVSEFEEVK---NGIAAAENG-RYCRRSGG 146
           G I IP  V EF  V+   +G  +  NG  +  R GG
Sbjct: 72  GTITIPCHVEEFRYVQALIDGERSVYNGNNHHHRHGG 108

[Close]

BLAST of MELO3C013972 vs. TAIR10
Match: AT3G61900.1 (AT3G61900.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.9 bits (172), Expect = 8.0e-13
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 1


Query: 66  PKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDVSEFE 125
           PKG LA+ VG  E+E +R +VPV YFNHP+F +LL+ AE  YGF+  G I IP  V  F 
Sbjct: 31  PKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVFR 90

Query: 126 EVKNGI 132
            V++ I
Sbjct: 91  YVQDMI 96

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BLAST of MELO3C013972 vs. NCBI nr
Match: gi|659096037|ref|XP_008448892.1| (PREDICTED: uncharacterized protein LOC103490920 [Cucumis melo])

HSP 1 Score: 317.4 bits (812), Expect = 1.4e-83
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1


Query: 1   MRRRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRST 60
           MRRRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRST
Sbjct: 1   MRRRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRST 60

Query: 61  PAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVD 120
           PAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVD
Sbjct: 61  PAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVD 120

Query: 121 VSEFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 154
           VSEFEEVKNGIAAAENGRYCRRSGGYRRRRCGK
Sbjct: 121 VSEFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

[Close]

BLAST of MELO3C013972 vs. NCBI nr
Match: gi|449460485|ref|XP_004147976.1| (PREDICTED: uncharacterized protein LOC101210462 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72
Identity = 137/153 (89.54%), Postives = 140/153 (91.50%), Query Frame = 1


Query: 1   MRRRTKGFKLKIKLLKIFKWRTHFFNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRST 60
           M R TKGFKLK+KLLK+FKWRT FFNLHTYSNPFSKLFSLAT PFSR V YARLNRVRST
Sbjct: 1   MTRTTKGFKLKLKLLKVFKWRTPFFNLHTYSNPFSKLFSLATDPFSRPVRYARLNRVRST 60

Query: 61  PAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVD 120
           P VATPKGYLAVHVGGPE+E ERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVD
Sbjct: 61  PPVATPKGYLAVHVGGPENERERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVD 120

Query: 121 VSEFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 154
           VSEFEEVKNGIAA ENGR C R GGYRR RCGK
Sbjct: 121 VSEFEEVKNGIAATENGRCCPRRGGYRRWRCGK 153

[Close]

BLAST of MELO3C013972 vs. NCBI nr
Match: gi|470125353|ref|XP_004298667.1| (PREDICTED: uncharacterized protein LOC101292210 [Fragaria vesca subsp. vesca])

HSP 1 Score: 119.8 bits (299), Expect = 4.2e-24
Identity = 70/168 (41.67%), Postives = 104/168 (61.90%), Query Frame = 1


Query: 3   RRTKGFKLKI-KLLKIFKWRTH--------FFNLHTYS-----NPFSKLFSLATAP---- 62
           R+++GF+L++ KL+KIFKW  H        +  L + +     NP SK  +LA +     
Sbjct: 8   RKSRGFRLRVHKLVKIFKWIVHRPRREPVRYQRLQSTTSRSTYNPVSKFLTLARSLRRGA 67

Query: 63  ----FSRRVGYARLNRVRS-TPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKL 122
               F    GY R+ +       V  PKG++AV+VG  +D+T+R+LVPVIYFNHP+F +L
Sbjct: 68  KQLCFPNNSGYMRVGQSPDEAKPVVVPKGHMAVYVGESDDDTQRYLVPVIYFNHPLFGEL 127

Query: 123 LQAAEVIYGFDYPGRIVIPVDVSEFEEVKNGIAAAENGRYCRRSGGYR 148
           L+ AE +YGF++PGRIVIP + SEFE+V+  IAA ++ +  RR+   R
Sbjct: 128 LKEAEKVYGFNHPGRIVIPCEASEFEKVQMRIAAGDHCQRRRRTSTRR 175

[Close]

BLAST of MELO3C013972 vs. NCBI nr
Match: gi|694442275|ref|XP_009347833.1| (PREDICTED: uncharacterized protein LOC103939462 [Pyrus x bretschneideri])

HSP 1 Score: 119.4 bits (298), Expect = 5.5e-24
Identity = 72/168 (42.86%), Postives = 97/168 (57.74%), Query Frame = 1


Query: 3   RRTKGFKLKIKLLKIFKWRTHFFNLHTYS----------NPFSKLFSLATAP-------F 62
           RR +GF+LK KL++IFKW        T            NP SK F+LA +         
Sbjct: 2   RRNRGFRLKHKLVRIFKWMIRSRKDETQCQRLDPPAQTYNPISKFFTLARSLQRGAKELC 61

Query: 63  SRRVGYARLN----RVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQ 122
           S   GY R+       ++T  V  PKG++AV+VG  + +T R+LVPV+YFNHP+F +LL+
Sbjct: 62  SPNSGYIRIRGAPEETKATKPVGVPKGHMAVYVGESDADTHRYLVPVLYFNHPLFGELLK 121

Query: 123 AAEVIYGFDYPGRIVIPVDVSEFEEVKNGIAAAENGRYCRRSGGYRRR 150
            AE +YG+++PGRIVIP  VSEFE+V+  IAA   G  C R     RR
Sbjct: 122 EAEKVYGYNHPGRIVIPCGVSEFEKVQMKIAA---GDQCPRRRRKNRR 166

[Close]

BLAST of MELO3C013972 vs. NCBI nr
Match: gi|657956108|ref|XP_008369535.1| (PREDICTED: uncharacterized protein LOC103433088 [Malus domestica])

HSP 1 Score: 119.0 bits (297), Expect = 7.2e-24
Identity = 74/169 (43.79%), Postives = 100/169 (59.17%), Query Frame = 1


Query: 3   RRTKGFKLKIKLLKIFKW-------RTHFFNL----HTYSNPFSKLFSLATAP------- 62
           RR +GF+LK KL++IFKW        T F  L     TY NP SK F+LA +        
Sbjct: 2   RRNRGFRLKHKLVRIFKWMIRPRKDETRFQRLDPPARTY-NPISKFFTLARSLQRGAKEL 61

Query: 63  FSRRVGYARLN----RVRSTPAVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLL 122
            S   GY R+       ++T  V  PKG++A++V   + +T R+LVPV+YFNHP+F +LL
Sbjct: 62  CSPNSGYIRIRGAPEETKATKPVGVPKGHMALYVDESDADTHRYLVPVLYFNHPLFGELL 121

Query: 123 QAAEVIYGFDYPGRIVIPVDVSEFEEVKNGIAAAENGRYCRRSGGYRRR 150
           + AE +YG+++PGRIVIP  VSEFE+V+  IAA   G  C R     RR
Sbjct: 122 KEAEKVYGYNHPGRIVIPCGVSEFEKVQMKIAA---GDQCPRQRRKNRR 166

The following BLAST results are available for this feature:

BLAST of MELO3C013972 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU36_ARATH	1.8e-14	41.18	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1	[more]
SAU32_ARATH	2.0e-13	44.33	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1	[more]
SAU20_ARATH	3.3e-08	45.71	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	4.3e-08	48.61	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU15_ARATH	5.6e-08	40.58	Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1	[more]

BLAST of MELO3C013972 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5M2_CUCSA	1.0e-72	89.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G035310 PE=4 SV=1	[more]
R0F2T4_9BRAS	6.6e-24	45.10	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005919mg PE=4 SV=1	[more]
M5W8K9_PRUPE	1.1e-23	44.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025324mg PE=4 SV=1	[more]
M4DWE7_BRARP	4.7e-22	41.61	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A078CJY0_BRANA	4.7e-22	41.61	BnaA08g10360D protein OS=Brassica napus GN=BnaA08g10360D PE=4 SV=1	[more]

BLAST of MELO3C013972 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22620.1	5.3e-25	40.74	SAUR-like auxin-responsive protein family	[more]
AT4G12410.1	1.3e-23	40.76	SAUR-like auxin-responsive protein family	[more]
AT2G45210.1	1.0e-15	41.18	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	1.1e-14	44.33	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	8.0e-13	51.52	SAUR-like auxin-responsive protein family	[more]

BLAST of MELO3C013972 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096037\|ref\|XP_008448892.1\|	1.4e-83	100.00	PREDICTED: uncharacterized protein LOC103490920 [Cucumis melo]	[more]
gi\|449460485\|ref\|XP_004147976.1\|	1.4e-72	89.54	PREDICTED: uncharacterized protein LOC101210462 [Cucumis sativus]	[more]
gi\|470125353\|ref\|XP_004298667.1\|	4.2e-24	41.67	PREDICTED: uncharacterized protein LOC101292210 [Fragaria vesca subsp. vesca]	[more]
gi\|694442275\|ref\|XP_009347833.1\|	5.5e-24	42.86	PREDICTED: uncharacterized protein LOC103939462 [Pyrus x bretschneideri]	[more]
gi\|657956108\|ref\|XP_008369535.1\|	7.2e-24	43.79	PREDICTED: uncharacterized protein LOC103433088 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013972T1	MELO3C013972T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 59..127 score: 4.6
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 58..147 score: 2.2
None	No IPR available	PANTHER	PTHR31374:SF56	AUXIN-REGULATED PROTEIN-RELATED	coord: 58..147 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C013972	Csa3G035310	Cucumber (Chinese Long) v2	cumeB243
MELO3C013972	Cla005678	Watermelon (97103) v1	mewmB452
MELO3C013972	ClCG10G003020	Watermelon (Charleston Gray)	mewcgB415
MELO3C013972	Cla97C10G187550	Watermelon (97103) v2	mewmbB430
MELO3C013972	BhiUN285G18	Wax gourd	mewgoB528
MELO3C013972	CSPI03G03030	Wild cucumber (PI 183967)	cpimeB240
MELO3C013972	Cucsa.320580	Cucumber (Gy14) v1	cgymeB532
MELO3C013972	CmoCh16G011020	Cucurbita moschata (Rifu)	cmomeB283
MELO3C013972	Lsi07G013330	Bottle gourd (USVL1VR-Ls)	lsimeB446
MELO3C013972	Cp4.1LG14g08740	Cucurbita pepo (Zucchini)	cpemeB185
MELO3C013972	CsGy3G002960	Cucumber (Gy14) v2	cgybmeB209
MELO3C013972	Carg25264	Silver-seed gourd	carmeB0852
MELO3C013972	CsaV3_3G003060	Cucumber (Chinese Long) v3	cucmeB246

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C013972	Cucumber (Gy14) v1	cgymeB498
MELO3C013972	Cucurbita maxima (Rimu)	cmameB279
MELO3C013972	Cucurbita maxima (Rimu)	cmameB290
MELO3C013972	Cucurbita maxima (Rimu)	cmameB764
MELO3C013972	Cucurbita moschata (Rifu)	cmomeB270
MELO3C013972	Cucurbita moschata (Rifu)	cmomeB756
MELO3C013972	Wild cucumber (PI 183967)	cpimeB398
MELO3C013972	Cucumber (Chinese Long) v2	cumeB401
MELO3C013972	Watermelon (Charleston Gray)	mewcgB418
MELO3C013972	Watermelon (97103) v1	mewmB477
MELO3C013972	Cucurbita pepo (Zucchini)	cpemeB175
MELO3C013972	Cucurbita pepo (Zucchini)	cpemeB814
MELO3C013972	Bottle gourd (USVL1VR-Ls)	lsimeB030
MELO3C013972	Cucumber (Gy14) v2	cgybmeB348
MELO3C013972	Silver-seed gourd	carmeB0856
MELO3C013972	Cucumber (Chinese Long) v3	cucmeB410
MELO3C013972	Watermelon (97103) v2	mewmbB419
MELO3C013972	Wax gourd	mewgoB515
MELO3C013972	Melon (DHL92) v3.5.1	memeB017