Carg25123 (gene) Silver-seed gourd

Overview
NameCarg25123
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionagamous-like MADS-box protein AGL80
LocationCucurbita_argyrosperma_scaffold_211 : 121282 .. 121929 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGAAAGAAGGTGAAGCTGACATACATAACAAATGATGCAGCAAGAAAAGCCACATTCAAGAAGAGGAAGAAGGGCTTAATGAAGAAGCTCACCGAGCTCACCACACTTTGCGGTATCGAGGCGTGCGCCATAATTTTCAGTCCCTTCAATTCTCAACCCGATCTCTGGCCCTCTGTCGTCGGGCTCGAGAGGGTTCTCGCTAAGTTCAAAAGTCTTTCGGAGATGGAGCAATGCAATAAGATGGTGAACCAAGAGACCTTCCTCCGTGACCGCATAGCTAAAGCGACTGACCAACTCAAGAAGTTGCAAAGGGAGAATCGTGAGAAGGAGATCACAAGACTCATGTTTGAAAGCCTCGTGGCTGGAGCGACTCCGCCACGAGATCTCAATATCATTGATTTGTATGATCTCGTTTGGTTTGTTGATGAGACAATGACTGATGTTTGTAAGAGGATTGAGTTGCTTACGACAACTATGACCGAACCGCCGGTTGGGTCGGCGGTCGAGCCGTCGTGGTTCATGGAGATGATGAGTCATGGAGCCTATGATGATCAAATGGGATTCAAGATTTGGGATGATGTGATTCAACTTCCAAATGATGATAACCATGGTGCATTTTGGTCAAACAATGGCTCTCCTTGA

mRNA sequence

ATGACAAGAAAGAAGGTGAAGCTGACATACATAACAAATGATGCAGCAAGAAAAGCCACATTCAAGAAGAGGAAGAAGGGCTTAATGAAGAAGCTCACCGAGCTCACCACACTTTGCGGTATCGAGGCGTGCGCCATAATTTTCAGTCCCTTCAATTCTCAACCCGATCTCTGGCCCTCTGTCGTCGGGCTCGAGAGGGTTCTCGCTAAGTTCAAAAGTCTTTCGGAGATGGAGCAATGCAATAAGATGGTGAACCAAGAGACCTTCCTCCGTGACCGCATAGCTAAAGCGACTGACCAACTCAAGAAGTTGCAAAGGGAGAATCGTGAGAAGGAGATCACAAGACTCATGTTTGAAAGCCTCGTGGCTGGAGCGACTCCGCCACGAGATCTCAATATCATTGATTTGTATGATCTCGTTTGGTTTGTTGATGAGACAATGACTGATGTTTGTAAGAGGATTGAGTTGCTTACGACAACTATGACCGAACCGCCGGTTGGGTCGGCGGTCGAGCCGTCGTGGTTCATGGAGATGATGAGTCATGGAGCCTATGATGATCAAATGGGATTCAAGATTTGGGATGATGTGATTCAACTTCCAAATGATGATAACCATGGTGCATTTTGGTCAAACAATGGCTCTCCTTGA

Coding sequence (CDS)

ATGACAAGAAAGAAGGTGAAGCTGACATACATAACAAATGATGCAGCAAGAAAAGCCACATTCAAGAAGAGGAAGAAGGGCTTAATGAAGAAGCTCACCGAGCTCACCACACTTTGCGGTATCGAGGCGTGCGCCATAATTTTCAGTCCCTTCAATTCTCAACCCGATCTCTGGCCCTCTGTCGTCGGGCTCGAGAGGGTTCTCGCTAAGTTCAAAAGTCTTTCGGAGATGGAGCAATGCAATAAGATGGTGAACCAAGAGACCTTCCTCCGTGACCGCATAGCTAAAGCGACTGACCAACTCAAGAAGTTGCAAAGGGAGAATCGTGAGAAGGAGATCACAAGACTCATGTTTGAAAGCCTCGTGGCTGGAGCGACTCCGCCACGAGATCTCAATATCATTGATTTGTATGATCTCGTTTGGTTTGTTGATGAGACAATGACTGATGTTTGTAAGAGGATTGAGTTGCTTACGACAACTATGACCGAACCGCCGGTTGGGTCGGCGGTCGAGCCGTCGTGGTTCATGGAGATGATGAGTCATGGAGCCTATGATGATCAAATGGGATTCAAGATTTGGGATGATGTGATTCAACTTCCAAATGATGATAACCATGGTGCATTTTGGTCAAACAATGGCTCTCCTTGA

Protein sequence

MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFESLVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMSHGAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNGSP
Homology
[Close]
BLAST of Carg25123 vs. NCBI nr
Match: XP_022927107.1 (agamous-like MADS-box protein AGL80 [Cucurbita moschata])

HSP 1 Score: 434.1 bits (1115), Expect = 2.8e-118
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
           VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180
           LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180

Query: 181 HGAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNGSP 216
           HGAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNGSP
Sbjct: 181 HGAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNGSP 215

[Close]
BLAST of Carg25123 vs. NCBI nr
Match: XP_023520234.1 (agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.9 bits (1099), Expect = 2.0e-116
Identity = 212/215 (98.60%), Postives = 213/215 (99.07%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
           +VGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES
Sbjct: 61  IVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180
           LVAGATPPRDLNIIDLYDLVW VDETMTDVCKRIELLTTTMTEPPV SAVEPSWFMEMMS
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPPVVSAVEPSWFMEMMS 180

Query: 181 HGAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNGSP 216
           HGAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNGSP
Sbjct: 181 HGAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNGSP 215

[Close]
BLAST of Carg25123 vs. NCBI nr
Match: XP_023001635.1 (agamous-like MADS-box protein AGL80 [Cucurbita maxima])

HSP 1 Score: 419.9 bits (1078), Expect = 5.4e-114
Identity = 210/215 (97.67%), Postives = 210/215 (97.67%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
           VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRE REKEITRLMFES
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180
           LVAGATPPRDLNIIDLYDLVW VDETMTDVCKRIELLTTTMTEP V SAVEPSWFMEMMS
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180

Query: 181 HGAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNGSP 216
           H AYDDQMGFKIWDDVIQLPNDDNHGAFWSNNGSP
Sbjct: 181 HEAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNGSP 215

[Close]
BLAST of Carg25123 vs. NCBI nr
Match: XP_004139619.1 (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65069.1 hypothetical protein Csa_1G191680 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 2.9e-83
Identity = 164/216 (75.93%), Postives = 182/216 (84.26%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRENREKEITR+MF+S
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180
           LVAGATPP DLN+IDL DL W VD+ M D+ KR+ELLT   +     +  EPSWFMEM++
Sbjct: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATN--EPSWFMEMVN 180

Query: 181 HGAYD-DQMGFKIWDDVIQLPN---DDNHGAFWSNN 213
            GA D D MGF I DDVIQLP+   DDNHG FWSNN
Sbjct: 181 QGANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNN 214

[Close]
BLAST of Carg25123 vs. NCBI nr
Match: XP_008458956.1 (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo])

HSP 1 Score: 313.9 bits (803), Expect = 4.2e-82
Identity = 163/216 (75.46%), Postives = 180/216 (83.33%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRENREKEITRLMF+S
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180
           LVAGATPP DLN+IDL DL W VD+ M D+ KR+E LT   +   V +  EPSWFMEM++
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATN-EPSWFMEMVN 180

Query: 181 HGAYD-DQMGFKIWDDVIQLPN---DDNHGAFWSNN 213
            G  D D MGF I DDVIQLP+    DNHG FWSNN
Sbjct: 181 QGGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNN 215

[Close]
BLAST of Carg25123 vs. TAIR10
Match: AT5G48670.1 (AGAMOUS-like 80)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-45
Identity = 92/170 (54.12%), Postives = 134/170 (78.82%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YI+ND++RKATFKKRKKGLMKK+ EL+TLCGI ACAII+SP+++ P++WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
             G++RV+++F++L EM+Q  KMV+QE FL+ RIAKAT+ L++ ++++RE E+T +MF+ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAV 171
           L+ G      LNI+DL DL + +++ + DV +RIE+L  + TE    S+V
Sbjct: 121 LI-GNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSV 169

[Close]
BLAST of Carg25123 vs. TAIR10
Match: AT1G65300.1 (AGAMOUS-like 38)

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-37
Identity = 83/179 (46.37%), Postives = 120/179 (67.04%), Query Frame = 0 

Query: 3   RKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVV 62
           ++K+KL+ I N  +RK TF KRKKG+ KKLTEL TLCG+EACA+++SPFNS P+ WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFESLV 122
           G+E V++KF  LS +++  KMV+QETF+  RIAK  +QL+KL+ EN   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCL- 121

Query: 123 AGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELL------TTTMTEPPVGSAVEPSWF 176
            G T   +L+  DL DL  ++D+ +  + +RIE+L      ++++  P V +A  P  F
Sbjct: 122 KGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLPIVANAAAPVGF 179

[Close]
BLAST of Carg25123 vs. TAIR10
Match: AT1G65330.1 (MADS-box transcription factor family protein)

HSP 1 Score: 148.3 bits (373), Expect = 5.5e-36
Identity = 81/172 (47.09%), Postives = 116/172 (67.44%), Query Frame = 0 

Query: 3   RKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVV 62
           R K+KL++I ND+ RK TF KRKKG++KK  EL TLCG++ACA+I SP+NS  + WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFESLV 122
           G+E V++KF   S +++  KMV+QETFLR RIAK T++L+KL+ ENR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCL- 121

Query: 123 AGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELL-----TTTMTEPPVGSA 170
            G      L+  DL DL  F+++ +  V +R+E+L     +++   PP+G A
Sbjct: 122 KGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESSSSVPPPIGVA 172

[Close]
BLAST of Carg25123 vs. TAIR10
Match: AT5G26630.1 (MADS-box transcription factor family protein)

HSP 1 Score: 147.9 bits (372), Expect = 7.2e-36
Identity = 84/194 (43.30%), Postives = 124/194 (63.92%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTR+KVK+T+I N+ ARK+TFKKRKKGL+KK  EL  LCG+   A++ SP+   P++WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
                +V++++K++S M++  KMVNQETFL+ RI KAT+  KKL++EN+E E+  +MF+ 
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEP---------PVGSAVE 180
           L +G T    +   +L D  + +++ + DV +RIE+L     EP         P  S+V 
Sbjct: 121 L-SGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKRN-NEPSSALVPVAAPTTSSVM 180

Query: 181 PSWFMEMMSHGAYD 186
           P   M   S G YD
Sbjct: 181 PVVEMGSSSVGFYD 192

[Close]
BLAST of Carg25123 vs. TAIR10
Match: AT3G05860.1 (MADS-box transcription factor family protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 67/150 (44.67%), Postives = 103/150 (68.67%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKK+ L+YITN++ RKATF KRKKGL+KK+ EL+ LCGIEACA+I+SPFNS P++WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
              ++ V+  F+ L+++EQ  KMV+ E F+R  I+K  +   K   +N E+ +   MF+ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDV 151
           L++G     +L   +  DL  ++D+ + ++
Sbjct: 121 LLSGKGEKLNLTDRNREDLCKYIDQYLKEL 149

[Close]
BLAST of Carg25123 vs. Swiss-Prot
Match: sp|Q9FJK3|AGL80_ARATH (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.1e-44
Identity = 92/170 (54.12%), Postives = 134/170 (78.82%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YI+ND++RKATFKKRKKGLMKK+ EL+TLCGI ACAII+SP+++ P++WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
             G++RV+++F++L EM+Q  KMV+QE FL+ RIAKAT+ L++ ++++RE E+T +MF+ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAV 171
           L+ G      LNI+DL DL + +++ + DV +RIE+L  + TE    S+V
Sbjct: 121 LI-GNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSV 169

[Close]
BLAST of Carg25123 vs. Swiss-Prot
Match: sp|Q7XJK8|PHE2_ARATH (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.8e-36
Identity = 83/179 (46.37%), Postives = 120/179 (67.04%), Query Frame = 0 

Query: 3   RKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVV 62
           ++K+KL+ I N  +RK TF KRKKG+ KKLTEL TLCG+EACA+++SPFNS P+ WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFESLV 122
           G+E V++KF  LS +++  KMV+QETF+  RIAK  +QL+KL+ EN   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCL- 121

Query: 123 AGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELL------TTTMTEPPVGSAVEPSWF 176
            G T   +L+  DL DL  ++D+ +  + +RIE+L      ++++  P V +A  P  F
Sbjct: 122 KGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLPIVANAAAPVGF 179

[Close]
BLAST of Carg25123 vs. Swiss-Prot
Match: sp|O80805|PHE1_ARATH (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.9e-35
Identity = 81/172 (47.09%), Postives = 116/172 (67.44%), Query Frame = 0 

Query: 3   RKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVV 62
           R K+KL++I ND+ RK TF KRKKG++KK  EL TLCG++ACA+I SP+NS  + WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFESLV 122
           G+E V++KF   S +++  KMV+QETFLR RIAK T++L+KL+ ENR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCL- 121

Query: 123 AGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELL-----TTTMTEPPVGSA 170
            G      L+  DL DL  F+++ +  V +R+E+L     +++   PP+G A
Sbjct: 122 KGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESSSSVPPPIGVA 172

[Close]
BLAST of Carg25123 vs. Swiss-Prot
Match: sp|Q7XJK5|AGL90_ARATH (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-27
Identity = 68/152 (44.74%), Postives = 97/152 (63.82%), Query Frame = 0 

Query: 4   KKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVVG 63
           KKVKL+ I N+ +RK +F KRK G+ KKL EL+TLCG++ACA+I+SPF   P+ WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  LERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFESLVA 123
            ++V +KF  +    +  KM++QET L +RI KA +QLK L  ENRE ++ R MF+  V 
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFD-CVE 121

Query: 124 GATPPRDLNIIDLYDLVWFVDETMTDVCKRIE 156
           G       +  DL DL+  ++  +  +  RIE
Sbjct: 122 GKMSQYRYDAKDLQDLLSCMNLYLDQLNGRIE 152

[Close]
BLAST of Carg25123 vs. Swiss-Prot
Match: sp|Q7XJK6|AGL36_ARATH (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.8e-27
Identity = 67/152 (44.08%), Postives = 97/152 (63.82%), Query Frame = 0 

Query: 4   KKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVVG 63
           KKVKL+ I N+ +RK +F KRK G+ KKL EL+TLCG++ACA+I+SPF   P+ WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  LERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFESLVA 123
            ++V ++F  +    +  KM++QET+L +RI KA +QLK L  ENRE ++ R MF+  V 
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFD-CVE 121

Query: 124 GATPPRDLNIIDLYDLVWFVDETMTDVCKRIE 156
           G       +  DL DL   ++  +  +  RIE
Sbjct: 122 GKMSQYHYDAKDLQDLQSCINLYLDQLNGRIE 152

[Close]
BLAST of Carg25123 vs. TrEMBL
Match: tr|A0A0A0LVU5|A0A0A0LVU5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191680 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.9e-83
Identity = 164/216 (75.93%), Postives = 182/216 (84.26%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRENREKEITR+MF+S
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180
           LVAGATPP DLN+IDL DL W VD+ M D+ KR+ELLT   +     +  EPSWFMEM++
Sbjct: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATN--EPSWFMEMVN 180

Query: 181 HGAYD-DQMGFKIWDDVIQLPN---DDNHGAFWSNN 213
            GA D D MGF I DDVIQLP+   DDNHG FWSNN
Sbjct: 181 QGANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNN 214

[Close]
BLAST of Carg25123 vs. TrEMBL
Match: tr|A0A1S3C968|A0A1S3C968_CUCME (agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103498216 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.8e-82
Identity = 163/216 (75.46%), Postives = 180/216 (83.33%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRENREKEITRLMF+S
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180
           LVAGATPP DLN+IDL DL W VD+ M D+ KR+E LT   +   V +  EPSWFMEM++
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATN-EPSWFMEMVN 180

Query: 181 HGAYD-DQMGFKIWDDVIQLPN---DDNHGAFWSNN 213
            G  D D MGF I DDVIQLP+    DNHG FWSNN
Sbjct: 181 QGGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWSNN 215

[Close]
BLAST of Carg25123 vs. TrEMBL
Match: tr|A0A1S3BPF2|A0A1S3BPF2_CUCME (agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103492094 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.4e-54
Identity = 127/230 (55.22%), Postives = 162/230 (70.43%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YI ND+ARKAT+KKRK+GLMKK++EL+TLCGIEACAIIFSP++SQP+LWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
            +G++RVL++FK + EMEQ  KMVNQETFLR RIAKA +QLKK++++NREKEITRLMF+S
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELL---------------TTTMTEPP 180
           L A A     LN++DL DL W +D+ + D+  RI+ L                   T+P 
Sbjct: 121 LTA-AKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSLPQXXXXXXXXXXXTTQPQ 180

Query: 181 VGSAVEPSWFMEMMSHGAYDDQMGFKIWDDVIQLPNDD---NH-GAFWSN 212
                  +W ME++S     DQMGF + DD++ LP  D   NH  A WSN
Sbjct: 181 TA-----AWLMELVSP---QDQMGF-VGDDML-LPFGDQTYNHNNAMWSN 219

[Close]
BLAST of Carg25123 vs. TrEMBL
Match: tr|A0A0A0LVS3|A0A0A0LVS3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560740 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53
Identity = 125/227 (55.07%), Postives = 159/227 (70.04%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YI ND+ARKAT+KKRK+GLMKK++EL+TLCGIEACAIIFSP++SQP+LWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
            +G++RVL++FK + EMEQ  KMVNQETFLR RIAKA +QLKK++++NREKEITRLMF+S
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAV---------- 180
           L A A     LN++DL DL W +D+ + D+  RI+ L                       
Sbjct: 121 LTA-AKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 --EPSWFMEMMSHGAYDDQMGFKIWDDVIQLPNDD---NH-GAFWSN 212
               +W ME++S     DQMGF + DD++ LP  D   NH  A WSN
Sbjct: 181 PQTAAWLMELVSP---QDQMGF-VGDDML-LPFGDQTYNHNNAMWSN 221

[Close]
BLAST of Carg25123 vs. TrEMBL
Match: tr|D7UAA8|D7UAA8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0060g00300 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.3e-52
Identity = 118/242 (48.76%), Postives = 162/242 (66.94%), Query Frame = 0 

Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YITND+ARKATFKKRKKGLMKK++EL+TLCGI+ACAI++SP++SQP++WPS
Sbjct: 1   MTRKKVKLAYITNDSARKATFKKRKKGLMKKVSELSTLCGIDACAILYSPYDSQPEVWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120
            +G++RVLA FK + EMEQ  KMVNQE+FLR RIAK  +QLKK +++NREKEIT++M++S
Sbjct: 61  PLGVQRVLAHFKKMPEMEQSKKMVNQESFLRQRIAKGNEQLKKQRKDNREKEITQVMYQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLT---------------------- 180
           L       ++LNI+DL DL W +D+ + D+ KRIE L                       
Sbjct: 121 LTGKGL--QNLNIVDLNDLGWMIDQNLKDIHKRIESLNKEAQXXXXXXXXXXXXQLIKTG 180

Query: 181 -TTMTEPPVGSAVE----PSWFMEMMSHGAYDDQMGFKIWDDVIQLPNDDNHGAFWSNNG 216
                E P   +++      WF+++++    ++QMGF   DD++    D+NH A W N  
Sbjct: 181 GKAQEEKPAFDSMDAIQRQQWFVDLVNP---NEQMGF-AGDDMMLPFGDNNHNALWPNGF 236

The following BLAST results are available for this feature:
BLAST of Carg25123 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022927107.12.8e-118100.00agamous-like MADS-box protein AGL80 [Cucurbita moschata][more]
XP_023520234.12.0e-11698.60agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo][more]
XP_023001635.15.4e-11497.67agamous-like MADS-box protein AGL80 [Cucurbita maxima][more]
XP_004139619.12.9e-8375.93PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65069.1 hyp... [more]
XP_008458956.14.2e-8275.46PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo][more]
BLAST of Carg25123 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G48670.11.7e-4554.12AGAMOUS-like 80[more]
AT1G65300.13.8e-3746.37AGAMOUS-like 38[more]
AT1G65330.15.5e-3647.09MADS-box transcription factor family protein[more]
AT5G26630.17.2e-3643.30MADS-box transcription factor family protein[more]
AT3G05860.11.2e-3044.67MADS-box transcription factor family protein[more]
BLAST of Carg25123 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FJK3|AGL80_ARATH3.1e-4454.12Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=... [more]
sp|Q7XJK8|PHE2_ARATH6.8e-3646.37MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 P... [more]
sp|O80805|PHE1_ARATH9.9e-3547.09MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 P... [more]
sp|Q7XJK5|AGL90_ARATH2.6e-2744.74Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=... [more]
sp|Q7XJK6|AGL36_ARATH5.8e-2744.08Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=... [more]
BLAST of Carg25123 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LVU5|A0A0A0LVU5_CUCSA1.9e-8375.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191680 PE=4 SV=1[more]
tr|A0A1S3C968|A0A1S3C968_CUCME2.8e-8275.46agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103498216 PE=4... [more]
tr|A0A1S3BPF2|A0A1S3BPF2_CUCME5.4e-5455.22agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103492094 PE=4... [more]
tr|A0A0A0LVS3|A0A0A0LVS3_CUCSA2.1e-5355.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560740 PE=4 SV=1[more]
tr|D7UAA8|D7UAA8_VITVI2.3e-5248.76Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0060g00300 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000987core promoter proximal region sequence-specific DNA binding
GO:0000982transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0045944positive regulation of transcription from RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR033897MADS_SRF-like
IPR036879TF_MADSbox_sf
IPR002100TF_MADSbox
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000987 core promoter proximal region sequence-specific DNA binding
molecular_function GO:0000982 transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25123-RACarg25123-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..114
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 1..160
NoneNo IPR availablePANTHERPTHR11945:SF355AGAMOUS-LIKE MADS-BOX PROTEIN AGL36-RELATEDcoord: 1..160
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 3..23
score: 39.73
coord: 38..59
score: 27.22
coord: 23..38
score: 57.74
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 4.3E-24
score: 96.0
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 11..50
e-value: 2.4E-17
score: 62.1
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..49
score: 17.395
IPR036879Transcription factor, MADS-box superfamilyGENE3DG3DSA:3.40.1810.10coord: 13..95
e-value: 1.4E-13
score: 52.6
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILYSSF55455SRF-likecoord: 2..95
IPR033897MADS SRF-likeCDDcd00266MADS_SRF_likecoord: 2..85
e-value: 6.47192E-19
score: 77.3003