Carg25030 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25030
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Heavy metal-associated domain containing protein
Location	Cucurbita_argyrosperma_scaffold_176 : 251932 .. 253503 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATATCTGTTGATCAATACTTCTCTCTCTGCTCCATTCTTGAGCTGCTAATGGCAAAACCAGAAGCTAAAGACTTCGAAGCGACCTCAGAACCCTTCAACTCTAAGGTAAAATGTTCTTGAATTGTTCTTCATTTTCAAATCTTTCTTATTTTCTGCTAAAATTTTGCAGACATGTTTGTTGCGAGTCTCCATTCACTGTGAAGGTTGCAAGAGGAAAGTGATCAAGATTCTCCATAATATTCATGGTACTGTTCTTCATTTTTTCTTCATTTCTTTACATTTTGATCGCTTTGTTTTACTCAAATCCTAATTTCCTCTGTTTTTCCTTCACTTTCTTAGATTTTGATCGTTTATTTTGTTAAAAATTCAAAATTCCTCATCTGGGTATGCCTTATTTTCCCTCTAACATGAATTTCTTTCATCAAATTCTTCATTTCTTCACATTTCTTTCCCTTCCTCAAAATTTGTTCATTGTTTTCTCTTAAAAAATCGAAAATTTCCATTGTTGATCATCTGGGTGTTCTTCAATCTCCACAATTACAGGAGTTCACGGAGTAGAAATCGATCGAAAGCAGCAGAAAGTCACAGTAACAACGAATATAGACGAACAAACATTGATTAAAAGGTTAATCAAGGCAGGAAAGCACGCAGAACCATGGCCAGAAAGAATACCCATCTCAAAAAACATCAAAGAAAAGCAAATCGCTATGGAAATCCCTGTCTTTGTAACCAGCGCCGCCGTGCACGACGGCGGAATGCAGAAACAGAGCACGGAAACAGAGGCTCCGGCGAAAGAAGTGCCAGTCCCATCAAAAAATGAGGAGAACTGTGGAATTAGTGGAGCTGCCCAGATACTTGAAATTAGTAATGATGGAGACGGAGCTGCGGCGAAGATTGGCCGCGCCACCGTAGAACGAGTGGTGGAGTTTACGTCGGGAGGAGGTGGTGATAAGAATATCGCCGGTGAGACTCAACCTGGTGGGGCAGGTGGCAGTGCGGTAGCTGTCGAGGCAAGCAGCGGTGGCGGTGGAGAAGGGAGGAAGAAGAAGAGGAAAGGGCAGAAGAAAGAGAAGAGTGGCGGAGGAGGAGGAGGAGGCGGCGGCGCTGTTGTCGGAGATGTGGAGGGTCCACAGGTAGTTCCTCCACCTGGCAGCATAGGATCAGCCACTCCTCATGATCATCACCATCCTCATGATCCAACTCCATCATCCAATCACGCCCCTCCATTTAACCAACCATACTACCCGATCTCACCTCAACCGACCCACATGGCAAGTTATAACATGATCTCATCTCAACAGACTCACGTGGCAAGTTATAACACAATCTCATCCCAACCAACTCACATGACGAGTTACAATACAACGCACCCAACTACTACCTATGGTCCTTACTACGTCGAGCCACTGCCATATTCATATGTACATTCAGTTGCAGTAAGAAACACTTCACTACCATCACCACCATCACCACCACAACCACAACCATTGACAGAACTATCAAACTCTCCAACGTCTAATCCATTCGACTTCTTTAGCGATGAGAATCCCAGTGGTTGCACGGTCATGTGA

mRNA sequence

CATATCTGTTGATCAATACTTCTCTCTCTGCTCCATTCTTGAGCTGCTAATGGCAAAACCAGAAGCTAAAGACTTCGAAGCGACCTCAGAACCCTTCAACTCTAAGACATGTTTGTTGCGAGTCTCCATTCACTGTGAAGGTTGCAAGAGGAAAGTGATCAAGATTCTCCATAATATTCATGGAAAGCACGCAGAACCATGGCCAGAAAGAATACCCATCTCAAAAAACATCAAAGAAAAGCAAATCGCTATGGAAATCCCTGTCTTTGTAACCAGCGCCGCCGTGCACGACGGCGGAATGCAGAAACAGAGCACGGAAACAGAGGCTCCGGCGAAAGAAGTGCCAGTCCCATCAAAAAATGAGGAGAACTGTGGAATTAGTGGAGCTGCCCAGATACTTGAAATTAGTAATGATGGAGACGGAGCTGCGGCGAAGATTGGCCGCGCCACCGTAGAACGAGTGGTGGAGTTTACGTCGGGAGGAGGTGGTGATAAGAATATCGCCGGTGAGACTCAACCTGGTGGGGCAGGTGGCAGTGCGGTAGCTGTCGAGGCAAGCAGCGGTGGCGGTGGAGAAGGGAGGAAGAAGAAGAGGAAAGGGCAGAAGAAAGAGAAGAGTGGCGGAGGAGGAGGAGGAGGCGGCGGCGCTGTTGTCGGAGATGTGGAGGGTCCACAGGTAGTTCCTCCACCTGGCAGCATAGGATCAGCCACTCCTCATGATCATCACCATCCTCATGATCCAACTCCATCATCCAATCACGCCCCTCCATTTAACCAACCATACTACCCGATCTCACCTCAACCGACCCACATGGCAAGTTATAACATGATCTCATCTCAACAGACTCACGTGGCAAGTTATAACACAATCTCATCCCAACCAACTCACATGACGAGTTACAATACAACGCACCCAACTACTACCTATGGTCCTTACTACGTCGAGCCACTGCCATATTCATATGTACATTCAGTTGCAGTAAGAAACACTTCACTACCATCACCACCATCACCACCACAACCACAACCATTGACAGAACTATCAAACTCTCCAACGTCTAATCCATTCGACTTCTTTAGCGATGAGAATCCCAGTGGTTGCACGGTCATGTGA

Coding sequence (CDS)

ATGGCAAAACCAGAAGCTAAAGACTTCGAAGCGACCTCAGAACCCTTCAACTCTAAGACATGTTTGTTGCGAGTCTCCATTCACTGTGAAGGTTGCAAGAGGAAAGTGATCAAGATTCTCCATAATATTCATGGAAAGCACGCAGAACCATGGCCAGAAAGAATACCCATCTCAAAAAACATCAAAGAAAAGCAAATCGCTATGGAAATCCCTGTCTTTGTAACCAGCGCCGCCGTGCACGACGGCGGAATGCAGAAACAGAGCACGGAAACAGAGGCTCCGGCGAAAGAAGTGCCAGTCCCATCAAAAAATGAGGAGAACTGTGGAATTAGTGGAGCTGCCCAGATACTTGAAATTAGTAATGATGGAGACGGAGCTGCGGCGAAGATTGGCCGCGCCACCGTAGAACGAGTGGTGGAGTTTACGTCGGGAGGAGGTGGTGATAAGAATATCGCCGGTGAGACTCAACCTGGTGGGGCAGGTGGCAGTGCGGTAGCTGTCGAGGCAAGCAGCGGTGGCGGTGGAGAAGGGAGGAAGAAGAAGAGGAAAGGGCAGAAGAAAGAGAAGAGTGGCGGAGGAGGAGGAGGAGGCGGCGGCGCTGTTGTCGGAGATGTGGAGGGTCCACAGGTAGTTCCTCCACCTGGCAGCATAGGATCAGCCACTCCTCATGATCATCACCATCCTCATGATCCAACTCCATCATCCAATCACGCCCCTCCATTTAACCAACCATACTACCCGATCTCACCTCAACCGACCCACATGGCAAGTTATAACATGATCTCATCTCAACAGACTCACGTGGCAAGTTATAACACAATCTCATCCCAACCAACTCACATGACGAGTTACAATACAACGCACCCAACTACTACCTATGGTCCTTACTACGTCGAGCCACTGCCATATTCATATGTACATTCAGTTGCAGTAAGAAACACTTCACTACCATCACCACCATCACCACCACAACCACAACCATTGACAGAACTATCAAACTCTCCAACGTCTAATCCATTCGACTTCTTTAGCGATGAGAATCCCAGTGGTTGCACGGTCATGTGA

Protein sequence

MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIHGKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQSTETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTSGGGGDKNIAGETQPGGAGGSAVAVEASSGGGGEGRKKKRKGQKKEKSGGGGGGGGGAVVGDVEGPQVVPPPGSIGSATPHDHHHPHDPTPSSNHAPPFNQPYYPISPQPTHMASYNMISSQQTHVASYNTISSQPTHMTSYNTTHPTTTYGPYYVEPLPYSYVHSVAVRNTSLPSPPSPPQPQPLTELSNSPTSNPFDFFSDENPSGCTVM

Homology

[Close]

BLAST of Carg25030 vs. NCBI nr
Match: XP_022934018.1 (heavy metal-associated isoprenylated plant protein 36-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 324.7 bits (831), Expect = 3.9e-85
Identity = 315/390 (80.77%), Postives = 317/390 (81.28%), Query Frame = 0


Query: 1   MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVI---------------------KI 60
           MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVI                      +
Sbjct: 1   MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIXXXXXXXXXXXXXIDRKQQKVTV 60

Query: 61  LHNIH-----------GKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS 120
             NI            GKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS
Sbjct: 61  TTNIDEQTLIKRLIKAGKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS 120

Query: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTSXXXXX 180
           TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTS  XXX
Sbjct: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTS--XXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVECP 240

Query: 241 XXXXXXXSIGSATPHDXXXPHDPTPSSNHAPPFNQPYY----PISPQXXXXXXXXXXXXX 300
                  S+GSATP  XXX    TPSSNHAPPFNQPYY     IS Q     XXXXXXXX
Sbjct: 241 QVVPPPGSLGSATPXXXXXXXXXTPSSNHAPPFNQPYYHPVHTISSQPTHIAXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYSYVHSVAVRNTSLPXXXXXXX 355
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYSYVHSVAVRNTSLP  XXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYSYVHSVAVRNTSLP--XXXXX 360

[Close]

BLAST of Carg25030 vs. NCBI nr
Match: XP_022934017.1 (heavy metal-associated isoprenylated plant protein 36-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 315.5 bits (807), Expect = 2.4e-82
Identity = 320/403 (79.40%), Postives = 322/403 (79.90%), Query Frame = 0


Query: 1   MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVI---------------------KI 60
           MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVI                      +
Sbjct: 1   MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIXXXXXXXXXXXXXIDRKQQKVTV 60

Query: 61  LHNIH-----------GKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS 120
             NI            GKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS
Sbjct: 61  TTNIDEQTLIKRLIKAGKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS 120

Query: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTSXXXXX 180
           TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTS  XXX
Sbjct: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTS--XXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVECP 240

Query: 241 XXXXXXXSIGSATPHDXXXPHDPTPSSNHAPPFNQPYY----PISPQ------------- 300
                  S+GSATP  XXX    TPSSNHAPPFNQPYY     IS Q             
Sbjct: 241 QVVPPPGSLGSATPXXXXXXXXXTPSSNHAPPFNQPYYHPVHTISSQPTHIAXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYSYVHSVAV 355
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYSYVHSVAV
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYSYVHSVAV 360

[Close]

BLAST of Carg25030 vs. NCBI nr
Match: XP_022969697.1 (heavy metal-associated isoprenylated plant protein 36-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 276.9 bits (707), Expect = 9.3e-71
Identity = 290/390 (74.36%), Postives = 291/390 (74.62%), Query Frame = 0


Query: 1   MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIH---------------- 60
           MAKPEAKDFE TSEPFNSKTCLLRVSIHCEGCKRKVIKILHNI                 
Sbjct: 1   MAKPEAKDFEGTSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIXXXXAVEIDRNQQKVTV 60

Query: 61  ----------------GKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS 120
                           GKHAEPWPERIPISKNIKEKQ AMEIPV V SAAVHDGG QKQS
Sbjct: 61  TTNIDEQTLIKRLIKAGKHAEPWPERIPISKNIKEKQNAMEIPVSVNSAAVHDGGKQKQS 120

Query: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTSXXXXX 180
           TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTS     
Sbjct: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTS--GGS 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GDKNIAGETQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXSIGSATPHDXXXPHDPTPSSNHAPPFNQPY----YPISPQXXXXXXXXXXXXX 300
           XXXXXXX         XXX          APPFNQPY    + IS Q XXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPFNQPYNHSVHTISSQPXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYSYVHSVAVRNTSLPXXXXXXX 355
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VEPLPY    SV VRNTS P       
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPLPY----SVVVRNTSPP---SPPQ 360

[Close]

BLAST of Carg25030 vs. NCBI nr
Match: XP_022969689.1 (heavy metal-associated isoprenylated plant protein 36-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 276.9 bits (707), Expect = 9.3e-71
Identity = 290/390 (74.36%), Postives = 291/390 (74.62%), Query Frame = 0


Query: 1   MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIH---------------- 60
           MAKPEAKDFE TSEPFNSKTCLLRVSIHCEGCKRKVIKILHNI                 
Sbjct: 1   MAKPEAKDFEGTSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIXXXXAVEIDRNQQKVTV 60

Query: 61  ----------------GKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS 120
                           GKHAEPWPERIPISKNIKEKQ AMEIPV V SAAVHDGG QKQS
Sbjct: 61  TTNIDEQTLIKRLIKAGKHAEPWPERIPISKNIKEKQNAMEIPVSVNSAAVHDGGKQKQS 120

Query: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTSXXXXX 180
           TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTS     
Sbjct: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTS--GGS 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GDKNIAGETQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXSIGSATPHDXXXPHDPTPSSNHAPPFNQPY----YPISPQXXXXXXXXXXXXX 300
           XXXXXXX         XXX          APPFNQPY    + IS Q XXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPFNQPYNHSVHTISSQPXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYSYVHSVAVRNTSLPXXXXXXX 355
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VEPLPY    SV VRNTS P       
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPLPY----SVVVRNTSPP---SPPQ 360

[Close]

BLAST of Carg25030 vs. NCBI nr
Match: XP_022969682.1 (heavy metal-associated isoprenylated plant protein 36-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 267.7 bits (683), Expect = 5.6e-68
Identity = 291/403 (72.21%), Postives = 292/403 (72.46%), Query Frame = 0


Query: 1   MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIH---------------- 60
           MAKPEAKDFE TSEPFNSKTCLLRVSIHCEGCKRKVIKILHNI                 
Sbjct: 1   MAKPEAKDFEGTSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIXXXXAVEIDRNQQKVTV 60

Query: 61  ----------------GKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS 120
                           GKHAEPWPERIPISKNIKEKQ AMEIPV V SAAVHDGG QKQS
Sbjct: 61  TTNIDEQTLIKRLIKAGKHAEPWPERIPISKNIKEKQNAMEIPVSVNSAAVHDGGKQKQS 120

Query: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTSXXXXX 180
           TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTS     
Sbjct: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTS--GGS 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GDKNIAGETQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXSIGSATPHDXXXPHDPTPSSNHAPPFNQPY----YPISPQ------------- 300
           XXXXXXX         XXX          APPFNQPY    + IS Q             
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPFNQPYNHSVHTISSQPXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYSYVHSVAV 355
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VEPLPY    SV V
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPLPY----SVVV 360

[Close]

BLAST of Carg25030 vs. TAIR10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 9.7e-06
Identity = 23/37 (62.16%), Postives = 25/37 (67.57%), Query Frame = 0


Query: 9  FEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIHG 46
          FE   EP    T +LRVSIHCEGCKRK+ KIL  I G
Sbjct: 20 FEDYPEPLRYTTWVLRVSIHCEGCKRKIKKILSKIDG 56

[Close]

BLAST of Carg25030 vs. TAIR10
Match: AT1G56210.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.2e-05
Identity = 21/31 (67.74%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 15 PFNSKTCLLRVSIHCEGCKRKVIKILHNIHG 46
          P   K+C L+VSIHCEGCKRKV KIL +I G
Sbjct: 36 PLPYKSCTLKVSIHCEGCKRKVKKILTSIEG 66

[Close]

BLAST of Carg25030 vs. TAIR10
Match: AT3G06130.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.1e-04
Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = 0


Query: 19 KTCLLRVSIHCEGCKRKVIKILHNIHG 46
          +TC+L+V+IHC+GCK+KV KIL  I G
Sbjct: 10 QTCVLKVNIHCDGCKQKVKKILQKIEG 36

[Close]

BLAST of Carg25030 vs. TAIR10
Match: AT5G19090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.1e-04
Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = 0


Query: 19 KTCLLRVSIHCEGCKRKVIKILHNIHG 46
          +TC+L+V+IHC+GCK+KV KIL  I G
Sbjct: 10 QTCVLKVNIHCDGCKQKVKKILQKIEG 36

[Close]

BLAST of Carg25030 vs. TAIR10
Match: AT3G05220.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 9.1e-04
Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 19 KTCLLRVSIHCEGCKRKVIKILHNIHGKH---AEPWPERIPISKNI 62
          +TC+L+V++HCEGCK KV K L  I G +   A+    R+ ++ NI
Sbjct: 10 QTCVLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGNI 55

[Close]

BLAST of Carg25030 vs. Swiss-Prot
Match: sp|Q84J88|HIP36_ARATH (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.8e-04
Identity = 23/37 (62.16%), Postives = 25/37 (67.57%), Query Frame = 0


Query: 9  FEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIHG 46
          FE   EP    T +LRVSIHCEGCKRK+ KIL  I G
Sbjct: 20 FEDYPEPLRYTTWVLRVSIHCEGCKRKIKKILSKIDG 56

[Close]

BLAST of Carg25030 vs. Swiss-Prot
Match: sp|Q9C7J6|HIP35_ARATH (Heavy metal-associated isoprenylated plant protein 35 OS=Arabidopsis thaliana OX=3702 GN=HIPP35 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.9e-04
Identity = 21/31 (67.74%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 15 PFNSKTCLLRVSIHCEGCKRKVIKILHNIHG 46
          P   K+C L+VSIHCEGCKRKV KIL +I G
Sbjct: 36 PLPYKSCTLKVSIHCEGCKRKVKKILTSIEG 66

[Close]

BLAST of Carg25030 vs. TrEMBL
Match: tr|A0A0A0LZ09|A0A0A0LZ09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569440 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.6e-37
Identity = 164/404 (40.59%), Postives = 190/404 (47.03%), Query Frame = 0


Query: 1   MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIH---------------- 60
           MAK EAK+FE T EPF  K C+LRVSIHCEGCKRKV+KILHNI+                
Sbjct: 1   MAKVEAKEFEGTLEPFKCKICVLRVSIHCEGCKRKVVKILHNINGVHSVEIDRKQQKVTI 60

Query: 61  ----------------GKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS 120
                           G HAEPWPE  PISK IKEKQI +EIP   TSA+V DGG +KQ+
Sbjct: 61  TTNIDEQSLIKRLIKAGMHAEPWPETKPISKIIKEKQIPVEIPPGETSASVRDGGKKKQT 120

Query: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEISNDGDGAAAKIGRATVERVVEFTSXXXXX 180
           TETE PA+E+ VP +NEE    SG  + +   +DG G A + G   VERVVE        
Sbjct: 121 TETEPPAEELQVPPRNEEK---SGTNENVRRCDDGHGDATETG-GPVERVVE-------- 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                                    XXXXXXXXXXXXXXXXXXXXXXXXXX         
Sbjct: 181 -SPPNISSETQPGMPSGAVDIEASCXXXXXXXXXXXXXXXXXXXXXXXXXXAVAGEMVSP 240

Query: 241 XXXXXXXSIGSATPHDXXXPHDPTPSSNHAPPFNQPYYPISPQXXXXXXXXXXXXXXXXX 300
                  +IGS T      P +  PSSNH+PPFN P +    Q                 
Sbjct: 241 QTVPTPTNIGSPT------PPNQIPSSNHSPPFNHPLHTTLSQ----------------- 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYS--YVHSVA-VRNTSLP-------- 355
                                      YY  P  YS  YVHS+A   ++SLP        
Sbjct: 301 ---------PAYIASYNTAYPTNTHDAYYASPPSYSYAYVHSMAPTLSSSLPIMEQPXXX 359

[Close]

BLAST of Carg25030 vs. TrEMBL
Match: tr|A0A1S3BPP2|A0A1S3BPP2_CUCME (uncharacterized protein LOC103492164 OS=Cucumis melo OX=3656 GN=LOC103492164 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.9e-36
Identity = 179/413 (43.34%), Postives = 202/413 (48.91%), Query Frame = 0


Query: 1   MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIH---------------- 60
           MAK EAK+ E TSEPF  K C+LRVSIHCEGCKRKVIKILHNI+                
Sbjct: 1   MAKVEAKELEGTSEPFKCKICVLRVSIHCEGCKRKVIKILHNINGVHSVEIDRKQQKVTI 60

Query: 61  ----------------GKHAEPWPERIPISKNIKEKQIAMEIPVFVTSAAVHDGGMQKQS 120
                           GKHAEPWPE  PISK   EKQIA+EIP   TSA+V DGG QKQS
Sbjct: 61  TTNIDEQSLIKRLIKAGKHAEPWPETKPISK--IEKQIAVEIPAGETSASVRDGGKQKQS 120

Query: 121 TETEAPAKEVPVPSKNEENCGISGAAQILEIS--NDGDGAAAKIGRATVERVVEFTSXXX 180
           TETE  A+ + VP +NEE  G +   Q+L+IS  +DG G A +     VERVVE      
Sbjct: 121 TETEPSAEALQVPPRNEEKSGTNENVQVLQISKADDGHGDATET-NGRVERVVESPPDIA 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                         XXXXXXXXXXXXXXXXXXXXXXXXXXXX                  
Sbjct: 181 CETQPSMPSGAVDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAGEMVSPPTV------ 240

Query: 241 XXXXXXXXXSIGSATPHDXXXPHDP--TPSSNHAPPFNQPY-YPISPQXXXXXXXXXXXX 300
                         TP +   P+ P   PSSNH+PPFN PY +P+               
Sbjct: 241 -------------PTPANIGSPNPPNQVPSSNHSPPFNNPYNHPL--------------- 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYYVEPLPYS--YVHSVAVRN-----TSL 355
                                           YY  P  YS  YVHS+A RN     +SL
Sbjct: 301 --------HVAASQPAYVASYNTVYPTNTHDAYYASPPSYSYAYVHSMAPRNSTTLSSSL 360

[Close]

BLAST of Carg25030 vs. TrEMBL
Match: tr|A0A2I0J5K6|A0A2I0J5K6_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_028067 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07
Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 3  KPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIHGKHAE 50
          KPEAKD E + EP N KT +L+VSIHCE CK+KV KILH I G  AE
Sbjct: 8  KPEAKDTEESPEPLNQKTWVLKVSIHCEACKKKVNKILHKIEGGEAE 54

[Close]

BLAST of Carg25030 vs. TrEMBL
Match: tr|A0A218VQW8|A0A218VQW8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr020221 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-07
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 3  KPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIHGKHAEPW---PERIPISK 62
          KPEAKD E + EP N KT +L+VSIHCE CK+KV KILH I G +   +    +R+ ++ 
Sbjct: 8  KPEAKDTEESPEPLNQKTWVLKVSIHCEACKKKVNKILHKIEGVYRTDFDLKQQRVTVTG 67

Query: 63 NIKEKQI 67
          N++ + +
Sbjct: 68 NVEAETL 74

[Close]

BLAST of Carg25030 vs. TrEMBL
Match: tr|A0A2G5DLU3|A0A2G5DLU3_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01700211v1 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.3e-06
Identity = 31/64 (48.44%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 1  MAKPEAKDFEATSEPFNSKTCLLRVSIHCEGCKRKVIKILHNIH----------GKHAEP 55
          MA   +K  E  + P   +T +L+VSIHCEGCKRKV K+L NI           GKHAE 
Sbjct: 1  MASTPSKQVEEATGPLEYQTWVLKVSIHCEGCKRKVKKVLQNIEETLIKKLMKTGKHAEL 60

The following BLAST results are available for this feature:

BLAST of Carg25030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934018.1	3.9e-85	80.77	heavy metal-associated isoprenylated plant protein 36-like isoform X2 [Cucurbita...	[more]
XP_022934017.1	2.4e-82	79.40	heavy metal-associated isoprenylated plant protein 36-like isoform X1 [Cucurbita...	[more]
XP_022969697.1	9.3e-71	74.36	heavy metal-associated isoprenylated plant protein 36-like isoform X3 [Cucurbita...	[more]
XP_022969689.1	9.3e-71	74.36	heavy metal-associated isoprenylated plant protein 36-like isoform X2 [Cucurbita...	[more]
XP_022969682.1	5.6e-68	72.21	heavy metal-associated isoprenylated plant protein 36-like isoform X1 [Cucurbita...	[more]

BLAST of Carg25030 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27690.1	9.7e-06	62.16	Heavy metal transport/detoxification superfamily protein	[more]
AT1G56210.1	2.2e-05	67.74	Heavy metal transport/detoxification superfamily protein	[more]
AT3G06130.1	4.1e-04	62.96	Heavy metal transport/detoxification superfamily protein	[more]
AT5G19090.1	4.1e-04	62.96	Heavy metal transport/detoxification superfamily protein	[more]
AT3G05220.1	9.1e-04	43.48	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of Carg25030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84J88\|HIP36_ARATH	1.8e-04	62.16	Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9C7J6\|HIP35_ARATH	3.9e-04	67.74	Heavy metal-associated isoprenylated plant protein 35 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg25030 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LZ09\|A0A0A0LZ09_CUCSA	2.6e-37	40.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569440 PE=4 SV=1	[more]
tr\|A0A1S3BPP2\|A0A1S3BPP2_CUCME	2.9e-36	43.34	uncharacterized protein LOC103492164 OS=Cucumis melo OX=3656 GN=LOC103492164 PE=...	[more]
tr\|A0A2I0J5K6\|A0A2I0J5K6_PUNGR	1.3e-07	65.96	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_028067 PE=4 SV=1	[more]
tr\|A0A218VQW8\|A0A218VQW8_PUNGR	2.1e-07	46.27	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr020221 PE=4 SV=1	[more]
tr\|A0A2G5DLU3\|A0A2G5DLU3_AQUCA	5.3e-06	48.44	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01700211v1 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25030-RA	Carg25030-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..354
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..354
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 5..45
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 45..354
None	No IPR available	PANTHER	PTHR22814:SF180	HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEIN	coord: 45..354 coord: 5..45

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25030	Cla005223	Watermelon (97103) v1	carwmB0236
Carg25030	Csa1G569440	Cucumber (Chinese Long) v2	carcuB0273
Carg25030	MELO3C015311	Melon (DHL92) v3.5.1	carmeB0249
Carg25030	ClCG03G017100	Watermelon (Charleston Gray)	carwcgB0239
Carg25030	CSPI01G26500	Wild cucumber (PI 183967)	carcpiB0277
Carg25030	Cucsa.181950	Cucumber (Gy14) v1	carcgyB0290
Carg25030	CmaCh11G011360	Cucurbita maxima (Rimu)	carcmaB0342
Carg25030	CmoCh11G011780	Cucurbita moschata (Rifu)	carcmoB0346
Carg25030	Lsi06G001160	Bottle gourd (USVL1VR-Ls)	carlsiB221
Carg25030	Cp4.1LG04g00530	Cucurbita pepo (Zucchini)	carcpeB0347
Carg25030	CsGy1G025740	Cucumber (Gy14) v2	carcgybB0260
Carg25030	MELO3C015311.2	Melon (DHL92) v3.6.1	carmedB0258
Carg25030	Cla97C03G067440	Watermelon (97103) v2	carwmbB0253
Carg25030	Bhi02G001755	Wax gourd	carwgoB0315

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25030	Cucurbita maxima (Rimu)	carcmaB0341
Carg25030	Cucurbita moschata (Rifu)	carcmoB0345
Carg25030	Cucurbita pepo (Zucchini)	carcpeB0346
Carg25030	Cucumber (Chinese Long) v3	carcucB0276
Carg25030	Wax gourd	carwgoB0314