Carg24838 (gene) Silver-seed gourd

NameCarg24838
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionSerine/threonine-protein kinase MRCK gamma like
LocationCucurbita_argyrosperma_scaffold_157 : 451540 .. 452622 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAACTCACCACCACCACAAGTTCCCGGGATTCTACTACGGACGCCGGAGTGGAGAATGGACTCCTGCCGCTTCAGTCTTTGATACAGATTGTCAATTTTTGGTACTTTCAATTTCGCCTCTTTCTCGGAGTCGGATCAGAGCCTTCGTTCTCGTTCTGACCACTCTCTTCACACCGAGAGACTTGCAGGGCGGTTAGTTTCCCGATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAATATGTCTCGCCTGGAGATTCCGGAGGCTACGGCGGCGCCGGGCGTCGAGGAGATGAAATCTCTGGCTCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAGGTGCGTTGTTACCTTCAGCGGCAAAACTAGCTGCCGATTGGAAACCGTCGCTAGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGTTGAGGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAGAGGAAAAGCGGATCTCGAGACGGAGAGGCCAGAGGAGTTAACGGCCGTAGTAACAGTAACGATTTCAGGTACGTACGTTTGTGATTTCGTGAATCTTCCGTATCATTATCGAAACCGTAAAGATCTGTGAAATGAAAGCGACATCTGAAACGAATCTTTCTGTTATTTTCCCTCTCTCAGGCGAAGTCCGGCATCGATCCCAGTCGTGATCCCGGCATTTTCTCCGACTCCGTTCTTGTTCTGATGCGATTCCGCTTCTACTTTCTGATCAATCAGGCCCTTGTAATATATGTTATATGTATATATTTTGCATAATAAATTATAATTTAAAAGTATAAAGTTGAGGTTAAGGAAGAAAACTTCTCCATGAAATTGTAGCTTGTTTGGCTGTTCTCTTCAATGGGAACTCTCTGCAATTTAAATGTTCCCATTCTTACATGATGCTTTGATTTCTCTCCACACTGTTTTGGATTATTGTTAGAGAAAAGAATATTGATTCTGTTTATGGATCTTTACAGAATTGCGTTGGATGGAGAAGCATAATTTTGGTTGTTCAAGTTTTAGTTATATGGATGCTTTTGAATGT

mRNA sequence

GGAAACTCACCACCACCACAAGTTCCCGGGATTCTACTACGGACGCCGGAGTGGAGAATGGACTCCTGCCGCTTCAGTCTTTGATACAGATTGTCAATTTTTGGTACTTTCAATTTCGCCTCTTTCTCGGAGTCGGATCAGAGCCTTCGTTCTCGTTCTGACCACTCTCTTCACACCGAGAGACTTGCAGGGCGGTTAGTTTCCCGATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAATATGTCTCGCCTGGAGATTCCGGAGGCTACGGCGGCGCCGGGCGTCGAGGAGATGAAATCTCTGGCTCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAGGTGCGTTGTTACCTTCAGCGGCAAAACTAGCTGCCGATTGGAAACCGTCGCTAGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGTTGAGGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAGAGGAAAAGCGGATCTCGAGACGGAGAGGCCAGAGGAGTTAACGGCCGTAGTAACAGTAACGATTTCAGGCGAAGTCCGGCATCGATCCCAGTCGTGATCCCGGCATTTTCTCCGACTCCGTTCTTGTTCTGATGCGATTCCGCTTCTACTTTCTGATCAATCAGGCCCTTGTAATATATGTTATATGTATATATTTTGCATAATAAATTATAATTTAAAAGTATAAAGTTGAGGTTAAGGAAGAAAACTTCTCCATGAAATTGTAGCTTGTTTGGCTGTTCTCTTCAATGGGAACTCTCTGCAATTTAAATGTTCCCATTCTTACATGATGCTTTGATTTCTCTCCACACTGTTTTGGATTATTGTTAGAGAAAAGAATATTGATTCTGTTTATGGATCTTTACAGAATTGCGTTGGATGGAGAAGCATAATTTTGGTTGTTCAAGTTTTAGTTATATGGATGCTTTTGAATGT

Coding sequence (CDS)

ATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAATATGTCTCGCCTGGAGATTCCGGAGGCTACGGCGGCGCCGGGCGTCGAGGAGATGAAATCTCTGGCTCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAGGTGCGTTGTTACCTTCAGCGGCAAAACTAGCTGCCGATTGGAAACCGTCGCTAGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGTTGAGGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAGAGGAAAAGCGGATCTCGAGACGGAGAGGCCAGAGGAGTTAACGGCCGTAGTAACAGTAACGATTTCAGGCGAAGTCCGGCATCGATCCCAGTCGTGATCCCGGCATTTTCTCCGACTCCGTTCTTGTTCTGA

Protein sequence

MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
BLAST of Carg24838 vs. NCBI nr
Match: XP_022932132.1 (uncharacterized protein LOC111438455 [Cucurbita moschata] >XP_023520436.1 uncharacterized protein LOC111783825 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.7 bits (670), Expect = 7.2e-67
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60
           MKFLFEFVSCCVPVNMSRLE PEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA
Sbjct: 1   MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60

Query: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFR 120
           ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFR
Sbjct: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFR 120

Query: 121 RSPASIPVVIPAFSPTPFLF 141
           RSPASIPVVIPAFSPTPFLF
Sbjct: 121 RSPASIPVVIPAFSPTPFLF 140

BLAST of Carg24838 vs. NCBI nr
Match: XP_022985273.1 (uncharacterized protein LOC111483313 [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 1.8e-65
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 0

Query: 1   MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60
           MKFLFEFVSCCVPVNMSRLE PEATAAPGVEEMKSLAPI TRKHRRRKRGALLPSAAKLA
Sbjct: 1   MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPIATRKHRRRKRGALLPSAAKLA 60

Query: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFR 120
           ADWKPSLGAISEDKVVLVLREREKSDDQTA SERSVKRKSGSRDGEARGVNGRSNSNDFR
Sbjct: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAGSERSVKRKSGSRDGEARGVNGRSNSNDFR 120

Query: 121 RSPASIPVVIPAFSPTPFLF 141
           RSPASIPVVIPAFSPTPFLF
Sbjct: 121 RSPASIPVVIPAFSPTPFLF 140

BLAST of Carg24838 vs. NCBI nr
Match: XP_022942037.1 (uncharacterized protein LOC111447225 [Cucurbita moschata])

HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52
Identity = 112/140 (80.00%), Postives = 129/140 (92.14%), Query Frame = 0

Query: 1   MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60
           MKFL EFVSCCVPV++SR+E PEAT APG EE++SLAPITTR HRRR+RGAL  SAAK+A
Sbjct: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMA 60

Query: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFR 120
            DW PSLGAISED VVLV+ ER+KS+D+TAESERSVKRKSGS++G+ARGV+GR+NSNDFR
Sbjct: 61  GDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSQNGKARGVHGRNNSNDFR 120

Query: 121 RSPASIPVVIPAFSPTPFLF 141
           RSPA+IPVVIPAFSPTPFLF
Sbjct: 121 RSPAAIPVVIPAFSPTPFLF 140

BLAST of Carg24838 vs. NCBI nr
Match: XP_023526044.1 (uncharacterized protein LOC111789638 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 3.8e-52
Identity = 112/140 (80.00%), Postives = 128/140 (91.43%), Query Frame = 0

Query: 1   MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60
           MKFL EFVSCCVPV++SR+E PEAT APG EE++SLAPITTR  RRR+RGAL  SAAK+A
Sbjct: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60

Query: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFR 120
            DW PSLGAISED VVLV+ ER+KS+D+TAESERSVKRKSGSR+G+ARGV+GR+NSNDFR
Sbjct: 61  GDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120

Query: 121 RSPASIPVVIPAFSPTPFLF 141
           RSPA+IPVVIPAFSPTPFLF
Sbjct: 121 RSPAAIPVVIPAFSPTPFLF 140

BLAST of Carg24838 vs. NCBI nr
Match: XP_022992846.1 (uncharacterized protein LOC111489053 [Cucurbita maxima])

HSP 1 Score: 211.1 bits (536), Expect = 2.5e-51
Identity = 110/140 (78.57%), Postives = 127/140 (90.71%), Query Frame = 0

Query: 1   MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60
           MKFL EFVSCCVPV++SR+E PEAT APG EE++SLAP+TTR H RR+RGA   SAAK+A
Sbjct: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPVTTRIHLRRRRGAPYTSAAKMA 60

Query: 61  ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFR 120
            DW PSLGAISED VVLV+ ER+KS+D+TAESERSVKRKSGSR+G+ARGV+GR+NSNDFR
Sbjct: 61  GDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120

Query: 121 RSPASIPVVIPAFSPTPFLF 141
           RSPA+IPVVIPAFSPTPFLF
Sbjct: 121 RSPAAIPVVIPAFSPTPFLF 140

BLAST of Carg24838 vs. TrEMBL
Match: tr|A0A1S3BTM8|A0A1S3BTM8_CUCME (uncharacterized protein LOC103493394 OS=Cucumis melo OX=3656 GN=LOC103493394 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 8.1e-51
Identity = 116/143 (81.12%), Postives = 127/143 (88.81%), Query Frame = 0

Query: 1   MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPS-AAKL 60
           MKFLFEFVSCCVPVNMSR+E PE T A   +EM++LAPITTRKHRRRKR ALLPS AAKL
Sbjct: 1   MKFLFEFVSCCVPVNMSRIENPEETEAAASKEMRTLAPITTRKHRRRKRSALLPSAAAKL 60

Query: 61  AADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDF 120
           AADWKPSLGAISEDKVVLV+ EREKSDDQ AE ERSVKRKSGSRDGE+R V+GR NSNDF
Sbjct: 61  AADWKPSLGAISEDKVVLVVMEREKSDDQAAELERSVKRKSGSRDGESR-VHGRKNSNDF 120

Query: 121 --RRSPASIPVVIPAFSPTPFLF 141
             R++P++IPVVIPAFSP PFLF
Sbjct: 121 SLRQNPSAIPVVIPAFSPAPFLF 142

BLAST of Carg24838 vs. TrEMBL
Match: tr|A0A0A0L6G1|A0A0A0L6G1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.3e-48
Identity = 111/143 (77.62%), Postives = 123/143 (86.01%), Query Frame = 0

Query: 1   MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPS-AAKL 60
           MKFLFEFVSCCVPVNMSR++ PE T A G +EM+SL PITTRKH      ALLPS AAKL
Sbjct: 1   MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHXXXXXSALLPSAAAKL 60

Query: 61  AADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDF 120
           AADWKPSLGAISEDKVVLV+ EREKSD+QT E ERSVKRKS SRDGE+RGV+GR+NSNDF
Sbjct: 61  AADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRKSRSRDGESRGVHGRNNSNDF 120

Query: 121 --RRSPASIPVVIPAFSPTPFLF 141
             R+SP++IPVVIPAFSP PFLF
Sbjct: 121 SLRQSPSAIPVVIPAFSPAPFLF 143

BLAST of Carg24838 vs. TrEMBL
Match: tr|W9QQS7|W9QQS7_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021141 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.9e-13
Identity = 72/149 (48.32%), Postives = 94/149 (63.09%), Query Frame = 0

Query: 1   MKFLFEFVSCCVPVNMSRLEIPE----ATAAPGVEEMKSLAPITTRKHRRR-KRGALLPS 60
           M+FL  FVSCC P  M  +  PE    ++A P  EE +SL  + +R++RRR KRG L  S
Sbjct: 1   MRFLV-FVSCCGPTVMPAVR-PESSQSSSATPPAEETRSL--VRSRRYRRRPKRGRLGAS 60

Query: 61  -AAKLAADWKPSLGAISEDKVVLVLRE--REKSDD-QTAESERSVKRKSGSRDGEARGVN 120
            +A +  +WKPSL +ISED VV+V R   +++ D  +TA  ER VKRKSGS  G +R   
Sbjct: 61  GSAPVPVEWKPSLCSISEDNVVMVERSDGQDRQDQYRTAGPERLVKRKSGS--GSSRMNV 120

Query: 121 GRSNSNDFRRSPASIPVVIPAFSPTPFLF 141
             S  +D+ RS  S P VIPAFSPTPF+F
Sbjct: 121 VASFGDDYGRS--SFPTVIPAFSPTPFMF 141

BLAST of Carg24838 vs. TrEMBL
Match: tr|A0A2P5CHI9|A0A2P5CHI9_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_284730 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.8e-11
Identity = 63/144 (43.75%), Postives = 76/144 (52.78%), Query Frame = 0

Query: 1   MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLA----PITTRKHRRRKRGALLPSA 60
           MKFL EFVSCC P             A   EE +SL                        
Sbjct: 1   MKFL-EFVSCCGPALTPSGPTVRPEPARRPEETRSLVQXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  AKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNS 120
              +A+W+PSL +ISED VV V+ +R + D++TA SER VKRKSGSR    R  +G S S
Sbjct: 61  VSASAEWRPSLCSISEDNVV-VIEKRGEEDNRTAGSERMVKRKSGSR--SPRRTSGGSYS 120

Query: 121 NDFRRSPASIPVVIPAFSPTPFLF 141
            D+ RS  S P VIPAFSPTPF+F
Sbjct: 121 EDYGRS--SFPTVIPAFSPTPFMF 138

BLAST of Carg24838 vs. TrEMBL
Match: tr|A0A2P5C424|A0A2P5C424_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_185680 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.8e-11
Identity = 65/143 (45.45%), Postives = 81/143 (56.64%), Query Frame = 0

Query: 1   MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSL--APITTRKHRRRKRGALLPS-AA 60
           MKFL EFVSCC P             A   EE +SL               G L  S + 
Sbjct: 1   MKFL-EFVSCCGPALTPSGPTVRPEPARRPEETRSLXXXXXXXXXXXXXXXGWLGASGSV 60

Query: 61  KLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSN 120
             +A+W+PSL +ISED VV V+ ++ + +++TA SER VKRKSGSR    R  NG S S+
Sbjct: 61  SASAEWRPSLCSISEDNVV-VIEKKGEENNRTAGSERMVKRKSGSR--SPRRTNGVSYSD 120

Query: 121 DFRRSPASIPVVIPAFSPTPFLF 141
           D+ RS  S P VIPAFSPTPF+F
Sbjct: 121 DYGRS--SFPTVIPAFSPTPFMF 137

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022932132.17.2e-6799.29uncharacterized protein LOC111438455 [Cucurbita moschata] >XP_023520436.1 unchar... [more]
XP_022985273.11.8e-6597.86uncharacterized protein LOC111483313 [Cucurbita maxima][more]
XP_022942037.11.3e-5280.00uncharacterized protein LOC111447225 [Cucurbita moschata][more]
XP_023526044.13.8e-5280.00uncharacterized protein LOC111789638 [Cucurbita pepo subsp. pepo][more]
XP_022992846.12.5e-5178.57uncharacterized protein LOC111489053 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BTM8|A0A1S3BTM8_CUCME8.1e-5181.12uncharacterized protein LOC103493394 OS=Cucumis melo OX=3656 GN=LOC103493394 PE=... [more]
tr|A0A0A0L6G1|A0A0A0L6G1_CUCSA1.3e-4877.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1[more]
tr|W9QQS7|W9QQS7_9ROSA3.9e-1348.32Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021141 PE=4 SV=1[more]
tr|A0A2P5CHI9|A0A2P5CHI9_9ROSA4.8e-1143.75Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_284730 PE=4 S... [more]
tr|A0A2P5C424|A0A2P5C424_PARAD4.8e-1145.45Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_185680 PE... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24838-RACarg24838-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..106
NoneNo IPR availablePANTHERPTHR35318FAMILY NOT NAMEDcoord: 1..140