Carg24838 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAACTCACCACCACCACAAGTTCCCGGGATTCTACTACGGACGCCGGAGTGGAGAATGGACTCCTGCCGCTTCAGTCTTTGATACAGATTGTCAATTTTTGGTACTTTCAATTTCGCCTCTTTCTCGGAGTCGGATCAGAGCCTTCGTTCTCGTTCTGACCACTCTCTTCACACCGAGAGACTTGCAGGGCGGTTAGTTTCCCGATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAATATGTCTCGCCTGGAGATTCCGGAGGCTACGGCGGCGCCGGGCGTCGAGGAGATGAAATCTCTGGCTCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAGGTGCGTTGTTACCTTCAGCGGCAAAACTAGCTGCCGATTGGAAACCGTCGCTAGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGTTGAGGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAGAGGAAAAGCGGATCTCGAGACGGAGAGGCCAGAGGAGTTAACGGCCGTAGTAACAGTAACGATTTCAGGTACGTACGTTTGTGATTTCGTGAATCTTCCGTATCATTATCGAAACCGTAAAGATCTGTGAAATGAAAGCGACATCTGAAACGAATCTTTCTGTTATTTTCCCTCTCTCAGGCGAAGTCCGGCATCGATCCCAGTCGTGATCCCGGCATTTTCTCCGACTCCGTTCTTGTTCTGATGCGATTCCGCTTCTACTTTCTGATCAATCAGGCCCTTGTAATATATGTTATATGTATATATTTTGCATAATAAATTATAATTTAAAAGTATAAAGTTGAGGTTAAGGAAGAAAACTTCTCCATGAAATTGTAGCTTGTTTGGCTGTTCTCTTCAATGGGAACTCTCTGCAATTTAAATGTTCCCATTCTTACATGATGCTTTGATTTCTCTCCACACTGTTTTGGATTATTGTTAGAGAAAAGAATATTGATTCTGTTTATGGATCTTTACAGAATTGCGTTGGATGGAGAAGCATAATTTTGGTTGTTCAAGTTTTAGTTATATGGATGCTTTTGAATGT GGAAACTCACCACCACCACAAGTTCCCGGGATTCTACTACGGACGCCGGAGTGGAGAATGGACTCCTGCCGCTTCAGTCTTTGATACAGATTGTCAATTTTTGGTACTTTCAATTTCGCCTCTTTCTCGGAGTCGGATCAGAGCCTTCGTTCTCGTTCTGACCACTCTCTTCACACCGAGAGACTTGCAGGGCGGTTAGTTTCCCGATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAATATGTCTCGCCTGGAGATTCCGGAGGCTACGGCGGCGCCGGGCGTCGAGGAGATGAAATCTCTGGCTCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAGGTGCGTTGTTACCTTCAGCGGCAAAACTAGCTGCCGATTGGAAACCGTCGCTAGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGTTGAGGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAGAGGAAAAGCGGATCTCGAGACGGAGAGGCCAGAGGAGTTAACGGCCGTAGTAACAGTAACGATTTCAGGCGAAGTCCGGCATCGATCCCAGTCGTGATCCCGGCATTTTCTCCGACTCCGTTCTTGTTCTGATGCGATTCCGCTTCTACTTTCTGATCAATCAGGCCCTTGTAATATATGTTATATGTATATATTTTGCATAATAAATTATAATTTAAAAGTATAAAGTTGAGGTTAAGGAAGAAAACTTCTCCATGAAATTGTAGCTTGTTTGGCTGTTCTCTTCAATGGGAACTCTCTGCAATTTAAATGTTCCCATTCTTACATGATGCTTTGATTTCTCTCCACACTGTTTTGGATTATTGTTAGAGAAAAGAATATTGATTCTGTTTATGGATCTTTACAGAATTGCGTTGGATGGAGAAGCATAATTTTGGTTGTTCAAGTTTTAGTTATATGGATGCTTTTGAATGT ATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAATATGTCTCGCCTGGAGATTCCGGAGGCTACGGCGGCGCCGGGCGTCGAGGAGATGAAATCTCTGGCTCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAGGTGCGTTGTTACCTTCAGCGGCAAAACTAGCTGCCGATTGGAAACCGTCGCTAGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGTTGAGGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAGAGGAAAAGCGGATCTCGAGACGGAGAGGCCAGAGGAGTTAACGGCCGTAGTAACAGTAACGATTTCAGGCGAAGTCCGGCATCGATCCCAGTCGTGATCCCGGCATTTTCTCCGACTCCGTTCTTGTTCTGA MKFLFEFVSCCVPVNMSRLEIPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFRRSPASIPVVIPAFSPTPFLF
BLAST of Carg24838 vs. NCBI nr
Match: XP_022932132.1 (uncharacterized protein LOC111438455 [Cucurbita moschata] >XP_023520436.1 uncharacterized protein LOC111783825 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 262.7 bits (670), Expect = 7.2e-67 Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Carg24838 vs. NCBI nr
Match: XP_022985273.1 (uncharacterized protein LOC111483313 [Cucurbita maxima]) HSP 1 Score: 258.1 bits (658), Expect = 1.8e-65 Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 0
BLAST of Carg24838 vs. NCBI nr
Match: XP_022942037.1 (uncharacterized protein LOC111447225 [Cucurbita moschata]) HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52 Identity = 112/140 (80.00%), Postives = 129/140 (92.14%), Query Frame = 0
BLAST of Carg24838 vs. NCBI nr
Match: XP_023526044.1 (uncharacterized protein LOC111789638 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.8 bits (543), Expect = 3.8e-52 Identity = 112/140 (80.00%), Postives = 128/140 (91.43%), Query Frame = 0
BLAST of Carg24838 vs. NCBI nr
Match: XP_022992846.1 (uncharacterized protein LOC111489053 [Cucurbita maxima]) HSP 1 Score: 211.1 bits (536), Expect = 2.5e-51 Identity = 110/140 (78.57%), Postives = 127/140 (90.71%), Query Frame = 0
BLAST of Carg24838 vs. TrEMBL
Match: tr|A0A1S3BTM8|A0A1S3BTM8_CUCME (uncharacterized protein LOC103493394 OS=Cucumis melo OX=3656 GN=LOC103493394 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 8.1e-51 Identity = 116/143 (81.12%), Postives = 127/143 (88.81%), Query Frame = 0
BLAST of Carg24838 vs. TrEMBL
Match: tr|A0A0A0L6G1|A0A0A0L6G1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.3e-48 Identity = 111/143 (77.62%), Postives = 123/143 (86.01%), Query Frame = 0
BLAST of Carg24838 vs. TrEMBL
Match: tr|W9QQS7|W9QQS7_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021141 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.9e-13 Identity = 72/149 (48.32%), Postives = 94/149 (63.09%), Query Frame = 0
BLAST of Carg24838 vs. TrEMBL
Match: tr|A0A2P5CHI9|A0A2P5CHI9_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_284730 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.8e-11 Identity = 63/144 (43.75%), Postives = 76/144 (52.78%), Query Frame = 0
BLAST of Carg24838 vs. TrEMBL
Match: tr|A0A2P5C424|A0A2P5C424_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_185680 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.8e-11 Identity = 65/143 (45.45%), Postives = 81/143 (56.64%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |