Carg24602 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24602
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box protein
Location	Cucurbita_argyrosperma_scaffold_075 : 585604 .. 587855 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCTTCTTCTCATAACAATCTGTTTGATATTTGTTCGCACAGAATGGATTCACTCCCGGATGCTATTTTTCAGTACATTTTGTCACATATGAGCAATGCTCGGGATGTGGCAGTCTGCAACTGTGTATCTAAGCGATGGAAATACTCAACACCATACATTAAAAGTCTCTATTTTCCTCGCAATTCCTTCGACAATCATTCAGGTGGGTTGAGTCCCGACATCATCATTTGGAGAATAATATCATCCATTGTTCACTTAGAGGAGCTTGTTGTTTATAGCCCATTTTCTGGTGCTGGTCTTGCTTCATGGCTGTCTAGTGTCGGCCCTTCGCTTCGACGTCTCGAGCTAAGAATGGACAATCTGGTTGATCTTCAGGCTTGTCAAGATAGCCATTCCAAGTTAGAATGCCTTAAATCTGCGGCAAATTTGGAGTCACTTAAATTATGGGGTGTCTTAATGACACATTCACCAAGGTGGGATGTGTTTCAAAAGCTAAGAAACCTTGAGATTGTTGGTGCTAAGTTAGATGATCCTGCTTTGAACACGGCTCTTCGTGCATGTCCTAATCTATCCAACTTATTGCTCCTTGGCTGTGAAGGCCTTACTTCAGTTTCAATTGAACTGAAGCATTTGGAGCAGTGTAAGCTGGATTTCTATGGCTTGGGAAACTGCTCACTTATGATCAATTCTCCTAACATTCAACTCCTTGAAGTTCAAGGCTGTAGCTGGATTAGAGCCTGTGGGACAAGTTCCTTGAGAAGTCTGTCAATATCGAACAATGCAGGTAATCATCATAACTACAAATCTTCTAAGTACACGAATTATGCTCATAACACTCGATAATAGAAGCCCTTTGTGAGATCCCATAGTTAGGAATCACGAATCTCCACAATGGTATGATATTGTCCACTTTGAACATAAGCTCTCATTGCTTTGCTTTTGGTTTCCCCAAAATGCCTCATACCAATGGAAATGTATTCCTTACTTGCTCTCTTGTTGTACATACTTGGAGTCATCAATATAAACCTTTAGCCAATATTCTTTTTTGCATCTTCTCTCTTCTATTCTTTGTATTCATCTAGATCGAGTGTGTGCGTTGTTGTGCGATCCTATCGGTTGGAGAGGGGAAAAAAACATTCTTTATAAGGGTGTGGAAATTTCTCCCTAGCAGACACATTTGAAAAACCTTGAGGGGAAGTCCGAAAGCAAAAGTCCAAATAGGACAATTATCTACTAGCGGAAGGTCTAGGCCGTTACACCTTAATCATGATAGTTACACCTTTAATCACGATAGTTACACCCTTAATCATGATAACTTAGTTTTTTATTTTGTATGGAAACCTTTGATTCAGGAAGAGTTTACATGGTGGATTTTGATCAGCTGGTTTCATTGGAGTCATTGTCCATAAGAGGAGTTCAATGGTGTTGGGATGCAATAAGCAAAATGCTTGAATTAGGGAGTGAGGTGAAGCATCTTTACATGAAAGTTGAGTTCACCGGAGACTTTGATGCACTTGAACCTTTCCCAGAGATTGACTTTGTTGAGTTTTTCAATAACCATCCAAAGTTGCAAAAGTTTGACATTCATGGAGCCATGTTTGCTGCTCTTTGCCAGAAGAACAGCCTTAAAAATGTAAGTATAATCACTGCCATTTAAGGCAACTTGTTCTTGAGATGGATTTCTTGGCTTATAAATTACGTTCTTTTGGGACTCAGGTGGATCCAGATTTTGTAATCTCGTGTTTGGAGGAAGTATCGGTTTCAGTTAGATCGCCGTTGAATGCCGAACAGAAGATGAATACTCTCGAATCGTTGATAAAGTATGGCAAGAATTTGAAGACTATGGTAATAAAAATTCTTCGAATGAAGAGTAGCCATAGCAGTGCAGATGATTTCTTTGATGAGATTTGCAAGTTTAGATATTGGAATCGCAAGATCGTTCGTATTGAATAAAAGCATAAGTGAGGCACTTTTTCTCTCGTTTTCTAATTTTAATTAATCATTTACCATTTTTATTCTCTGATTACACAGGTTGACCTGCTAAAATGTTTAACTTGACTTGATCATTCTCTAAGAATGAAGTTATAACTAGATGTCAGTTCCAGAGTTCTTCAATGAAGTCATCTATTAAAGATGTTCCGTTGTTGTTATGGATGTTGTTAGCTTGAGCATAATTTAATTGGTCAACTAGTTTTAGGTTGTAAGTTTGAATTCACATTTGCTTGAATTGTAATATTCAAAAGTAAAAAT

mRNA sequence

GTTCTTCTTCTCATAACAATCTGTTTGATATTTGTTCGCACAGAATGGATTCACTCCCGGATGCTATTTTTCAGTACATTTTGTCACATATGAGCAATGCTCGGGATGTGGCAGTCTGCAACTGTGTATCTAAGCGATGGAAATACTCAACACCATACATTAAAAGTCTCTATTTTCCTCGCAATTCCTTCGACAATCATTCAGGTGGGTTGAGTCCCGACATCATCATTTGGAGAATAATATCATCCATTGTTCACTTAGAGGAGCTTGTTGTTTATAGCCCATTTTCTGGTGCTGGTCTTGCTTCATGGCTGTCTAGTGTCGGCCCTTCGCTTCGACGTCTCGAGCTAAGAATGGACAATCTGGTTGATCTTCAGGCTTGTCAAGATAGCCATTCCAAGTTAGAATGCCTTAAATCTGCGGCAAATTTGGAGTCACTTAAATTATGGGGTGTCTTAATGACACATTCACCAAGGTGGGATGTGTTTCAAAAGCTAAGAAACCTTGAGATTGTTGGTGCTAAGTTAGATGATCCTGCTTTGAACACGGCTCTTCGTGCATGTCCTAATCTATCCAACTTATTGCTCCTTGGCTGTGAAGGCCTTACTTCAGTTTCAATTGAACTGAAGCATTTGGAGCAGTGTAAGCTGGATTTCTATGGCTTGGGAAACTGCTCACTTATGATCAATTCTCCTAACATTCAACTCCTTGAAGTTCAAGGCTGTAGCTGGATTAGAGCCTGTGGGACAAGTTCCTTGAGAAGTCTGTCAATATCGAACAATGCAGGAAGAGTTTACATGGTGGATTTTGATCAGCTGGTTTCATTGGAGTCATTGTCCATAAGAGGAGTTCAATGGTGTTGGGATGCAATAAGCAAAATGCTTGAATTAGGGAGTGAGGTGAAGCATCTTTACATGAAAGTTGAGTTCACCGGAGACTTTGATGCACTTGAACCTTTCCCAGAGATTGACTTTGTTGAGTTTTTCAATAACCATCCAAAGTTGCAAAAGTTTGACATTCATGGAGCCATGTTTGCTGCTCTTTGCCAGAAGAACAGCCTTAAAAATGTGGATCCAGATTTTGTAATCTCGTGTTTGGAGGAAGTATCGGTTTCAGTTAGATCGCCGTTGAATGCCGAACAGAAGATGAATACTCTCGAATCGTTGATAAAGTATGGCAAGAATTTGAAGACTATGGTAATAAAAATTCTTCGAATGAAGAGTAGCCATAGCAGTGCAGATGATTTCTTTGATGAGATTTGCAAGTTTAGATATTGGAATCGCAAGATCGTTCGTATTGAATAAAAGCATAAGTGAGGCACTTTTTCTCTCGTTTTCTAATTTTAATTAATCATTTACCATTTTTATTCTCTGATTACACAGGTTGACCTGCTAAAATGTTTAACTTGACTTGATCATTCTCTAAGAATGAAGTTATAACTAGATGTCAGTTCCAGAGTTCTTCAATGAAGTCATCTATTAAAGATGTTCCGTTGTTGTTATGGATGTTGTTAGCTTGAGCATAATTTAATTGGTCAACTAGTTTTAGGTTGTAAGTTTGAATTCACATTTGCTTGAATTGTAATATTCAAAAGTAAAAAT

Coding sequence (CDS)

ATGGATTCACTCCCGGATGCTATTTTTCAGTACATTTTGTCACATATGAGCAATGCTCGGGATGTGGCAGTCTGCAACTGTGTATCTAAGCGATGGAAATACTCAACACCATACATTAAAAGTCTCTATTTTCCTCGCAATTCCTTCGACAATCATTCAGGTGGGTTGAGTCCCGACATCATCATTTGGAGAATAATATCATCCATTGTTCACTTAGAGGAGCTTGTTGTTTATAGCCCATTTTCTGGTGCTGGTCTTGCTTCATGGCTGTCTAGTGTCGGCCCTTCGCTTCGACGTCTCGAGCTAAGAATGGACAATCTGGTTGATCTTCAGGCTTGTCAAGATAGCCATTCCAAGTTAGAATGCCTTAAATCTGCGGCAAATTTGGAGTCACTTAAATTATGGGGTGTCTTAATGACACATTCACCAAGGTGGGATGTGTTTCAAAAGCTAAGAAACCTTGAGATTGTTGGTGCTAAGTTAGATGATCCTGCTTTGAACACGGCTCTTCGTGCATGTCCTAATCTATCCAACTTATTGCTCCTTGGCTGTGAAGGCCTTACTTCAGTTTCAATTGAACTGAAGCATTTGGAGCAGTGTAAGCTGGATTTCTATGGCTTGGGAAACTGCTCACTTATGATCAATTCTCCTAACATTCAACTCCTTGAAGTTCAAGGCTGTAGCTGGATTAGAGCCTGTGGGACAAGTTCCTTGAGAAGTCTGTCAATATCGAACAATGCAGGAAGAGTTTACATGGTGGATTTTGATCAGCTGGTTTCATTGGAGTCATTGTCCATAAGAGGAGTTCAATGGTGTTGGGATGCAATAAGCAAAATGCTTGAATTAGGGAGTGAGGTGAAGCATCTTTACATGAAAGTTGAGTTCACCGGAGACTTTGATGCACTTGAACCTTTCCCAGAGATTGACTTTGTTGAGTTTTTCAATAACCATCCAAAGTTGCAAAAGTTTGACATTCATGGAGCCATGTTTGCTGCTCTTTGCCAGAAGAACAGCCTTAAAAATGTGGATCCAGATTTTGTAATCTCGTGTTTGGAGGAAGTATCGGTTTCAGTTAGATCGCCGTTGAATGCCGAACAGAAGATGAATACTCTCGAATCGTTGATAAAGTATGGCAAGAATTTGAAGACTATGGTAATAAAAATTCTTCGAATGAAGAGTAGCCATAGCAGTGCAGATGATTTCTTTGATGAGATTTGCAAGTTTAGATATTGGAATCGCAAGATCGTTCGTATTGAATAA

Protein sequence

MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFDALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE

Homology

[Close]

BLAST of Carg24602 vs. NCBI nr
Match: XP_022963854.1 (F-box protein At1g10780-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 854.7 bits (2207), Expect = 1.3e-244
Identity = 418/419 (99.76%), Postives = 419/419 (100.00%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAIFQY+LSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Sbjct: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of Carg24602 vs. NCBI nr
Match: XP_022963853.1 (F-box protein At1g10780-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 854.7 bits (2207), Expect = 1.3e-244
Identity = 418/419 (99.76%), Postives = 419/419 (100.00%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAIFQY+LSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI
Sbjct: 22  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 81

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL
Sbjct: 82  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 141

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL
Sbjct: 142 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 201

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS
Sbjct: 202 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 261

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Sbjct: 262 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 321

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS
Sbjct: 322 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 381

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE
Sbjct: 382 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 440

[Close]

BLAST of Carg24602 vs. NCBI nr
Match: XP_023554775.1 (F-box protein At1g10780-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 854.0 bits (2205), Expect = 2.2e-244
Identity = 418/419 (99.76%), Postives = 419/419 (100.00%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYI+SLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIRSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Sbjct: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of Carg24602 vs. NCBI nr
Match: XP_022967595.1 (F-box protein At1g10780-like [Cucurbita maxima] >XP_022967596.1 F-box protein At1g10780-like [Cucurbita maxima])

HSP 1 Score: 853.6 bits (2204), Expect = 2.8e-244
Identity = 418/419 (99.76%), Postives = 418/419 (99.76%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL
Sbjct: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS
Sbjct: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSISNN GRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Sbjct: 241 LSISNNTGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE
Sbjct: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 419

[Close]

BLAST of Carg24602 vs. NCBI nr
Match: XP_022155010.1 (F-box protein At1g10780 [Momordica charantia])

HSP 1 Score: 785.4 bits (2027), Expect = 9.5e-224
Identity = 381/419 (90.93%), Postives = 404/419 (96.42%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QYILSHMSNARDVAVCNCVSKRWK STPYI+SLYFPRNSFDNHSGG+SPD 
Sbjct: 1   MDSLPDAIVQYILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGVSPDA 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           +IW+I+SSIVHLEELVVYSPFSGAGL+SWLS+VGPSLRRLELRMDNLVDLQACQ+S SKL
Sbjct: 61  VIWKILSSIVHLEELVVYSPFSGAGLSSWLSTVGPSLRRLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           EC+K AANLESLKLWGVLMTHSP+WDVF KL+NLEIVGAKL+DPALNTALR CPNLS LL
Sbjct: 121 ECIKCAANLESLKLWGVLMTHSPKWDVFHKLKNLEIVGAKLEDPALNTALRECPNLSKLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LL CEGLTSVSI+LK+LE+CKLDFYGLGNCSLMINSP IQLLEVQGCSWIRA GTSSLRS
Sbjct: 181 LLACEGLTSVSIDLKYLEECKLDFYGLGNCSLMINSPKIQLLEVQGCSWIRAHGTSSLRS 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NNAGRVYMV FD+LVSLESLS+RGVQWCWDAISKMLE GS+VKHLYMKVEFTGDFD
Sbjct: 241 LSIANNAGRVYMVSFDKLVSLESLSLRGVQWCWDAISKMLEWGSQVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSL+NVDPDFVISCLEEVSV VRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLQNVDPDFVISCLEEVSVLVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLESLIKYGKNL+TMVIKIL+MKSSHSSADDFFDEICKFRY NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESLIKYGKNLRTMVIKILKMKSSHSSADDFFDEICKFRYLNRKIVRIE 419

[Close]

BLAST of Carg24602 vs. TAIR10
Match: AT1G10780.1 (F-box/RNI-like superfamily protein)

HSP 1 Score: 559.7 bits (1441), Expect = 1.5e-159
Identity = 277/419 (66.11%), Postives = 332/419 (79.24%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QYILS++++ARDVA CNCVSKRWK ST  +KS+ F RNSF++       D 
Sbjct: 1   MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESIMETDDSDS 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+ ++ISS   LEELVVYSPF+ +GLASW+  V  SLR LELRMDNL   +   +   KL
Sbjct: 61  IVRKMISSSRRLEELVVYSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVVVEGPLKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+  A NLE LKLWGVLM   P+WD+F  LR+LEIVGAK+DD +L+ ALRACPNLSNLL
Sbjct: 121 DCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LL CEG+ S+SI+L +LE CKLDFYG GN  L++ S  +  L+VQGCSWIR   T  L++
Sbjct: 181 LLACEGVKSISIDLPYLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCSWIRVPETKFLKN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSIS+  GRVYMVDF+ L SLE+LSIRGVQWCWDAI  +L+   +VKHL+MKVEFTG+ +
Sbjct: 241 LSISSVTGRVYMVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTGN-E 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           AL+PFPEIDFVEFFNNHPKLQ FDIHGAMFAALCQKNSLK ++  F I CLEEV ++VRS
Sbjct: 301 ALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLESL+KY + LK MVI+ILRMKS+HSSADDF D+ICKFR+ N  +V IE
Sbjct: 361 PLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418

[Close]

BLAST of Carg24602 vs. TAIR10
Match: AT5G56390.1 (F-box/RNI-like/FBD-like domains-containing protein)

HSP 1 Score: 45.1 bits (105), Expect = 1.3e-04
Identity = 48/214 (22.43%), Postives = 90/214 (42.06%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           +  L D +   ILS + NA+DV     +SKRW+Y    + SL +  +  D   G  S   
Sbjct: 4   ISQLHDELLLGILSLLPNAKDVVATMVLSKRWRYLWMMVPSLVYDDSYQDIDYGRFS--- 63

Query: 61  IIWRIISSIVHLEELVVYSP-------FSGAGLASWLSSVGPSLRRLELRMDNLVDLQAC 120
              R +   + L +  V            G+G     ++    +R+L +++D+     + 
Sbjct: 64  ---RFVDRSLALHKAPVIDTLHFKLGHICGSGDTLIGAAEKCCVRKLIIKIDDTSSRSSK 123

Query: 121 QDSHSKLECLKSAAN--LESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKL-DDPALNTAL 180
            D       L S  +  L  LKL  V++        F  L+ L +   K   +  +N  +
Sbjct: 124 TDQVILPMSLCSGVHIMLADLKLQNVVLVDVSTPVSFPSLKRLRLKSVKYPGNEFVNNLI 183

Query: 181 RACPNLSNLLLLGC--EGLTSVSIELKHLEQCKL 203
            +CP L +L++  C  + +T +++ +  L++  L
Sbjct: 184 SSCPVLEDLVVKQCSDDNVTILTVRVPSLKRLSL 211

[Close]

BLAST of Carg24602 vs. Swiss-Prot
Match: sp|Q9SAC4|FB2_ARATH (F-box protein At1g10780 OS=Arabidopsis thaliana OX=3702 GN=At1g10780 PE=2 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 2.8e-158
Identity = 277/419 (66.11%), Postives = 332/419 (79.24%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QYILS++++ARDVA CNCVSKRWK ST  +KS+ F RNSF++       D 
Sbjct: 1   MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESIMETDDSDS 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+ ++ISS   LEELVVYSPF+ +GLASW+  V  SLR LELRMDNL   +   +   KL
Sbjct: 61  IVRKMISSSRRLEELVVYSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVVVEGPLKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+  A NLE LKLWGVLM   P+WD+F  LR+LEIVGAK+DD +L+ ALRACPNLSNLL
Sbjct: 121 DCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LL CEG+ S+SI+L +LE CKLDFYG GN  L++ S  +  L+VQGCSWIR   T  L++
Sbjct: 181 LLACEGVKSISIDLPYLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCSWIRVPETKFLKN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSIS+  GRVYMVDF+ L SLE+LSIRGVQWCWDAI  +L+   +VKHL+MKVEFTG+ +
Sbjct: 241 LSISSVTGRVYMVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTGN-E 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           AL+PFPEIDFVEFFNNHPKLQ FDIHGAMFAALCQKNSLK ++  F I CLEEV ++VRS
Sbjct: 301 ALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLESL+KY + LK MVI+ILRMKS+HSSADDF D+ICKFR+ N  +V IE
Sbjct: 361 PLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418

[Close]

BLAST of Carg24602 vs. TrEMBL
Match: tr|A0A0A0KGD4|A0A0A0KGD4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411180 PE=4 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 5.3e-215
Identity = 367/419 (87.59%), Postives = 394/419 (94.03%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI Q ILSHMSNARDVAVCNCVSKRWK STPYI+SLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           IIWRIISSIVHLEELVVYSPF+GAGLASWLSSVGP+LR LELRMDNLVDLQACQ+S SKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           ECLKSAANLE+LKLWGVLMTHSPRWDVFQKL+NLEIVGAK +DPALNTAL ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LL CEGL+SVSIELK LEQCKLDFYGLGNCSL+IN+P +QLLEVQGCSWIRA GTSSLR+
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTSSLRN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NN GRVYMVDFD+L SLE LS+RG+QWCW+AISK+LE GSEVKHLYMKVEFTGD+D
Sbjct: 241 LSIANNHGRVYMVDFDKLASLEVLSLRGIQWCWNAISKILECGSEVKHLYMKVEFTGDYD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQK+SLK+VDPDF ISCLEEV V+VRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLES  KY KNLK +VI ILRMKSSH SADDFFD+ICKF++ + KIVRIE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFKHCHPKIVRIE 419

[Close]

BLAST of Carg24602 vs. TrEMBL
Match: tr|A0A1S4DYC7|A0A1S4DYC7_CUCME (F-box protein At1g10780 OS=Cucumis melo OX=3656 GN=LOC103491319 PE=4 SV=1)

HSP 1 Score: 755.4 bits (1949), Expect = 7.0e-215
Identity = 367/419 (87.59%), Postives = 394/419 (94.03%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI Q ILSHMSNARDVAVCNCVSKRWK STPYI+SLYFPRNSFDNHSGGLSPD 
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDN 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           IIWRIISSIVHLEELVVYSPF+GAGL+SWLSSVGPSLR LELRMDNLVDLQACQ+S SKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLSSWLSSVGPSLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           ECLKSAANLE+LKLWGVLMTHSPRWDVFQKL+NLEIVGAK +DPALNTAL ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LL CEGL+SVSIELK LEQCKLDFYGLGNCSL+IN+P +QLLEVQGCSWIRA GT+SLR+
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTTSLRN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NN GRVYMVDFD+LVSLE+LS+RG+QWCW AIS++LE GSEVKHLYMKVEFTGDFD
Sbjct: 241 LSIANNHGRVYMVDFDKLVSLETLSLRGIQWCWSAISRILECGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQK+SLK+VDPDF ISCLEEV V+VRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLES  KY KNLK +VI ILRMKSSH SADDFFD+ICKFR+ + KIVRIE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFRHCHPKIVRIE 419

[Close]

BLAST of Carg24602 vs. TrEMBL
Match: tr|A0A2P5F929|A0A2P5F929_9ROSA (F-box domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_097730 PE=4 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 4.5e-198
Identity = 333/419 (79.47%), Postives = 376/419 (89.74%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QY+LSHM+NARDVAVCNCVSKRWK S P+I+SLYFPRNSFDNHSG  SPD 
Sbjct: 1   MDSLPDAIVQYVLSHMNNARDVAVCNCVSKRWKDSMPFIRSLYFPRNSFDNHSGRDSPDD 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+WR++SSI  LEELVVYSPFSGAGL+SWLS +G SLR LELRMDNL + Q C +S +KL
Sbjct: 61  IVWRMVSSIEKLEELVVYSPFSGAGLSSWLSVMGSSLRHLELRMDNLAEQQVCHESPTKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+ SA NLESLKLWGVLMTHSP+WDVFQKLRNLEIVGA+L+DPAL T L ACPNL+NLL
Sbjct: 121 DCISSAKNLESLKLWGVLMTHSPKWDVFQKLRNLEIVGARLEDPALTTLLSACPNLANLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEG+ S+SI L +LEQCKLDFYGLGNCS  +NSP I++LEVQGCSWIR   T+ LRS
Sbjct: 181 LLGCEGVRSISINLPNLEQCKLDFYGLGNCSFSMNSPKIEVLEVQGCSWIRVRETNRLRS 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NNAGRVYMVDF +LV+LE LSIRGVQWCWDAI  ML+  SEVKHLYMKVEFTGDF+
Sbjct: 241 LSIANNAGRVYMVDFGKLVALEFLSIRGVQWCWDAICNMLQWASEVKHLYMKVEFTGDFE 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           AL+PFPEIDFV+FFNNHPKLQKFD+HGAMFAALCQKNSL++VD  F+I CLEEV ++VRS
Sbjct: 301 ALQPFPEIDFVDFFNNHPKLQKFDVHGAMFAALCQKNSLRSVDRGFIIPCLEEVVITVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLES +KYGKNLKTMVIKIL+MKS+HSSADDFFDEIC+FRY NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESFLKYGKNLKTMVIKILQMKSNHSSADDFFDEICRFRYMNRKIVRIE 419

[Close]

BLAST of Carg24602 vs. TrEMBL
Match: tr|A0A2P5BUA2|A0A2P5BUA2_PARAD (F-box domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_209920 PE=4 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 1.9e-196
Identity = 330/419 (78.76%), Postives = 373/419 (89.02%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QY+LSHM+NARDVAVCNCVSKRWK S P+I+SLYFPRNSFDNH G  SPD 
Sbjct: 1   MDSLPDAIVQYLLSHMNNARDVAVCNCVSKRWKDSMPFIRSLYFPRNSFDNHLGRDSPDD 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+W ++SSI  LEELVVYSPFSGAGL+SWLS +G SLR LELRMDNL + + C +S SKL
Sbjct: 61  IVWSMVSSIEKLEELVVYSPFSGAGLSSWLSVIGSSLRHLELRMDNLAEQEVCHESPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+ SA NLESLKLWGVLMTHSP+WDVFQ+LRNLEIVGA+L+DPAL T L ACPNL+NLL
Sbjct: 121 DCISSAKNLESLKLWGVLMTHSPKWDVFQQLRNLEIVGARLEDPALTTLLSACPNLTNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEG+ S+SI L HLEQCKLDFYGLGNCS  +NSP I++LEVQGCSWIR   T+ LR 
Sbjct: 181 LLGCEGVRSISINLPHLEQCKLDFYGLGNCSFSMNSPKIEVLEVQGCSWIRVRETNRLRI 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NNAGRVYMVDF +LV+LE LSIRGVQWCWDAI  ML+  SEVKHLYMKVEFTGDF+
Sbjct: 241 LSIANNAGRVYMVDFGKLVALEFLSIRGVQWCWDAICNMLQSASEVKHLYMKVEFTGDFE 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           AL+PFPEIDFV+FFNNHPKLQKFD+HGAMFAALCQKNSL++VD  F+I CLEEV ++VRS
Sbjct: 301 ALQPFPEIDFVDFFNNHPKLQKFDVHGAMFAALCQKNSLRSVDRGFIIPCLEEVVITVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLES +KYGKNLKTMVIKIL+MKS+HSSADDFFDEIC+FRY NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESFLKYGKNLKTMVIKILQMKSNHSSADDFFDEICRFRYMNRKIVRIE 419

[Close]

BLAST of Carg24602 vs. TrEMBL
Match: tr|A0A2N9HZB2|A0A2N9HZB2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44962 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 7.5e-193
Identity = 325/419 (77.57%), Postives = 372/419 (88.78%), Query Frame = 0


Query: 1   MDSLPDAIFQYILSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI  YILS+++NARDVAVCNCVSKRWK S PYI+SLYFPRNSFDNH+G   PD 
Sbjct: 1   MDSLPDAIVHYILSYINNARDVAVCNCVSKRWKDSLPYIRSLYFPRNSFDNHTGQEQPDN 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           ++W++ISSIV LEELVVY+PFSGAGLASWLS  G SLR LELRMDNLV+ Q C +  SKL
Sbjct: 61  VVWKMISSIVRLEELVVYTPFSGAGLASWLSLAGTSLRHLELRMDNLVENQTCNEGPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+ +A NLESLKLWGVLMTH P+WD FQKL +LEIVGA+L+DPAL+ ALRACPNL+NLL
Sbjct: 121 DCISAAKNLESLKLWGVLMTHPPKWDTFQKLWDLEIVGARLEDPALSAALRACPNLTNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEG+ SVSI+L +L+QCKLDFYGLGNCSL + SP I+ LEVQGCSWIR   T+SL++
Sbjct: 181 LLGCEGVRSVSIDLPNLQQCKLDFYGLGNCSLSLTSPKIEFLEVQGCSWIRVRETNSLKN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NNAGRVYMVDF +L +LE LSIRGVQWCWDAIS ML+  SEVKHLYMKVEFTGDF+
Sbjct: 241 LSIANNAGRVYMVDFGKLEALEFLSIRGVQWCWDAISNMLKWASEVKHLYMKVEFTGDFE 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           AL+PFPEIDFVEFFN+HPKLQKFDIHGAMFAALCQKNSLK+VD  F+I CLEE+ V+VRS
Sbjct: 301 ALQPFPEIDFVEFFNSHPKLQKFDIHGAMFAALCQKNSLKHVDSGFIIPCLEELVVAVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLES +KYGKNLKTM IKIL+MKSSHSSADDFF+E+C+F Y NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESFLKYGKNLKTMAIKILQMKSSHSSADDFFEEVCRFTYMNRKIVRIE 419

The following BLAST results are available for this feature:

BLAST of Carg24602 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963854.1	1.3e-244	99.76	F-box protein At1g10780-like isoform X2 [Cucurbita moschata]	[more]
XP_022963853.1	1.3e-244	99.76	F-box protein At1g10780-like isoform X1 [Cucurbita moschata]	[more]
XP_023554775.1	2.2e-244	99.76	F-box protein At1g10780-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967595.1	2.8e-244	99.76	F-box protein At1g10780-like [Cucurbita maxima] >XP_022967596.1 F-box protein At...	[more]
XP_022155010.1	9.5e-224	90.93	F-box protein At1g10780 [Momordica charantia]	[more]

BLAST of Carg24602 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10780.1	1.5e-159	66.11	F-box/RNI-like superfamily protein	[more]
AT5G56390.1	1.3e-04	22.43	F-box/RNI-like/FBD-like domains-containing protein	[more]

BLAST of Carg24602 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SAC4\|FB2_ARATH	2.8e-158	66.11	F-box protein At1g10780 OS=Arabidopsis thaliana OX=3702 GN=At1g10780 PE=2 SV=1	[more]

BLAST of Carg24602 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KGD4\|A0A0A0KGD4_CUCSA	5.3e-215	87.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411180 PE=4 SV=1	[more]
tr\|A0A1S4DYC7\|A0A1S4DYC7_CUCME	7.0e-215	87.59	F-box protein At1g10780 OS=Cucumis melo OX=3656 GN=LOC103491319 PE=4 SV=1	[more]
tr\|A0A2P5F929\|A0A2P5F929_9ROSA	4.5e-198	79.47	F-box domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_09773...	[more]
tr\|A0A2P5BUA2\|A0A2P5BUA2_PARAD	1.9e-196	78.76	F-box domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_2...	[more]
tr\|A0A2N9HZB2\|A0A2N9HZB2_FAGSY	7.5e-193	77.57	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44962 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR032675	LRR_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24602-RA	Carg24602-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 1..293 e-value: 5.6E-25 score: 90.0
None	No IPR available	PANTHER	PTHR44906:SF1	SUBFAMILY NOT NAMED	coord: 1..419
None	No IPR available	PANTHER	PTHR44906	FAMILY NOT NAMED	coord: 1..419
None	No IPR available	SUPERFAMILY	SSF52047	RNI-like	coord: 64..296
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 2..34

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24602	CmaCh19G003030	Cucurbita maxima (Rimu)	carcmaB0916
Carg24602	CmaCh11G015950	Cucurbita maxima (Rimu)	carcmaB0915
Carg24602	CmoCh11G015280	Cucurbita moschata (Rifu)	carcmoB0889
Carg24602	CmoCh19G003290	Cucurbita moschata (Rifu)	carcmoB0890
Carg24602	Lsi03G008720	Bottle gourd (USVL1VR-Ls)	carlsiB590
Carg24602	Cp4.1LG15g02710	Cucurbita pepo (Zucchini)	carcpeB0919
Carg24602	Cp4.1LG04g06710	Cucurbita pepo (Zucchini)	carcpeB0920
Carg24602	Bhi05G000565	Wax gourd	carwgoB0761

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24602	Carg24013	Silver-seed gourd	carcarB566

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24602	Cucumber (Chinese Long) v3	carcucB0676
Carg24602	Melon (DHL92) v3.5.1	carmeB0645
Carg24602	Melon (DHL92) v3.6.1	carmedB0655
Carg24602	Watermelon (97103) v2	carwmbB0673
Carg24602	Cucumber (Gy14) v2	carcgybB0642
Carg24602	Cucumber (Gy14) v1	carcgyB0719
Carg24602	Wild cucumber (PI 183967)	carcpiB0674
Carg24602	Cucumber (Chinese Long) v2	carcuB0665