CmoCh19G003290 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G003290
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	F-box protein
Location	Cmo_Chr19 : 2691946 .. 2693902 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCGCTCCCGGATGCTATTTTTCAGTACGTTTTGTCACATATGAGCAATGCTCGGGATGTGGCAGTCTGCAACTGTGTATCTAAGCGATGGAAATACTCAACACCATACATTAAAAGTCTCTATTTTCCTCGCAATTCCTTCGACAATCATTCAGGTGGGTTGAGTCCCGACATCATCATTTGGAGAATAATATCATCCATTGTTCACTTAGAGGAGCTTGTTGTTTATAGCCCATTTTCTGGTGCTGGTCTTGCTTCATGGCTGTCTAGTGTCGGCCCTTCGCTTCGACGTCTCGAGCTAAGAATGGACAATCTGGTTGATCTTCAGGCTTGTCAAGATAGCCATTCCAAGTTAGAATGCCTTAAATCTGCAGCAAATTTGGAGTCACTTAAATTATGGGGTGTCTTAATGACACATTCACCAAGGTGGGATGTGTTTCAAAAGCTAAGAAACCTTGAGATTGTTGGTGCTAAGTTAGATGATCCTGCTTTGAACACGGCTCTTCGTGCATGTCCTAATCTATCCAACTTATTGCTCCTTGGCTGTGAAGGCCTTACTTCAGTTTCAATTGAACTGAAGCATTTGGAGCAGTGTAAGCTGGATTTCTATGGCTTGGGAAACTGCTCACTCATGATCAATTCTCCTAACATTCAACTCCTTGAAGTTCAAGGCTGTAGCTGGATTAGAGCCTGTGGGACAAGTTCCTTGAGAAGTCTGTCAATATCCAACAATGCAGGTAATCATCATAACTACAAATCTTCTAAGCACACGAATTATGCTCATAACACTCGATAATAGAAGCCCTTTGTGAGATCCCACAGTTAGGAATCACGAATCTCCTCAATGGTACGATATTGTCCACTTTGAGCATAAGCTCTCATTGCTTTGCTTTTGGTTTCCCCAAAATACCTCGTAACAATGGAAATGTAGTCCTTACGTGTTCTCTTGTAGTACATACCTGAAGTCATCAATATAAACCTTTAGCCAATATTCCTTCTTGCATTTTCTCTCTTCTATTCTTTGTATTCATCTAGATCGAGTGTGTGCGTTGTTGTGCGATCCTATCGGTTGGAGAGGGGAAATAAGCATTCTTTATAAGGGTGTAGAAATTTCTTCCTAGTAGACGCATTTTAAAAACCTTGAGGGGAAGTCCGAAAGGAAAAGTCCAAATAAGACAATTATCTACTAACGGAGGGTTTGGGTCGTTACACCTTAATCATGATAACTTAGTTTTTTATTTTGTATGGAAACCTTTGATTCAGGAAGAGTTTACATGGTGGATTTTGATCAGCTGGTTTCATTGGAGTCATTGTCCATAAGAGGAGTTCAATGGTGCTGGGATGCAATAAGCAAAATGCTTGAATTAGGGAGTGAGGTGAAGCATCTTTACATGAAAGTTGAGTTCACCGGAGACTTTGATGCACTTGAACCTTTCCCAGAGATTGACTTTGTTGAGTTTTTCAATAACCATCCAAAGTTGCAAAAGTTTGACATTCATGGAGCCATGTTTGCTGCTCTTTGCCAGAAGAACAGCCTTAAAAATGTAAGTATAATCACTGCCATTTAAGGCAACTTGTTCTTGAAATGGATTTCTTGGCTTATAAATTACGTTCTTTTGGGACTCAGGTGGATCCAGATTTTGTAATCTCGTGTTTGGAGGAAGTATCGGTTTCGGTTAGATCGCCGTTGAATGCCGAACAGAAGATGAATACTCTCGAATCGTTGATAAAGTATGGCAAGAATTTGAAGACCATGGTAATAAAAATTCTTCGAATGAAGAGTAGCCATAGCAGTGCAGATGATTTCTTTGATGAGATTTGCAAGTTTAGATATTGGAATCGCAAGATCGTTCGTATCGAATAAAAGCATAAGTGAGGCACTTTTTTTCTCGTTTTCTAATTTTAATTGATCATTTACCATTTTTATTCTCTGATTACACAGGTTGACCTGC

mRNA sequence

ATGGATTCGCTCCCGGATGCTATTTTTCAGTACGTTTTGTCACATATGAGCAATGCTCGGGATGTGGCAGTCTGCAACTGTGTATCTAAGCGATGGAAATACTCAACACCATACATTAAAAGTCTCTATTTTCCTCGCAATTCCTTCGACAATCATTCAGGTGGGTTGAGTCCCGACATCATCATTTGGAGAATAATATCATCCATTGTTCACTTAGAGGAGCTTGTTGTTTATAGCCCATTTTCTGGTGCTGGTCTTGCTTCATGGCTGTCTAGTGTCGGCCCTTCGCTTCGACGTCTCGAGCTAAGAATGGACAATCTGGTTGATCTTCAGGCTTGTCAAGATAGCCATTCCAAGTTAGAATGCCTTAAATCTGCAGCAAATTTGGAGTCACTTAAATTATGGGGTGTCTTAATGACACATTCACCAAGGTGGGATGTGTTTCAAAAGCTAAGAAACCTTGAGATTGTTGGTGCTAAGTTAGATGATCCTGCTTTGAACACGGCTCTTCGTGCATGTCCTAATCTATCCAACTTATTGCTCCTTGGCTGTGAAGGCCTTACTTCAGTTTCAATTGAACTGAAGCATTTGGAGCAGTGTAAGCTGGATTTCTATGGCTTGGGAAACTGCTCACTCATGATCAATTCTCCTAACATTCAACTCCTTGAAGTTCAAGGCTGTAGCTGGATTAGAGCCTGTGGGACAAGTTCCTTGAGAAGTCTGTCAATATCCAACAATGCAGGAAGAGTTTACATGGTGGATTTTGATCAGCTGGTTTCATTGGAGTCATTGTCCATAAGAGGAGTTCAATGGTGCTGGGATGCAATAAGCAAAATGCTTGAATTAGGGAGTGAGGTGAAGCATCTTTACATGAAAGTTGAGTTCACCGGAGACTTTGATGCACTTGAACCTTTCCCAGAGATTGACTTTGTTGAGTTTTTCAATAACCATCCAAAGTTGCAAAAGTTTGACATTCATGGAGCCATGTTTGCTGCTCTTTGCCAGAAGAACAGCCTTAAAAATGTGGATCCAGATTTTGTAATCTCGTGTTTGGAGGAAGTATCGGTTTCGGTTAGATCGCCGTTGAATGCCGAACAGAAGATGAATACTCTCGAATCGTTGATAAAGTATGGCAAGAATTTGAAGACCATGGTAATAAAAATTCTTCGAATGAAGAGTAGCCATAGCAGTGCAGATGATTTCTTTGATGAGATTTGCAAGTTTAGATATTGGAATCGCAAGATCGTTCGTATCGAATAAAAGCATAAGTGAGGCACTTTTTTTCTCGTTTTCTAATTTTAATTGATCATTTACCATTTTTATTCTCTGATTACACAGGTTGACCTGC

Coding sequence (CDS)

ATGGATTCGCTCCCGGATGCTATTTTTCAGTACGTTTTGTCACATATGAGCAATGCTCGGGATGTGGCAGTCTGCAACTGTGTATCTAAGCGATGGAAATACTCAACACCATACATTAAAAGTCTCTATTTTCCTCGCAATTCCTTCGACAATCATTCAGGTGGGTTGAGTCCCGACATCATCATTTGGAGAATAATATCATCCATTGTTCACTTAGAGGAGCTTGTTGTTTATAGCCCATTTTCTGGTGCTGGTCTTGCTTCATGGCTGTCTAGTGTCGGCCCTTCGCTTCGACGTCTCGAGCTAAGAATGGACAATCTGGTTGATCTTCAGGCTTGTCAAGATAGCCATTCCAAGTTAGAATGCCTTAAATCTGCAGCAAATTTGGAGTCACTTAAATTATGGGGTGTCTTAATGACACATTCACCAAGGTGGGATGTGTTTCAAAAGCTAAGAAACCTTGAGATTGTTGGTGCTAAGTTAGATGATCCTGCTTTGAACACGGCTCTTCGTGCATGTCCTAATCTATCCAACTTATTGCTCCTTGGCTGTGAAGGCCTTACTTCAGTTTCAATTGAACTGAAGCATTTGGAGCAGTGTAAGCTGGATTTCTATGGCTTGGGAAACTGCTCACTCATGATCAATTCTCCTAACATTCAACTCCTTGAAGTTCAAGGCTGTAGCTGGATTAGAGCCTGTGGGACAAGTTCCTTGAGAAGTCTGTCAATATCCAACAATGCAGGAAGAGTTTACATGGTGGATTTTGATCAGCTGGTTTCATTGGAGTCATTGTCCATAAGAGGAGTTCAATGGTGCTGGGATGCAATAAGCAAAATGCTTGAATTAGGGAGTGAGGTGAAGCATCTTTACATGAAAGTTGAGTTCACCGGAGACTTTGATGCACTTGAACCTTTCCCAGAGATTGACTTTGTTGAGTTTTTCAATAACCATCCAAAGTTGCAAAAGTTTGACATTCATGGAGCCATGTTTGCTGCTCTTTGCCAGAAGAACAGCCTTAAAAATGTGGATCCAGATTTTGTAATCTCGTGTTTGGAGGAAGTATCGGTTTCGGTTAGATCGCCGTTGAATGCCGAACAGAAGATGAATACTCTCGAATCGTTGATAAAGTATGGCAAGAATTTGAAGACCATGGTAATAAAAATTCTTCGAATGAAGAGTAGCCATAGCAGTGCAGATGATTTCTTTGATGAGATTTGCAAGTTTAGATATTGGAATCGCAAGATCGTTCGTATCGAATAA

Homology

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BLAST of CmoCh19G003290 vs. Swiss-Prot
Match: FB2_ARATH (F-box protein At1g10780 OS=Arabidopsis thaliana GN=At1g10780 PE=2 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 3.6e-158
Identity = 276/419 (65.87%), Postives = 332/419 (79.24%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QY+LS++++ARDVA CNCVSKRWK ST  +KS+ F RNSF++       D 
Sbjct: 1   MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESIMETDDSDS 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+ ++ISS   LEELVVYSPF+ +GLASW+  V  SLR LELRMDNL   +   +   KL
Sbjct: 61  IVRKMISSSRRLEELVVYSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVVVEGPLKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+  A NLE LKLWGVLM   P+WD+F  LR+LEIVGAK+DD +L+ ALRACPNLSNLL
Sbjct: 121 DCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LL CEG+ S+SI+L +LE CKLDFYG GN  L++ S  +  L+VQGCSWIR   T  L++
Sbjct: 181 LLACEGVKSISIDLPYLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCSWIRVPETKFLKN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSIS+  GRVYMVDF+ L SLE+LSIRGVQWCWDAI  +L+   +VKHL+MKVEFTG+ +
Sbjct: 241 LSISSVTGRVYMVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTGN-E 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           AL+PFPEIDFVEFFNNHPKLQ FDIHGAMFAALCQKNSLK ++  F I CLEEV ++VRS
Sbjct: 301 ALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLESL+KY + LK MVI+ILRMKS+HSSADDF D+ICKFR+ N  +V IE
Sbjct: 361 PLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418

[Close]

BLAST of CmoCh19G003290 vs. TrEMBL
Match: A0A0A0KGD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411180 PE=4 SV=1)

HSP 1 Score: 755.4 bits (1949), Expect = 3.8e-215
Identity = 366/419 (87.35%), Postives = 394/419 (94.03%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI Q +LSHMSNARDVAVCNCVSKRWK STPYI+SLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           IIWRIISSIVHLEELVVYSPF+GAGLASWLSSVGP+LR LELRMDNLVDLQACQ+S SKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           ECLKSAANLE+LKLWGVLMTHSPRWDVFQKL+NLEIVGAK +DPALNTAL ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LL CEGL+SVSIELK LEQCKLDFYGLGNCSL+IN+P +QLLEVQGCSWIRA GTSSLR+
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTSSLRN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NN GRVYMVDFD+L SLE LS+RG+QWCW+AISK+LE GSEVKHLYMKVEFTGD+D
Sbjct: 241 LSIANNHGRVYMVDFDKLASLEVLSLRGIQWCWNAISKILECGSEVKHLYMKVEFTGDYD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQK+SLK+VDPDF ISCLEEV V+VRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLES  KY KNLK +VI ILRMKSSH SADDFFD+ICKF++ + KIVRIE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFKHCHPKIVRIE 419

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BLAST of CmoCh19G003290 vs. TrEMBL
Match: V4T1B3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001293mg PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 4.1e-193
Identity = 332/419 (79.24%), Postives = 368/419 (87.83%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QYVLSHM NARDVAVCNCVSKRWK S PY+KSLYFPRNSFDN S   SPD 
Sbjct: 1   MDSLPDAIVQYVLSHMKNARDVAVCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDD 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+ ++I SIV LEELVVY+PFS AGL SWL   G +L+ LELRMDNL D Q C ++ SKL
Sbjct: 61  IVLKMIYSIVCLEELVVYTPFSKAGLDSWLMLAGSTLKHLELRMDNLADYQGCLENPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+  A NLESLKLWGVLM  SP+WDVF KL+NLEIVGA+L+DPAL+TALRACPNL+NLL
Sbjct: 121 DCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLEDPALSTALRACPNLTNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEG+ SVSIEL HLEQCKLDFYGLGNCSL ++ P IQ LEVQGCSWIR   T+ LR+
Sbjct: 181 LLGCEGVRSVSIELPHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQGCSWIRVQETNCLRN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSISNNAGRVYMVDF +LV+LESL++RGVQWCWDAISKML   SEVKHLYMKVEFTGDFD
Sbjct: 241 LSISNNAGRVYMVDFGKLVALESLTLRGVQWCWDAISKMLYWASEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
            L+PFPE+DFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNV+  FVI CLEEV V+VRS
Sbjct: 301 TLQPFPEVDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVESGFVIPCLEEVVVTVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLESL+KYGKNLKTMVI+IL+MKSSHSS+DDFFDEIC+FR  NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESLLKYGKNLKTMVIRILQMKSSHSSSDDFFDEICRFRCMNRKIVRIE 419

[Close]

BLAST of CmoCh19G003290 vs. TrEMBL
Match: A0A067DJS4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014774mg PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 3.4e-192
Identity = 329/419 (78.52%), Postives = 367/419 (87.59%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QY+LSHM NARDVA+CNCVSKRWK S PY+KSLYFPRNSFDN S   SPD 
Sbjct: 1   MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDD 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+ ++I SIV LEELVVY+PFS AGL SWL   G +L+ LELRMDNL D Q C ++ SKL
Sbjct: 61  IVLKMIYSIVCLEELVVYTPFSKAGLDSWLMLAGSTLKHLELRMDNLADYQGCLENPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+  A NLESLKLWGVLM  SP+WDVF KL+NLEIVGA+L+DPAL+TALRACPNL+NLL
Sbjct: 121 DCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLEDPALSTALRACPNLTNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEG+ SVSIEL HLEQCKLDFYGLGNCSL ++ P IQ LEVQGCSWIR   T+ LR+
Sbjct: 181 LLGCEGVRSVSIELPHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQGCSWIRVQETNCLRN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSISNNAGRVYMVDF +L +LESL++RGVQWCWDAISKML   SEVKHLYMKVEFTGDFD
Sbjct: 241 LSISNNAGRVYMVDFGKLAALESLTLRGVQWCWDAISKMLYWASEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
            L+PFPE+DFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNV+  FVI CLEEV V+VRS
Sbjct: 301 TLQPFPEVDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVESGFVIPCLEEVVVTVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLESL+KYGKNLKTMVI+IL+MKSSHSS+DDFFDEIC+FR  NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESLLKYGKNLKTMVIRILQMKSSHSSSDDFFDEICRFRCMNRKIVRIE 419

[Close]

BLAST of CmoCh19G003290 vs. TrEMBL
Match: M5XCY6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006287mg PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 8.5e-191
Identity = 325/419 (77.57%), Postives = 366/419 (87.35%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QY+LSHM+NARDVA+CNCVSKRWK S PYI+SLYFPRNSFDNH G  SPD 
Sbjct: 1   MDSLPDAIVQYILSHMNNARDVAICNCVSKRWKDSIPYIRSLYFPRNSFDNHLGRDSPDD 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+ ++IS I  LE LVVYSPFS AGLASWL  +GP+LR LELRMDNL + QAC +  SKL
Sbjct: 61  IVLKMISLIEKLENLVVYSPFSAAGLASWLMLIGPTLRYLELRMDNLAEQQACHEIPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +CL +A NLESLKLWGVLMT SP WDVFQKL NLEIVGA+L+DPAL+T L+ACPNL+NLL
Sbjct: 121 DCLIAAENLESLKLWGVLMTRSPNWDVFQKLSNLEIVGARLEDPALSTVLQACPNLTNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEG+ SVSIEL +LEQCKLDFYGLGNCS  +  P I++LEVQGCSWIR      LR+
Sbjct: 181 LLGCEGVRSVSIELPYLEQCKLDFYGLGNCSFSMECPKIKVLEVQGCSWIRVREAKYLRN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NNAGRVYMVDF++L +LE LSIRGVQWCWDAIS ML+  SEVKHL+MKVEFTGDF+
Sbjct: 241 LSIANNAGRVYMVDFEKLGALEFLSIRGVQWCWDAISNMLQWASEVKHLFMKVEFTGDFE 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
            L+PFPE+DFV+FFNNHPKLQKFDIHGAMFAALCQKNSLKNVD  F I CLEEV ++VRS
Sbjct: 301 TLQPFPEVDFVDFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDSGFAIPCLEEVVITVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLESL+KYGKNLK +VIKIL+MKSSHSSADDFFDEIC+FRY NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESLLKYGKNLKAIVIKILQMKSSHSSADDFFDEICRFRYMNRKIVRIE 419

[Close]

BLAST of CmoCh19G003290 vs. TrEMBL
Match: W9RME1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024200 PE=4 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 1.9e-190
Identity = 325/419 (77.57%), Postives = 367/419 (87.59%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QYVLSHM+NARDVAVCNCVSKRWK S P+I+SLYFPRNSFDNH G  + D 
Sbjct: 1   MDSLPDAIVQYVLSHMNNARDVAVCNCVSKRWKDSMPFIRSLYFPRNSFDNHVGSDNSDE 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           IIWR++SSI  LEELVVYSPFSGAGL+SWLS  G SLR LELRMDNL + Q  ++  SKL
Sbjct: 61  IIWRMVSSIEKLEELVVYSPFSGAGLSSWLSIAGSSLRHLELRMDNLTEQQGYREIPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+ +A NLESLKLWGVLMT SP WD FQ L+NLEIVGA+L+DPAL+  L ACPNL+NLL
Sbjct: 121 DCINAAKNLESLKLWGVLMTQSPNWDGFQNLQNLEIVGARLEDPALSVLLHACPNLTNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEG+ S+SI+L HLEQCKLDFYG+GNC+  +NSP I++LEVQGCSWIR   T +LRS
Sbjct: 181 LLGCEGVRSISIDLPHLEQCKLDFYGVGNCTFSMNSPKIKVLEVQGCSWIRVRETKNLRS 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NNAGRVYMVDF +LV+LE LSIRGVQWCWDAI  ML+  SEVKHLYMKVEFTGDF+
Sbjct: 241 LSIANNAGRVYMVDFVKLVALEFLSIRGVQWCWDAICSMLQWASEVKHLYMKVEFTGDFE 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           AL+PFPEID  +FFN+HPKLQKFDIHGAMFAALCQK+SLKNVD  FVI CLEEV V+VRS
Sbjct: 301 ALQPFPEIDLADFFNSHPKLQKFDIHGAMFAALCQKSSLKNVDKGFVIPCLEEVVVTVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLES +KYGKNLKTMVIKIL+MKS+HSSADDFFDEIC+FRY NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESFLKYGKNLKTMVIKILQMKSNHSSADDFFDEICRFRYVNRKIVRIE 419

[Close]

BLAST of CmoCh19G003290 vs. TAIR10
Match: AT1G10780.1 (AT1G10780.1 F-box/RNI-like superfamily protein)

HSP 1 Score: 559.3 bits (1440), Expect = 2.0e-159
Identity = 276/419 (65.87%), Postives = 332/419 (79.24%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QY+LS++++ARDVA CNCVSKRWK ST  +KS+ F RNSF++       D 
Sbjct: 1   MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESIMETDDSDS 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+ ++ISS   LEELVVYSPF+ +GLASW+  V  SLR LELRMDNL   +   +   KL
Sbjct: 61  IVRKMISSSRRLEELVVYSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVVVEGPLKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+  A NLE LKLWGVLM   P+WD+F  LR+LEIVGAK+DD +L+ ALRACPNLSNLL
Sbjct: 121 DCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LL CEG+ S+SI+L +LE CKLDFYG GN  L++ S  +  L+VQGCSWIR   T  L++
Sbjct: 181 LLACEGVKSISIDLPYLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCSWIRVPETKFLKN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSIS+  GRVYMVDF+ L SLE+LSIRGVQWCWDAI  +L+   +VKHL+MKVEFTG+ +
Sbjct: 241 LSISSVTGRVYMVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTGN-E 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           AL+PFPEIDFVEFFNNHPKLQ FDIHGAMFAALCQKNSLK ++  F I CLEEV ++VRS
Sbjct: 301 ALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLESL+KY + LK MVI+ILRMKS+HSSADDF D+ICKFR+ N  +V IE
Sbjct: 361 PLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418

[Close]

BLAST of CmoCh19G003290 vs. NCBI nr
Match: gi|778716251|ref|XP_011657525.1| (PREDICTED: F-box protein At1g10780 [Cucumis sativus])

HSP 1 Score: 755.4 bits (1949), Expect = 5.4e-215
Identity = 366/419 (87.35%), Postives = 394/419 (94.03%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI Q +LSHMSNARDVAVCNCVSKRWK STPYI+SLYFPRNSFDNHSGGLSPDI
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDI 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           IIWRIISSIVHLEELVVYSPF+GAGLASWLSSVGP+LR LELRMDNLVDLQACQ+S SKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLASWLSSVGPTLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           ECLKSAANLE+LKLWGVLMTHSPRWDVFQKL+NLEIVGAK +DPALNTAL ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LL CEGL+SVSIELK LEQCKLDFYGLGNCSL+IN+P +QLLEVQGCSWIRA GTSSLR+
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTSSLRN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NN GRVYMVDFD+L SLE LS+RG+QWCW+AISK+LE GSEVKHLYMKVEFTGD+D
Sbjct: 241 LSIANNHGRVYMVDFDKLASLEVLSLRGIQWCWNAISKILECGSEVKHLYMKVEFTGDYD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQK+SLK+VDPDF ISCLEEV V+VRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLES  KY KNLK +VI ILRMKSSH SADDFFD+ICKF++ + KIVRIE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFKHCHPKIVRIE 419

[Close]

BLAST of CmoCh19G003290 vs. NCBI nr
Match: gi|659097076|ref|XP_008449428.1| (PREDICTED: F-box protein At1g10780 [Cucumis melo])

HSP 1 Score: 755.0 bits (1948), Expect = 7.1e-215
Identity = 366/419 (87.35%), Postives = 394/419 (94.03%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI Q +LSHMSNARDVAVCNCVSKRWK STPYI+SLYFPRNSFDNHSGGLSPD 
Sbjct: 1   MDSLPDAIVQCILSHMSNARDVAVCNCVSKRWKDSTPYIRSLYFPRNSFDNHSGGLSPDN 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           IIWRIISSIVHLEELVVYSPF+GAGL+SWLSSVGPSLR LELRMDNLVDLQACQ+S SKL
Sbjct: 61  IIWRIISSIVHLEELVVYSPFTGAGLSSWLSSVGPSLRHLELRMDNLVDLQACQESPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           ECLKSAANLE+LKLWGVLMTHSPRWDVFQKL+NLEIVGAK +DPALNTAL ACPNLSNLL
Sbjct: 121 ECLKSAANLETLKLWGVLMTHSPRWDVFQKLKNLEIVGAKFEDPALNTALHACPNLSNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LL CEGL+SVSIELK LEQCKLDFYGLGNCSL+IN+P +QLLEVQGCSWIRA GT+SLR+
Sbjct: 181 LLACEGLSSVSIELKLLEQCKLDFYGLGNCSLLINAPKLQLLEVQGCSWIRARGTTSLRN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSI+NN GRVYMVDFD+LVSLE+LS+RG+QWCW AIS++LE GSEVKHLYMKVEFTGDFD
Sbjct: 241 LSIANNHGRVYMVDFDKLVSLETLSLRGIQWCWSAISRILECGSEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQK+SLK+VDPDF ISCLEEV V+VRS
Sbjct: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKHSLKSVDPDFAISCLEEVWVTVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKMNTLES  KY KNLK +VI ILRMKSSH SADDFFD+ICKFR+ + KIVRIE
Sbjct: 361 PLNAEQKMNTLESFTKYAKNLKALVINILRMKSSHGSADDFFDDICKFRHCHPKIVRIE 419

[Close]

BLAST of CmoCh19G003290 vs. NCBI nr
Match: gi|567878663|ref|XP_006431890.1| (hypothetical protein CICLE_v10001293mg [Citrus clementina])

HSP 1 Score: 682.2 bits (1759), Expect = 5.8e-193
Identity = 332/419 (79.24%), Postives = 368/419 (87.83%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QYVLSHM NARDVAVCNCVSKRWK S PY+KSLYFPRNSFDN S   SPD 
Sbjct: 1   MDSLPDAIVQYVLSHMKNARDVAVCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDD 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+ ++I SIV LEELVVY+PFS AGL SWL   G +L+ LELRMDNL D Q C ++ SKL
Sbjct: 61  IVLKMIYSIVCLEELVVYTPFSKAGLDSWLMLAGSTLKHLELRMDNLADYQGCLENPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+  A NLESLKLWGVLM  SP+WDVF KL+NLEIVGA+L+DPAL+TALRACPNL+NLL
Sbjct: 121 DCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLEDPALSTALRACPNLTNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEG+ SVSIEL HLEQCKLDFYGLGNCSL ++ P IQ LEVQGCSWIR   T+ LR+
Sbjct: 181 LLGCEGVRSVSIELPHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQGCSWIRVQETNCLRN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSISNNAGRVYMVDF +LV+LESL++RGVQWCWDAISKML   SEVKHLYMKVEFTGDFD
Sbjct: 241 LSISNNAGRVYMVDFGKLVALESLTLRGVQWCWDAISKMLYWASEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
            L+PFPE+DFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNV+  FVI CLEEV V+VRS
Sbjct: 301 TLQPFPEVDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVESGFVIPCLEEVVVTVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLESL+KYGKNLKTMVI+IL+MKSSHSS+DDFFDEIC+FR  NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESLLKYGKNLKTMVIRILQMKSSHSSSDDFFDEICRFRCMNRKIVRIE 419

[Close]

BLAST of CmoCh19G003290 vs. NCBI nr
Match: gi|1009150280|ref|XP_015892936.1| (PREDICTED: F-box protein At1g10780-like [Ziziphus jujuba])

HSP 1 Score: 679.5 bits (1752), Expect = 3.8e-192
Identity = 325/419 (77.57%), Postives = 368/419 (87.83%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDS+PDAI QY+LSH++NARDVAVCNCVSKRWK S PYI+SLYFPRNSFDNHSG  SPD 
Sbjct: 1   MDSIPDAIVQYILSHINNARDVAVCNCVSKRWKDSLPYIRSLYFPRNSFDNHSGRDSPDE 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           ++WR++S I  LEELVVYSPFSGAGLASWLS  G SL  LELRMDNL + QAC +S SKL
Sbjct: 61  VVWRMVSRISRLEELVVYSPFSGAGLASWLSLTGSSLLHLELRMDNLTEQQACNESTSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+ +A NL+SLKLWGVLMT SP+W+ F++LRNLEIVGA+L+D AL+T L ACPNL+NLL
Sbjct: 121 DCISAANNLQSLKLWGVLMTRSPQWEAFKELRNLEIVGARLEDSALSTVLHACPNLTNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEG+ SVSI+L HLE CKLDFYGLGNCS  + SP IQ+LEVQGCSWIR   T+ LR 
Sbjct: 181 LLGCEGVRSVSIDLPHLENCKLDFYGLGNCSFSMKSPKIQVLEVQGCSWIRVRETNCLRC 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSISNNAGRVYMVD  +L++LE LSIRGVQWCWDAIS ML+  SEVKHLYMKVEFTGDF+
Sbjct: 241 LSISNNAGRVYMVDCGKLMALEFLSIRGVQWCWDAISNMLQWASEVKHLYMKVEFTGDFE 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
           AL+PFPEIDFV+FFN+HPKLQKFDIHGAMFAALCQKNSLKNV+  F I CLEEV ++VRS
Sbjct: 301 ALQPFPEIDFVDFFNSHPKLQKFDIHGAMFAALCQKNSLKNVETGFTIPCLEEVIITVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLES +KYGKNLK MVIKIL+MKSSHSSADDFFDEIC+FRY NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESFLKYGKNLKAMVIKILQMKSSHSSADDFFDEICRFRYMNRKIVRIE 419

[Close]

BLAST of CmoCh19G003290 vs. NCBI nr
Match: gi|568833840|ref|XP_006471074.1| (PREDICTED: F-box protein At1g10780 [Citrus sinensis])

HSP 1 Score: 679.1 bits (1751), Expect = 4.9e-192
Identity = 329/419 (78.52%), Postives = 367/419 (87.59%), Query Frame = 1


Query: 1   MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDI 60
           MDSLPDAI QY+LSHM NARDVA+CNCVSKRWK S PY+KSLYFPRNSFDN S   SPD 
Sbjct: 1   MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDD 60

Query: 61  IIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDLQACQDSHSKL 120
           I+ ++I SIV LEELVVY+PFS AGL SWL   G +L+ LELRMDNL D Q C ++ SKL
Sbjct: 61  IVLKMIYSIVCLEELVVYTPFSKAGLDSWLMLAGSTLKHLELRMDNLADYQGCLENPSKL 120

Query: 121 ECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLL 180
           +C+  A NLESLKLWGVLM  SP+WDVF KL+NLEIVGA+L+DPAL+TALRACPNL+NLL
Sbjct: 121 DCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLEDPALSTALRACPNLTNLL 180

Query: 181 LLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRS 240
           LLGCEG+ SVSIEL HLEQCKLDFYGLGNCSL ++ P IQ LEVQGCSWIR   T+ LR+
Sbjct: 181 LLGCEGVRSVSIELPHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQGCSWIRVQETNCLRN 240

Query: 241 LSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD 300
           LSISNNAGRVYMVDF +L +LESL++RGVQWCWDAISKML   SEVKHLYMKVEFTGDFD
Sbjct: 241 LSISNNAGRVYMVDFGKLAALESLTLRGVQWCWDAISKMLYWASEVKHLYMKVEFTGDFD 300

Query: 301 ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRS 360
            L+PFPE+DFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNV+  FVI CLEEV V+VRS
Sbjct: 301 TLQPFPEVDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVESGFVIPCLEEVVVTVRS 360

Query: 361 PLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE 420
           PLNAEQKM+TLESL+KYGKNLKTMVI+IL+MKSSHSS+DDFFDEIC+FR  NRKIVRIE
Sbjct: 361 PLNAEQKMSTLESLLKYGKNLKTMVIRILQMKSSHSSSDDFFDEICRFRCMNRKIVRIE 419

The following BLAST results are available for this feature:

BLAST of CmoCh19G003290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB2_ARATH	3.6e-158	65.87	F-box protein At1g10780 OS=Arabidopsis thaliana GN=At1g10780 PE=2 SV=1	[more]

BLAST of CmoCh19G003290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGD4_CUCSA	3.8e-215	87.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411180 PE=4 SV=1	[more]
V4T1B3_9ROSI	4.1e-193	79.24	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001293mg PE=4 SV=1	[more]
A0A067DJS4_CITSI	3.4e-192	78.52	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014774mg PE=4 SV=1	[more]
M5XCY6_PRUPE	8.5e-191	77.57	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006287mg PE=4 SV=1	[more]
W9RME1_9ROSA	1.9e-190	77.57	Uncharacterized protein OS=Morus notabilis GN=L484_024200 PE=4 SV=1	[more]

BLAST of CmoCh19G003290 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10780.1	2.0e-159	65.87	F-box/RNI-like superfamily protein	[more]

BLAST of CmoCh19G003290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778716251\|ref\|XP_011657525.1\|	5.4e-215	87.35	PREDICTED: F-box protein At1g10780 [Cucumis sativus]	[more]
gi\|659097076\|ref\|XP_008449428.1\|	7.1e-215	87.35	PREDICTED: F-box protein At1g10780 [Cucumis melo]	[more]
gi\|567878663\|ref\|XP_006431890.1\|	5.8e-193	79.24	hypothetical protein CICLE_v10001293mg [Citrus clementina]	[more]
gi\|1009150280\|ref\|XP_015892936.1\|	3.8e-192	77.57	PREDICTED: F-box protein At1g10780-like [Ziziphus jujuba]	[more]
gi\|568833840\|ref\|XP_006471074.1\|	4.9e-192	78.52	PREDICTED: F-box protein At1g10780 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008283	cell proliferation
biological_process	GO:0006270	DNA replication initiation
biological_process	GO:0016572	histone phosphorylation
biological_process	GO:0006275	regulation of DNA replication
biological_process	GO:0010389	regulation of G2/M transition of mitotic cell cycle
biological_process	GO:0008150	biological_process
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G003290.1	CmoCh19G003290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 2..34 score: 4.0
None	No IPR available	PANTHER	PTHR32212	FAMILY NOT NAMED	coord: 1..419 score: 8.9E
None	No IPR available	PANTHER	PTHR32212:SF82	SUBFAMILY NOT NAMED	coord: 1..419 score: 8.9E
None	No IPR available	unknown	SSF52047	RNI-like	coord: 64..296 score: 1.65

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G003290	CmaCh11G015950	Cucurbita maxima (Rimu)	cmacmoB147
CmoCh19G003290	CmaCh19G003030	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G003290	ClCG09G014240	Watermelon (Charleston Gray)	cmowcgB452
CmoCh19G003290	Lsi03G008720	Bottle gourd (USVL1VR-Ls)	cmolsiB466
CmoCh19G003290	Cp4.1LG04g06710	Cucurbita pepo (Zucchini)	cmocpeB493
CmoCh19G003290	Cp4.1LG15g02710	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G003290	Cla97C09G176660	Watermelon (97103) v2	cmowmbB539
CmoCh19G003290	Bhi05G000565	Wax gourd	cmowgoB0656
CmoCh19G003290	Carg24602	Silver-seed gourd	carcmoB0890
CmoCh19G003290	Carg24013	Silver-seed gourd	carcmoB1001

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh19G003290	CmoCh11G015280	Cucurbita moschata (Rifu)	cmocmoB109

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G003290	Cucumber (Gy14) v1	cgycmoB0528
CmoCh19G003290	Wild cucumber (PI 183967)	cmocpiB522
CmoCh19G003290	Cucumber (Chinese Long) v2	cmocuB515
CmoCh19G003290	Melon (DHL92) v3.5.1	cmomeB470
CmoCh19G003290	Watermelon (Charleston Gray)	cmowcgB444
CmoCh19G003290	Cucumber (Gy14) v2	cgybcmoB764
CmoCh19G003290	Melon (DHL92) v3.6.1	cmomedB542
CmoCh19G003290	Cucumber (Chinese Long) v3	cmocucB0619
CmoCh19G003290	Watermelon (97103) v2	cmowmbB532