Carg23983 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23983
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	chaperone protein dnaJ 20, chloroplastic-like
Location	Cucurbita_argyrosperma_scaffold_129 : 15825 .. 16304 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTCTTCACCAAATCCTTCCCTCCGAGCAGCTTTTTGCAGCCCTATAAGCTCCCAAAACAAGACCACCCGACCGGTGATGAGCGTGTCCTGTAAAGGGACGGATTACTACACGTTGCTTTCGGTGAGTGATGGATGTCATGCGAGCAACGAAGACATCAAGAAGGCTTATAGAGCCAAGGCTTTGCAGTATCATCCTGACCTTGTTTGTGATCCTTCCCTCAAAGACAAGTGTACGAGGATGTTTGTTCAGCTCAATGCAGCCTATAAGACACTCTCTGATCCTGTTCTTAGAAGAGAGTATGATGATTCTTTGATGGGTTTGAAGGGCAATCATCATGGCACATATACAGGATTTAAAGGGGATTATAGAGACCTGTGGCAAAGGCAGATTCTCGAGCTCAATCGCCGGTCGAATCTTCGGAGGAATTGGTCGTTGTCGTCTTGGGGTGGGAGAATGCGAGCTCAAAATCGTTGA

mRNA sequence

ATGTTTTCTTCACCAAATCCTTCCCTCCGAGCAGCTTTTTGCAGCCCTATAAGCTCCCAAAACAAGACCACCCGACCGGTGATGAGCGTGTCCTGTAAAGGGACGGATTACTACACGTTGCTTTCGGTGAGTGATGGATGTCATGCGAGCAACGAAGACATCAAGAAGGCTTATAGAGCCAAGGCTTTGCAGTATCATCCTGACCTTGTTTGTGATCCTTCCCTCAAAGACAAGTGTACGAGGATGTTTGTTCAGCTCAATGCAGCCTATAAGACACTCTCTGATCCTGTTCTTAGAAGAGAGTATGATGATTCTTTGATGGGTTTGAAGGGCAATCATCATGGCACATATACAGGATTTAAAGGGGATTATAGAGACCTGTGGCAAAGGCAGATTCTCGAGCTCAATCGCCGGTCGAATCTTCGGAGGAATTGGTCGTTGTCGTCTTGGGGTGGGAGAATGCGAGCTCAAAATCGTTGA

Coding sequence (CDS)

ATGTTTTCTTCACCAAATCCTTCCCTCCGAGCAGCTTTTTGCAGCCCTATAAGCTCCCAAAACAAGACCACCCGACCGGTGATGAGCGTGTCCTGTAAAGGGACGGATTACTACACGTTGCTTTCGGTGAGTGATGGATGTCATGCGAGCAACGAAGACATCAAGAAGGCTTATAGAGCCAAGGCTTTGCAGTATCATCCTGACCTTGTTTGTGATCCTTCCCTCAAAGACAAGTGTACGAGGATGTTTGTTCAGCTCAATGCAGCCTATAAGACACTCTCTGATCCTGTTCTTAGAAGAGAGTATGATGATTCTTTGATGGGTTTGAAGGGCAATCATCATGGCACATATACAGGATTTAAAGGGGATTATAGAGACCTGTGGCAAAGGCAGATTCTCGAGCTCAATCGCCGGTCGAATCTTCGGAGGAATTGGTCGTTGTCGTCTTGGGGTGGGAGAATGCGAGCTCAAAATCGTTGA

Protein sequence

MFSSPNPSLRAAFCSPISSQNKTTRPVMSVSCKGTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTYTGFKGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQNR

Homology

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BLAST of Carg23983 vs. NCBI nr
Match: XP_022927706.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 327.4 bits (838), Expect = 2.7e-86
Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MFSSPNPSLRAAFCSPISSQNKTTRPVMSVSCKGTDYYTLLSVSDGCHASNEDIKKAYRA 60
           MFSSPNPSLRAAFCSPISS+NKTTRPVMSVSCKGTDYYTLLSVSDGCHASNEDIKKAYRA
Sbjct: 1   MFSSPNPSLRAAFCSPISSRNKTTRPVMSVSCKGTDYYTLLSVSDGCHASNEDIKKAYRA 60

Query: 61  KALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTYTGF 120
           KALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGT TGF
Sbjct: 61  KALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTSTGF 120

Query: 121 KGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQNR 160
           KGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQNR
Sbjct: 121 KGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQNR 159

[Close]

BLAST of Carg23983 vs. NCBI nr
Match: XP_023530181.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.2 bits (827), Expect = 5.1e-85
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MFSSPNPSLRAAFCSPISSQNKTTRPVMSVSCKGTDYYTLLSVSDGCHASNEDIKKAYRA 60
           MFSSPNPSLRAAFCSP+SS+NKT RPVMS+SCKGTDYYTLLSVSDGCHASNEDIKKAYRA
Sbjct: 1   MFSSPNPSLRAAFCSPLSSRNKTIRPVMSMSCKGTDYYTLLSVSDGCHASNEDIKKAYRA 60

Query: 61  KALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTYTGF 120
           KALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGT TGF
Sbjct: 61  KALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTSTGF 120

Query: 121 KGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQNR 160
           KGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQNR
Sbjct: 121 KGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQNR 159

[Close]

BLAST of Carg23983 vs. NCBI nr
Match: XP_022989514.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 321.6 bits (823), Expect = 1.5e-84
Identity = 153/159 (96.23%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MFSSPNPSLRAAFCSPISSQNKTTRPVMSVSCKGTDYYTLLSVSDGCHASNEDIKKAYRA 60
           MFS PNPSLRA FCSP+SSQNKTTRPVMSVSCKGTDYYTLLSVSDGCHASNEDIKKAYR 
Sbjct: 1   MFSPPNPSLRAGFCSPLSSQNKTTRPVMSVSCKGTDYYTLLSVSDGCHASNEDIKKAYRT 60

Query: 61  KALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTYTGF 120
           KALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGT TGF
Sbjct: 61  KALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTSTGF 120

Query: 121 KGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQNR 160
           KGDYRDLWQRQILELN+RSNLRRNWSLSSWGGRMRAQNR
Sbjct: 121 KGDYRDLWQRQILELNQRSNLRRNWSLSSWGGRMRAQNR 159

[Close]

BLAST of Carg23983 vs. NCBI nr
Match: XP_022967659.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 180.6 bits (457), Expect = 4.1e-42
Identity = 93/140 (66.43%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 24  TRPVMSVSC-----KGTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDK 83
           TRP++ +SC     KG DYY LLSVS GC+AS E+IK+AYRA ALQYHPDLVCDP LK++
Sbjct: 6   TRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQ 65

Query: 84  CTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTYTGFKGDYRDLWQRQILELNRR 143
            T+MFVQLNAAYKTLSDPVLRR+YDDS+MGL   +     GF+ D R +WQRQILEL RR
Sbjct: 66  STKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERRGFEVD-RTVWQRQILELKRR 125

Query: 144 SNLRRNWSLSSWGGRMRAQN 159
           S  +R+ S+ SWGGRMRA+N
Sbjct: 126 SACQRDRSV-SWGGRMRARN 143

[Close]

BLAST of Carg23983 vs. NCBI nr
Match: XP_022963776.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata] >XP_023511548.1 chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.3 bits (456), Expect = 5.3e-42
Identity = 93/140 (66.43%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 24  TRPVMSVSC-----KGTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDK 83
           TRP++ +SC     KG DYY LLSVS GC+AS E+IK+AYRA ALQYHPDLVCDP LK++
Sbjct: 6   TRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQ 65

Query: 84  CTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTYTGFKGDYRDLWQRQILELNRR 143
            T+MFVQLNAAYKTLSDPVLRR+YDDS+MGL   +     GF+ D R +WQRQILEL RR
Sbjct: 66  STKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERGGFEVD-RTVWQRQILELKRR 125

Query: 144 SNLRRNWSLSSWGGRMRAQN 159
           S  +R+ S+ SWGGRMRA+N
Sbjct: 126 SACQRDRSV-SWGGRMRARN 143

[Close]

BLAST of Carg23983 vs. TAIR10
Match: AT4G13830.2 (DNAJ-like 20)

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12
Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 37  YYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDP 96
           +Y LL V++    +  +IK+AY+  A +YHPD V  P   ++ T  F+++  AY+TLSDP
Sbjct: 67  FYDLLGVTES--VTLPEIKQAYKQLARKYHPD-VSPPDRVEEYTDRFIRVQEAYETLSDP 126

Query: 97  VLRREYDDSL-----MGLKGNHHGTY----TGFKGDYRDLWQRQILELNRRSNLRRNWSL 156
             R  YD  L         G     Y       K +++  WQ Q+  L RRSN + N + 
Sbjct: 127 RRRVLYDRDLSMGFSFSFSGRRQNRYDQEVVEEKSEWKAKWQTQLSGLRRRSNQKDN-NT 186

Query: 157 SSWGGRMRAQNR 160
            SW  RMR Q +
Sbjct: 187 MSWAARMRRQQQ 194

[Close]

BLAST of Carg23983 vs. TAIR10
Match: AT2G20560.1 (DNAJ heat shock family protein)

HSP 1 Score: 65.1 bits (157), Expect = 4.5e-11
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G DYY +L V     AS++D+KKAYR  A+++HPD   +P+ K     MF Q++ AY+ L
Sbjct: 2   GVDYYKVLQVDRS--ASDDDLKKAYRKLAMKWHPDK--NPNNKKDAEAMFKQISEAYEVL 61

Query: 94  SDPVLRREYDD-SLMGLKGN 113
           SDP  +  YD     GLKGN
Sbjct: 62  SDPQKKAVYDQYGEEGLKGN 77

[Close]

BLAST of Carg23983 vs. TAIR10
Match: AT2G35720.1 (DNAJ heat shock N-terminal domain-containing protein)

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10
Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 36  DYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSD 95
           + Y LL++S    AS+E+I+KAYR  A  YHPD +  P +K+  T  F ++  AY+ LSD
Sbjct: 15  ELYALLNLSP--EASDEEIRKAYRQWAQVYHPDKIQSPQMKEVATENFQRICEAYEILSD 74

Query: 96  PVLRREYDDSLMGLKGNHHGTYTGFKGDYRDLWQRQILELNRRS 140
              R  YD  L G++G + G   G +    D  + ++  + RR+
Sbjct: 75  ETKRLIYD--LYGMEGLNSGLELGPRLSKADEIKEELERIKRRN 114

[Close]

BLAST of Carg23983 vs. TAIR10
Match: AT4G28480.1 (DNAJ heat shock family protein)

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-10
Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G DYY +L V     A+++D+KKAYR  A+++HPD   +P+ K      F Q++ AY  L
Sbjct: 2   GVDYYKVLQVDRS--ANDDDLKKAYRKLAMKWHPDK--NPNNKKDAEAKFKQISEAYDVL 61

Query: 94  SDPVLRREYDD-SLMGLKGN 113
           SDP  R  YD     GLKGN
Sbjct: 62  SDPQKRAVYDQYGEEGLKGN 77

[Close]

BLAST of Carg23983 vs. TAIR10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 58.5 bits (140), Expect = 4.2e-09
Identity = 38/103 (36.89%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 20  QNKTTRPVMSVSCKGTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKC 79
           +N+  R ++  +  G DYY  L VS    A+N++IK AYR  A QYHPD+  +P   +K 
Sbjct: 60  RNRRGRSLVVFATSG-DYYATLGVSKS--ANNKEIKAAYRRLARQYHPDVNKEPGATEK- 119

Query: 80  TRMFVQLNAAYKTLSDPVLRREYDD----SLMGLKGNHHGTYT 119
              F +++AAY+ LSD   R  YD      +    G   G YT
Sbjct: 120 ---FKEISAAYEVLSDEQKRALYDQYGEAGVKSTVGGASGPYT 155

[Close]

BLAST of Carg23983 vs. Swiss-Prot
Match: sp|B5YAR4|DNAJ_DICT6 (Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-11
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 36  DYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSD 95
           DYY +L V    +A+ ++IK+AYR    QYHPDL  DPS  +K    F ++N AY+ LSD
Sbjct: 6   DYYEILGVPR--NATQDEIKQAYRRLVRQYHPDLNKDPSAHEK----FKEINEAYEVLSD 65

Query: 96  PVLRREYDDSLMGLKGNHHGTYTGFKGDYRDLWQ 130
           P  R +YD      +  H G ++G+ GD++  WQ
Sbjct: 66  PQKRAQYD------QFGHVGDFSGY-GDFQGGWQ 86

[Close]

BLAST of Carg23983 vs. Swiss-Prot
Match: sp|Q9SDN0|DNJ20_ARATH (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 7.4e-11
Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 37  YYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDP 96
           +Y LL V++    +  +IK+AY+  A +YHPD V  P   ++ T  F+++  AY+TLSDP
Sbjct: 67  FYDLLGVTES--VTLPEIKQAYKQLARKYHPD-VSPPDRVEEYTDRFIRVQEAYETLSDP 126

Query: 97  VLRREYDDSL-----MGLKGNHHGTY----TGFKGDYRDLWQRQILELNRRSNLRRNWSL 156
             R  YD  L         G     Y       K +++  WQ Q+  L RRSN + N + 
Sbjct: 127 RRRVLYDRDLSMGFSFSFSGRRQNRYDQEVVEEKSEWKAKWQTQLSGLRRRSNQKDN-NT 186

Query: 157 SSWGGRMRAQNR 160
            SW  RMR Q +
Sbjct: 187 MSWAARMRRQQQ 194

[Close]

BLAST of Carg23983 vs. Swiss-Prot
Match: sp|Q9UDY4|DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens OX=9606 GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.4e-11
Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G DYY +L +  G  AS+EDIKKAYR +AL++HPD    P  ++K    F ++  AY+ L
Sbjct: 2   GKDYYCILGIEKG--ASDEDIKKAYRKQALKFHPDKNKSPQAEEK----FKEVAEAYEVL 61

Query: 94  SDPVLRREYDD-SLMGLKGNHHGTYTGFKGDYR 126
           SDP  R  YD     GLKG   GT  G  G +R
Sbjct: 62  SDPKKREIYDQFGEEGLKGGAGGT-DGQGGTFR 87

[Close]

BLAST of Carg23983 vs. Swiss-Prot
Match: sp|Q5R8J8|DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii OX=9601 GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.4e-11
Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G DYY +L +  G  AS+EDIKKAYR +AL++HPD    P  ++K    F ++  AY+ L
Sbjct: 2   GKDYYCILGIEKG--ASDEDIKKAYRKQALKFHPDKNKSPQAEEK----FKEVAEAYEVL 61

Query: 94  SDPVLRREYDD-SLMGLKGNHHGTYTGFKGDYR 126
           SDP  R  YD     GLKG   GT  G  G +R
Sbjct: 62  SDPKKREIYDQFGEEGLKGGAGGT-DGQGGTFR 87

[Close]

BLAST of Carg23983 vs. Swiss-Prot
Match: sp|Q2KIT4|DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus OX=9913 GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G DYY +L +  G  AS+EDIKKAYR +AL++HPD    P  +++    F ++  AY+ L
Sbjct: 2   GKDYYCILGIEKG--ASDEDIKKAYRKQALRFHPDKNKSPQAEER----FKEVAEAYEVL 61

Query: 94  SDPVLRREYDD-SLMGLKGNHHGTYTGFKGDYR 126
           SDP  R  YD     GLKG   GT  G  G +R
Sbjct: 62  SDPKKREIYDQFGEEGLKGGAGGT-DGQGGTFR 87

[Close]

BLAST of Carg23983 vs. TrEMBL
Match: tr|A0A1S3C0P6|A0A1S3C0P6_CUCME (chaperone protein dnaJ 20, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495683 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-39
Identity = 99/168 (58.93%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MFSSPNPSLRAAFCSPISSQN-KTTRPVMSVSCKGT-------DYYTLLSVSDGCHASNE 60
           MF+SPN SL  +F S  +  + + +R    VSCK         +YY LLSVS GC+AS E
Sbjct: 1   MFASPN-SLSLSFPSKATPPSFQASRGRCCVSCKAAASTKERDNYYKLLSVSGGCNASPE 60

Query: 61  DIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGN 120
           +IKKAYRA AL+YHPDLVCDPSLK++ TRMFVQLNAAYKTLSDPVLRR+YDDSLMG    
Sbjct: 61  EIKKAYRAMALRYHPDLVCDPSLKEQSTRMFVQLNAAYKTLSDPVLRRQYDDSLMGFNTK 120

Query: 121 HHGTYTGFKGDYRDLWQRQILELNRRSNLRRNWSL-SSWGGRMRAQNR 160
                  F+GD   +WQRQILEL RRS+LR++ S  +SW  RM+AQ+R
Sbjct: 121 R------FQGDSAAVWQRQILELKRRSSLRKDRSAPASWAARMQAQSR 161

[Close]

BLAST of Carg23983 vs. TrEMBL
Match: tr|A0A0A0K7A4|A0A0A0K7A4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G061190 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36
Identity = 97/170 (57.06%), Postives = 117/170 (68.82%), Query Frame = 0


Query: 1   MFSSPN---PSLRAAFCSPIS--SQNKTTRPVMSVSCKGT-----DYYTLLSVSDGCHAS 60
           MF+SPN    SL  +F S  +  S    +R    VSCK +     DYY LLSVS GC+AS
Sbjct: 1   MFASPNSSSTSLSLSFLSKTTPPSHQAASRGRFCVSCKASATRERDYYKLLSVSGGCNAS 60

Query: 61  NEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLK 120
            E+IKKAYRA AL+YHPDLVCDP LK++ TRMFVQLNAAYKTLSDPVLRR+YDDSL    
Sbjct: 61  PEEIKKAYRAMALRYHPDLVCDPLLKEQSTRMFVQLNAAYKTLSDPVLRRQYDDSL---- 120

Query: 121 GNHHGTYTGFKGDYRDLWQRQILELNRRSNLRRNWSL-SSWGGRMRAQNR 160
            N      GF+GD   +W+RQILEL RRS+ R++ S  +SW  RM+A +R
Sbjct: 121 -NMGFNTKGFRGD-SAVWERQILELKRRSSQRKDRSAPASWAARMQAHSR 164

[Close]

BLAST of Carg23983 vs. TrEMBL
Match: tr|A0A1S2YH87|A0A1S2YH87_CICAR (chaperone protein dnaJ 20, chloroplastic-like OS=Cicer arietinum OX=3827 GN=LOC101490309 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-25
Identity = 72/153 (47.06%), Postives = 95/153 (62.09%), Query Frame = 0


Query: 21  NKTTRPV---MSVSCK------------GTDYYTLLSVSDGCHASNEDIKKAYRAKALQY 80
           NK  RP     ++SCK            G+++Y +LSV+   +A+ E+IKKAYR+ ALQY
Sbjct: 26  NKQQRPCEVHFTISCKATKLKNMEETKHGSNFYKMLSVNPK-NATMEEIKKAYRSMALQY 85

Query: 81  HPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTYTGFKGDYR 140
           HPD+  DP++K++ TRMFVQLN AYKTLS+P+LR +YD  L GLK N        +  +R
Sbjct: 86  HPDVCHDPNMKEESTRMFVQLNVAYKTLSNPMLREQYDSEL-GLKNNMVINNIVSEEMWR 145

Query: 141 DLWQRQILELNRRSNLRRNWSLSSWGGRMRAQN 159
             WQ QI+EL +RS  R      SWG RMR QN
Sbjct: 146 SRWQEQIVELKKRSRRRMEQKEGSWGSRMRTQN 176

[Close]

BLAST of Carg23983 vs. TrEMBL
Match: tr|A0A2P4L1P1|A0A2P4L1P1_QUESU (Chaperone protein dnaj 20, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_72281 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.4e-24
Identity = 74/151 (49.01%), Postives = 97/151 (64.24%), Query Frame = 0


Query: 22  KTTRP---VMSVSCK----------GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPD 81
           K  RP   V SVSC+           T++Y LLS+S   +A+  ++KKAYR+KAL+YHPD
Sbjct: 23  KQQRPRVLVNSVSCRATKVIGSENNSTNFYELLSLSPN-NANINEVKKAYRSKALRYHPD 82

Query: 82  LVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTYTGFKGDY-RDL 141
             C PS+K++ TRMFV+LNAAYKTLSDP+LR+EYD  L+G + N++G+      D+ R  
Sbjct: 83  -ACPPSMKEESTRMFVELNAAYKTLSDPMLRKEYDCELLGPR-NNYGSRLKMDVDFARTR 142

Query: 142 WQRQILELNRRSNLRRNWSLSSWGGRMRAQN 159
           WQ QI  L  RSN R      S G R+RAQN
Sbjct: 143 WQEQINGLKSRSNRRMAQKEGSRGSRIRAQN 170

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BLAST of Carg23983 vs. TrEMBL
Match: tr|A0A2I4FYV8|A0A2I4FYV8_9ROSI (chaperone protein dnaJ 20, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109003233 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23
Identity = 77/168 (45.83%), Postives = 102/168 (60.71%), Query Frame = 0


Query: 3   SSPNPSLRAAFCSPISSQNKTT--RPVMSVSCK--GTDYYTLLSVSDGCHASNEDIKKAY 62
           + P P L     SPI  +   T     +SVSC+   T +Y +LS+S    AS +++KKAY
Sbjct: 13  AKPKPFL----SSPIPGKRHLTGHAQAVSVSCRATATTFYEVLSLSPD-KASIDEVKKAY 72

Query: 63  RAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTY- 122
           R  AL+YHPD VC P +K++ TRMFVQLNAAY+TLSDPVLR+EYD  ++ ++G    T+ 
Sbjct: 73  RTMALRYHPD-VCPPLMKEESTRMFVQLNAAYRTLSDPVLRKEYDCEIL-MEGFGRSTFG 132

Query: 123 -TGFKGDY------RDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQN 159
            T   G        R  W++QI+EL RRSN R      SWG R+RA N
Sbjct: 133 RTSRMGGVDHDRGTRSRWEQQIVELKRRSNCRMAEKEGSWGSRIRAHN 173

The following BLAST results are available for this feature:

BLAST of Carg23983 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927706.1	2.7e-86	98.74	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata]	[more]
XP_023530181.1	5.1e-85	96.86	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989514.1	1.5e-84	96.23	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima]	[more]
XP_022967659.1	4.1e-42	66.43	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima]	[more]
XP_022963776.1	5.3e-42	66.43	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata] >XP_023511548...	[more]

BLAST of Carg23983 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13830.2	4.1e-12	34.85	DNAJ-like 20	[more]
AT2G20560.1	4.5e-11	45.00	DNAJ heat shock family protein	[more]
AT2G35720.1	2.9e-10	35.58	DNAJ heat shock N-terminal domain-containing protein	[more]
AT4G28480.1	3.8e-10	43.75	DNAJ heat shock family protein	[more]
AT1G80030.1	4.2e-09	36.89	Molecular chaperone Hsp40/DnaJ family protein	[more]

BLAST of Carg23983 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B5YAR4\|DNAJ_DICT6	5.6e-11	41.49	Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 396...	[more]
sp\|Q9SDN0\|DNJ20_ARATH	7.4e-11	34.85	Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ2...	[more]
sp\|Q9UDY4\|DNJB4_HUMAN	7.4e-11	45.16	DnaJ homolog subfamily B member 4 OS=Homo sapiens OX=9606 GN=DNAJB4 PE=1 SV=1	[more]
sp\|Q5R8J8\|DNJB4_PONAB	7.4e-11	45.16	DnaJ homolog subfamily B member 4 OS=Pongo abelii OX=9601 GN=DNAJB4 PE=2 SV=1	[more]
sp\|Q2KIT4\|DNJB4_BOVIN	1.6e-10	44.09	DnaJ homolog subfamily B member 4 OS=Bos taurus OX=9913 GN=DNAJB4 PE=2 SV=1	[more]

BLAST of Carg23983 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0P6\|A0A1S3C0P6_CUCME	1.6e-39	58.93	chaperone protein dnaJ 20, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A0A0K7A4\|A0A0A0K7A4_CUCSA	1.7e-36	57.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G061190 PE=4 SV=1	[more]
tr\|A0A1S2YH87\|A0A1S2YH87_CICAR	1.3e-25	47.06	chaperone protein dnaJ 20, chloroplastic-like OS=Cicer arietinum OX=3827 GN=LOC1...	[more]
tr\|A0A2P4L1P1\|A0A2P4L1P1_QUESU	7.4e-24	49.01	Chaperone protein dnaj 20, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_7228...	[more]
tr\|A0A2I4FYV8\|A0A2I4FYV8_9ROSI	1.3e-23	45.83	chaperone protein dnaJ 20, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC10...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036869	J_dom_sf
IPR001623	DnaJ_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23983-RA	Carg23983-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 78..98 score: 30.93 coord: 58..73 score: 44.23 coord: 40..58 score: 32.35
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 35..98 e-value: 1.4E-17 score: 74.4
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 36..103 e-value: 3.5E-18 score: 65.4
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 36..106 score: 16.539
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 36..95 e-value: 1.30064E-16 score: 69.1113
IPR036869	Chaperone J-domain superfamily	GENE3D	G3DSA:1.10.287.110		coord: 23..125 e-value: 5.2E-23 score: 83.2
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	SSF46565	Chaperone J-domain	coord: 32..109
None	No IPR available	PANTHER	PTHR45090	FAMILY NOT NAMED	coord: 25..158

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23983	Csa7G061190	Cucumber (Chinese Long) v2	carcuB0753
Carg23983	MELO3C018658	Melon (DHL92) v3.5.1	carmeB0729
Carg23983	CSPI07G05400	Wild cucumber (PI 183967)	carcpiB0769
Carg23983	CmaCh19G002670	Cucurbita maxima (Rimu)	carcmaB1029
Carg23983	CmoCh11G014930	Cucurbita moschata (Rifu)	carcmoB1000
Carg23983	CmoCh19G002870	Cucurbita moschata (Rifu)	carcmoB1001
Carg23983	Lsi03G007760	Bottle gourd (USVL1VR-Ls)	carlsiB674
Carg23983	Cp4.1LG04g06960	Cucurbita pepo (Zucchini)	carcpeB1035
Carg23983	Cp4.1LG15g02350	Cucurbita pepo (Zucchini)	carcpeB1034
Carg23983	CsGy7G005000	Cucumber (Gy14) v2	carcgybB0731
Carg23983	MELO3C018658.2	Melon (DHL92) v3.6.1	carmedB0740
Carg23983	CsaV3_7G006340	Cucumber (Chinese Long) v3	carcucB0772
Carg23983	Bhi05G000681	Wax gourd	carwgoB0868

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23983	Carg24569	Silver-seed gourd	carcarB566

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23983	Cucurbita maxima (Rimu)	carcmaB1028