Cp4.1LG04g06960 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g06960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Chaperone protein DNAj, putative
Location	Cp4.1LG04 : 4518372 .. 4518851 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTCTTCACCAAATCCTTCGCTCCGAGCAGCTTTTTGCAGCCCTTTAAGCTCCCGAAACAAGACCATCCGACCGGTGATGAGCATGTCCTGTAAAGGGACGGATTATTACACGTTGCTCTCGGTGAGTGATGGATGTCATGCGAGCAACGAAGACATTAAGAAGGCTTATAGAGCCAAGGCTTTGCAGTATCATCCTGACCTTGTTTGTGATCCTTCCCTCAAAGACAAGTGTACGAGGATGTTTGTTCAGCTGAATGCAGCCTATAAGACACTCTCTGATCCTGTTCTTAGAAGAGAGTATGATGATTCTTTGATGGGTTTGAAAGGCAATCATCATGGCACATCTACAGGATTTAAAGGGGATTATAGAGACCTGTGGCAAAGGCAGATTCTCGAGCTCAATCGGCGGTCGAATCTTCGGAGGAATTGGTCGTTGTCGTCTTGGGGCGGGAGAATGCGAGCTCAAAATCGTTGA

mRNA sequence

ATGTTTTCTTCACCAAATCCTTCGCTCCGAGCAGCTTTTTGCAGCCCTTTAAGCTCCCGAAACAAGACCATCCGACCGGTGATGAGCATGTCCTGTAAAGGGACGGATTATTACACGTTGCTCTCGGTGAGTGATGGATGTCATGCGAGCAACGAAGACATTAAGAAGGCTTATAGAGCCAAGGCTTTGCAGTATCATCCTGACCTTGTTTGTGATCCTTCCCTCAAAGACAAGTGTACGAGGATGTTTGTTCAGCTGAATGCAGCCTATAAGACACTCTCTGATCCTGTTCTTAGAAGAGAGTATGATGATTCTTTGATGGGTTTGAAAGGCAATCATCATGGCACATCTACAGGATTTAAAGGGGATTATAGAGACCTGTGGCAAAGGCAGATTCTCGAGCTCAATCGGCGGTCGAATCTTCGGAGGAATTGGTCGTTGTCGTCTTGGGGCGGGAGAATGCGAGCTCAAAATCGTTGA

Coding sequence (CDS)

ATGTTTTCTTCACCAAATCCTTCGCTCCGAGCAGCTTTTTGCAGCCCTTTAAGCTCCCGAAACAAGACCATCCGACCGGTGATGAGCATGTCCTGTAAAGGGACGGATTATTACACGTTGCTCTCGGTGAGTGATGGATGTCATGCGAGCAACGAAGACATTAAGAAGGCTTATAGAGCCAAGGCTTTGCAGTATCATCCTGACCTTGTTTGTGATCCTTCCCTCAAAGACAAGTGTACGAGGATGTTTGTTCAGCTGAATGCAGCCTATAAGACACTCTCTGATCCTGTTCTTAGAAGAGAGTATGATGATTCTTTGATGGGTTTGAAAGGCAATCATCATGGCACATCTACAGGATTTAAAGGGGATTATAGAGACCTGTGGCAAAGGCAGATTCTCGAGCTCAATCGGCGGTCGAATCTTCGGAGGAATTGGTCGTTGTCGTCTTGGGGCGGGAGAATGCGAGCTCAAAATCGTTGA

Protein sequence

MFSSPNPSLRAAFCSPLSSRNKTIRPVMSMSCKGTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTSTGFKGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQNR

Homology

[Close]

BLAST of Cp4.1LG04g06960 vs. Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.5e-11
Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 1


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G DYY +L +  G  AS+EDIKKAYR +AL++HPD    P  ++K    F ++  AY+ L
Sbjct: 2   GKDYYCILGIEKG--ASDEDIKKAYRKQALKFHPDKNKSPQAEEK----FKEVAEAYEVL 61

Query: 94  SDPVLRREYDD-SLMGLKGNHHGTSTGFKGDYR 126
           SDP  R  YD     GLKG   GT  G  G +R
Sbjct: 62  SDPKKREIYDQFGEEGLKGGAGGTD-GQGGTFR 87

[Close]

BLAST of Cp4.1LG04g06960 vs. Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.5e-11
Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 1


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G DYY +L +  G  AS+EDIKKAYR +AL++HPD    P  ++K    F ++  AY+ L
Sbjct: 2   GKDYYCILGIEKG--ASDEDIKKAYRKQALKFHPDKNKSPQAEEK----FKEVAEAYEVL 61

Query: 94  SDPVLRREYDD-SLMGLKGNHHGTSTGFKGDYR 126
           SDP  R  YD     GLKG   GT  G  G +R
Sbjct: 62  SDPKKREIYDQFGEEGLKGGAGGTD-GQGGTFR 87

[Close]

BLAST of Cp4.1LG04g06960 vs. Swiss-Prot
Match: DNJ20_ARATH (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 7.2e-11
Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 1


Query: 37  YYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDP 96
           +Y LL V++    +  +IK+AY+  A +YHPD V  P   ++ T  F+++  AY+TLSDP
Sbjct: 67  FYDLLGVTES--VTLPEIKQAYKQLARKYHPD-VSPPDRVEEYTDRFIRVQEAYETLSDP 126

Query: 97  VLRREYD-DSLMGLKGNHHGTSTG--------FKGDYRDLWQRQILELNRRSNLRRNWSL 156
             R  YD D  MG   +  G             K +++  WQ Q+  L RRSN + N + 
Sbjct: 127 RRRVLYDRDLSMGFSFSFSGRRQNRYDQEVVEEKSEWKAKWQTQLSGLRRRSNQKDN-NT 186

Query: 157 SSWGGRMRAQNR 160
            SW  RMR Q +
Sbjct: 187 MSWAARMRRQQQ 194

[Close]

BLAST of Cp4.1LG04g06960 vs. Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 1


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G DYY +L +  G  AS+EDIKKAYR +AL++HPD    P  +++    F ++  AY+ L
Sbjct: 2   GKDYYCILGIEKG--ASDEDIKKAYRKQALRFHPDKNKSPQAEER----FKEVAEAYEVL 61

Query: 94  SDPVLRREYDD-SLMGLKGNHHGTSTGFKGDYR 126
           SDP  R  YD     GLKG   GT  G  G +R
Sbjct: 62  SDPKKREIYDQFGEEGLKGGAGGTD-GQGGTFR 87

[Close]

BLAST of Cp4.1LG04g06960 vs. Swiss-Prot
Match: DNAJ_DICT6 (Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 1


Query: 36  DYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSD 95
           DYY +L V    +A+ ++IK+AYR    QYHPDL  DPS  +K    F ++N AY+ LSD
Sbjct: 6   DYYEILGVPR--NATQDEIKQAYRRLVRQYHPDLNKDPSAHEK----FKEINEAYEVLSD 65

Query: 96  PVLRREYDDSLMGLKGNHHGTSTGFKGDYRDLWQ 130
           P  R +YD      +  H G  +G+ GD++  WQ
Sbjct: 66  PQKRAQYD------QFGHVGDFSGY-GDFQGGWQ 86

[Close]

BLAST of Cp4.1LG04g06960 vs. TrEMBL
Match: A0A0A0K7A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G061190 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.0e-37
Identity = 96/170 (56.47%), Postives = 116/170 (68.24%), Query Frame = 1


Query: 1   MFSSPNPSLRAAFCSPLS-----SRNKTIRPVMSMSCKGT-----DYYTLLSVSDGCHAS 60
           MF+SPN S  +   S LS     S     R    +SCK +     DYY LLSVS GC+AS
Sbjct: 1   MFASPNSSSTSLSLSFLSKTTPPSHQAASRGRFCVSCKASATRERDYYKLLSVSGGCNAS 60

Query: 61  NEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLK 120
            E+IKKAYRA AL+YHPDLVCDP LK++ TRMFVQLNAAYKTLSDPVLRR+YDDSL    
Sbjct: 61  PEEIKKAYRAMALRYHPDLVCDPLLKEQSTRMFVQLNAAYKTLSDPVLRRQYDDSL---- 120

Query: 121 GNHHGTSTGFKGDYRDLWQRQILELNRRSNLRRNWSL-SSWGGRMRAQNR 160
            N    + GF+GD   +W+RQILEL RRS+ R++ S  +SW  RM+A +R
Sbjct: 121 -NMGFNTKGFRGD-SAVWERQILELKRRSSQRKDRSAPASWAARMQAHSR 164

[Close]

BLAST of Cp4.1LG04g06960 vs. TrEMBL
Match: A0A0S3S1Z9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G017600 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-22
Identity = 72/153 (47.06%), Postives = 95/153 (62.09%), Query Frame = 1


Query: 16  PLSSRNKTIRPVM--SMSCKGT--------DYYTLLSVSDGCHASNEDIKKAYRAKALQY 75
           PLS R++T  P M  S+SC+ T        + Y +LS+S    A+ +DIKKAYR+ ALQY
Sbjct: 17  PLSKRHQTQHPRMKFSVSCRATKQQACVEENLYKVLSLSP-MSATTDDIKKAYRSMALQY 76

Query: 76  HPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTSTGFKGDYR 135
           HPD+  D S K++ TRMFVQLNAAY TLS+P LR +YD  L    G  +  S G +  +R
Sbjct: 77  HPDVCHDGSKKEELTRMFVQLNAAYTTLSNPQLRADYDYEL----GLRNKKSVGDE-SWR 136

Query: 136 DLWQRQILELNRRSNLRRNWSLSSWGGRMRAQN 159
             WQ Q++ L RRS+ R      SWG R+RA+N
Sbjct: 137 CRWQEQVVGLKRRSHTRMAQRDGSWGSRVRARN 163

[Close]

BLAST of Cp4.1LG04g06960 vs. TrEMBL
Match: A0A0L9VGG6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g265600 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-22
Identity = 72/153 (47.06%), Postives = 95/153 (62.09%), Query Frame = 1


Query: 16  PLSSRNKTIRPVM--SMSCKGT--------DYYTLLSVSDGCHASNEDIKKAYRAKALQY 75
           PLS R++T  P M  S+SC+ T        + Y +LS+S    A+ +DIKKAYR+ ALQY
Sbjct: 17  PLSKRHQTQHPRMKFSVSCRATKQQACVEENLYKVLSLSP-MSATTDDIKKAYRSMALQY 76

Query: 76  HPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTSTGFKGDYR 135
           HPD+  D S K++ TRMFVQLNAAY TLS+P LR +YD  L    G  +  S G +  +R
Sbjct: 77  HPDVCHDGSKKEELTRMFVQLNAAYTTLSNPQLRADYDYEL----GLRNKKSVGDE-SWR 136

Query: 136 DLWQRQILELNRRSNLRRNWSLSSWGGRMRAQN 159
             WQ Q++ L RRS+ R      SWG R+RA+N
Sbjct: 137 CRWQEQVVGLKRRSHTRMAQRDGSWGSRVRARN 163

[Close]

BLAST of Cp4.1LG04g06960 vs. TrEMBL
Match: A0A061E3C4_THECC (DNAJ-like 20, putative OS=Theobroma cacao GN=TCM_007525 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-22
Identity = 73/158 (46.20%), Postives = 94/158 (59.49%), Query Frame = 1


Query: 13  FCSPLSSRNKTIRPVMS-MSCKG------TDYYTLLSVSDGCHASNEDIKKAYRAKALQY 72
           F S + S     +P+++  SC+       T++Y +LS++    AS ++I+KAYR   LQ+
Sbjct: 15  FLSHVRSHKPQGKPILTAFSCRACEKDQSTNFYKVLSLNSN-QASIDEIQKAYRTMGLQH 74

Query: 73  HPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTSTGFKGDYR 132
           HPD VC P  KD+ TRMFVQL+AAYKTLSDPVLR EYD  L     N  G    F+ D+ 
Sbjct: 75  HPD-VCHPFKKDESTRMFVQLHAAYKTLSDPVLREEYDCILS--SRNFEGK---FRADFA 134

Query: 133 D-----LWQRQILELNRRSNLRRNWSLSSWGGRMRAQN 159
           D      WQ QI EL RRS+ R      SWG RMRA+N
Sbjct: 135 DHYSRIRWQEQIQELKRRSSYRMEQKERSWGNRMRAKN 165

[Close]

BLAST of Cp4.1LG04g06960 vs. TrEMBL
Match: A0A072UZE7_MEDTR (Chaperone DnaJ domain protein OS=Medicago truncatula GN=MTR_4g094275 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.9e-22
Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 1


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G+++Y +LSV+    A+ EDIK+AYR+ ALQYHPD+  DPS+K++ T++FV+LNAAY+TL
Sbjct: 49  GSNFYKMLSVNPKS-ATMEDIKRAYRSMALQYHPDVCHDPSMKEESTKIFVRLNAAYETL 108

Query: 94  SDPVLRREYDDSLMGLKGNHHGTSTGFKGD-YRDLWQRQILELNRRSNLRRNWSLSSWG- 153
           S+P+LR +YD  L GL+ N    +     + +R  WQ Q++EL +RSN R      SWG 
Sbjct: 109 SNPMLREQYDSEL-GLRNNMMNNNNIVNEEIWRSRWQEQVVELKKRSNRRMEQRGRSWGS 168

Query: 154 -GRMRAQN 159
             RMR Q+
Sbjct: 169 TSRMRTQS 174

[Close]

BLAST of Cp4.1LG04g06960 vs. TAIR10
Match: AT4G13830.2 (AT4G13830.2 DNAJ-like 20)

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12
Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 1


Query: 37  YYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDP 96
           +Y LL V++    +  +IK+AY+  A +YHPD V  P   ++ T  F+++  AY+TLSDP
Sbjct: 67  FYDLLGVTES--VTLPEIKQAYKQLARKYHPD-VSPPDRVEEYTDRFIRVQEAYETLSDP 126

Query: 97  VLRREYD-DSLMGLKGNHHGTSTG--------FKGDYRDLWQRQILELNRRSNLRRNWSL 156
             R  YD D  MG   +  G             K +++  WQ Q+  L RRSN + N + 
Sbjct: 127 RRRVLYDRDLSMGFSFSFSGRRQNRYDQEVVEEKSEWKAKWQTQLSGLRRRSNQKDN-NT 186

Query: 157 SSWGGRMRAQNR 160
            SW  RMR Q +
Sbjct: 187 MSWAARMRRQQQ 194

[Close]

BLAST of Cp4.1LG04g06960 vs. TAIR10
Match: AT2G20560.1 (AT2G20560.1 DNAJ heat shock family protein)

HSP 1 Score: 65.1 bits (157), Expect = 4.5e-11
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 1


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G DYY +L V     AS++D+KKAYR  A+++HPD   +P+ K     MF Q++ AY+ L
Sbjct: 2   GVDYYKVLQVDRS--ASDDDLKKAYRKLAMKWHPDK--NPNNKKDAEAMFKQISEAYEVL 61

Query: 94  SDPVLRREYDD-SLMGLKGN 113
           SDP  +  YD     GLKGN
Sbjct: 62  SDPQKKAVYDQYGEEGLKGN 77

[Close]

BLAST of Cp4.1LG04g06960 vs. TAIR10
Match: AT2G35720.1 (AT2G35720.1 DNAJ heat shock N-terminal domain-containing protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-10
Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 1


Query: 36  DYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSD 95
           + Y LL++S    AS+E+I+KAYR  A  YHPD +  P +K+  T  F ++  AY+ LSD
Sbjct: 15  ELYALLNLSP--EASDEEIRKAYRQWAQVYHPDKIQSPQMKEVATENFQRICEAYEILSD 74

Query: 96  PVLRREYDDSLMGLKGNHHGTSTGFKGDYRDLWQRQILELNRRS 140
              R  YD  L G++G + G   G +    D  + ++  + RR+
Sbjct: 75  ETKRLIYD--LYGMEGLNSGLELGPRLSKADEIKEELERIKRRN 114

[Close]

BLAST of Cp4.1LG04g06960 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10
Identity = 44/123 (35.77%), Postives = 65/123 (52.85%), Query Frame = 1


Query: 8   SLRAAFCSPLSSRNKTIRPVMSMSCKGTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHP 67
           SL ++  S    RN+  R ++  +  G DYY  L VS    A+N++IK AYR  A QYHP
Sbjct: 48  SLSSSSSSSTPYRNRRGRSLVVFATSG-DYYATLGVSKS--ANNKEIKAAYRRLARQYHP 107

Query: 68  DLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDD-SLMGLKGNHHGTSTGFKGDYRD 127
           D+  +P   +K    F +++AAY+ LSD   R  YD     G+K    G S  +  +  D
Sbjct: 108 DVNKEPGATEK----FKEISAAYEVLSDEQKRALYDQYGEAGVKSTVGGASGPYTSNPFD 163

Query: 128 LWQ 130
           L++
Sbjct: 168 LFE 163

[Close]

BLAST of Cp4.1LG04g06960 vs. TAIR10
Match: AT4G28480.1 (AT4G28480.1 DNAJ heat shock family protein)

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-10
Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 1


Query: 34  GTDYYTLLSVSDGCHASNEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTL 93
           G DYY +L V     A+++D+KKAYR  A+++HPD   +P+ K      F Q++ AY  L
Sbjct: 2   GVDYYKVLQVDRS--ANDDDLKKAYRKLAMKWHPDK--NPNNKKDAEAKFKQISEAYDVL 61

Query: 94  SDPVLRREYDD-SLMGLKGN 113
           SDP  R  YD     GLKGN
Sbjct: 62  SDPQKRAVYDQYGEEGLKGN 77

[Close]

BLAST of Cp4.1LG04g06960 vs. NCBI nr
Match: gi|659111015|ref|XP_008455532.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo])

HSP 1 Score: 169.9 bits (429), Expect = 3.7e-39
Identity = 98/168 (58.33%), Postives = 120/168 (71.43%), Query Frame = 1


Query: 1   MFSSPNPSLRAAFCSPLSSRN-KTIRPVMSMSCKGT-------DYYTLLSVSDGCHASNE 60
           MF+SPN SL  +F S  +  + +  R    +SCK         +YY LLSVS GC+AS E
Sbjct: 1   MFASPN-SLSLSFPSKATPPSFQASRGRCCVSCKAAASTKERDNYYKLLSVSGGCNASPE 60

Query: 61  DIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGN 120
           +IKKAYRA AL+YHPDLVCDPSLK++ TRMFVQLNAAYKTLSDPVLRR+YDDSLMG    
Sbjct: 61  EIKKAYRAMALRYHPDLVCDPSLKEQSTRMFVQLNAAYKTLSDPVLRRQYDDSLMGF--- 120

Query: 121 HHGTSTGFKGDYRDLWQRQILELNRRSNLRRNWSL-SSWGGRMRAQNR 160
               +  F+GD   +WQRQILEL RRS+LR++ S  +SW  RM+AQ+R
Sbjct: 121 ---NTKRFQGDSAAVWQRQILELKRRSSLRKDRSAPASWAARMQAQSR 161

[Close]

BLAST of Cp4.1LG04g06960 vs. NCBI nr
Match: gi|449438177|ref|XP_004136866.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 1.0e-36
Identity = 96/170 (56.47%), Postives = 116/170 (68.24%), Query Frame = 1


Query: 1   MFSSPNPSLRAAFCSPLS-----SRNKTIRPVMSMSCKGT-----DYYTLLSVSDGCHAS 60
           MF+SPN S  +   S LS     S     R    +SCK +     DYY LLSVS GC+AS
Sbjct: 1   MFASPNSSSTSLSLSFLSKTTPPSHQAASRGRFCVSCKASATRERDYYKLLSVSGGCNAS 60

Query: 61  NEDIKKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLK 120
            E+IKKAYRA AL+YHPDLVCDP LK++ TRMFVQLNAAYKTLSDPVLRR+YDDSL    
Sbjct: 61  PEEIKKAYRAMALRYHPDLVCDPLLKEQSTRMFVQLNAAYKTLSDPVLRRQYDDSL---- 120

Query: 121 GNHHGTSTGFKGDYRDLWQRQILELNRRSNLRRNWSL-SSWGGRMRAQNR 160
            N    + GF+GD   +W+RQILEL RRS+ R++ S  +SW  RM+A +R
Sbjct: 121 -NMGFNTKGFRGD-SAVWERQILELKRRSSQRKDRSAPASWAARMQAHSR 164

[Close]

BLAST of Cp4.1LG04g06960 vs. NCBI nr
Match: gi|502142064|ref|XP_004504775.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cicer arietinum])

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25
Identity = 72/153 (47.06%), Postives = 96/153 (62.75%), Query Frame = 1


Query: 21  NKTIRPV---MSMSCK------------GTDYYTLLSVSDGCHASNEDIKKAYRAKALQY 80
           NK  RP     ++SCK            G+++Y +LSV+   +A+ E+IKKAYR+ ALQY
Sbjct: 26  NKQQRPCEVHFTISCKATKLKNMEETKHGSNFYKMLSVNPK-NATMEEIKKAYRSMALQY 85

Query: 81  HPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTSTGFKGDYR 140
           HPD+  DP++K++ TRMFVQLN AYKTLS+P+LR +YD  L GLK N    +   +  +R
Sbjct: 86  HPDVCHDPNMKEESTRMFVQLNVAYKTLSNPMLREQYDSEL-GLKNNMVINNIVSEEMWR 145

Query: 141 DLWQRQILELNRRSNLRRNWSLSSWGGRMRAQN 159
             WQ QI+EL +RS  R      SWG RMR QN
Sbjct: 146 SRWQEQIVELKKRSRRRMEQKEGSWGSRMRTQN 176

[Close]

BLAST of Cp4.1LG04g06960 vs. NCBI nr
Match: gi|920712748|gb|KOM53997.1| (hypothetical protein LR48_Vigan09g265600 [Vigna angularis])

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-22
Identity = 72/153 (47.06%), Postives = 95/153 (62.09%), Query Frame = 1


Query: 16  PLSSRNKTIRPVM--SMSCKGT--------DYYTLLSVSDGCHASNEDIKKAYRAKALQY 75
           PLS R++T  P M  S+SC+ T        + Y +LS+S    A+ +DIKKAYR+ ALQY
Sbjct: 17  PLSKRHQTQHPRMKFSVSCRATKQQACVEENLYKVLSLSP-MSATTDDIKKAYRSMALQY 76

Query: 76  HPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTSTGFKGDYR 135
           HPD+  D S K++ TRMFVQLNAAY TLS+P LR +YD  L    G  +  S G +  +R
Sbjct: 77  HPDVCHDGSKKEELTRMFVQLNAAYTTLSNPQLRADYDYEL----GLRNKKSVGDE-SWR 136

Query: 136 DLWQRQILELNRRSNLRRNWSLSSWGGRMRAQN 159
             WQ Q++ L RRS+ R      SWG R+RA+N
Sbjct: 137 CRWQEQVVGLKRRSHTRMAQRDGSWGSRVRARN 163

[Close]

BLAST of Cp4.1LG04g06960 vs. NCBI nr
Match: gi|590688672|ref|XP_007043015.1| (DNAJ-like 20, putative [Theobroma cacao])

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-22
Identity = 73/158 (46.20%), Postives = 94/158 (59.49%), Query Frame = 1


Query: 13  FCSPLSSRNKTIRPVMS-MSCKG------TDYYTLLSVSDGCHASNEDIKKAYRAKALQY 72
           F S + S     +P+++  SC+       T++Y +LS++    AS ++I+KAYR   LQ+
Sbjct: 15  FLSHVRSHKPQGKPILTAFSCRACEKDQSTNFYKVLSLNSN-QASIDEIQKAYRTMGLQH 74

Query: 73  HPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHHGTSTGFKGDYR 132
           HPD VC P  KD+ TRMFVQL+AAYKTLSDPVLR EYD  L     N  G    F+ D+ 
Sbjct: 75  HPD-VCHPFKKDESTRMFVQLHAAYKTLSDPVLREEYDCILS--SRNFEGK---FRADFA 134

Query: 133 D-----LWQRQILELNRRSNLRRNWSLSSWGGRMRAQN 159
           D      WQ QI EL RRS+ R      SWG RMRA+N
Sbjct: 135 DHYSRIRWQEQIQELKRRSSYRMEQKERSWGNRMRAKN 165

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g06960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DNJB4_HUMAN	5.5e-11	45.16	DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1	[more]
DNJB4_PONAB	5.5e-11	45.16	DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1	[more]
DNJ20_ARATH	7.2e-11	35.61	Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=1 S...	[more]
DNJB4_BOVIN	1.2e-10	44.09	DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1	[more]
DNAJ_DICT6	1.6e-10	41.49	Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 396...	[more]

BLAST of Cp4.1LG04g06960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7A4_CUCSA	7.0e-37	56.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G061190 PE=4 SV=1	[more]
A0A0S3S1Z9_PHAAN	1.3e-22	47.06	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G017600 PE=...	[more]
A0A0L9VGG6_PHAAN	1.3e-22	47.06	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g265600 PE=4 SV=1	[more]
A0A061E3C4_THECC	1.3e-22	46.20	DNAJ-like 20, putative OS=Theobroma cacao GN=TCM_007525 PE=4 SV=1	[more]
A0A072UZE7_MEDTR	2.9e-22	47.66	Chaperone DnaJ domain protein OS=Medicago truncatula GN=MTR_4g094275 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g06960 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13830.2	4.1e-12	35.61	DNAJ-like 20	[more]
AT2G20560.1	4.5e-11	45.00	DNAJ heat shock family protein	[more]
AT2G35720.1	1.3e-10	35.58	DNAJ heat shock N-terminal domain-containing protein	[more]
AT1G80030.1	1.7e-10	35.77	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT4G28480.1	3.8e-10	43.75	DNAJ heat shock family protein	[more]

BLAST of Cp4.1LG04g06960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111015\|ref\|XP_008455532.1\|	3.7e-39	58.33	PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo]	[more]
gi\|449438177\|ref\|XP_004136866.1\|	1.0e-36	56.47	PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis sativus]	[more]
gi\|502142064\|ref\|XP_004504775.1\|	1.4e-25	47.06	PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cicer arietinum]	[more]
gi\|920712748\|gb\|KOM53997.1\|	1.8e-22	47.06	hypothetical protein LR48_Vigan09g265600 [Vigna angularis]	[more]
gi\|590688672\|ref\|XP_007043015.1\|	1.8e-22	46.20	DNAJ-like 20, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001623	DnaJ_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g06960.1	Cp4.1LG04g06960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 78..98 score: 6.7E-6coord: 58..73 score: 6.7E-6coord: 40..58 score: 6.
IPR001623	DnaJ domain	GENE3D	G3DSA:1.10.287.110		coord: 27..121 score: 3.9
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 36..103 score: 3.3
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 35..98 score: 1.4
IPR001623	DnaJ domain	PROFILE	PS50076	DNAJ_2	coord: 36..106 score: 16
IPR001623	DnaJ domain	unknown	SSF46565	Chaperone J-domain	coord: 32..116 score: 1.13
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 28..129 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g06960	Cucsa.217800	Cucumber (Gy14) v1	cgycpeB0602
Cp4.1LG04g06960	CmaCh19G002670	Cucurbita maxima (Rimu)	cmacpeB538
Cp4.1LG04g06960	CmoCh11G014930	Cucurbita moschata (Rifu)	cmocpeB126
Cp4.1LG04g06960	CmoCh19G002870	Cucurbita moschata (Rifu)	cmocpeB493
Cp4.1LG04g06960	Cla006400	Watermelon (97103) v1	cpewmB638
Cp4.1LG04g06960	Csa7G061190	Cucumber (Chinese Long) v2	cpecuB695
Cp4.1LG04g06960	MELO3C018658	Melon (DHL92) v3.5.1	cpemeB604
Cp4.1LG04g06960	ClCG09G015230	Watermelon (Charleston Gray)	cpewcgB578
Cp4.1LG04g06960	CSPI07G05400	Wild cucumber (PI 183967)	cpecpiB697
Cp4.1LG04g06960	Lsi03G007760	Bottle gourd (USVL1VR-Ls)	cpelsiB544
Cp4.1LG04g06960	MELO3C018658.2	Melon (DHL92) v3.6.1	cpemedB715
Cp4.1LG04g06960	CsaV3_7G006340	Cucumber (Chinese Long) v3	cpecucB0868
Cp4.1LG04g06960	Bhi05G000681	Wax gourd	cpewgoB0853
Cp4.1LG04g06960	CsGy7G005000	Cucumber (Gy14) v2	cgybcpeB969
Cp4.1LG04g06960	Carg23983	Silver-seed gourd	carcpeB1035
Cp4.1LG04g06960	Carg24569	Silver-seed gourd	carcpeB0920

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG04g06960	Cp4.1LG15g02350	Cucurbita pepo (Zucchini)	cpecpeB268

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG04g06960	Cucurbita maxima (Rimu)	cmacpeB154