Carg23125 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23125
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ethylene-responsive transcription factor
Location	Cucurbita_argyrosperma_scaffold_194 : 31715 .. 32293 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCCGATCAGCCAATTGACTCTCTCTACAGAGCCTTCTTCCAAACCCAATTCTCCCAATCCCCACCGCCGGACTCCCAGCTCGACGGAATCGCCGCCGTCGTCGGCCGGAAAGTCCTATTCGGCGACATTCCTCCCTCAACCAGCGGATCAAAGACGCCGGCCGTTACGGGGCAGAAGAGTTATAGAGGAGTACGAAAGCGGCCGTGGGGACGGTGGTCGGCAGAGATACGAGACCGAATCGGACGGTGCAGACACTGGCTGGGAACGTTCGATACAGCGGAAGAGGCGGCGCGTGCATACGACGCGGCGGCGAGGCGGTTGAGAGGATCCAAGGCGCGAACTAACTTCGAAATGCCGTTGGTTGTGCCGCTTGAGTCCACATCGTCATCATCCACGTCATCAGTGGAAGGGAAAAGGAATGGTAATAATAGTAACAAGTTGAAGGCGGTGAAGAAACCAAATGGACGGAAATGTGCGGTGGTTACGACGGCGGCGCATTTGTTCAGCCGTGGAATGGAGCTTGATTTGAAACTGGGTGTTGACTTTGTTAATGGTGGTCAAAGCGCATCATAA

mRNA sequence

ATGATTTCCGATCAGCCAATTGACTCTCTCTACAGAGCCTTCTTCCAAACCCAATTCTCCCAATCCCCACCGCCGGACTCCCAGCTCGACGGAATCGCCGCCGTCGTCGGCCGGAAAGTCCTATTCGGCGACATTCCTCCCTCAACCAGCGGATCAAAGACGCCGGCCGTTACGGGGCAGAAGAGTTATAGAGGAGTACGAAAGCGGCCGTGGGGACGGTGGTCGGCAGAGATACGAGACCGAATCGGACGGTGCAGACACTGGCTGGGAACGTTCGATACAGCGGAAGAGGCGGCGCGTGCATACGACGCGGCGGCGAGGCGGTTGAGAGGATCCAAGGCGCGAACTAACTTCGAAATGCCGTTGGTTGTGCCGCTTGAGTCCACATCGTCATCATCCACGTCATCAGTGGAAGGGAAAAGGAATGGTAATAATAGTAACAAGTTGAAGGCGGTGAAGAAACCAAATGGACGGAAATGTGCGGTGGTTACGACGGCGGCGCATTTGTTCAGCCGTGGAATGGAGCTTGATTTGAAACTGGGTGTTGACTTTGTTAATGGTGGTCAAAGCGCATCATAA

Coding sequence (CDS)

ATGATTTCCGATCAGCCAATTGACTCTCTCTACAGAGCCTTCTTCCAAACCCAATTCTCCCAATCCCCACCGCCGGACTCCCAGCTCGACGGAATCGCCGCCGTCGTCGGCCGGAAAGTCCTATTCGGCGACATTCCTCCCTCAACCAGCGGATCAAAGACGCCGGCCGTTACGGGGCAGAAGAGTTATAGAGGAGTACGAAAGCGGCCGTGGGGACGGTGGTCGGCAGAGATACGAGACCGAATCGGACGGTGCAGACACTGGCTGGGAACGTTCGATACAGCGGAAGAGGCGGCGCGTGCATACGACGCGGCGGCGAGGCGGTTGAGAGGATCCAAGGCGCGAACTAACTTCGAAATGCCGTTGGTTGTGCCGCTTGAGTCCACATCGTCATCATCCACGTCATCAGTGGAAGGGAAAAGGAATGGTAATAATAGTAACAAGTTGAAGGCGGTGAAGAAACCAAATGGACGGAAATGTGCGGTGGTTACGACGGCGGCGCATTTGTTCAGCCGTGGAATGGAGCTTGATTTGAAACTGGGTGTTGACTTTGTTAATGGTGGTCAAAGCGCATCATAA

Protein sequence

MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTSGSKTPAVTGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPLVVPLESTSSSSTSSVEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLFSRGMELDLKLGVDFVNGGQSAS

Homology

[Close]

BLAST of Carg23125 vs. NCBI nr
Match: XP_022960429.1 (ethylene-responsive transcription factor ERF084-like [Cucurbita moschata])

HSP 1 Score: 343.6 bits (880), Expect = 4.4e-91
Identity = 180/192 (93.75%), Postives = 180/192 (93.75%), Query Frame = 0


Query: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTSGSKTPAVTGQ 60
           MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTSGSKTPAVTGQ
Sbjct: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTSGSKTPAVTGQ 60

Query: 61  KSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEM 120
           KSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEM
Sbjct: 61  KSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEM 120

Query: 121 PLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLFSRGMELDLKL 180
           PLVVPLESTS XXXXXX          KLKAVKKPNGRKCAVVTTAAHLFSRGMELDLKL
Sbjct: 121 PLVVPLESTSXXXXXXXXXXXXXXXXXKLKAVKKPNGRKCAVVTTAAHLFSRGMELDLKL 180

Query: 181 GVDFVNGGQSAS 193
           G DFVNGGQSAS
Sbjct: 181 GFDFVNGGQSAS 192

[Close]

BLAST of Carg23125 vs. NCBI nr
Match: XP_023004864.1 (ethylene-responsive transcription factor ERF084 [Cucurbita maxima])

HSP 1 Score: 341.7 bits (875), Expect = 1.7e-90
Identity = 179/192 (93.23%), Postives = 180/192 (93.75%), Query Frame = 0


Query: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTSGSKTPAVTGQ 60
           MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTSGSK PAVTGQ
Sbjct: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTSGSKAPAVTGQ 60

Query: 61  KSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEM 120
           KSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEM
Sbjct: 61  KSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEM 120

Query: 121 PLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLFSRGMELDLKL 180
           PLVVPLESTS XXXXXX          KLKAVKKP+GRKCAVVTTAAHLFSRGMELDLKL
Sbjct: 121 PLVVPLESTSXXXXXXXXXXXXXXXXXKLKAVKKPSGRKCAVVTTAAHLFSRGMELDLKL 180

Query: 181 GVDFVNGGQSAS 193
           GVDFVNGGQSAS
Sbjct: 181 GVDFVNGGQSAS 192

[Close]

BLAST of Carg23125 vs. NCBI nr
Match: XP_023514530.1 (ethylene-responsive transcription factor ERF084 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.5 bits (872), Expect = 3.7e-90
Identity = 179/192 (93.23%), Postives = 180/192 (93.75%), Query Frame = 0


Query: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTSGSKTPAVTGQ 60
           MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTS SKTPAVTGQ
Sbjct: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPPSTSRSKTPAVTGQ 60

Query: 61  KSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEM 120
           KSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEM
Sbjct: 61  KSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEM 120

Query: 121 PLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLFSRGMELDLKL 180
           PLVVPLESTS XXXXXX          KLKAVKKP+GRKCAVVTTAAHLFSRGMELDLKL
Sbjct: 121 PLVVPLESTSXXXXXXXXXXXXXXXXXKLKAVKKPSGRKCAVVTTAAHLFSRGMELDLKL 180

Query: 181 GVDFVNGGQSAS 193
           GVDFVNGGQSAS
Sbjct: 181 GVDFVNGGQSAS 192

[Close]

BLAST of Carg23125 vs. NCBI nr
Match: KGN45232.1 (hypothetical protein Csa_7G432130 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 3.9e-63
Identity = 135/187 (72.19%), Postives = 144/187 (77.01%), Query Frame = 0


Query: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPP-----STSGSKTP 60
           MI+  PI  LY  F    F  SPPPDSQLDGIAAVVGR+VLFGD  P     S+S S T 
Sbjct: 1   MINTHPIPPLYNTF----FPHSPPPDSQLDGIAAVVGRQVLFGDNRPTPTKSSSSTSATA 60

Query: 61  AVTGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR 120
             TGQ+SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR
Sbjct: 61  PTTGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR 120

Query: 121 TNFEMPLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLFSRGME 180
           TNFEMPLVVP+ESTS+      E KRNGN   K       N RKC+VVT+AAHLFS G+E
Sbjct: 121 TNFEMPLVVPMESTSAWSTSSVEVKRNGNKLKK-------NDRKCSVVTSAAHLFSPGVE 176

Query: 181 LDLKLGV 183
           LDLKLGV
Sbjct: 181 LDLKLGV 176

[Close]

BLAST of Carg23125 vs. NCBI nr
Match: XP_022953923.1 (ethylene-responsive transcription factor ERF084-like [Cucurbita moschata])

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 124/180 (68.89%), Postives = 136/180 (75.56%), Query Frame = 0


Query: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDI-PPSTSGSKT-PAVT 60
           MI++ PI SL+ A            + QLDGIAAVVG KVL GDI P S +G KT  A T
Sbjct: 1   MINNPPIPSLHDAV----------SEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAAAT 60

Query: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120
           GQ+SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF
Sbjct: 61  GQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120

Query: 121 EMPLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLFSRGMELDL 179
           EMPL+VP+ESTSS         +   N NKL    K NGRKC+VVT+AAHLFS G+ELDL
Sbjct: 121 EMPLIVPVESTSSLPI----SSKQNRNGNKL----KKNGRKCSVVTSAAHLFSPGLELDL 162

[Close]

BLAST of Carg23125 vs. TAIR10
Match: AT1G80580.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 138.7 bits (348), Expect = 3.9e-33
Identity = 91/203 (44.83%), Postives = 104/203 (51.23%), Query Frame = 0


Query: 19  FSQSPPPDSQL------DGIAAVVGRKVLFGDIPPSTS----------GSKTPAVTGQKS 78
           FS +P P+ +       D IAAVVG  VLFGD    +           G K P  TG   
Sbjct: 58  FSFNPKPEPENTHRVMDDSIAAVVGENVLFGDKNKVSDHLTKEGGVKRGRKMPQKTG--G 117

Query: 79  YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPL 138
           + GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG+KA+TNF +P 
Sbjct: 118 FMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNFVIPP 177

Query: 139 VVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLF------------ 183
           + P E   +                          RKC  VT+ A LF            
Sbjct: 178 LFPKEIAQA------XXXXXXXXXXXXXXXXXXXXRKCVKVTSVAQLFDDANFINSSSIK 237

[Close]

BLAST of Carg23125 vs. TAIR10
Match: AT1G53910.1 (related to AP2 12)

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21
Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 19  FSQSPPPDSQLDGIAAVVGRKV--LFGDIPPSTSGSKTPAVTGQKSYRGVRKRPWGRWSA 78
           F+ +P P        +V G+KV  L GD   S +  +      +  YRG+R+RPWG+W+A
Sbjct: 85  FTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKR------KNQYRGIRQRPWGKWAA 144

Query: 79  EIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 119
           EIRD     R WLGTF TAEEAARAYDAAARR+RGSKA+ NF
Sbjct: 145 EIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180

[Close]

BLAST of Carg23125 vs. TAIR10
Match: AT3G14230.1 (related to AP2 2)

HSP 1 Score: 95.9 bits (237), Expect = 2.9e-20
Identity = 54/110 (49.09%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 60  QKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFE 119
           +  YRG+R+RPWG+W+AEIRD     R WLGTFDTAEEAARAYDAAARR+RG+KA+ NF 
Sbjct: 125 KNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNF- 184

Query: 120 MPLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHL 170
                P E   S      + + +   +N  K+V KPN +   +V    HL
Sbjct: 185 -----PEEKNPS---VVSQKRPSAKTNNLQKSVAKPN-KSVTLVQQPTHL 224

[Close]

BLAST of Carg23125 vs. TAIR10
Match: AT5G44210.1 (erf domain protein 9)

HSP 1 Score: 95.5 bits (236), Expect = 3.8e-20
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 51  GSKTPAVTGQKS---YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAAR 110
           G KT  +T  +    +RGVRKRPWGR++AEIRD   + R WLGTFDTAEEAARAYD AAR
Sbjct: 18  GGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAR 77

Query: 111 RLRGSKARTNFEMP 122
             RGSKA+TNF +P
Sbjct: 78  EFRGSKAKTNFPLP 91

[Close]

BLAST of Carg23125 vs. TAIR10
Match: AT1G12980.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-19
Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 0


Query: 63  YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPL 122
           YRGVR+RPWGR++AEIRD + + R WLGTFDTAE+AA AYD+AAR  RG+KARTNF  P 
Sbjct: 57  YRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTYPT 116

Query: 123 VV 125
            V
Sbjct: 117 AV 118

[Close]

BLAST of Carg23125 vs. Swiss-Prot
Match: sp|Q9M8M5|ERF84_ARATH (Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana OX=3702 GN=ERF084 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.0e-32
Identity = 91/203 (44.83%), Postives = 104/203 (51.23%), Query Frame = 0


Query: 19  FSQSPPPDSQL------DGIAAVVGRKVLFGDIPPSTS----------GSKTPAVTGQKS 78
           FS +P P+ +       D IAAVVG  VLFGD    +           G K P  TG   
Sbjct: 58  FSFNPKPEPENTHRVMDDSIAAVVGENVLFGDKNKVSDHLTKEGGVKRGRKMPQKTG--G 117

Query: 79  YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPL 138
           + GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG+KA+TNF +P 
Sbjct: 118 FMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNFVIPP 177

Query: 139 VVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLF------------ 183
           + P E   +                          RKC  VT+ A LF            
Sbjct: 178 LFPKEIAQA------XXXXXXXXXXXXXXXXXXXXRKCVKVTSVAQLFDDANFINSSSIK 237

[Close]

BLAST of Carg23125 vs. Swiss-Prot
Match: sp|Q9SSA8|RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.1e-20
Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 19  FSQSPPPDSQLDGIAAVVGRKV--LFGDIPPSTSGSKTPAVTGQKSYRGVRKRPWGRWSA 78
           F+ +P P        +V G+KV  L GD   S +  +      +  YRG+R+RPWG+W+A
Sbjct: 85  FTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKR------KNQYRGIRQRPWGKWAA 144

Query: 79  EIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 119
           EIRD     R WLGTF TAEEAARAYDAAARR+RGSKA+ NF
Sbjct: 145 EIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180

[Close]

BLAST of Carg23125 vs. Swiss-Prot
Match: sp|Q9LUM4|RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 5.2e-19
Identity = 54/110 (49.09%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 60  QKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFE 119
           +  YRG+R+RPWG+W+AEIRD     R WLGTFDTAEEAARAYDAAARR+RG+KA+ NF 
Sbjct: 125 KNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNF- 184

Query: 120 MPLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHL 170
                P E   S      + + +   +N  K+V KPN +   +V    HL
Sbjct: 185 -----PEEKNPS---VVSQKRPSAKTNNLQKSVAKPN-KSVTLVQQPTHL 224

[Close]

BLAST of Carg23125 vs. Swiss-Prot
Match: sp|Q9FE67|ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 6.8e-19
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 51  GSKTPAVTGQKS---YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAAR 110
           G KT  +T  +    +RGVRKRPWGR++AEIRD   + R WLGTFDTAEEAARAYD AAR
Sbjct: 18  GGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAR 77

Query: 111 RLRGSKARTNFEMP 122
             RGSKA+TNF +P
Sbjct: 78  EFRGSKAKTNFPLP 91

[Close]

BLAST of Carg23125 vs. Swiss-Prot
Match: sp|Q9LW49|ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.4e-18
Identity = 51/86 (59.30%), Postives = 59/86 (68.60%), Query Frame = 0


Query: 36  VGRKVLFGDIPPSTSGSKTPAVTGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTA 95
           V  KV  GD+       KT  V  +  YRGVRKRPWGR++AEIRD   + R WLGTFDTA
Sbjct: 3   VKNKVSNGDL--KGGNVKTNGVK-EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTA 62

Query: 96  EEAARAYDAAARRLRGSKARTNFEMP 122
           EEAA+AYD AAR  RG KA+TNF +P
Sbjct: 63  EEAAKAYDTAAREFRGPKAKTNFPLP 85

[Close]

BLAST of Carg23125 vs. TrEMBL
Match: tr|A0A0A0KA16|A0A0A0KA16_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432130 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.6e-63
Identity = 135/187 (72.19%), Postives = 144/187 (77.01%), Query Frame = 0


Query: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDIPP-----STSGSKTP 60
           MI+  PI  LY  F    F  SPPPDSQLDGIAAVVGR+VLFGD  P     S+S S T 
Sbjct: 1   MINTHPIPPLYNTF----FPHSPPPDSQLDGIAAVVGRQVLFGDNRPTPTKSSSSTSATA 60

Query: 61  AVTGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR 120
             TGQ+SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR
Sbjct: 61  PTTGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAR 120

Query: 121 TNFEMPLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLFSRGME 180
           TNFEMPLVVP+ESTS+      E KRNGN   K       N RKC+VVT+AAHLFS G+E
Sbjct: 121 TNFEMPLVVPMESTSAWSTSSVEVKRNGNKLKK-------NDRKCSVVTSAAHLFSPGVE 176

Query: 181 LDLKLGV 183
           LDLKLGV
Sbjct: 181 LDLKLGV 176

[Close]

BLAST of Carg23125 vs. TrEMBL
Match: tr|B9SWS6|B9SWS6_RICCO (DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0010830 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.2e-42
Identity = 113/201 (56.22%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 20  SQSPPPDSQLDGIAAVVGRKVLFG---DIP------PSTS---GSKTP---------AVT 79
           ++SPP    LDGIAAVVG  VLFG   D P      PS S   GS+            V 
Sbjct: 93  TESPP---ILDGIAAVVGEHVLFGTSADAPKPQSQEPSISQRTGSRKKDGEIHGGGRGVG 152

Query: 80  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 139
           GQ++YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG+KARTNF
Sbjct: 153 GQRTYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNF 212

Query: 140 EMPLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLF-------S 193
           E+P VVP+  + +        KRN   S+        +GRKCAVVT+ AHLF       S
Sbjct: 213 EIPSVVPISGSLNEVK-----KRNSKVSS--------SGRKCAVVTSVAHLFSDTSCNIS 272

[Close]

BLAST of Carg23125 vs. TrEMBL
Match: tr|A0A067KL79|A0A067KL79_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06067 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40
Identity = 104/175 (59.43%), Postives = 117/175 (66.86%), Query Frame = 0


Query: 25  PDSQ------LDGIAAVVGRKVLFG--------DIPPSTS---GSKTP--------AVTG 84
           PD+Q      LDGIAAVVG+ +LFG        ++  S S   GSKT          VTG
Sbjct: 79  PDTQTQSLPVLDGIAAVVGQHILFGTNTSANGKNLETSISQRTGSKTTNHEDDGHRKVTG 138

Query: 85  ---QKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKART 144
              Q+SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG+KART
Sbjct: 139 MPMQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKART 198

Query: 145 NFEMPLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNGRKCAVVTTAAHLFS 172
           NFE+P V+P+ S +S        KRN N  N         G+KCAVVT+ AHLFS
Sbjct: 199 NFEIPSVLPISSPTSSGSSTEVRKRNSNKGN--------GGKKCAVVTSVAHLFS 245

[Close]

BLAST of Carg23125 vs. TrEMBL
Match: tr|A0A2N9F687|A0A2N9F687_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12597 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.0e-40
Identity = 111/202 (54.95%), Postives = 128/202 (63.37%), Query Frame = 0


Query: 20  SQSPPPDSQLDGIAAVVGRKVLFGDI-------PPSTSG-----SKTPA---VTGQKSYR 79
           +++P P   LDGIAAVVG+ VLFG +        P  SG      K P    V+GQKSYR
Sbjct: 65  TETPSPVPVLDGIAAVVGQHVLFGGVNNSNNKNNPENSGFVSIEKKGPTKKNVSGQKSYR 124

Query: 80  GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPLVV 139
           GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFE+P V+
Sbjct: 125 GVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEIPSVL 184

Query: 140 PLESTSSXXXXXXEGK--------RNGNNSNKLKAVKKPNGRKCAVVTTAAHLF------ 187
                  XXXXXX               + NK  A  K N +KC+VVT+ + LF      
Sbjct: 185 XXXXXXXXXXXXXXXXXXXXXXXVMKNMSGNKKSAAGKKNCKKCSVVTSVSQLFTTSIAT 244

[Close]

BLAST of Carg23125 vs. TrEMBL
Match: tr|A0A0D2NQ20|A0A0D2NQ20_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_006G107500 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.0e-40
Identity = 109/216 (50.46%), Postives = 123/216 (56.94%), Query Frame = 0


Query: 15  FQTQFSQS-------PPPDSQLDGIAAVVGRKVLFG-DIPPSTSGSK------------- 74
           F T+FS S       P     LDGIAAVVG+ VLFG    P+TS S+             
Sbjct: 51  FYTEFSDSGNGIGTYPETQPVLDGIAAVVGQHVLFGTKTNPTTSNSQGDGDRASTEETSS 110

Query: 75  ----------------TPAVTGQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEE 134
                             A + QKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEE
Sbjct: 111 FVSASHRFGSNKRNVNAAAASMQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEE 170

Query: 135 AARAYDAAARRLRGSKARTNFEMPLVVPLESTSSXXXXXXEGKRNGNNSNKLKAVKKPNG 187
           AARAYD AARRLRGSKA+TNFE+P  + L S  S      E K+      K+K+      
Sbjct: 171 AARAYDTAARRLRGSKAKTNFEIPSTLRLSSPCSTSSSSTEAKK------KVKSKGNKTQ 230

The following BLAST results are available for this feature:

BLAST of Carg23125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960429.1	4.4e-91	93.75	ethylene-responsive transcription factor ERF084-like [Cucurbita moschata]	[more]
XP_023004864.1	1.7e-90	93.23	ethylene-responsive transcription factor ERF084 [Cucurbita maxima]	[more]
XP_023514530.1	3.7e-90	93.23	ethylene-responsive transcription factor ERF084 [Cucurbita pepo subsp. pepo]	[more]
KGN45232.1	3.9e-63	72.19	hypothetical protein Csa_7G432130 [Cucumis sativus]	[more]
XP_022953923.1	1.9e-54	68.89	ethylene-responsive transcription factor ERF084-like [Cucurbita moschata]	[more]

BLAST of Carg23125 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80580.1	3.9e-33	44.83	Integrase-type DNA-binding superfamily protein	[more]
AT1G53910.1	3.4e-21	51.96	related to AP2 12	[more]
AT3G14230.1	2.9e-20	49.09	related to AP2 2	[more]
AT5G44210.1	3.8e-20	64.86	erf domain protein 9	[more]
AT1G12980.1	2.4e-19	69.35	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Carg23125 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M8M5\|ERF84_ARATH	7.0e-32	44.83	Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9SSA8\|RA212_ARATH	6.1e-20	51.96	Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9LUM4\|RAP22_ARATH	5.2e-19	49.09	Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9FE67\|ERF80_ARATH	6.8e-19	64.86	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
sp\|Q9LW49\|ERF4_NICSY	3.4e-18	59.30	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]

BLAST of Carg23125 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KA16\|A0A0A0KA16_CUCSA	2.6e-63	72.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432130 PE=4 SV=1	[more]
tr\|B9SWS6\|B9SWS6_RICCO	4.2e-42	56.22	DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0010830 PE=4 S...	[more]
tr\|A0A067KL79\|A0A067KL79_JATCU	1.0e-40	59.43	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06067 PE=4 SV=1	[more]
tr\|A0A2N9F687\|A0A2N9F687_FAGSY	3.0e-40	54.95	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12597 PE=4 SV=1	[more]
tr\|A0A0D2NQ20\|A0A0D2NQ20_GOSRA	3.0e-40	50.46	Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_006G1...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23125-RA	Carg23125-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 85..101 score: 71.23 coord: 63..74 score: 70.15
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 62..125 e-value: 6.3E-33 score: 125.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 62..111 e-value: 1.8E-14 score: 53.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 62..119 score: 22.866
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 61..119 e-value: 1.4542E-15 score: 66.9115
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 61..121 e-value: 1.1E-29 score: 104.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..153
None	No IPR available	PANTHER	PTHR31677:SF38	SUBFAMILY NOT NAMED	coord: 56..186
None	No IPR available	PANTHER	PTHR31677	FAMILY NOT NAMED	coord: 56..186
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 62..120

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23125	Cla015336	Watermelon (97103) v1	carwmB0139
Carg23125	Csa7G432130	Cucumber (Chinese Long) v2	carcuB0160
Carg23125	MELO3C023454	Melon (DHL92) v3.5.1	carmeB0148
Carg23125	ClCG09G003190	Watermelon (Charleston Gray)	carwcgB0140
Carg23125	CSPI07G20240	Wild cucumber (PI 183967)	carcpiB0166
Carg23125	Cucsa.105790	Cucumber (Gy14) v1	carcgyB0179
Carg23125	CmaCh08G005990	Cucurbita maxima (Rimu)	carcmaB0193
Carg23125	CmaCh17G008840	Cucurbita maxima (Rimu)	carcmaB0192
Carg23125	CmoCh08G005920	Cucurbita moschata (Rifu)	carcmoB0199
Carg23125	CmoCh17G008540	Cucurbita moschata (Rifu)	carcmoB0198
Carg23125	Lsi02G026790	Bottle gourd (USVL1VR-Ls)	carlsiB130
Carg23125	Cp4.1LG12g07430	Cucurbita pepo (Zucchini)	carcpeB0209
Carg23125	Cp4.1LG17g08830	Cucurbita pepo (Zucchini)	carcpeB0210
Carg23125	CsGy7G018520	Cucumber (Gy14) v2	carcgybB0158
Carg23125	MELO3C023454.2	Melon (DHL92) v3.6.1	carmedB0151
Carg23125	CsaV3_7G032030	Cucumber (Chinese Long) v3	carcucB0167
Carg23125	Cla97C09G165430	Watermelon (97103) v2	carwmbB0152
Carg23125	Bhi09G000418	Wax gourd	carwgoB0185

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23125	Carg09609	Silver-seed gourd	carcarB170

The following block(s) are covering this gene:

None