Carg09609 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09609
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ethylene-responsive transcription factor
Location	Cucurbita_argyrosperma_scaffold_029 : 1047239 .. 1047739 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAACAATCCTCCAATTCCTTCTCTTCACGAAGCCGTCTCCGAACCCCAGCTGGACGGAATCGCCGCCGTCGTGGGCTGGAAAGTTCTCCTCGGCGACATAGTTCCAGCCTCAGCCACCGGGTTGAAGACGGCGGCAGCGGCAACAGGGCAGAGGAGTTACAGAGGAGTACGGAAGCGGCCATGGGGAAGATGGTCTGCAGAGATACGAGACCGAATAGGACGATGCCGGCACTGGCTGGGGACATTCGACACAGCGGAGGAAGCGGCGCGTGCATACGACGCAGCGGCGAGGCGATTGAGAGGATCGAAAGCGAGAACTAACTTCGAAATGCCGTGGATTGTACCGGTGGAATCCACGTCATCATTACCCATTTCATCGAAACAGAATCGTAACGGTAATAAGTTGAAGAAGAATGGCCGGAAATGCTCGGTGGTTACGTCGGCGGCGCATTTGTTCAGTCCGGGATTGGAGCTTGATTTGATCAACGCCGATTAA

mRNA sequence

ATGATTAACAATCCTCCAATTCCTTCTCTTCACGAAGCCGTCTCCGAACCCCAGCTGGACGGAATCGCCGCCGTCGTGGGCTGGAAAGTTCTCCTCGGCGACATAGTTCCAGCCTCAGCCACCGGGTTGAAGACGGCGGCAGCGGCAACAGGGCAGAGGAGTTACAGAGGAGTACGGAAGCGGCCATGGGGAAGATGGTCTGCAGAGATACGAGACCGAATAGGACGATGCCGGCACTGGCTGGGGACATTCGACACAGCGGAGGAAGCGGCGCGTGCATACGACGCAGCGGCGAGGCGATTGAGAGGATCGAAAGCGAGAACTAACTTCGAAATGCCGTGGATTGTACCGGTGGAATCCACGTCATCATTACCCATTTCATCGAAACAGAATCGTAACGGTAATAAGTTGAAGAAGAATGGCCGGAAATGCTCGGTGGTTACGTCGGCGGCGCATTTGTTCAGTCCGGGATTGGAGCTTGATTTGATCAACGCCGATTAA

Coding sequence (CDS)

ATGATTAACAATCCTCCAATTCCTTCTCTTCACGAAGCCGTCTCCGAACCCCAGCTGGACGGAATCGCCGCCGTCGTGGGCTGGAAAGTTCTCCTCGGCGACATAGTTCCAGCCTCAGCCACCGGGTTGAAGACGGCGGCAGCGGCAACAGGGCAGAGGAGTTACAGAGGAGTACGGAAGCGGCCATGGGGAAGATGGTCTGCAGAGATACGAGACCGAATAGGACGATGCCGGCACTGGCTGGGGACATTCGACACAGCGGAGGAAGCGGCGCGTGCATACGACGCAGCGGCGAGGCGATTGAGAGGATCGAAAGCGAGAACTAACTTCGAAATGCCGTGGATTGTACCGGTGGAATCCACGTCATCATTACCCATTTCATCGAAACAGAATCGTAACGGTAATAAGTTGAAGAAGAATGGCCGGAAATGCTCGGTGGTTACGTCGGCGGCGCATTTGTTCAGTCCGGGATTGGAGCTTGATTTGATCAACGCCGATTAA

Protein sequence

MINNPPIPSLHEAVSEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAAATGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPWIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD

Homology

[Close]

BLAST of Carg09609 vs. NCBI nr
Match: XP_022953923.1 (ethylene-responsive transcription factor ERF084-like [Cucurbita moschata])

HSP 1 Score: 329.3 bits (843), Expect = 7.4e-87
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MINNPPIPSLHEAVSEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAAATGQRSYRGVRK 60
           MINNPPIPSLH+AVSEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAAATGQRSYRGVRK
Sbjct: 1   MINNPPIPSLHDAVSEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAAATGQRSYRGVRK 60

Query: 61  RPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPWIVPVES 120
           RPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMP IVPVES
Sbjct: 61  RPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPLIVPVES 120

Query: 121 TSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD 167
           TSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
Sbjct: 121 TSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD 166

[Close]

BLAST of Carg09609 vs. NCBI nr
Match: XP_023548449.1 (ethylene-responsive transcription factor ERF084-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.7 bits (831), Expect = 1.8e-85
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MINNPPIPSLHEAVSEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAAATGQRSYRGVRK 60
           MINNPPIPSLH+AVSEPQLDGIAAVVGWKVLLGDIVPASATGLKTAA ATGQRSYRGVRK
Sbjct: 1   MINNPPIPSLHDAVSEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAEATGQRSYRGVRK 60

Query: 61  RPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPWIVPVES 120
           RPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKA+TNFEMP IVPVES
Sbjct: 61  RPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKAKTNFEMPLIVPVES 120

Query: 121 TSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD 167
           TSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLE DLINAD
Sbjct: 121 TSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLEFDLINAD 166

[Close]

BLAST of Carg09609 vs. NCBI nr
Match: XP_022991786.1 (ethylene-responsive transcription factor ERF084-like [Cucurbita maxima])

HSP 1 Score: 287.0 bits (733), Expect = 4.2e-74
Identity = 144/156 (92.31%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MINNPPIPSLHEAVSEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAAATGQRSYRGVRK 60
           MIN P IPSLH+AVSEPQLDGIAAVVGWKVLLGDIV ASATGLKTAA ATGQ SYRGVRK
Sbjct: 1   MINIPSIPSLHDAVSEPQLDGIAAVVGWKVLLGDIVTASATGLKTAATATGQMSYRGVRK 60

Query: 61  RPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPWIVPVES 120
           RPWGRWSAEIRD+IGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMP IVPVES
Sbjct: 61  RPWGRWSAEIRDQIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPLIVPVES 120

Query: 121 TSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSP 157
           TSSLPISSK+NRNGN LKKNGRKCSVVTS AHLF P
Sbjct: 121 TSSLPISSKKNRNGNLLKKNGRKCSVVTSVAHLFRP 156

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BLAST of Carg09609 vs. NCBI nr
Match: KGN45232.1 (hypothetical protein Csa_7G432130 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 2.5e-58
Identity = 126/172 (73.26%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 1   MINNPPIPSL------HEAVSEPQLDGIAAVVGWKVLLGDIVPA---SATGLKTAAAATG 60
           MIN  PIP L      H    + QLDGIAAVVG +VL GD  P    S++     A  TG
Sbjct: 1   MINTHPIPPLYNTFFPHSPPPDSQLDGIAAVVGRQVLFGDNRPTPTKSSSSTSATAPTTG 60

Query: 61  QRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFE 120
           QRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFE
Sbjct: 61  QRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFE 120

Query: 121 MPWIVPVESTSSLPISSKQ-NRNGNKLKKNGRKCSVVTSAAHLFSPGLELDL 163
           MP +VP+ESTS+   SS +  RNGNKLKKN RKCSVVTSAAHLFSPG+ELDL
Sbjct: 121 MPLVVPMESTSAWSTSSVEVKRNGNKLKKNDRKCSVVTSAAHLFSPGVELDL 172

[Close]

BLAST of Carg09609 vs. NCBI nr
Match: XP_022960429.1 (ethylene-responsive transcription factor ERF084-like [Cucurbita moschata])

HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50
Identity = 120/180 (66.67%), Postives = 131/180 (72.78%), Query Frame = 0


Query: 1   MINNPPIPSLHEAV----------SEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAAAT 60
           MI++ PI SL+ A            + QLDGIAAVVG KVL GDI P S +G KT  A T
Sbjct: 1   MISDQPIDSLYRAFFQTQFSQSPPPDSQLDGIAAVVGRKVLFGDI-PPSTSGSKT-PAVT 60

Query: 61  GQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120
           GQ+SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF
Sbjct: 61  GQKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 120

Query: 121 EMPWIVPVESTS----SLPISSKQNRNGNKL----KKNGRKCSVVTSAAHLFSPGLELDL 163
           EMP +VP+ESTS                 KL    K NGRKC+VVT+AAHLFS G+ELDL
Sbjct: 121 EMPLVVPLESTSXXXXXXXXXXXXXXXXXKLKAVKKPNGRKCAVVTTAAHLFSRGMELDL 178

[Close]

BLAST of Carg09609 vs. TAIR10
Match: AT1G80580.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31
Identity = 78/143 (54.55%), Postives = 86/143 (60.14%), Query Frame = 0


Query: 20  DGIAAVVGWKVLLGDIVPASATGLKTAAAATGQR------SYRGVRKRPWGRWSAEIRDR 79
           D IAAVVG  VL GD    S    K      G++       + GVRKRPWGRWSAEIRDR
Sbjct: 75  DSIAAVVGENVLFGDKNKVSDHLTKEGGVKRGRKMPQKTGGFMGVRKRPWGRWSAEIRDR 134

Query: 80  IGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPWIVPVESTSS--LPISSKQN 139
           IGRCRHWLGTFDTAEEAARAYDAAARRLRG+KA+TNF +P + P E   +          
Sbjct: 135 IGRCRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNFVIPPLFPKEIAQAXXXXXXXXXX 194

Query: 140 RNGNKLKKNGRKCSVVTSAAHLF 155
                     RKC  VTS A LF
Sbjct: 195 XXXXXXXXXXRKCVKVTSVAQLF 217

[Close]

BLAST of Carg09609 vs. TAIR10
Match: AT3G14230.1 (related to AP2 2)

HSP 1 Score: 96.3 bits (238), Expect = 1.9e-20
Identity = 53/119 (44.54%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 39  SATGLKTAAAATGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAA 98
           SA   + ++    +  YRG+R+RPWG+W+AEIRD     R WLGTFDTAEEAARAYDAAA
Sbjct: 112 SAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAA 171

Query: 99  RRLRGSKARTNFEMPWIVPVESTSSLPISSKQNRNGNKLKKN----GRKCSVVTSAAHL 154
           RR+RG+KA+ NF      P E   S+    + +   N L+K+     +  ++V    HL
Sbjct: 172 RRIRGTKAKVNF------PEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHL 224

[Close]

BLAST of Carg09609 vs. TAIR10
Match: AT1G12980.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 7.3e-20
Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 41  TGLKTAAAATGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARR 100
           T +  A A +    YRGVR+RPWGR++AEIRD + + R WLGTFDTAE+AA AYD+AAR 
Sbjct: 43  TTVTIAGAGSSTTRYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARA 102

Query: 101 LRGSKARTNFEMPWIV 117
            RG+KARTNF  P  V
Sbjct: 103 FRGAKARTNFTYPTAV 118

[Close]

BLAST of Carg09609 vs. TAIR10
Match: AT5G44210.1 (erf domain protein 9)

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-19
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 35  IVPASATGLKTAAAATGQRS--YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAAR 94
           I  +   G KT    T ++   +RGVRKRPWGR++AEIRD   + R WLGTFDTAEEAAR
Sbjct: 11  IAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAAR 70

Query: 95  AYDAAARRLRGSKARTNFEMP 114
           AYD AAR  RGSKA+TNF +P
Sbjct: 71  AYDTAAREFRGSKAKTNFPLP 91

[Close]

BLAST of Carg09609 vs. TAIR10
Match: AT1G53910.1 (related to AP2 12)

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-19
Identity = 48/82 (58.54%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 33  GDIVPASATGLKTAAAATGQR----SYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAE 92
           G +     TGL   A  +  R     YRG+R+RPWG+W+AEIRD     R WLGTF TAE
Sbjct: 99  GSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAE 158

Query: 93  EAARAYDAAARRLRGSKARTNF 111
           EAARAYDAAARR+RGSKA+ NF
Sbjct: 159 EAARAYDAAARRIRGSKAKVNF 180

[Close]

BLAST of Carg09609 vs. Swiss-Prot
Match: sp|Q9M8M5|ERF84_ARATH (Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana OX=3702 GN=ERF084 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-30
Identity = 78/143 (54.55%), Postives = 86/143 (60.14%), Query Frame = 0


Query: 20  DGIAAVVGWKVLLGDIVPASATGLKTAAAATGQR------SYRGVRKRPWGRWSAEIRDR 79
           D IAAVVG  VL GD    S    K      G++       + GVRKRPWGRWSAEIRDR
Sbjct: 75  DSIAAVVGENVLFGDKNKVSDHLTKEGGVKRGRKMPQKTGGFMGVRKRPWGRWSAEIRDR 134

Query: 80  IGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPWIVPVESTSS--LPISSKQN 139
           IGRCRHWLGTFDTAEEAARAYDAAARRLRG+KA+TNF +P + P E   +          
Sbjct: 135 IGRCRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNFVIPPLFPKEIAQAXXXXXXXXXX 194

Query: 140 RNGNKLKKNGRKCSVVTSAAHLF 155
                     RKC  VTS A LF
Sbjct: 195 XXXXXXXXXXRKCVKVTSVAQLF 217

[Close]

BLAST of Carg09609 vs. Swiss-Prot
Match: sp|Q9SXS8|ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-19
Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 37  PASATGLKTAAAATGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDA 96
           PA  TG    +  + +  +RGVRKRPWGR++AEIRD   + R WLGTFD+AE+AARAYDA
Sbjct: 10  PAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDA 69

Query: 97  AARRLRGSKARTNFEMPW 115
           AAR LRG KA+TNF +P+
Sbjct: 70  AARALRGPKAKTNFPLPY 87

[Close]

BLAST of Carg09609 vs. Swiss-Prot
Match: sp|Q9LUM4|RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-19
Identity = 53/119 (44.54%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 39  SATGLKTAAAATGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAA 98
           SA   + ++    +  YRG+R+RPWG+W+AEIRD     R WLGTFDTAEEAARAYDAAA
Sbjct: 112 SAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAA 171

Query: 99  RRLRGSKARTNFEMPWIVPVESTSSLPISSKQNRNGNKLKKN----GRKCSVVTSAAHL 154
           RR+RG+KA+ NF      P E   S+    + +   N L+K+     +  ++V    HL
Sbjct: 172 RRIRGTKAKVNF------PEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHL 224

[Close]

BLAST of Carg09609 vs. Swiss-Prot
Match: sp|Q9SAD4|ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana OX=3702 GN=ESR1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18
Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 41  TGLKTAAAATGQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARR 100
           T +  A A +    YRGVR+RPWGR++AEIRD + + R WLGTFDTAE+AA AYD+AAR 
Sbjct: 43  TTVTIAGAGSSTTRYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARA 102

Query: 101 LRGSKARTNFEMPWIV 117
            RG+KARTNF  P  V
Sbjct: 103 FRGAKARTNFTYPTAV 118

[Close]

BLAST of Carg09609 vs. Swiss-Prot
Match: sp|Q9FE67|ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-18
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 35  IVPASATGLKTAAAATGQRS--YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAAR 94
           I  +   G KT    T ++   +RGVRKRPWGR++AEIRD   + R WLGTFDTAEEAAR
Sbjct: 11  IAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAAR 70

Query: 95  AYDAAARRLRGSKARTNFEMP 114
           AYD AAR  RGSKA+TNF +P
Sbjct: 71  AYDTAAREFRGSKAKTNFPLP 91

[Close]

BLAST of Carg09609 vs. TrEMBL
Match: tr|A0A0A0KA16|A0A0A0KA16_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432130 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.6e-58
Identity = 126/172 (73.26%), Postives = 135/172 (78.49%), Query Frame = 0


Query: 1   MINNPPIPSL------HEAVSEPQLDGIAAVVGWKVLLGDIVPA---SATGLKTAAAATG 60
           MIN  PIP L      H    + QLDGIAAVVG +VL GD  P    S++     A  TG
Sbjct: 1   MINTHPIPPLYNTFFPHSPPPDSQLDGIAAVVGRQVLFGDNRPTPTKSSSSTSATAPTTG 60

Query: 61  QRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFE 120
           QRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFE
Sbjct: 61  QRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFE 120

Query: 121 MPWIVPVESTSSLPISSKQ-NRNGNKLKKNGRKCSVVTSAAHLFSPGLELDL 163
           MP +VP+ESTS+   SS +  RNGNKLKKN RKCSVVTSAAHLFSPG+ELDL
Sbjct: 121 MPLVVPMESTSAWSTSSVEVKRNGNKLKKNDRKCSVVTSAAHLFSPGVELDL 172

[Close]

BLAST of Carg09609 vs. TrEMBL
Match: tr|A0A067KL79|A0A067KL79_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06067 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.9e-41
Identity = 102/173 (58.96%), Postives = 118/173 (68.21%), Query Frame = 0


Query: 15  SEPQLDGIAAVVGWKVLLGDIVPASATGLKTAAA-----------------ATG---QRS 74
           S P LDGIAAVVG  +L G    A+   L+T+ +                  TG   QRS
Sbjct: 85  SLPVLDGIAAVVGQHILFGTNTSANGKNLETSISQRTGSKTTNHEDDGHRKVTGMPMQRS 144

Query: 75  YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPW 134
           YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG+KARTNFE+P 
Sbjct: 145 YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFEIPS 204

Query: 135 IVPVES-TSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD 167
           ++P+ S TSS   +  + RN NK    G+KC+VVTS AHLFS     D+IN +
Sbjct: 205 VLPISSPTSSGSSTEVRKRNSNK-GNGGKKCAVVTSVAHLFS-----DIINTN 251

[Close]

BLAST of Carg09609 vs. TrEMBL
Match: tr|B9SWS6|B9SWS6_RICCO (DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0010830 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.0e-39
Identity = 100/179 (55.87%), Postives = 116/179 (64.80%), Query Frame = 0


Query: 10  LHEAVSEPQLDGIAAVVGWKVLLGDIVPA-----------SATGLKT--------AAAAT 69
           + E  S P LDGIAAVVG  VL G    A             TG +              
Sbjct: 90  IKETESPPILDGIAAVVGEHVLFGTSADAPKPQSQEPSISQRTGSRKKDGEIHGGGRGVG 149

Query: 70  GQRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNF 129
           GQR+YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG+KARTNF
Sbjct: 150 GQRTYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNF 209

Query: 130 EMPWIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSP-------GLELDL 163
           E+P +VP+  +    ++  + RN +K+  +GRKC+VVTS AHLFS         +ELDL
Sbjct: 210 EIPSVVPISGS----LNEVKKRN-SKVSSSGRKCAVVTSVAHLFSDTSCNISNNVELDL 263

[Close]

BLAST of Carg09609 vs. TrEMBL
Match: tr|A0A2C9V0E9|A0A2C9V0E9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G062900 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 8.5e-39
Identity = 95/159 (59.75%), Postives = 107/159 (67.30%), Query Frame = 0


Query: 17  PQLDGIAAVVGWKVLLGDIVPASA----------TGLKTAAAATG---------QRSYRG 76
           P LDGIAAVVG  VL G     +           TG KT               QR+YRG
Sbjct: 107 PVLDGIAAVVGQHVLFGTNATVNVRNPEPSISQRTGSKTNHEDDSQRKDNVMPLQRTYRG 166

Query: 77  VRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEMPWIVP 136
           VRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRG+KARTNFE+P ++P
Sbjct: 167 VRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFEIPSVLP 226

Query: 137 VESTSSLPISSKQNRNGNKLKK-NGRKCSVVTSAAHLFS 156
           + S +S   S++  +  NK     GRKC+VVTS AHLFS
Sbjct: 227 IPSPTSSGSSTEVRKRNNKTNNGTGRKCAVVTSVAHLFS 265

[Close]

BLAST of Carg09609 vs. TrEMBL
Match: tr|A0A218WAN8|A0A218WAN8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr014054 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.5e-38
Identity = 98/171 (57.31%), Postives = 110/171 (64.33%), Query Frame = 0


Query: 12  EAVSEPQLDGIAAVVGWKVLLG--DIVPASATGLKTAAAATG------------------ 71
           EA + P LDGIAAVVG  VL G  D   A  + L + +   G                  
Sbjct: 69  EADAAPPLDGIAAVVGEHVLFGKKDSEQADESHLPSISRCLGPMRPQKRQVSEERRRTAA 128

Query: 72  -------QRSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGS 131
                  Q++YRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGS
Sbjct: 129 VEGNVSVQKNYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGS 188

Query: 132 KARTNFEMPWIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFS 156
           KARTNFE+P IVP+ + SS P +   +R   +    GRKCSVVTS  HLFS
Sbjct: 189 KARTNFEIPPIVPLPALSS-PPALPGSRRRREAAGRGRKCSVVTSVEHLFS 238

The following BLAST results are available for this feature:

BLAST of Carg09609 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953923.1	7.4e-87	98.80	ethylene-responsive transcription factor ERF084-like [Cucurbita moschata]	[more]
XP_023548449.1	1.8e-85	96.99	ethylene-responsive transcription factor ERF084-like [Cucurbita pepo subsp. pepo...	[more]
XP_022991786.1	4.2e-74	92.31	ethylene-responsive transcription factor ERF084-like [Cucurbita maxima]	[more]
KGN45232.1	2.5e-58	73.26	hypothetical protein Csa_7G432130 [Cucumis sativus]	[more]
XP_022960429.1	1.5e-50	66.67	ethylene-responsive transcription factor ERF084-like [Cucurbita moschata]	[more]

BLAST of Carg09609 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80580.1	1.1e-31	54.55	Integrase-type DNA-binding superfamily protein	[more]
AT3G14230.1	1.9e-20	44.54	related to AP2 2	[more]
AT1G12980.1	7.3e-20	60.53	Integrase-type DNA-binding superfamily protein	[more]
AT5G44210.1	1.6e-19	60.49	erf domain protein 9	[more]
AT1G53910.1	2.1e-19	58.54	related to AP2 12	[more]

BLAST of Carg09609 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M8M5\|ERF84_ARATH	1.9e-30	54.55	Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9SXS8\|ERF3_TOBAC	2.0e-19	60.26	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
sp\|Q9LUM4\|RAP22_ARATH	3.4e-19	44.54	Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9SAD4\|ESR1_ARATH	1.3e-18	60.53	Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9FE67\|ERF80_ARATH	2.9e-18	60.49	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of Carg09609 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KA16\|A0A0A0KA16_CUCSA	1.6e-58	73.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432130 PE=4 SV=1	[more]
tr\|A0A067KL79\|A0A067KL79_JATCU	6.9e-41	58.96	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06067 PE=4 SV=1	[more]
tr\|B9SWS6\|B9SWS6_RICCO	1.0e-39	55.87	DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0010830 PE=4 S...	[more]
tr\|A0A2C9V0E9\|A0A2C9V0E9_MANES	8.5e-39	59.75	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G062900 PE=4 SV=...	[more]
tr\|A0A218WAN8\|A0A218WAN8_PUNGR	5.5e-38	57.31	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr014054 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09609-RA	Carg09609-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 55..66 score: 70.15 coord: 77..93 score: 71.23
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 54..120 e-value: 1.6E-31 score: 120.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 54..103 e-value: 1.5E-14 score: 53.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 54..111 score: 22.866
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 55..111 e-value: 3.14678E-15 score: 65.7559
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 53..112 e-value: 2.7E-29 score: 102.8
None	No IPR available	PANTHER	PTHR31677	FAMILY NOT NAMED	coord: 49..156
None	No IPR available	PANTHER	PTHR31677:SF38	SUBFAMILY NOT NAMED	coord: 49..156
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 55..112

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09609	Cla015336	Watermelon (97103) v1	carwmB1028
Carg09609	Csa7G432130	Cucumber (Chinese Long) v2	carcuB1041
Carg09609	MELO3C023454	Melon (DHL92) v3.5.1	carmeB0996
Carg09609	ClCG09G003190	Watermelon (Charleston Gray)	carwcgB1001
Carg09609	CSPI07G20240	Wild cucumber (PI 183967)	carcpiB1064
Carg09609	Cucsa.105790	Cucumber (Gy14) v1	carcgyB1144
Carg09609	CmaCh08G005990	Cucurbita maxima (Rimu)	carcmaB1425
Carg09609	CmaCh17G008840	Cucurbita maxima (Rimu)	carcmaB1419
Carg09609	CmoCh17G008540	Cucurbita moschata (Rifu)	carcmoB1376
Carg09609	CmoCh08G005920	Cucurbita moschata (Rifu)	carcmoB1379
Carg09609	Lsi02G026790	Bottle gourd (USVL1VR-Ls)	carlsiB937
Carg09609	Cp4.1LG12g07430	Cucurbita pepo (Zucchini)	carcpeB1424
Carg09609	CsGy7G018520	Cucumber (Gy14) v2	carcgybB1011
Carg09609	MELO3C023454.2	Melon (DHL92) v3.6.1	carmedB1008
Carg09609	CsaV3_7G032030	Cucumber (Chinese Long) v3	carcucB1074
Carg09609	Cla97C09G165430	Watermelon (97103) v2	carwmbB1089
Carg09609	Bhi09G000418	Wax gourd	carwgoB1203

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09609	Carg23125	Silver-seed gourd	carcarB170

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09609	Cucurbita pepo (Zucchini)	carcpeB1425