Carg22755 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAGGTCGCCGTTCGCGTCGTCTGTAATTTATTATTTACTTTAATTCTCTTTAATATTTATTCAGATTTTTTCAACCTTTTCTTCGTCCGTCGTTTTCATCCTTTATTATTATTATTATTATTATTATTATTATATTATTATTATTAAATTTGGAAGTGTTTAGGAAAGAAAATTCGTGTTTTTTAAAGTAATTTATTTGAATCTTTGATTTTAATTTTCTATTAATCAGGAGAAAGTTATTGTAGGAATATTTAAACTTAAAATAATTATTTAAACTCAAAGTAAAAATAAAATAGAATAAAAAGAAGAGGACTGTAATGCAAAACACAGGTGATTCGAGGGGGGCAATGCAATTATTAAGAAATTATCCCGAAAAGGAAAAAGAAAAAAAACGTAAATGAAGCGAAAAGGTCAAGAAGGCGAAATTCAATGCCAAGTCAGTGGGACCCGCAACGGACTTCAAATCTTACATTTAAATTTAGTTAAATGAATAAATAAATAAATAACTATTACCAAATATATATATATTTATTTTAAAAAAGAAATTGAAAAAGAGGAGCAGAATCATTGAAAACAAACACAGAGGATAAAATTGGAAGAAAGAAAAGGTGGGAACACGGCGACCGAGAATGGATTTTCTAAACCCTCTCTTTATTCGACACGTGTCCTTCTCTTTTATGTCTCTGTTTCCGCTCTTTTTAAACGTCGCCCCCTCCCATTTCTAGTCTCTCACACCACTTCTGCAACCATTCCTTCATTCTGTTCTCTCTAATGGCGGTTTAACCTTTAAAGCCCTAATTCTTCTTCTTCTTCTTCTTCTTCTATCTATTTCCTTCTTCTTCCATGGAAAATTGCACCGACAACAGAAAGCGAGATCGCGACGAGTTAGACGTCTCGCTTGCCGATTCGGCCGGGTCGAAGCTCAGACGACTCAACTCAATGGAATCGAGATTTGTAAAGCCATGCTCCAAGTCGGAGCAGGTAGATTCCGATGGAGGTGATTTGAGAATCGATTTGGCAGATTCGGATGAGATTCAGGATAAGTTGCTGAACATCCTTGAAGATTGCGACGTTGTTGCGGAGCGAGATGAGAGTATTCAAGGTTTTGAACTCGATTCGTTTATCCGAAGCTTCGAGGAGGAGATTCATGCCCTACCGCCGGCGGAAACGTCGTCGAATCAGAATGAGACTCCTCAGGCGGAACTCGGATATCTTTTTGAGGCGTCGGATGATGAACTCGGCCTGCCGCCGACTGTAGGTTCGAGTAATGAGGGGAAGATCGAGGCGATTGATTTTACGCCGGCTTGTTCTTGGCCTGGTGTGTTCGAGATGGATGGGAATGTAGGGTTTGAAGATGAGATACCGTGTTATGACTCGTTTGAGATTGGAATCGGCATTGGTTCCGGCGCGGCGGAGGAGAACGGGTTGGTTGGGGAGTTTGTTGCATTGGGCGGTTTGTTTGATTACTCGGACGTGCCGTTTCGACCGGAGTCGTTGTCGGCTTTGTAG ATGGATAAGTTGCTGAACATCCTTGAAGATTGCGACGTTGTTGCGGAGCGAGATGAGAGTATTCAAGGTTTTGAACTCGATTCGTTTATCCGAAGCTTCGAGGAGGAGATTCATGCCCTACCGCCGGCGGAAACGTCGTCGAATCAGAATGAGACTCCTCAGGCGGAACTCGGATATCTTTTTGAGGCGTCGGATGATGAACTCGGCCTGCCGCCGACTGTAGGTTCGAGTAATGAGGGGAAGATCGAGGCGATTGATTTTACGCCGGCTTGTTCTTGGCCTGGTGTGTTCGAGATGGATGGGAATGTAGGGTTTGAAGATGAGATACCGTGTTATGACTCGTTTGAGATTGGAATCGGCATTGGTTCCGGCGCGGCGGAGGAGAACGGGTTGGTTGGGGAGTTTGTTGCATTGGGCGGTTTGTTTGATTACTCGGACGTGCCGTTTCGACCGGAGTCGTTGTCGGCTTTGTAG ATGGATAAGTTGCTGAACATCCTTGAAGATTGCGACGTTGTTGCGGAGCGAGATGAGAGTATTCAAGGTTTTGAACTCGATTCGTTTATCCGAAGCTTCGAGGAGGAGATTCATGCCCTACCGCCGGCGGAAACGTCGTCGAATCAGAATGAGACTCCTCAGGCGGAACTCGGATATCTTTTTGAGGCGTCGGATGATGAACTCGGCCTGCCGCCGACTGTAGGTTCGAGTAATGAGGGGAAGATCGAGGCGATTGATTTTACGCCGGCTTGTTCTTGGCCTGGTGTGTTCGAGATGGATGGGAATGTAGGGTTTGAAGATGAGATACCGTGTTATGACTCGTTTGAGATTGGAATCGGCATTGGTTCCGGCGCGGCGGAGGAGAACGGGTTGGTTGGGGAGTTTGTTGCATTGGGCGGTTTGTTTGATTACTCGGACGTGCCGTTTCGACCGGAGTCGTTGTCGGCTTTGTAG MDKLLNILEDCDVVAERDESIQGFELDSFIRSFEEEIHALPPAETSSNQNETPQAELGYLFEASDDELGLPPTVGSSNEGKIEAIDFTPACSWPGVFEMDGNVGFEDEIPCYDSFEIGIGIGSGAAEENGLVGEFVALGGLFDYSDVPFRPESLSAL
BLAST of Carg22755 vs. NCBI nr
Match: XP_022954576.1 (uncharacterized protein LOC111456805 [Cucurbita moschata]) HSP 1 Score: 312.4 bits (799), Expect = 8.8e-82 Identity = 154/156 (98.72%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of Carg22755 vs. NCBI nr
Match: XP_022994085.1 (uncharacterized protein LOC111489916 [Cucurbita maxima]) HSP 1 Score: 308.1 bits (788), Expect = 1.7e-80 Identity = 152/156 (97.44%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of Carg22755 vs. NCBI nr
Match: XP_023541956.1 (uncharacterized protein LOC111801944 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 306.2 bits (783), Expect = 6.3e-80 Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of Carg22755 vs. NCBI nr
Match: XP_022924029.1 (uncharacterized protein LOC111431577 [Cucurbita moschata]) HSP 1 Score: 245.0 bits (624), Expect = 1.7e-61 Identity = 127/158 (80.38%), Postives = 134/158 (84.81%), Query Frame = 0
BLAST of Carg22755 vs. NCBI nr
Match: XP_023519973.1 (uncharacterized protein LOC111783283 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 245.0 bits (624), Expect = 1.7e-61 Identity = 126/158 (79.75%), Postives = 135/158 (85.44%), Query Frame = 0
BLAST of Carg22755 vs. TAIR10
Match: AT1G13360.1 (unknown protein) HSP 1 Score: 72.0 bits (175), Expect = 3.6e-13 Identity = 58/149 (38.93%), Postives = 76/149 (51.01%), Query Frame = 0
BLAST of Carg22755 vs. TAIR10
Match: AT3G25870.1 (unknown protein) HSP 1 Score: 52.8 bits (125), Expect = 2.3e-07 Identity = 47/141 (33.33%), Postives = 65/141 (46.10%), Query Frame = 0
BLAST of Carg22755 vs. TrEMBL
Match: tr|A0A0A0LQD5|A0A0A0LQD5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042270 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 2.0e-50 Identity = 118/165 (71.52%), Postives = 136/165 (82.42%), Query Frame = 0
BLAST of Carg22755 vs. TrEMBL
Match: tr|A0A2P4KPA4|A0A2P4KPA4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_78493 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32 Identity = 91/170 (53.53%), Postives = 110/170 (64.71%), Query Frame = 0
BLAST of Carg22755 vs. TrEMBL
Match: tr|A0A2N9EEW7|A0A2N9EEW7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1167 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31 Identity = 84/159 (52.83%), Postives = 103/159 (64.78%), Query Frame = 0
BLAST of Carg22755 vs. TrEMBL
Match: tr|A0A2P6P3M3|A0A2P6P3M3_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0185281 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.7e-28 Identity = 90/173 (52.02%), Postives = 109/173 (63.01%), Query Frame = 0
BLAST of Carg22755 vs. TrEMBL
Match: tr|A0A2P5AJV3|A0A2P5AJV3_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_325240 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.5e-26 Identity = 89/173 (51.45%), Postives = 105/173 (60.69%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|