Csa1G042270 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G042270
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 4207902 .. 4208621 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAATTTCTCCGAGGATAGAAAGCGAGTTCACGACGAGTTAGACGATGACTCGTTGGCCGATTCTGCCGAGTCCAAGCTTAGAAGACTCAACTCATCGGATTTGAGAATTGGGAAGCCATGCACTAAGGAGGATTTCAATGTTGTCCAAGGTTCATCTGCTATTGCTGGTGATTTGAATATTGATGATTTGGTGGAATCTGAGGAGATTCAGGATGAGTTGTTACTCAATATTCTTGAAGATTCAGACGTGGTAGCGGAGCGAGATGAGAGTGCTATTGAAGGTCTTGAACTTGATTCGTTTATTAAAAGCTTTGAGGAAGAGATTCAAGGCGTCCCCTCGTCGGTGGATGATCAGAATAATAATAATGAAACCCCTCAAGCGGAACTCGGGTATTTATTTGGGGCGTCGGATGATGAGTTAGGGTTACCGCCGAGTGGAGGTTTGAGTAGTACTACGGAAGGGAAGAAGATGGAGGCCATTGATTTTATGCCTCCTGCTTCTTCTTGTTCTCCTGATGTGTTCGAGTTGGAAGGAAAGTTGGGGTTTGATGATGACATTCCGTGTTACGACTCGTTCGAGTTGGGAATGGGGATTGGTTCCGGTGCGGCGGTGGCGGAGGACAATGGGTTGGGCGGTGGAGAGTTTGTTGCATTGGGTGGTTTGTTTGATTATTCCGACGTGCTGTTTCGGCCGGAGTCTTTACCGGCTTTGTAG

mRNA sequence

ATGGATAATTTCTCCGAGGATAGAAAGCGAGTTCACGACGAGTTAGACGATGACTCGTTGGCCGATTCTGCCGAGTCCAAGCTTAGAAGACTCAACTCATCGGATTTGAGAATTGGGAAGCCATGCACTAAGGAGGATTTCAATGTTGTCCAAGGTTCATCTGCTATTGCTGGTGATTTGAATATTGATGATTTGGTGGAATCTGAGGAGATTCAGGATGAGTTGTTACTCAATATTCTTGAAGATTCAGACGTGGTAGCGGAGCGAGATGAGAGTGCTATTGAAGGTCTTGAACTTGATTCGTTTATTAAAAGCTTTGAGGAAGAGATTCAAGGCGTCCCCTCGTCGGTGGATGATCAGAATAATAATAATGAAACCCCTCAAGCGGAACTCGGGTATTTATTTGGGGCGTCGGATGATGAGTTAGGGTTACCGCCGAGTGGAGGTTTGAGTAGTACTACGGAAGGGAAGAAGATGGAGGCCATTGATTTTATGCCTCCTGCTTCTTCTTGTTCTCCTGATGTGTTCGAGTTGGAAGGAAAGTTGGGGTTTGATGATGACATTCCGTGTTACGACTCGTTCGAGTTGGGAATGGGGATTGGTTCCGGTGCGGCGGTGGCGGAGGACAATGGGTTGGGCGGTGGAGAGTTTGTTGCATTGGGTGGTTTGTTTGATTATTCCGACGTGCTGTTTCGGCCGGAGTCTTTACCGGCTTTGTAG

Coding sequence (CDS)

ATGGATAATTTCTCCGAGGATAGAAAGCGAGTTCACGACGAGTTAGACGATGACTCGTTGGCCGATTCTGCCGAGTCCAAGCTTAGAAGACTCAACTCATCGGATTTGAGAATTGGGAAGCCATGCACTAAGGAGGATTTCAATGTTGTCCAAGGTTCATCTGCTATTGCTGGTGATTTGAATATTGATGATTTGGTGGAATCTGAGGAGATTCAGGATGAGTTGTTACTCAATATTCTTGAAGATTCAGACGTGGTAGCGGAGCGAGATGAGAGTGCTATTGAAGGTCTTGAACTTGATTCGTTTATTAAAAGCTTTGAGGAAGAGATTCAAGGCGTCCCCTCGTCGGTGGATGATCAGAATAATAATAATGAAACCCCTCAAGCGGAACTCGGGTATTTATTTGGGGCGTCGGATGATGAGTTAGGGTTACCGCCGAGTGGAGGTTTGAGTAGTACTACGGAAGGGAAGAAGATGGAGGCCATTGATTTTATGCCTCCTGCTTCTTCTTGTTCTCCTGATGTGTTCGAGTTGGAAGGAAAGTTGGGGTTTGATGATGACATTCCGTGTTACGACTCGTTCGAGTTGGGAATGGGGATTGGTTCCGGTGCGGCGGTGGCGGAGGACAATGGGTTGGGCGGTGGAGAGTTTGTTGCATTGGGTGGTTTGTTTGATTATTCCGACGTGCTGTTTCGGCCGGAGTCTTTACCGGCTTTGTAG

Protein sequence

MDNFSEDRKRVHDELDDDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDLNIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQNNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEGKLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYSDVLFRPESLPAL*
Homology
[Close]
BLAST of Csa1G042270 vs. TrEMBL
Match: A0A0A0LQD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042270 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 4.3e-131
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1 

Query: 1   MDNFSEDRKRVHDELDDDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDL 60
           MDNFSEDRKRVHDELDDDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDL
Sbjct: 1   MDNFSEDRKRVHDELDDDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDL 60

Query: 61  NIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQ 120
           NIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQ
Sbjct: 61  NIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQ 120

Query: 121 NNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEG 180
           NNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEG
Sbjct: 121 NNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEG 180

Query: 181 KLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYSDVLFRPESLPAL 240
           KLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYSDVLFRPESLPAL
Sbjct: 181 KLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYSDVLFRPESLPAL 239

[Close]
BLAST of Csa1G042270 vs. TrEMBL
Match: M5WC72_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012428mg PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.1e-28
Identity = 97/184 (52.72%), Postives = 118/184 (64.13%), Query Frame = 1 

Query: 66  VESEE---IQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQNN 125
           +ESEE   IQD+LL NIL+DSD V +RD  AI+  +LDS IKSFEEEIQ     V +  +
Sbjct: 1   MESEEVKLIQDDLL-NILDDSDTVTDRDP-AIQ--DLDSVIKSFEEEIQVPAFPVSETTS 60

Query: 126 N-NETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEGK 185
           +   + Q ELGYL  ASDDELGLPP+ G S   E  K+EA DF    +S   +   L+G 
Sbjct: 61  SPGGSSQPELGYLLEASDDELGLPPTNGGS---EDGKLEAADF----TSSGSEAVGLDGM 120

Query: 186 LGFDDD-IPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDY-----SDVLFRPES 240
           LGF++D IP YDSFELG+G   G     +N  GG E+VALGGLFDY     SDV +R ES
Sbjct: 121 LGFENDIIPNYDSFELGIG---GDCNLNNNYNGGAEYVALGGLFDYSDGGVSDVSWRNES 170

[Close]
BLAST of Csa1G042270 vs. TrEMBL
Match: I1L4C8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G185200 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.9e-26
Identity = 95/243 (39.09%), Postives = 133/243 (54.73%), Query Frame = 1 

Query: 9   KRVHDELDDDSL--ADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDLNIDDLV 68
           KRV D+  D +    DS ESK+RR++SSD  I                  + +  ++ ++
Sbjct: 7   KRVWDQSSDSNTQRVDSPESKIRRVDSSDSGIN-----------------SSESQLESVL 66

Query: 69  ESEEIQ-DELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQNNNNE 128
           +S E+Q  + + N+L+D+D V ERD  +++GL  DS IKSFE+EI   P S     +  +
Sbjct: 67  DSSEVQLQDDIFNMLDDTDNVPERD--SVQGL--DSVIKSFEDEINA-PGSDSGSGDPAQ 126

Query: 129 TP-----QAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEG 188
            P     Q+ LGYL  ASDDELGLPP+ G     +G++M            +P++ EL  
Sbjct: 127 EPDSGELQSNLGYLLEASDDELGLPPTVG-----DGEEM---------GRAAPEMAELAR 186

Query: 189 KLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYS----DVLFRPESL 240
            +GF+DDIP YD+F    G GSG     D G GG  FV + GLFDYS    DVL+R ESL
Sbjct: 187 FVGFEDDIPSYDAF----GFGSGFTAENDGGAGG--FVTVDGLFDYSDPSADVLWRSESL 207

[Close]
BLAST of Csa1G042270 vs. TrEMBL
Match: K7L0J2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G090800 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25
Identity = 94/251 (37.45%), Postives = 132/251 (52.59%), Query Frame = 1 

Query: 3   NFSEDRKRVHDELD-----DDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIA 62
           +  E +KRV DE          L DS ES+ +R++S + +I +  + E            
Sbjct: 62  SMEESKKRVRDESSYSPESQTQLVDSPESESQRVDSPESKIRRVDSSES----------- 121

Query: 63  GDLNIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSV 122
               +D +++SE    + + NIL+D+D V ERD  +++GL  DS IKSFE+EI   P S 
Sbjct: 122 ---QLDSVLDSEVRLQDDIFNILDDADNVPERD--SVQGL--DSVIKSFEDEINA-PGSD 181

Query: 123 DDQNNNNETP-----QAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCS 182
               +  + P     Q+ LGYL  ASDDELGLPP+       +G++   +          
Sbjct: 182 SGSGDPTQEPDSGELQSNLGYLLEASDDELGLPPT-----VVDGEETGRV---------G 241

Query: 183 PDVFELEGKLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYS----D 240
           P++ EL   +GF+DDIP YD+F    G GSG A   D G GG  FV + GLFDYS    D
Sbjct: 242 PEMTELARLMGFEDDIPSYDAF----GFGSGFAAESDGGAGG--FVTVDGLFDYSDPAAD 273

[Close]
BLAST of Csa1G042270 vs. TrEMBL
Match: C6SZD6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25
Identity = 94/248 (37.90%), Postives = 131/248 (52.82%), Query Frame = 1 

Query: 6   EDRKRVHDELD-----DDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDL 65
           E +KRV DE          L DS ES+ +R++S + +I +  + E               
Sbjct: 3   ESKKRVRDESSYSPESQTQLVDSPESESQRVDSPESKIRRVDSSES-------------- 62

Query: 66  NIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQ 125
            +D +++SE    + + NIL+D+D V ERD  +++GL  DS IKSFE+EI   P S    
Sbjct: 63  QLDSVLDSEVRLQDDIFNILDDADNVPERD--SVQGL--DSVIKSFEDEINA-PGSDSGS 122

Query: 126 NNNNETP-----QAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDV 185
            +  + P     Q+ LGYL  ASDDELGLPP+       +G++   +          P++
Sbjct: 123 GDPTQEPDSGELQSNLGYLLEASDDELGLPPT-----VVDGEETGRV---------GPEM 182

Query: 186 FELEGKLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYS----DVLF 240
            EL   +GF+DDIP YD+F    G GSG A   D G GG  FV + GLFDYS    DVL+
Sbjct: 183 TELARLMGFEDDIPSYDAF----GFGSGFAAESDGGAGG--FVTVDGLFDYSDPAADVLW 211

[Close]
BLAST of Csa1G042270 vs. TAIR10
Match: AT1G13360.1 (AT1G13360.1 unknown protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-17
Identity = 61/199 (30.65%), Postives = 91/199 (45.73%), Query Frame = 1 

Query: 59  DLNIDDLVESEEIQDELLLNILEDS-----------DVVAERDESAIEGLELDSFIKSFE 118
           D+   D  E + ++DE     + DS           DV+ + D   +   +LDS +KSFE
Sbjct: 7   DITRTDSAEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQ-DLDSVMKSFE 66

Query: 119 EEIQGVPSSVDDQNNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPP 178
           +E+  V ++    ++     Q +LGYL  ASDDELGLPP   +S     K+    + +  
Sbjct: 67  DELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTD 126

Query: 179 ASSCSPDVFELEGKLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYS 238
               S D   ++   GF+D +  Y   + G G+G            GG++VA+ GLF++S
Sbjct: 127 LVRASSDSSGIDEIWGFEDHVSNYGGLDFGSGVGD-----------GGDYVAVEGLFEFS 186

[Close]
BLAST of Csa1G042270 vs. TAIR10
Match: AT3G25870.1 (AT3G25870.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09
Identity = 63/183 (34.43%), Postives = 89/183 (48.63%), Query Frame = 1 

Query: 64  DLVESEEIQDELLLNILEDSDVVAERDE----SAIEGL--ELDSFIKSFEEEIQGVPSSV 123
           D V ++ ++D L    L+  DV   RD+    S ++ +  +LDS +KSFE E+    +++
Sbjct: 13  DSVGNKRVRDGL---DLDSPDVKRLRDDLFDDSGLDPVSQDLDSVMKSFENELSTTTAAL 72

Query: 124 DDQNNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKM-EAIDFMPPASSCSPDVF 183
               ++ ET Q +LGYLF ASDDELGLPP      T       E +  +  ASS S +V 
Sbjct: 73  ----SSGET-QPDLGYLFEASDDELGLPPPLTPPQTLLPPSCEETVTELVRASSDSSEVG 132

Query: 184 ELEGKLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYSDVL-FRPES 239
           EL    GF+D +  +   +LG           D+GL    F    G  D  D+  +RPE 
Sbjct: 133 EL---CGFEDHVTEFGPCDLG-----------DDGL----FEYFDGCLDSGDLFSWRPEF 169

[Close]
BLAST of Csa1G042270 vs. NCBI nr
Match: gi|778664755|ref|XP_011660345.1| (PREDICTED: uncharacterized protein LOC105436376 [Cucumis sativus])

HSP 1 Score: 475.3 bits (1222), Expect = 6.2e-131
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1 

Query: 1   MDNFSEDRKRVHDELDDDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDL 60
           MDNFSEDRKRVHDELDDDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDL
Sbjct: 1   MDNFSEDRKRVHDELDDDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDL 60

Query: 61  NIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQ 120
           NIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQ
Sbjct: 61  NIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQ 120

Query: 121 NNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEG 180
           NNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEG
Sbjct: 121 NNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEG 180

Query: 181 KLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYSDVLFRPESLPAL 240
           KLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYSDVLFRPESLPAL
Sbjct: 181 KLGFDDDIPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDYSDVLFRPESLPAL 239

[Close]
BLAST of Csa1G042270 vs. NCBI nr
Match: gi|645270053|ref|XP_008240279.1| (PREDICTED: uncharacterized protein LOC103338800 [Prunus mume])

HSP 1 Score: 142.1 bits (357), Expect = 1.2e-30
Identity = 118/260 (45.38%), Postives = 147/260 (56.54%), Query Frame = 1 

Query: 1   MDN-FSEDRKRVHDELDDDSLAD-SAESKLRRLNSSDLRIGKP--------CTKEDFNVV 60
           MDN    +RKR   + DD        ESKL R++SS      P         T  + N  
Sbjct: 1   MDNSIDHNRKRARYDSDDPETKHIQPESKLVRVDSSHSVACSPESASTLFDSTNSEVNSD 60

Query: 61  QGSSAIAGDLNIDDLV-ESEE---IQDELLLNILEDSDVVAERDESAIEGLELDSFIKSF 120
           +  S     ++ D+LV E EE   IQD+LL NIL+DSD V +RD  AI+  +LDS IKSF
Sbjct: 61  ESLSPQPVRVDSDELVIEPEEVKLIQDDLL-NILDDSDAVTDRDP-AIQ--DLDSVIKSF 120

Query: 121 EEEIQGVPSSVDDQNNN-NETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFM 180
           EEEIQ     V +  ++   + Q ELGYL  ASDDELGLPP+ G S   E  K+EA DF 
Sbjct: 121 EEEIQVAAFPVSETTSSPGGSSQPELGYLLEASDDELGLPPTNGGS---EDGKLEAADF- 180

Query: 181 PPASSCSPDVFELEGKLGFDDD-IPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLF 240
              +S   +   L+G LGF++D IP YDSFELG+G   G     +N  GG E+VALGGLF
Sbjct: 181 ---TSSGSEAVGLDGMLGFENDIIPNYDSFELGIG---GDCNLNNNYNGGAEYVALGGLF 240

[Close]
BLAST of Csa1G042270 vs. NCBI nr
Match: gi|694319428|ref|XP_009347044.1| (PREDICTED: dentin sialophosphoprotein-like [Pyrus x bretschneideri])

HSP 1 Score: 140.6 bits (353), Expect = 3.6e-30
Identity = 107/258 (41.47%), Postives = 144/258 (55.81%), Query Frame = 1 

Query: 2   DNFSEDRKRVHDELDD-DSLADSAESKLRRLNSSDL--------RIGKPCTKEDFNVVQG 61
           D  + +RKR  D+ D+ ++ +   ++KL R++SS+           G      D N  + 
Sbjct: 3   DTSNHNRKRARDDSDNSEANSTQPDTKLIRVDSSNSVASSHESGSTGDQSNNSDINSGES 62

Query: 62  SSAIAGDLNIDDL----VESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEE 121
           S+     +N D L     E + IQD+LL NIL+DSD VAE  +       LDS IKSFEE
Sbjct: 63  STQTPDRVNSDALRMGSAEVKLIQDDLL-NILDDSDAVAEIQD-------LDSVIKSFEE 122

Query: 122 EIQ--GVPSSVDDQNNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMP 181
           EIQ    P+S +D + + E+ Q ELGYL  ASDDELGLPP+ G     E +K+EA DF  
Sbjct: 123 EIQVPAFPAS-EDTSASGESTQPELGYLLEASDDELGLPPTNG---ANEEEKIEAADF-- 182

Query: 182 PASSCSPDVFELEGKLGFDDD-IPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFD 239
             +    + F  +G +GFD+D IP YDSF+   GIG       DN +GG E++ALGGLFD
Sbjct: 183 --TESGFEAFGFDGIVGFDNDMIPSYDSFD--FGIGGDTEFINDNYIGGEEYLALGGLFD 242

[Close]
BLAST of Csa1G042270 vs. NCBI nr
Match: gi|764592777|ref|XP_011465401.1| (PREDICTED: uncharacterized protein LOC105351742 [Fragaria vesca subsp. vesca])

HSP 1 Score: 137.5 bits (345), Expect = 3.1e-29
Identity = 108/258 (41.86%), Postives = 143/258 (55.43%), Query Frame = 1 

Query: 1   MDNFSEDRKRVHDELD----DDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAI 60
           M N + + KR  DE D    +D +    E+KL R++S         + E    V    A 
Sbjct: 1   MANSNPNGKRSRDEDDSGRNNDVVEFRPEAKLIRVDSGSSIDSDASSGESAARVNPVDAE 60

Query: 61  AGDLNIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPS- 120
             D+   D  E+++IQ++LL NIL+DS+ V E  + AI+GLE  S IKSFEEEIQ VP+ 
Sbjct: 61  EFDM---DSAEAKKIQEDLL-NILDDSEAVTEERDPAIQGLE--SVIKSFEEEIQ-VPAP 120

Query: 121 --------SVDDQNNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPP 180
                   +      ++ + Q ELGYL  ASDDELGLPP+    + TE +KMEA DF   
Sbjct: 121 AAFAPPVETASGSGESSPSSQPELGYLLEASDDELGLPPTNN-GAVTEERKMEAADF--- 180

Query: 181 ASSCSPDVFELEGKLGFDDD-IPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDY 240
             + SP    L+G LGF++D IP YD+F+ GMG  S + V       GGE+V LGGLFDY
Sbjct: 181 --TASPPAAALDGMLGFENDIIPSYDAFDFGMGAYSESHV-------GGEYVPLGGLFDY 238

[Close]
BLAST of Csa1G042270 vs. NCBI nr
Match: gi|595849329|ref|XP_007209702.1| (hypothetical protein PRUPE_ppa012428mg [Prunus persica])

HSP 1 Score: 133.7 bits (335), Expect = 4.4e-28
Identity = 97/184 (52.72%), Postives = 118/184 (64.13%), Query Frame = 1 

Query: 66  VESEE---IQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQNN 125
           +ESEE   IQD+LL NIL+DSD V +RD  AI+  +LDS IKSFEEEIQ     V +  +
Sbjct: 1   MESEEVKLIQDDLL-NILDDSDTVTDRDP-AIQ--DLDSVIKSFEEEIQVPAFPVSETTS 60

Query: 126 N-NETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEGK 185
           +   + Q ELGYL  ASDDELGLPP+ G S   E  K+EA DF    +S   +   L+G 
Sbjct: 61  SPGGSSQPELGYLLEASDDELGLPPTNGGS---EDGKLEAADF----TSSGSEAVGLDGM 120

Query: 186 LGFDDD-IPCYDSFELGMGIGSGAAVAEDNGLGGGEFVALGGLFDY-----SDVLFRPES 240
           LGF++D IP YDSFELG+G   G     +N  GG E+VALGGLFDY     SDV +R ES
Sbjct: 121 LGFENDIIPNYDSFELGIG---GDCNLNNNYNGGAEYVALGGLFDYSDGGVSDVSWRNES 170

The following BLAST results are available for this feature:
BLAST of Csa1G042270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQD5_CUCSA4.3e-131100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042270 PE=4 SV=1[more]
M5WC72_PRUPE3.1e-2852.72Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012428mg PE=4 SV=1[more]
I1L4C8_SOYBN4.9e-2639.09Uncharacterized protein OS=Glycine max GN=GLYMA_09G185200 PE=4 SV=1[more]
K7L0J2_SOYBN1.4e-2537.45Uncharacterized protein OS=Glycine max GN=GLYMA_07G090800 PE=4 SV=1[more]
C6SZD6_SOYBN1.9e-2537.90Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
BLAST of Csa1G042270 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13360.11.7e-1730.65 unknown protein[more]
AT3G25870.11.7e-0934.43 unknown protein[more]
BLAST of Csa1G042270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664755|ref|XP_011660345.1|6.2e-131100.00PREDICTED: uncharacterized protein LOC105436376 [Cucumis sativus][more]
gi|645270053|ref|XP_008240279.1|1.2e-3045.38PREDICTED: uncharacterized protein LOC103338800 [Prunus mume][more]
gi|694319428|ref|XP_009347044.1|3.6e-3041.47PREDICTED: dentin sialophosphoprotein-like [Pyrus x bretschneideri][more]
gi|764592777|ref|XP_011465401.1|3.1e-2941.86PREDICTED: uncharacterized protein LOC105351742 [Fragaria vesca subsp. vesca][more]
gi|595849329|ref|XP_007209702.1|4.4e-2852.72hypothetical protein PRUPE_ppa012428mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G042270.1Csa1G042270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34539FAMILY NOT NAMEDcoord: 54..239
score: 3.9E-40coord: 1..30
score: 3.9
NoneNo IPR availablePANTHERPTHR34539:SF2SUBFAMILY NOT NAMEDcoord: 54..239
score: 3.9E-40coord: 1..30
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G042270Cla018508Watermelon (97103) v1cuwmB062
Csa1G042270Cla020389Watermelon (97103) v1cuwmB040
Csa1G042270Cla018980Watermelon (97103) v1cuwmB096
Csa1G042270MELO3C012239Melon (DHL92) v3.5.1cumeB011
Csa1G042270MELO3C002083Melon (DHL92) v3.5.1cumeB027
Csa1G042270ClCG06G014880Watermelon (Charleston Gray)cuwcgB083
Csa1G042270ClCG05G022790Watermelon (Charleston Gray)cuwcgB064
Csa1G042270ClCG04G011180Watermelon (Charleston Gray)cuwcgB057
Csa1G042270Lsi06G013370Bottle gourd (USVL1VR-Ls)culsiB072
Csa1G042270Lsi02G001760Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G042270MELO3C012239.2Melon (DHL92) v3.6.1cumedB006
Csa1G042270MELO3C002083.2Melon (DHL92) v3.6.1cumedB022
Csa1G042270Cla97C04G078040Watermelon (97103) v2cuwmbB054
Csa1G042270Cla97C05G104660Watermelon (97103) v2cuwmbB062
Csa1G042270Cla97C06G124390Watermelon (97103) v2cuwmbB080
Csa1G042270Bhi08G001016Wax gourdcuwgoB028
Csa1G042270Bhi07G001113Wax gourdcuwgoB072
Csa1G042270CSPI05G25190Wild cucumber (PI 183967)cpicuB216
Csa1G042270CSPI01G06710Wild cucumber (PI 183967)cpicuB000
Csa1G042270Cucsa.121410Cucumber (Gy14) v1cgycuB159
Csa1G042270Cucsa.283650Cucumber (Gy14) v1cgycuB406
Csa1G042270CmaCh18G010270Cucurbita maxima (Rimu)cmacuB406
Csa1G042270CmaCh10G002390Cucurbita maxima (Rimu)cmacuB069
Csa1G042270CmoCh10G002530Cucurbita moschata (Rifu)cmocuB059
Csa1G042270CmoCh18G010370Cucurbita moschata (Rifu)cmocuB395
Csa1G042270Cp4.1LG20g01210Cucurbita pepo (Zucchini)cpecuB505
Csa1G042270Cp4.1LG09g11410Cucurbita pepo (Zucchini)cpecuB029
Csa1G042270Cp4.1LG09g02930Cucurbita pepo (Zucchini)cpecuB028
Csa1G042270CsGy1G006440Cucumber (Gy14) v2cgybcuB001
Csa1G042270CsGy5G024660Cucumber (Gy14) v2cgybcuB199
Csa1G042270Carg22755Silver-seed gourdcarcuB0542
Csa1G042270Carg17918Silver-seed gourdcarcuB0492
Csa1G042270Carg04809Silver-seed gourdcarcuB0415
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa1G042270Csa5G608610Cucumber (Chinese Long) v2cucuB031
The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G042270Wax gourdcuwgoB014
Csa1G042270Cucumber (Chinese Long) v2cucuB000
Csa1G042270Cucurbita maxima (Rimu)cmacuB088
Csa1G042270Cucurbita maxima (Rimu)cmacuB217
Csa1G042270Cucurbita maxima (Rimu)cmacuB390
Csa1G042270Cucurbita moschata (Rifu)cmocuB077
Csa1G042270Cucurbita moschata (Rifu)cmocuB202
Csa1G042270Cucurbita moschata (Rifu)cmocuB380
Csa1G042270Melon (DHL92) v3.5.1cumeB056
Csa1G042270Cucurbita pepo (Zucchini)cpecuB357
Csa1G042270Cucurbita pepo (Zucchini)cpecuB655
Csa1G042270Cucumber (Gy14) v2cgybcuB004
Csa1G042270Melon (DHL92) v3.6.1cumedB048
Csa1G042270Silver-seed gourdcarcuB0623