Carg09146 (gene) Silver-seed gourd

Overview
NameCarg09146
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCarbohydrate-responsive element-binding protein
LocationCucurbita_argyrosperma_scaffold_063 : 772730 .. 773401 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCTTGCATTGATAGTAGGAAGCGAGTACGAGATGAATCGAATGAATCTCTGTTCAATTTTGTCGGCTCCAAGATCCTCCGATTTGATTCCGCTGAATTCAATTTCATCTCGCCGGATTTGGACGATGCACCAGTTGATTCCGTTTCATCAGATGCAGAATCGATCGTTTCAAAACAGAGTGGAGCTATTCATAGCAATGATTCAGGCCTGGACTCCTTTCAGCCACTTCCAATTCAGGAAGACCTACTGAAGATTCTCGAAGAAGCCGACGTTTCCATAGATCGGGAATTGGCGATTCCAGATCTCGACTCTGTGATCAGTAGCTTCGAGAAGGAAATAAACGTCCCGGTGCCTGCTGTTCAACCGGAACTTGGATACCTTCTAGAAGCGTCGGACGACGAATTAGGGCTTCCGCCAGCCGCCTTGAAAGGGGAAATGGAGCCTGTTAATTTTGGGGGCAAATATTCAGGTAGCGCCGGTATGAAAGGATTCTTAGGATTTGAGGATGAAGTTCCTAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGATTGAATGGAATCGGAGGGAAGAAGAGGTGGCGGCGTTGGGTGGATTGTTGGATCATAATACGGACGGAGCGGTGGAGTTGCCGCCGTATCGATCGGAGACCATGTTCTGTTTATAG

mRNA sequence

ATGGAACCTTGCATTGATAGTAGGAAGCGAGTACGAGATGAATCGAATGAATCTCTGTTCAATTTTGTCGGCTCCAAGATCCTCCGATTTGATTCCGCTGAATTCAATTTCATCTCGCCGGATTTGGACGATGCACCAGTTGATTCCGTTTCATCAGATGCAGAATCGATCGTTTCAAAACAGAGTGGAGCTATTCATAGCAATGATTCAGGCCTGGACTCCTTTCAGCCACTTCCAATTCAGGAAGACCTACTGAAGATTCTCGAAGAAGCCGACGTTTCCATAGATCGGGAATTGGCGATTCCAGATCTCGACTCTGTGATCAGTAGCTTCGAGAAGGAAATAAACGTCCCGGTGCCTGCTGTTCAACCGGAACTTGGATACCTTCTAGAAGCGTCGGACGACGAATTAGGGCTTCCGCCAGCCGCCTTGAAAGGGGAAATGGAGCCTGTTAATTTTGGGGGCAAATATTCAGGTAGCGCCGGTATGAAAGGATTCTTAGGATTTGAGGATGAAGTTCCTAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGATTGAATGGAATCGGAGGGAAGAAGAGGTGGCGGCGTTGGGTGGATTGTTGGATCATAATACGGACGGAGCGGTGGAGTTGCCGCCGTATCGATCGGAGACCATGTTCTGTTTATAG

Coding sequence (CDS)

ATGGAACCTTGCATTGATAGTAGGAAGCGAGTACGAGATGAATCGAATGAATCTCTGTTCAATTTTGTCGGCTCCAAGATCCTCCGATTTGATTCCGCTGAATTCAATTTCATCTCGCCGGATTTGGACGATGCACCAGTTGATTCCGTTTCATCAGATGCAGAATCGATCGTTTCAAAACAGAGTGGAGCTATTCATAGCAATGATTCAGGCCTGGACTCCTTTCAGCCACTTCCAATTCAGGAAGACCTACTGAAGATTCTCGAAGAAGCCGACGTTTCCATAGATCGGGAATTGGCGATTCCAGATCTCGACTCTGTGATCAGTAGCTTCGAGAAGGAAATAAACGTCCCGGTGCCTGCTGTTCAACCGGAACTTGGATACCTTCTAGAAGCGTCGGACGACGAATTAGGGCTTCCGCCAGCCGCCTTGAAAGGGGAAATGGAGCCTGTTAATTTTGGGGGCAAATATTCAGGTAGCGCCGGTATGAAAGGATTCTTAGGATTTGAGGATGAAGTTCCTAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGATTGAATGGAATCGGAGGGAAGAAGAGGTGGCGGCGTTGGGTGGATTGTTGGATCATAATACGGACGGAGCGGTGGAGTTGCCGCCGTATCGATCGGAGACCATGTTCTGTTTATAG

Protein sequence

MEPCIDSRKRVRDESNESLFNFVGSKILRFDSAEFNFISPDLDDAPVDSVSSDAESIVSKQSGAIHSNDSGLDSFQPLPIQEDLLKILEEADVSIDRELAIPDLDSVISSFEKEINVPVPAVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGSAGMKGFLGFEDEVPNYCWLENLSSEIEWNRREEEVAALGGLLDHNTDGAVELPPYRSETMFCL
Homology
[Close]
BLAST of Carg09146 vs. NCBI nr
Match: XP_023531746.1 (uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo] >XP_023531747.1 uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 9.8e-119
Identity = 216/223 (96.86%), Postives = 220/223 (98.65%), Query Frame = 0 

Query: 1   MEPCIDSRKRVRDESNESLFNFVGSKILRFDSAEFNFISPDLDDAPVDSVSSDAESIVSK 60
           MEPCIDSRKRVRDESNESLFNFVGSKILRFDSAEFNFISPD DDAPVDSVSSDAESIVSK
Sbjct: 1   MEPCIDSRKRVRDESNESLFNFVGSKILRFDSAEFNFISPDFDDAPVDSVSSDAESIVSK 60

Query: 61  QSGAIHSNDSGLDSFQPLPIQEDLLKILEEADVSIDRELAIPDLDSVISSFEKEINVPVP 120
           QSGAIHSNDSGLDSFQPLPI+EDLLKIL+EADVSIDRELAIPDLDSVISSFEKEINVPVP
Sbjct: 61  QSGAIHSNDSGLDSFQPLPIREDLLKILDEADVSIDRELAIPDLDSVISSFEKEINVPVP 120

Query: 121 AVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGSAGMKGFLGFEDEVPNYCWLE 180
           AVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSG AGMKGFLGFEDEVPNYCWLE
Sbjct: 121 AVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGIAGMKGFLGFEDEVPNYCWLE 180

Query: 181 NLSSEIEWNRREEEVAALGGLLDHNTDGAVELPPYRSETMFCL 224
           NLSSEIEWNR E+EVAALGGLLDHNTDGAVE+PPYRSETMFCL
Sbjct: 181 NLSSEIEWNRSEDEVAALGGLLDHNTDGAVEMPPYRSETMFCL 223

[Close]
BLAST of Carg09146 vs. NCBI nr
Match: XP_023516749.1 (uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.4 bits (664), Expect = 5.7e-66
Identity = 150/227 (66.08%), Postives = 166/227 (73.13%), Query Frame = 0 

Query: 1   MEPCIDSRKRVRDESNESLFNFVG--SKILRFDSAEFNFISPDLDDAPVDSVSSDAESIV 60
           ME C+DSRKR+RDESN+SLFNF+G  SK +R DSA       D+DDAP  SVSSDA+SI 
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANL-----DVDDAPNASVSSDAKSI- 60

Query: 61  SKQSGAIHSNDSGLDSFQPLPIQEDLLKILEEADVSIDRELAIPDLDSVISSFEKEINVP 120
                    + SGLDSFQ   IQ+DLLKIL++ D  IDRE  I DLDSVI SFEKEI VP
Sbjct: 61  ---------DSSGLDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVP 120

Query: 121 VPAVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGSAGMKGFLGFEDE-VPNYC 180
           VP+VQPELG+LLEASDDELGLPPA  K E E VNF  ++ GS GMKG LG EDE VPNYC
Sbjct: 121 VPSVQPELGFLLEASDDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDESVPNYC 180

Query: 181 WLENLSSEIEWNR-REEEVAALGGLLDHNTDGAVELPPYRSETMFCL 224
           WLENL SE EW+R  EEEV  LGGL DH TD A EL  YRSETM CL
Sbjct: 181 WLENLRSENEWSREEEEEVVVLGGLFDH-TDVATEL-AYRSETMPCL 210

[Close]
BLAST of Carg09146 vs. NCBI nr
Match: XP_022921385.1 (uncharacterized protein LOC111429674 [Cucurbita moschata])

HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63
Identity = 146/227 (64.32%), Postives = 161/227 (70.93%), Query Frame = 0 

Query: 1   MEPCIDSRKRVRDESNESLFNFVG--SKILRFDSAEFNFISPDLDDAPVDSVSSDAESIV 60
           ME C+DSRKR+RDESN+SLFNF+G  SK +R DSA       D+DDAP+ SVSSDA+SI 
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANL-----DVDDAPIASVSSDAKSI- 60

Query: 61  SKQSGAIHSNDSGLDSFQPLPIQEDLLKILEEADVSIDRELAIPDLDSVISSFEKEINVP 120
                         DSFQ   IQ+DLLKIL++ D  IDRE  I DLDSVI SFEKEI VP
Sbjct: 61  --------------DSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVP 120

Query: 121 VPAVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGSAGMKGFLGFEDE-VPNYC 180
           VP+ QPELG+LLEASDDELGLPPA  K E E VNF  ++ GS  MKG LG EDE VPNYC
Sbjct: 121 VPSGQPELGFLLEASDDELGLPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYC 180

Query: 181 WLENLSSEIEWNR-REEEVAALGGLLDHNTDGAVELPPYRSETMFCL 224
           WLENL SE EWNR  EEEV  LGGL DH TD A EL  YRSETM CL
Sbjct: 181 WLENLRSENEWNREEEEEVVVLGGLFDH-TDVATEL-AYRSETMPCL 205

[Close]
BLAST of Carg09146 vs. NCBI nr
Match: XP_008453684.1 (PREDICTED: uncharacterized protein LOC103494333 [Cucumis melo])

HSP 1 Score: 211.5 bits (537), Expect = 3.0e-51
Identity = 136/232 (58.62%), Postives = 151/232 (65.09%), Query Frame = 0 

Query: 1   MEPCIDSRKRVRDESN-ESLFNFVG--SKILRFDS-AEFNFISPDLDDAPVDSVSSDAES 60
           MEPC+D+RKR+RD+SN +SLFN +G  SK LR ++ A+ NF      DAPV         
Sbjct: 1   MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNF------DAPV--------- 60

Query: 61  IVSKQSGAIHSNDSGLDSFQP-LPIQEDLLKILEEADVSIDRELAIPDLDSVISSFEKEI 120
                           DSFQ    IQEDLLKIL++ D SIDRE AI DLDSVI SFEKEI
Sbjct: 61  ------------SQSTDSFQSHHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEI 120

Query: 121 NVPVPAVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGSAGMKGFLGFEDE-VP 180
            VPVP VQPELG+LLEASDDELGLPPA  K E+E   F    SGS G+KG LGFEDE V 
Sbjct: 121 EVPVPVVQPELGFLLEASDDELGLPPAGEKEEIEEAEF----SGSGGVKGVLGFEDEIVS 180

Query: 181 NYCWLENLSSEI-EW-NRREEEVAALGGLLDHNTDGAVELP-PYRSETMFCL 224
           NYCW +NL  EI EW    EEEV ALGGL DH TD A ELP  YRSE M CL
Sbjct: 181 NYCWFDNLRCEIKEWIPEEEEEVVALGGLFDH-TDVAAELPTAYRSERMPCL 200

[Close]
BLAST of Carg09146 vs. NCBI nr
Match: KGN63814.1 (hypothetical protein Csa_1G022530 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 6.3e-49
Identity = 134/234 (57.26%), Postives = 154/234 (65.81%), Query Frame = 0 

Query: 1   MEPCIDSRKRVRDESNESLFNFVG--SKILRFDS-AEFNFISPDLDDAPVDSVSSDAESI 60
           MEP +DSRKR+RD+SN+SLFN +G  SK LR ++ A  NF      DAP           
Sbjct: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNF------DAP----------- 60

Query: 61  VSKQSGAIHSNDSGLDSFQPLPIQEDLLKILEEADVSIDRELAIPDLDSVISSFEKEINV 120
           VS  + + HS+ +         IQEDLLKIL++ D SIDRE  I DLDSVI SFEKEI V
Sbjct: 61  VSHSTDSFHSHHT---------IQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEV 120

Query: 121 P----VPAVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGSAGMKGFLGFEDE- 180
           P    VP VQPELG+LLEASDDELGLPPAA  GE E +    ++SGS G+KG LGFEDE 
Sbjct: 121 PVTVTVPVVQPELGFLLEASDDELGLPPAA--GEKEEIE-EAEFSGSGGVKGGLGFEDEI 180

Query: 181 VPNYCWLENLSSEI-EWN-RREEEVAALGGLLDHNTDGAVELP-PYRSETMFCL 224
           V NYCW +NL  EI EW+   EEEV ALGGL DH TD A ELP  YRSE M CL
Sbjct: 181 VSNYCWFDNLRCEIKEWSTEEEEEVVALGGLFDH-TDVAAELPTAYRSERMPCL 204

[Close]
BLAST of Carg09146 vs. TAIR10
Match: AT1G13360.1 (unknown protein)

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-09
Identity = 49/140 (35.00%), Postives = 68/140 (48.57%), Query Frame = 0 

Query: 103 DLDSVISSFEKEINVPVPA----------VQPELGYLLEASDDELGLPP-------AALK 162
           DLDSV+ SFE E++                QP+LGYLLEASDDELGLPP          K
Sbjct: 56  DLDSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAK 115

Query: 163 GEMEP---VNFGGKYSGSAGMKGFLGFEDEVPNYCWLENLSSEIEWNRREEEVAALGGLL 221
            E+      +     S S+G+    GFED V NY  L+  S   +      +  A+ GL 
Sbjct: 116 EEVTTETVTDLVRASSDSSGIDEIWGFEDHVSNYGGLDFGSGVGDGG----DYVAVEGLF 175

[Close]
BLAST of Carg09146 vs. TAIR10
Match: AT3G25870.1 (unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = 0 

Query: 103 DLDSVISSFEKEINVPVPAV-----QPELGYLLEASDDELGLPP 142
           DLDSV+ SFE E++    A+     QP+LGYL EASDDELGLPP
Sbjct: 50  DLDSVMKSFENELSTTTAALSSGETQPDLGYLFEASDDELGLPP 93

[Close]
BLAST of Carg09146 vs. TrEMBL
Match: tr|A0A1S3BWV1|A0A1S3BWV1_CUCME (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51
Identity = 136/232 (58.62%), Postives = 151/232 (65.09%), Query Frame = 0 

Query: 1   MEPCIDSRKRVRDESN-ESLFNFVG--SKILRFDS-AEFNFISPDLDDAPVDSVSSDAES 60
           MEPC+D+RKR+RD+SN +SLFN +G  SK LR ++ A+ NF      DAPV         
Sbjct: 1   MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNF------DAPV--------- 60

Query: 61  IVSKQSGAIHSNDSGLDSFQP-LPIQEDLLKILEEADVSIDRELAIPDLDSVISSFEKEI 120
                           DSFQ    IQEDLLKIL++ D SIDRE AI DLDSVI SFEKEI
Sbjct: 61  ------------SQSTDSFQSHHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEI 120

Query: 121 NVPVPAVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGSAGMKGFLGFEDE-VP 180
            VPVP VQPELG+LLEASDDELGLPPA  K E+E   F    SGS G+KG LGFEDE V 
Sbjct: 121 EVPVPVVQPELGFLLEASDDELGLPPAGEKEEIEEAEF----SGSGGVKGVLGFEDEIVS 180

Query: 181 NYCWLENLSSEI-EW-NRREEEVAALGGLLDHNTDGAVELP-PYRSETMFCL 224
           NYCW +NL  EI EW    EEEV ALGGL DH TD A ELP  YRSE M CL
Sbjct: 181 NYCWFDNLRCEIKEWIPEEEEEVVALGGLFDH-TDVAAELPTAYRSERMPCL 200

[Close]
BLAST of Carg09146 vs. TrEMBL
Match: tr|A0A0A0LS21|A0A0A0LS21_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.2e-49
Identity = 134/234 (57.26%), Postives = 154/234 (65.81%), Query Frame = 0 

Query: 1   MEPCIDSRKRVRDESNESLFNFVG--SKILRFDS-AEFNFISPDLDDAPVDSVSSDAESI 60
           MEP +DSRKR+RD+SN+SLFN +G  SK LR ++ A  NF      DAP           
Sbjct: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNF------DAP----------- 60

Query: 61  VSKQSGAIHSNDSGLDSFQPLPIQEDLLKILEEADVSIDRELAIPDLDSVISSFEKEINV 120
           VS  + + HS+ +         IQEDLLKIL++ D SIDRE  I DLDSVI SFEKEI V
Sbjct: 61  VSHSTDSFHSHHT---------IQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEV 120

Query: 121 P----VPAVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGSAGMKGFLGFEDE- 180
           P    VP VQPELG+LLEASDDELGLPPAA  GE E +    ++SGS G+KG LGFEDE 
Sbjct: 121 PVTVTVPVVQPELGFLLEASDDELGLPPAA--GEKEEIE-EAEFSGSGGVKGGLGFEDEI 180

Query: 181 VPNYCWLENLSSEI-EWN-RREEEVAALGGLLDHNTDGAVELP-PYRSETMFCL 224
           V NYCW +NL  EI EW+   EEEV ALGGL DH TD A ELP  YRSE M CL
Sbjct: 181 VSNYCWFDNLRCEIKEWSTEEEEEVVALGGLFDH-TDVAAELPTAYRSERMPCL 204

[Close]
BLAST of Carg09146 vs. TrEMBL
Match: tr|A0A2N9EEW7|A0A2N9EEW7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1167 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.7e-24
Identity = 98/226 (43.36%), Postives = 123/226 (54.42%), Query Frame = 0 

Query: 1   MEPCIDS-RKRVRDESNESLFNFVGSKILRFDSAEFNFISPDLDDAPVDSVSSDAESIVS 60
           ME C D+ RKR +D+S     N    K +RFDS          DD         AES + 
Sbjct: 1   MEKCTDNKRKREQDDSG---INSPEPKRIRFDS----------DDL--------AESTLL 60

Query: 61  KQSGAIHSNDSGLDSFQPLPIQEDLLKILEEADVSIDRELAIPDLDSVISSFEKEINV-- 120
           +      SN+S L+S +   IQEDLL IL+++DV+ DR+ AI  LDSVI SFE+EI V  
Sbjct: 61  R----FDSNNSELNSPEVHRIQEDLLNILDDSDVT-DRDPAIQGLDSVIKSFEEEIQVQD 120

Query: 121 PVPAV----------QPELGYLLEASDDELGLPPAALKGE---MEPVNF--GGKYSGSAG 180
           P+PAV          QPELGYLLEASDDELGLPP +  GE   +E V F     Y    G
Sbjct: 121 PLPAVFDLTSDSGESQPELGYLLEASDDELGLPPTSSSGEETKIEAVEFEASSSYPNPVG 180

Query: 181 MKGFLGFEDEVPNYCWLE---NLSSEIEWNRREEEVAALGGLLDHN 206
           + G LGFE+E+P+Y          SE   N  + E  ALGGL D++
Sbjct: 181 LDGILGFENEMPSYDLFGFGIGFDSESNVNDIDGEFVALGGLFDYS 200

[Close]
BLAST of Carg09146 vs. TrEMBL
Match: tr|A0A2I4FJV8|A0A2I4FJV8_9ROSI (uncharacterized protein LOC108999481 OS=Juglans regia OX=51240 GN=LOC108999481 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.8e-21
Identity = 97/248 (39.11%), Postives = 129/248 (52.02%), Query Frame = 0 

Query: 1   MEPCI-DSRKRVRDESNESL----FNFVGSKILRFDSAEFNFISPDLDDAPVDSVSSDAE 60
           ME C  D RKRVRD+S ++      N    K LR D   F   + D  D+ +  V SD  
Sbjct: 1   MEECTDDKRKRVRDDSGDNSGRCGLNSSDPKRLRVD---FENSTDDSGDSTLVRVDSD-- 60

Query: 61  SIVSKQSGAIHSNDSGLDSFQPLPIQEDLLKILEEADVSIDR--ELAIPDLDSVISSFEK 120
                        DS L+S +   IQ+DLL IL+E D + +R  +  I  L+SVI SFE+
Sbjct: 61  -------------DSRLESPEVQRIQDDLLHILDE-DTATERDPDPEIQGLESVIRSFEE 120

Query: 121 EINVPVPAVQP--------------ELGYLLEASDDELGLPPAALKGE---MEPVNFGGK 180
           EI V  P + P              ELGYLLEASDDELGLPP     E   +E V+F   
Sbjct: 121 EILVAAPELAPAVLDQTYDSGESQLELGYLLEASDDELGLPPTISPEEETKIEAVDFDTS 180

Query: 181 YSGSAGMKGFLGFEDEVPNYCWLENLSSEIEWNRREE---EVAALGGLLDHNTDGAVELP 222
            SG+AG+ GFLGFE+E+PNY   E       ++  ++   E+ ALGGL D+ +D + E P
Sbjct: 181 SSGAAGLTGFLGFENEIPNYDSFEFGVGFDPYSNTDDTSGELVALGGLFDY-SDRSFE-P 227

[Close]
BLAST of Carg09146 vs. TrEMBL
Match: tr|A0A2P4KPA4|A0A2P4KPA4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_78493 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.4e-20
Identity = 76/197 (38.58%), Postives = 106/197 (53.81%), Query Frame = 0 

Query: 29  RFDSAEFNFISPDLDDAPVDSVSSDAESIVSKQSGAIHSNDSGLDSFQPLPIQEDLLKIL 88
           + D  + +  SP+     +DS +S   ++V+ ++       + L        +EDLL IL
Sbjct: 6   KLDENDSDLNSPEPKRIRIDSDNSAESTLVNSENXXXXXXXTHLS-------EEDLLNIL 65

Query: 89  EEADVSIDRELAIPDLDSVISSFEKEINVPVPAV-----------QPELGYLLEASDDEL 148
           +++D+  DR+ AI  LDSVI SFE+EI VP PA            QPELGYLLEASDDEL
Sbjct: 66  DDSDIVTDRDPAIQGLDSVIKSFEEEILVPAPAAVVDQTSDSGESQPELGYLLEASDDEL 125

Query: 149 GLPPAALKGE---MEPVNFGGKYSG--SAGMKG-FLGFEDEVPNYCWLE---NLSSEIEW 206
           GLPP    GE   +E V+F    +G  + G+ G  LGFE+E+P+Y   E    +  E   
Sbjct: 126 GLPPTTSSGEEVKIEAVDFEASSAGPEAVGLDGILLGFENEIPSYDSFEFGIGVGLESNL 185

The following BLAST results are available for this feature:
BLAST of Carg09146 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023531746.19.8e-11996.86uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo] >XP_023531747.... [more]
XP_023516749.15.7e-6666.08uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo][more]
XP_022921385.12.0e-6364.32uncharacterized protein LOC111429674 [Cucurbita moschata][more]
XP_008453684.13.0e-5158.62PREDICTED: uncharacterized protein LOC103494333 [Cucumis melo][more]
KGN63814.16.3e-4957.26hypothetical protein Csa_1G022530 [Cucumis sativus][more]
BLAST of Carg09146 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13360.12.7e-0935.00unknown protein[more]
AT3G25870.11.9e-0761.36unknown protein[more]
BLAST of Carg09146 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg09146 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BWV1|A0A1S3BWV1_CUCME2.0e-5158.62uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=... [more]
tr|A0A0A0LS21|A0A0A0LS21_CUCSA4.2e-4957.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1[more]
tr|A0A2N9EEW7|A0A2N9EEW7_FAGSY2.7e-2443.36Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1167 PE=4 SV=1[more]
tr|A0A2I4FJV8|A0A2I4FJV8_9ROSI2.8e-2139.11uncharacterized protein LOC108999481 OS=Juglans regia OX=51240 GN=LOC108999481 P... [more]
tr|A0A2P4KPA4|A0A2P4KPA4_QUESU2.4e-2038.58Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_78493 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09146-RACarg09146-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34539FAMILY NOT NAMEDcoord: 6..208
NoneNo IPR availablePANTHERPTHR34539:SF2SUBFAMILY NOT NAMEDcoord: 6..208

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09146Cla018508Watermelon (97103) v1carwmB0592
Carg09146Cla018980Watermelon (97103) v1carwmB0594
Carg09146Csa1G022530Cucumber (Chinese Long) v2carcuB0622
Carg09146MELO3C017301Melon (DHL92) v3.5.1carmeB0599
Carg09146MELO3C002083Melon (DHL92) v3.5.1carmeB0598
Carg09146MELO3C012239Melon (DHL92) v3.5.1carmeB0597
Carg09146ClCG06G014880Watermelon (Charleston Gray)carwcgB0581
Carg09146ClCG04G011180Watermelon (Charleston Gray)carwcgB0579
Carg09146CSPI01G03740Wild cucumber (PI 183967)carcpiB0628
Carg09146Cucsa.199020Cucumber (Gy14) v1carcgyB0673
Carg09146CmaCh10G002390Cucurbita maxima (Rimu)carcmaB0827
Carg09146CmoCh11G002720Cucurbita moschata (Rifu)carcmoB0808
Carg09146CmoCh10G002530Cucurbita moschata (Rifu)carcmoB0805
Carg09146Lsi02G001760Bottle gourd (USVL1VR-Ls)carlsiB538
Carg09146Lsi06G013370Bottle gourd (USVL1VR-Ls)carlsiB540
Carg09146Cp4.1LG04g14030Cucurbita pepo (Zucchini)carcpeB0847
Carg09146Cp4.1LG09g11410Cucurbita pepo (Zucchini)carcpeB0840
Carg09146Cp4.1LG18g07580Cucurbita pepo (Zucchini)carcpeB0845
Carg09146CsGy1G003670Cucumber (Gy14) v2carcgybB0594
Carg09146MELO3C017301.2Melon (DHL92) v3.6.1carmedB0606
Carg09146MELO3C002083.2Melon (DHL92) v3.6.1carmedB0605
Carg09146MELO3C012239.2Melon (DHL92) v3.6.1carmedB0604
Carg09146CsaV3_1G003770Cucumber (Chinese Long) v3carcucB0629
Carg09146Cla97C04G078040Watermelon (97103) v2carwmbB0621
Carg09146Cla97C05G104660Watermelon (97103) v2carwmbB0622
Carg09146Cla97C06G124390Watermelon (97103) v2carwmbB0623
Carg09146Bhi01G002708Wax gourdcarwgoB0703
Carg09146Bhi08G001016Wax gourdcarwgoB0705
Carg09146Bhi07G001113Wax gourdcarwgoB0706
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg09146Carg04809Silver-seed gourdcarcarB416
Carg09146Carg17918Silver-seed gourdcarcarB459
Carg09146Carg22755Silver-seed gourdcarcarB496
Carg09146Carg01834Silver-seed gourdcarcarB538
The following block(s) are covering this gene:
GeneOrganismBlock
Carg09146Cucumber (Gy14) v2carcgybB0595
Carg09146Cucumber (Gy14) v2carcgybB0598
Carg09146Cucumber (Gy14) v1carcgyB0676
Carg09146Cucurbita maxima (Rimu)carcmaB0830
Carg09146Cucurbita maxima (Rimu)carcmaB0832
Carg09146Cucurbita maxima (Rimu)carcmaB0833
Carg09146Cucurbita maxima (Rimu)carcmaB0834
Carg09146Cucurbita maxima (Rimu)carcmaB0836
Carg09146Cucurbita moschata (Rifu)carcmoB0810
Carg09146Cucurbita moschata (Rifu)carcmoB0811
Carg09146Cucurbita moschata (Rifu)carcmoB0812
Carg09146Cucurbita moschata (Rifu)carcmoB0814
Carg09146Cucurbita pepo (Zucchini)carcpeB0846
Carg09146Wild cucumber (PI 183967)carcpiB0629
Carg09146Wild cucumber (PI 183967)carcpiB0632
Carg09146Cucumber (Chinese Long) v2carcuB0623
Carg09146Cucumber (Chinese Long) v2carcuB0626
Carg09146Cucumber (Chinese Long) v3carcucB0630
Carg09146Cucumber (Chinese Long) v3carcucB0633
Carg09146Bottle gourd (USVL1VR-Ls)carlsiB539
Carg09146Watermelon (Charleston Gray)carwcgB0580
Carg09146Watermelon (97103) v1carwmB0591