Carg01834 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAATCAGAACTCGAAGAAGCGGGATTGGGACGACTTGGCCGACTCGGAGGTCGGTTCGCCGGAGGTGAAGCGGCTTAGAGATGACCTTCTAGGTTTTCTCGACGAGTCCAATCTAGAACCGGCGACTCCCGATCTCGACTCGTTGATGAGGAGTTTCGAGGAAGAAATTGCTACCGCGTCGTCTTCTCCGGTGCCGGTGGTGGATTTAACGGCGGATTCCGGTGAGTCTCAGCCGGAGTTAGGCTACCTCTTGGAAGCCTCCGACGACGAGCTTGGTCTACCGCCTTCAGTTACTTCGAATAGCCAACAGGAGTTTGACGAAGCGACCGAGTTTGCTCGAGTAACGACCGATTCGTCTGAGACCAGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGACGCTTTCGAACTGGAAGCCGGAGATATGTTTAGCGGCAACCACGCGGCCGAGTATGTGGGTTTGGATGGGCTGTTGGAGTATTCGAATCTGTGTTCTGATGCGTTGGATAACTCGGATTTTCTCTGGCGGCAAGAATCTCTACCGGCTCAATAG ATGGAGAATCAGAACTCGAAGAAGCGGGATTGGGACGACTTGGCCGACTCGGAGGTCGGTTCGCCGGAGGTGAAGCGGCTTAGAGATGACCTTCTAGGTTTTCTCGACGAGTCCAATCTAGAACCGGCGACTCCCGATCTCGACTCGTTGATGAGGAGTTTCGAGGAAGAAATTGCTACCGCGTCGTCTTCTCCGGTGCCGGTGGTGGATTTAACGGCGGATTCCGGTGAGTCTCAGCCGGAGTTAGGCTACCTCTTGGAAGCCTCCGACGACGAGCTTGGTCTACCGCCTTCAGTTACTTCGAATAGCCAACAGGAGTTTGACGAAGCGACCGAGTTTGCTCGAGTAACGACCGATTCGTCTGAGACCAGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGACGCTTTCGAACTGGAAGCCGGAGATATGTTTAGCGGCAACCACGCGGCCGAGTATGTGGGTTTGGATGGGCTGTTGGAGTATTCGAATCTGTGTTCTGATGCGTTGGATAACTCGGATTTTCTCTGGCGGCAAGAATCTCTACCGGCTCAATAG ATGGAGAATCAGAACTCGAAGAAGCGGGATTGGGACGACTTGGCCGACTCGGAGGTCGGTTCGCCGGAGGTGAAGCGGCTTAGAGATGACCTTCTAGGTTTTCTCGACGAGTCCAATCTAGAACCGGCGACTCCCGATCTCGACTCGTTGATGAGGAGTTTCGAGGAAGAAATTGCTACCGCGTCGTCTTCTCCGGTGCCGGTGGTGGATTTAACGGCGGATTCCGGTGAGTCTCAGCCGGAGTTAGGCTACCTCTTGGAAGCCTCCGACGACGAGCTTGGTCTACCGCCTTCAGTTACTTCGAATAGCCAACAGGAGTTTGACGAAGCGACCGAGTTTGCTCGAGTAACGACCGATTCGTCTGAGACCAGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGACGCTTTCGAACTGGAAGCCGGAGATATGTTTAGCGGCAACCACGCGGCCGAGTATGTGGGTTTGGATGGGCTGTTGGAGTATTCGAATCTGTGTTCTGATGCGTTGGATAACTCGGATTTTCTCTGGCGGCAAGAATCTCTACCGGCTCAATAG MENQNSKKRDWDDLADSEVGSPEVKRLRDDLLGFLDESNLEPATPDLDSLMRSFEEEIATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSVTSNSQQEFDEATEFARVTTDSSETSEMWRFEDQIPNYDAFELEAGDMFSGNHAAEYVGLDGLLEYSNLCSDALDNSDFLWRQESLPAQ
BLAST of Carg01834 vs. NCBI nr
Match: XP_022957064.1 (uncharacterized protein LOC111458553 [Cucurbita moschata] >XP_022957065.1 uncharacterized protein LOC111458553 [Cucurbita moschata] >XP_022957066.1 uncharacterized protein LOC111458553 [Cucurbita moschata] >XP_022957067.1 uncharacterized protein LOC111458553 [Cucurbita moschata]) HSP 1 Score: 365.2 bits (936), Expect = 1.4e-97 Identity = 185/187 (98.93%), Postives = 186/187 (99.47%), Query Frame = 0
BLAST of Carg01834 vs. NCBI nr
Match: XP_023550692.1 (uncharacterized protein LOC111808759 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 353.6 bits (906), Expect = 4.1e-94 Identity = 183/191 (95.81%), Postives = 185/191 (96.86%), Query Frame = 0
BLAST of Carg01834 vs. NCBI nr
Match: XP_022986643.1 (uncharacterized protein LOC111484295 [Cucurbita maxima]) HSP 1 Score: 347.4 bits (890), Expect = 3.0e-92 Identity = 179/189 (94.71%), Postives = 183/189 (96.83%), Query Frame = 0
BLAST of Carg01834 vs. NCBI nr
Match: XP_008446589.1 (PREDICTED: uncharacterized protein LOC103489276 [Cucumis melo]) HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75 Identity = 153/187 (81.82%), Postives = 163/187 (87.17%), Query Frame = 0
BLAST of Carg01834 vs. NCBI nr
Match: XP_023542043.1 (uncharacterized protein LOC111802016 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 291.2 bits (744), Expect = 2.5e-75 Identity = 153/190 (80.53%), Postives = 164/190 (86.32%), Query Frame = 0
BLAST of Carg01834 vs. TAIR10
Match: AT3G25870.1 (unknown protein) HSP 1 Score: 110.9 bits (276), Expect = 8.4e-25 Identity = 79/188 (42.02%), Postives = 104/188 (55.32%), Query Frame = 0
BLAST of Carg01834 vs. TAIR10
Match: AT1G13360.1 (unknown protein) HSP 1 Score: 109.8 bits (273), Expect = 1.9e-24 Identity = 63/153 (41.18%), Postives = 95/153 (62.09%), Query Frame = 0
BLAST of Carg01834 vs. TrEMBL
Match: tr|A0A1S3BEX2|A0A1S3BEX2_CUCME (uncharacterized protein LOC103489276 OS=Cucumis melo OX=3656 GN=LOC103489276 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.3e-75 Identity = 153/187 (81.82%), Postives = 163/187 (87.17%), Query Frame = 0
BLAST of Carg01834 vs. TrEMBL
Match: tr|A0A0A0KR57|A0A0A0KR57_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608610 PE=4 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 3.5e-73 Identity = 149/187 (79.68%), Postives = 160/187 (85.56%), Query Frame = 0
BLAST of Carg01834 vs. TrEMBL
Match: tr|A0A2N9GDB9|A0A2N9GDB9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25494 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.3e-48 Identity = 116/189 (61.38%), Postives = 143/189 (75.66%), Query Frame = 0
BLAST of Carg01834 vs. TrEMBL
Match: tr|A0A2I4HUI3|A0A2I4HUI3_9ROSI (uncharacterized protein LOC109021588 OS=Juglans regia OX=51240 GN=LOC109021588 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.3e-47 Identity = 112/188 (59.57%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Carg01834 vs. TrEMBL
Match: tr|A0A2P4LG97|A0A2P4LG97_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_16361 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.4e-45 Identity = 111/188 (59.04%), Postives = 140/188 (74.47%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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