Carg22269 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTGGTCTCGCGTAGGGTTTGTCCTCGTTAGGGAAAGGTTGATTCTGAAAAAGGTTGTTCGCGGTTTTTAAGGATCTGTTCTTTGGTAGTTTTTTTTTTCGTATAAAAAGAGATCTATTCTTGTTTTCTTGGTCTGGATCTCAGATCTGTTGCTGGTTGGGAAATTTTTTGAAGTTTTTTGTCCAAAAAATTAGCTGAAAGGTTATGATTTTGTGTTTTTGTTCATGGAAATTGGATTCTTAGCTCAGATCTGTTGATTCTAAACTTAAAGAGATTTGGATCTGTTGCTTGGCTATAGTTTTAGCATTGATAGAATGGATTTTTTTACTAGTTCTCGATCAGATCTGACTAATTATGAGATTTTGAGCTTTGATTGAATGAATATTTGGCTAGTTTTCCATTAGATCTGACTGTGTTAGAGTTGCTGTGTATCCATTGTCTCAACGCCGTTTGAATCGGGATATTTGCAGGCGTTCTTCTGTGGATCTGCCAGTTTCAAAGATGAATCATTATATTGTTAAGCAGAATACGTTTATTTCACGTGAGGAGACTAAGGGCTTTGCCTCAATCTCTGATCTGAAGGACCCAATTGTCTGCCCAAAGCCCAGGCGACTCGCAATTCTTGCTAACAATCACATTAAACAGCCCTTAAGATGGCACCAAACTGAGTTTTGTGATTCAAAAGCTGGGGCAGATCTCCTAGATATCATCTTAAAGAAGGCAAGTTCTAATTATAAGTTCAATATTTGA ATGTTGTGGTCTCGCGTAGGATCTGACTGTGTTAGAGTTGCTGTGTATCCATTGTCTCAACGCCGTTTGAATCGGGATATTTGCAGGCGTTCTTCTGTGGATCTGCCAGTTTCAAAGATGAATCATTATATTGTTAAGCAGAATACGTTTATTTCACGTGAGGAGACTAAGGGCTTTGCCTCAATCTCTGATCTGAAGGACCCAATTGTCTGCCCAAAGCCCAGGCGACTCGCAATTCTTGCTAACAATCACATTAAACAGCCCTTAAGATGGCACCAAACTGAGTTTTGTGATTCAAAAGCTGGGGCAGATCTCCTAGATATCATCTTAAAGAAGGCAAGTTCTAATTATAAGTTCAATATTTGA ATGTTGTGGTCTCGCGTAGGATCTGACTGTGTTAGAGTTGCTGTGTATCCATTGTCTCAACGCCGTTTGAATCGGGATATTTGCAGGCGTTCTTCTGTGGATCTGCCAGTTTCAAAGATGAATCATTATATTGTTAAGCAGAATACGTTTATTTCACGTGAGGAGACTAAGGGCTTTGCCTCAATCTCTGATCTGAAGGACCCAATTGTCTGCCCAAAGCCCAGGCGACTCGCAATTCTTGCTAACAATCACATTAAACAGCCCTTAAGATGGCACCAAACTGAGTTTTGTGATTCAAAAGCTGGGGCAGATCTCCTAGATATCATCTTAAAGAAGGCAAGTTCTAATTATAAGTTCAATATTTGA MLWSRVGSDCVRVAVYPLSQRRLNRDICRRSSVDLPVSKMNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDSKAGADLLDIILKKASSNYKFNI
BLAST of Carg22269 vs. NCBI nr
Match: XP_022935211.1 (uncharacterized protein LOC111442160 [Cucurbita moschata]) HSP 1 Score: 157.1 bits (396), Expect = 3.7e-35 Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Carg22269 vs. NCBI nr
Match: XP_023528274.1 (uncharacterized protein LOC111791243 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 157.1 bits (396), Expect = 3.7e-35 Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Carg22269 vs. NCBI nr
Match: XP_022983663.1 (uncharacterized protein LOC111482209 [Cucurbita maxima]) HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34 Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Carg22269 vs. NCBI nr
Match: XP_008461589.1 (PREDICTED: uncharacterized protein LOC103500158 [Cucumis melo]) HSP 1 Score: 146.7 bits (369), Expect = 4.9e-32 Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0
BLAST of Carg22269 vs. NCBI nr
Match: XP_022148186.1 (uncharacterized protein LOC111016920 [Momordica charantia]) HSP 1 Score: 146.4 bits (368), Expect = 6.5e-32 Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 0
BLAST of Carg22269 vs. TAIR10
Match: AT5G16110.1 (unknown protein) HSP 1 Score: 84.0 bits (206), Expect = 7.1e-17 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of Carg22269 vs. TAIR10
Match: AT3G02555.1 (unknown protein) HSP 1 Score: 70.9 bits (172), Expect = 6.3e-13 Identity = 42/81 (51.85%), Postives = 51/81 (62.96%), Query Frame = 0
BLAST of Carg22269 vs. TAIR10
Match: AT1G13390.1 (unknown protein) HSP 1 Score: 68.9 bits (167), Expect = 2.4e-12 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of Carg22269 vs. TAIR10
Match: AT1G68490.1 (unknown protein) HSP 1 Score: 57.0 bits (136), Expect = 9.4e-09 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 0
BLAST of Carg22269 vs. TrEMBL
Match: tr|A0A1S3CF27|A0A1S3CF27_CUCME (uncharacterized protein LOC103500158 OS=Cucumis melo OX=3656 GN=LOC103500158 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 3.3e-32 Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0
BLAST of Carg22269 vs. TrEMBL
Match: tr|A0A0A0L9U7|A0A0A0L9U7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G280930 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 5.6e-32 Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 0
BLAST of Carg22269 vs. TrEMBL
Match: tr|Q1KUR8|Q1KUR8_9ROSI (Uncharacterized protein OS=Tarenaya spinosa OX=228870 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 9.2e-19 Identity = 53/87 (60.92%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of Carg22269 vs. TrEMBL
Match: tr|Q1KUV3|Q1KUV3_9ROSI (Uncharacterized protein OS=Tarenaya spinosa OX=228870 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.6e-18 Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of Carg22269 vs. TrEMBL
Match: tr|A0A2P4LM87|A0A2P4LM87_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_55469 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.3e-17 Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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