Carg22092 (gene) Silver-seed gourd

Overview
NameCarg22092
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionADP-ribosylation factor-related protein 1
LocationCucurbita_argyrosperma_scaffold_229 : 76572 .. 79290 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGCTTTGCAATTGCGGCAATCGGGAGAAATTGGGAGTCTGAGACAGAATTTTGGTCTACTTTCAGACGGTGGGAGCTCGTCTTTGCTGCACTGAAAGGTAAAGCCCTGCACTACCGCCACTTCTTTCACTAATCCCTTCTTTAATACACTTTGAATCCGACTTTATATCTGTTTTATCGATCCGAATTTGTAATGGGTTTCAATTAAATTTGCATCAGATTGCCTGATCTGATTCATTTACGGCTTCGATCGCCAAAAATCAACTGGGTATTTTTCCATTTCCATTTTTGTTTATGATGGAATTCTCTTGTGTTTCATTGCAATTGTTTCGGGTCGCTCGATGTTTGATCTTTCCTATTGCAATGTTTTGAGTAACACGGATTCTCGTATGAAGTTGATTTCGATTCTTATTGTGTGTCTTTTGCTCCTCATTTCCACCCTCGATGGTGCATATGGTTTGCCATTTGGAATATGGTGGACGATAATTTTGCTTTGAATCGCCTCTGAAAAGATTTCTCGGCTTGTAGAAACGATTTTATGAAACGGTGTATAGAACCCCTTTTTTATACGAAGCTATGAATGAGCAAGGGAGTGTGTTATTGTATTTTCTTTCGTTTTCTTCCCCCATGACAACATTTCTATGGAGGTTGCTTTTGAAATCCTGTGATGTTTTAACACCAAGCTTGGATTGTTCTTCTTATGTCTGAACTTTCATTGACTTTGCAAAAGCTTTGCAGATTTTCTTGAGTTTCTAAATTTGAGCTATAATTTGAATTCTCATGGAACCGGACTTAATGGATAGGAGAAGAGACAGTAAGTTTAAAAATAAATTACCCTTCATTTGGATTTTAATTATGGAGAAGGTTGATGATTTAAGAGAGTTCATATTTGCGTTGAAGTGAAATCTTTCATGAGTTTGTTGAATCTTAAGTTTATCATATTATTTGAACCTCTAACTTCTTGGTAGAGGGTACTTTTTGTTGAAATGTAATTGAAGTTCTTAGAAGTTAATGAACCATAATTAGGAGGTTAAAATGAAATCAATTCTGGTTAAGAGAGATTCATGCTGAATGGTATATAATTTGTCACATCTATTATGTTTAATGAATTCTCTGAGCTGCCTCCCTGTTTCTCTCTAGAACAATATGTTTAGGGGAGCGAGGGGCGATTACCGATGCAAAACTATTTTAAAGTGGAATGATCTTTAGTTTGATTTACTGTTCTATCCAAGGAAGTCATCTCTATTCTGTTTGTGGAGTTGCAGAATAAGTTGGCCAAAGGAGAGTTTGAAGTTATGAAGTTTGATCCCAAGGGTTAAGAGCAACTAATACCCCAAGTAAACTGAAAAGACACGATGTTCTCTTTATTTTATGGCCTCTGGAAGTACATATTTAGTAAGACAGAATTTCATGTTCTCATCCTAGGAATCGACAAGGCGGGGAAAACGGTAAACCTCTTCCCTCTTGACTGATTGTACATAGTTATTTCTTCAAAGTTTACGCTATGTTTTCAGCTCCTTTCTAGGCTTGCTAACTTCTTTCCATTCACTTTTAACTTTGTCGTGTAGACTTTGCTTGAGAAGTTGAAGTCATTATACTCGAACTTGGAAGGTCTATCCCCTGATCGGATTGTTCCAACCGTTGGACTCAATATTGGGCGTCTAGAGGTGTTGAATGCAAAACTTGTCTTCTGGGATCTGGGAGGTCAGGTATGGATATGTAACGAACAATGGTGTTGTAATATAGATTTTTTAAGTACAATGCATACATGTGTCGCTTTTGGCTGAACCCTTCGTGCCAAGCATGCTGTAAACCCACATATTATAGCTGATATTTAAGTTGCTAGATTGTAACAGCCCAAGCCCACCGCTAATAGATATTGGCTACTATCGCCGTCAGCCTCAGAATTTTAAAACATGTCTATTAGGGAGAGGTTTCCACACCCTTATAAGAAATGCTTCATTCTCCTCTCTAACCGATGTAGGATCTCACGATCCACTCCCCTTGGGGGCCAGCGTCCTCACTGGCACACCGCCTAGTGTCTAACTCTGATAGATACCATTTGTAACAGCCTAAGCCCACTACTAGTAGATATTGTCTGCTTTGGCCCGTTACGTATTGCCGTCAGTCTCACAGTTTTAAAATGTGTCTGTTAGGGAGAAGTTTCCACACCCTTATAAGAAATGCTTCGTTTTCCTCCCCAACCGACGTGGGATCTCACACAAAATCTGTTGTTGCTAGCTTTCTTTATACTAAATACATTATCTAAAGTCTTAAAGAGTTTTGTAGAATCTTGTTCCTCTCTCTTACATTTTTGTTTTGTGGGTGGGAATTTGAATGTGTTATTTATCTCAGTTTTTTCCCCCTTTTTGAATTATTGCAGCCTGGCCTTCGGTCTATTTGGGAGAAATATTATGAAGAGGCACATGCTGTGATCTATGTAATCGATGCTGCTTGTCCATCAAAATTTGAAGATTCCAAATCTGCACTGGGTAGGTGATGCCATAGTGTGGCCATACCTTAATTATGTTGGTATCAGCAGTGATAGAACTTGAATATGATGCATTGATATTATTTTGAATTTCTTTCCCAGAGAAAGTTCTTCGACACGAGGATCTGCAAGGAGCTCCACTTTTGGTTTTAGCAAACAAGCAGGTGAGAACCAGTGATGATTCAATCATAAATTGGAAAACAAATGAGATCAAGTTGTATTGTTGA

mRNA sequence

ATTGCTTTGCAATTGCGGCAATCGGGAGAAATTGGGAGTCTGAGACAGAATTTTGGTCTACTTTCAGACGGTGGGAGCTCGTCTTTGCTGCACTGAAAGAATAAGTTGGCCAAAGGAGAGTTTGAAGTTATGAAGTTTGATCCCAAGGGTTAAGAGCAACTAATACCCCAAGTAAACTGAAAAGACACGATGTTCTCTTTATTTTATGGCCTCTGGAAGTACATATTTAGTAAGACAGAATTTCATGTTCTCATCCTAGGAATCGACAAGGCGGGGAAAACGACTTTGCTTGAGAAGTTGAAGTCATTATACTCGAACTTGGAAGGTCTATCCCCTGATCGGATTGTTCCAACCGTTGGACTCAATATTGGGCGTCTAGAGGTGTTGAATGCAAAACTTGTCTTCTGGGATCTGGGAGGTCAGCCTGGCCTTCGGTCTATTTGGGAGAAATATTATGAAGAGGCACATGCTGTGATCTATGTAATCGATGCTGCTTGTCCATCAAAATTTGAAGATTCCAAATCTGCACTGGAGAAAGTTCTTCGACACGAGGATCTGCAAGGAGCTCCACTTTTGGTTTTAGCAAACAAGCAGGTGAGAACCAGTGATGATTCAATCATAAATTGGAAAACAAATGAGATCAAGTTGTATTGTTGA

Coding sequence (CDS)

ATGTTCTCTTTATTTTATGGCCTCTGGAAGTACATATTTAGTAAGACAGAATTTCATGTTCTCATCCTAGGAATCGACAAGGCGGGGAAAACGACTTTGCTTGAGAAGTTGAAGTCATTATACTCGAACTTGGAAGGTCTATCCCCTGATCGGATTGTTCCAACCGTTGGACTCAATATTGGGCGTCTAGAGGTGTTGAATGCAAAACTTGTCTTCTGGGATCTGGGAGGTCAGCCTGGCCTTCGGTCTATTTGGGAGAAATATTATGAAGAGGCACATGCTGTGATCTATGTAATCGATGCTGCTTGTCCATCAAAATTTGAAGATTCCAAATCTGCACTGGAGAAAGTTCTTCGACACGAGGATCTGCAAGGAGCTCCACTTTTGGTTTTAGCAAACAAGCAGGTGAGAACCAGTGATGATTCAATCATAAATTGGAAAACAAATGAGATCAAGTTGTATTGTTGA

Protein sequence

MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNIGRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRHEDLQGAPLLVLANKQVRTSDDSIINWKTNEIKLYC
Homology
[Close]
BLAST of Carg22092 vs. NCBI nr
Match: XP_022944816.1 (ADP-ribosylation factor-related protein 1 [Cucurbita moschata] >XP_022944817.1 ADP-ribosylation factor-related protein 1 [Cucurbita moschata] >XP_022944818.1 ADP-ribosylation factor-related protein 1 [Cucurbita moschata] >XP_023541415.1 ADP-ribosylation factor-related protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.2 bits (700), Expect = 2.6e-70
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI
Sbjct: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH
Sbjct: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120

Query: 121 EDLQGAPLLVLANKQ 136
           EDLQGAPLLVLANKQ
Sbjct: 121 EDLQGAPLLVLANKQ 135

[Close]
BLAST of Carg22092 vs. NCBI nr
Match: XP_022968222.1 (ADP-ribosylation factor-related protein 1 [Cucurbita maxima] >XP_022968223.1 ADP-ribosylation factor-related protein 1 [Cucurbita maxima] >XP_022968224.1 ADP-ribosylation factor-related protein 1 [Cucurbita maxima])

HSP 1 Score: 274.2 bits (700), Expect = 2.6e-70
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI
Sbjct: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH
Sbjct: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120

Query: 121 EDLQGAPLLVLANKQ 136
           EDLQGAPLLVLANKQ
Sbjct: 121 EDLQGAPLLVLANKQ 135

[Close]
BLAST of Carg22092 vs. NCBI nr
Match: XP_004140778.1 (PREDICTED: ADP-ribosylation factor-related protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 4.5e-70
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSLFYGLWKY+FSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI
Sbjct: 1   MFSLFYGLWKYLFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH
Sbjct: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120

Query: 121 EDLQGAPLLVLANKQ 136
           EDLQGAPLLVLANKQ
Sbjct: 121 EDLQGAPLLVLANKQ 135

[Close]
BLAST of Carg22092 vs. NCBI nr
Match: XP_004140779.1 (PREDICTED: ADP-ribosylation factor-related protein 1 isoform X2 [Cucumis sativus] >KGN57362.1 hypothetical protein Csa_3G181980 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 4.5e-70
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSLFYGLWKY+FSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI
Sbjct: 1   MFSLFYGLWKYLFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH
Sbjct: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120

Query: 121 EDLQGAPLLVLANKQ 136
           EDLQGAPLLVLANKQ
Sbjct: 121 EDLQGAPLLVLANKQ 135

[Close]
BLAST of Carg22092 vs. NCBI nr
Match: XP_008439194.1 (PREDICTED: ADP-ribosylation factor-related protein 1 isoform X1 [Cucumis melo] >XP_008439195.1 PREDICTED: ADP-ribosylation factor-related protein 1 isoform X1 [Cucumis melo] >XP_016899043.1 PREDICTED: ADP-ribosylation factor-related protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 4.5e-70
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSLFYGLWKY+FSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI
Sbjct: 1   MFSLFYGLWKYLFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH
Sbjct: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120

Query: 121 EDLQGAPLLVLANKQ 136
           EDLQGAPLLVLANKQ
Sbjct: 121 EDLQGAPLLVLANKQ 135

[Close]
BLAST of Carg22092 vs. TAIR10
Match: AT5G52210.1 (GTP-binding protein 1)

HSP 1 Score: 238.0 bits (606), Expect = 3.8e-63
Identity = 115/139 (82.73%), Postives = 127/139 (91.37%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSL  GLW Y+FSKTEF+VLILGIDKAGKTT LEKLK++YS  EGL  DRIVPTVGLNI
Sbjct: 1   MFSLMSGLWSYMFSKTEFNVLILGIDKAGKTTFLEKLKTIYSISEGLPHDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GR+EV NAK+VFWDLGGQPGLRSIWEKYYEEAHA+IY+IDAACP++FEDSKSALEK LRH
Sbjct: 61  GRIEVSNAKIVFWDLGGQPGLRSIWEKYYEEAHALIYLIDAACPTRFEDSKSALEKALRH 120

Query: 121 EDLQGAPLLVLANKQVRTS 140
           EDLQGAPLL+LANKQ  T+
Sbjct: 121 EDLQGAPLLILANKQDLTN 139

[Close]
BLAST of Carg22092 vs. TAIR10
Match: AT5G67560.1 (ADP-ribosylation factor-like A1D)

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-21
Identity = 53/135 (39.26%), Postives = 76/135 (56.30%), Query Frame = 0 

Query: 7   GLW-------KYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLN 66
           GLW       + +F K E  + ++G+  AGKT+L+  + +      G S D ++PTVG N
Sbjct: 2   GLWDALLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVAT-----GGYSED-MIPTVGFN 61

Query: 67  IGRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLR 126
           + ++   +  +  WDLGGQP  RS+WE+Y     A++YV+DAA P     SKS L  +L 
Sbjct: 62  MRKVTKGSVTIKLWDLGGQPRFRSMWERYCRSVSAIVYVVDAADPDNLSVSKSELHDLLS 121

Query: 127 HEDLQGAPLLVLANK 135
              L G PLLVL NK
Sbjct: 122 KTSLNGIPLLVLGNK 130

[Close]
BLAST of Carg22092 vs. TAIR10
Match: AT3G49870.1 (ADP-ribosylation factor-like A1C)

HSP 1 Score: 98.6 bits (244), Expect = 3.6e-21
Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           +   F    + +F K E  + ++G+  AGKT+L+  + +      G S D ++PTVG N+
Sbjct: 3   LLEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVAT-----GGYSED-MIPTVGFNM 62

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
            ++   N  +  WDLGGQP  RS+WE+Y     A++YV+DAA P     SKS L  +L  
Sbjct: 63  RKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSK 122

Query: 121 EDLQGAPLLVLANK 135
             L G PLLVL NK
Sbjct: 123 TSLNGIPLLVLGNK 130

[Close]
BLAST of Carg22092 vs. TAIR10
Match: AT3G22950.1 (ADP-ribosylation factor C1)

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-21
Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 0 

Query: 9   WKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNIGRLEVLNA 68
           W  +F   E+ ++++G+D AGKTT L KL     +L  +      PTVG N+  L   N 
Sbjct: 9   WFMMFPAKEYKIVVVGLDNAGKTTTLYKL-----HLGEVVTTH--PTVGSNVEELVYKNI 68

Query: 69  KLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRHEDLQGAPL 128
           +   WDLGGQ  LR+ W  YY   HAVI VID+   ++    K  L ++L HEDLQ + +
Sbjct: 69  RFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISFMKDELARLLGHEDLQNSVI 128

Query: 129 LVLANKQ 136
           LV ANKQ
Sbjct: 129 LVFANKQ 128

[Close]
BLAST of Carg22092 vs. TAIR10
Match: AT2G24765.1 (ADP-ribosylation factor 3)

HSP 1 Score: 95.1 bits (235), Expect = 4.0e-20
Identity = 48/132 (36.36%), Postives = 76/132 (57.58%), Query Frame = 0 

Query: 4   LFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNIGRL 63
           LF  ++  +F   E  +L+LG+D AGKTT+L +L+      E +S    +PT+G N+  +
Sbjct: 4   LFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQM----GEVVS---TIPTIGFNVETV 63

Query: 64  EVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRHEDL 123
           +  N K   WDLGGQ  +R  W  Y+    AVIYV+D++   +   +K     +L  ++L
Sbjct: 64  QYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDEL 123

Query: 124 QGAPLLVLANKQ 136
           +GA +L+ ANKQ
Sbjct: 124 KGAVVLIFANKQ 128

[Close]
BLAST of Carg22092 vs. Swiss-Prot
Match: sp|Q8BXL7|ARFRP_MOUSE (ADP-ribosylation factor-related protein 1 OS=Mus musculus OX=10090 GN=Arfrp1 PE=1 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-36
Identity = 74/136 (54.41%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYS-NLEGLSPDRIVPTVGLN 60
           M++L  GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+S  +I  TVGLN
Sbjct: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60

Query: 61  IGRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLR 120
           IG ++V  A+L+FWDLGGQ  L+S+W+KYY E H VIYVID+    +  +SK A EKV+ 
Sbjct: 61  IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVS 120

Query: 121 HEDLQGAPLLVLANKQ 136
            E L G P+LVLANKQ
Sbjct: 121 SEALDGVPILVLANKQ 136

[Close]
BLAST of Carg22092 vs. Swiss-Prot
Match: sp|Q63055|ARFRP_RAT (ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus OX=10116 GN=Arfrp1 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-36
Identity = 74/136 (54.41%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYS-NLEGLSPDRIVPTVGLN 60
           M++L  GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+S  +I  TVGLN
Sbjct: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60

Query: 61  IGRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLR 120
           IG ++V  A+L+FWDLGGQ  L+S+W+KYY E H VIYVID+    +  +SK A EKV+ 
Sbjct: 61  IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVS 120

Query: 121 HEDLQGAPLLVLANKQ 136
            E L G P+LVLANKQ
Sbjct: 121 SEALDGVPILVLANKQ 136

[Close]
BLAST of Carg22092 vs. Swiss-Prot
Match: sp|Q32LJ2|ARFRP_BOVIN (ADP-ribosylation factor-related protein 1 OS=Bos taurus OX=9913 GN=ARFRP1 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.8e-36
Identity = 74/136 (54.41%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYS-NLEGLSPDRIVPTVGLN 60
           M++L  GL+KY+F K E+ VLILG+D AGKTT LE+ K+ ++ N +G+S  +I  TVGLN
Sbjct: 1   MYTLLSGLYKYMFQKDEYCVLILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60

Query: 61  IGRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLR 120
           IG ++V  A+L+FWDLGGQ  L+S+W+KYY E H VIYVID+    +  +SK A EK++ 
Sbjct: 61  IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKQAFEKMVT 120

Query: 121 HEDLQGAPLLVLANKQ 136
            E L G P+LVLANKQ
Sbjct: 121 SEALDGVPILVLANKQ 136

[Close]
BLAST of Carg22092 vs. Swiss-Prot
Match: sp|Q13795|ARFRP_HUMAN (ADP-ribosylation factor-related protein 1 OS=Homo sapiens OX=9606 GN=ARFRP1 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.4e-36
Identity = 74/136 (54.41%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYS-NLEGLSPDRIVPTVGLN 60
           M++L  GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+S  +I  TVGLN
Sbjct: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60

Query: 61  IGRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLR 120
           IG ++V  A+L+FWDLGGQ  L+S+W+KYY E H VIYVID+    +  +SK A EKV+ 
Sbjct: 61  IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120

Query: 121 HEDLQGAPLLVLANKQ 136
            E L G P+LVLANKQ
Sbjct: 121 SEALCGVPVLVLANKQ 136

[Close]
BLAST of Carg22092 vs. Swiss-Prot
Match: sp|Q5R579|ARFRP_PONAB (ADP-ribosylation factor-related protein 1 OS=Pongo abelii OX=9601 GN=ARFRP1 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.4e-36
Identity = 74/136 (54.41%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYS-NLEGLSPDRIVPTVGLN 60
           M++L  GL+KY+F K E+ +LILG+D AGKTT LE+ K+ ++ N +G+S  +I  TVGLN
Sbjct: 1   MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLN 60

Query: 61  IGRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLR 120
           IG ++V  A+L+FWDLGGQ  L+S+W+KYY E H VIYVID+    +  +SK A EKV+ 
Sbjct: 61  IGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVT 120

Query: 121 HEDLQGAPLLVLANKQ 136
            E L G P+LVLANKQ
Sbjct: 121 SEALCGVPVLVLANKQ 136

[Close]
BLAST of Carg22092 vs. TrEMBL
Match: tr|A0A1S3AY63|A0A1S3AY63_CUCME (ADP-ribosylation factor-related protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484067 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.0e-70
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSLFYGLWKY+FSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI
Sbjct: 1   MFSLFYGLWKYLFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH
Sbjct: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120

Query: 121 EDLQGAPLLVLANKQ 136
           EDLQGAPLLVLANKQ
Sbjct: 121 EDLQGAPLLVLANKQ 135

[Close]
BLAST of Carg22092 vs. TrEMBL
Match: tr|A0A1S3AYV2|A0A1S3AYV2_CUCME (ADP-ribosylation factor-related protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484067 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.0e-70
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSLFYGLWKY+FSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI
Sbjct: 1   MFSLFYGLWKYLFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH
Sbjct: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120

Query: 121 EDLQGAPLLVLANKQ 136
           EDLQGAPLLVLANKQ
Sbjct: 121 EDLQGAPLLVLANKQ 135

[Close]
BLAST of Carg22092 vs. TrEMBL
Match: tr|A0A0A0L9R1|A0A0A0L9R1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G181980 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.0e-70
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSLFYGLWKY+FSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI
Sbjct: 1   MFSLFYGLWKYLFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH
Sbjct: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120

Query: 121 EDLQGAPLLVLANKQ 136
           EDLQGAPLLVLANKQ
Sbjct: 121 EDLQGAPLLVLANKQ 135

[Close]
BLAST of Carg22092 vs. TrEMBL
Match: tr|A0A2I4FGT3|A0A2I4FGT3_9ROSI (ADP-ribosylation factor-related protein 1 OS=Juglans regia OX=51240 GN=LOC108998666 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.4e-67
Identity = 127/135 (94.07%), Postives = 132/135 (97.78%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSLFYGLWKY+FSKTEFHVLILGIDKAGKTTLLEKLKS+YSNLEGL PDRIVPTVGLNI
Sbjct: 1   MFSLFYGLWKYMFSKTEFHVLILGIDKAGKTTLLEKLKSVYSNLEGLPPDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GR+EV NAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPS+FEDSKSALEK LRH
Sbjct: 61  GRIEVSNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSRFEDSKSALEKALRH 120

Query: 121 EDLQGAPLLVLANKQ 136
           EDLQGAPLL+LANKQ
Sbjct: 121 EDLQGAPLLILANKQ 135

[Close]
BLAST of Carg22092 vs. TrEMBL
Match: tr|A0A067JEK0|A0A067JEK0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26132 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 5.2e-67
Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 0 

Query: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNI 60
           MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGL PDRIVPTVGLNI
Sbjct: 1   MFSLFYGLWKYIFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLPPDRIVPTVGLNI 60

Query: 61  GRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRH 120
           GR+EV N KLVFWDLGGQPGLRSIWEKYYEEAHAVI++IDA CPS+FEDSKSALEKVLRH
Sbjct: 61  GRIEVSNTKLVFWDLGGQPGLRSIWEKYYEEAHAVIFIIDATCPSRFEDSKSALEKVLRH 120

Query: 121 EDLQGAPLLVLANKQ 136
           EDLQGAPLL+LANKQ
Sbjct: 121 EDLQGAPLLILANKQ 135

The following BLAST results are available for this feature:
BLAST of Carg22092 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022944816.12.6e-70100.00ADP-ribosylation factor-related protein 1 [Cucurbita moschata] >XP_022944817.1 A... [more]
XP_022968222.12.6e-70100.00ADP-ribosylation factor-related protein 1 [Cucurbita maxima] >XP_022968223.1 ADP... [more]
XP_004140778.14.5e-7099.26PREDICTED: ADP-ribosylation factor-related protein 1 isoform X1 [Cucumis sativus... [more]
XP_004140779.14.5e-7099.26PREDICTED: ADP-ribosylation factor-related protein 1 isoform X2 [Cucumis sativus... [more]
XP_008439194.14.5e-7099.26PREDICTED: ADP-ribosylation factor-related protein 1 isoform X1 [Cucumis melo] >... [more]
BLAST of Carg22092 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52210.13.8e-6382.73GTP-binding protein 1[more]
AT5G67560.12.1e-2139.26ADP-ribosylation factor-like A1D[more]
AT3G49870.13.6e-2138.81ADP-ribosylation factor-like A1C[more]
AT3G22950.16.1e-2141.73ADP-ribosylation factor C1[more]
AT2G24765.14.0e-2036.36ADP-ribosylation factor 3[more]
BLAST of Carg22092 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8BXL7|ARFRP_MOUSE2.2e-3654.41ADP-ribosylation factor-related protein 1 OS=Mus musculus OX=10090 GN=Arfrp1 PE=... [more]
sp|Q63055|ARFRP_RAT2.2e-3654.41ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus OX=10116 GN=Arfrp... [more]
sp|Q32LJ2|ARFRP_BOVIN3.8e-3654.41ADP-ribosylation factor-related protein 1 OS=Bos taurus OX=9913 GN=ARFRP1 PE=2 S... [more]
sp|Q13795|ARFRP_HUMAN8.4e-3654.41ADP-ribosylation factor-related protein 1 OS=Homo sapiens OX=9606 GN=ARFRP1 PE=1... [more]
sp|Q5R579|ARFRP_PONAB8.4e-3654.41ADP-ribosylation factor-related protein 1 OS=Pongo abelii OX=9601 GN=ARFRP1 PE=2... [more]
BLAST of Carg22092 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AY63|A0A1S3AY63_CUCME3.0e-7099.26ADP-ribosylation factor-related protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A1S3AYV2|A0A1S3AYV2_CUCME3.0e-7099.26ADP-ribosylation factor-related protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A0A0L9R1|A0A0A0L9R1_CUCSA3.0e-7099.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G181980 PE=3 SV=1[more]
tr|A0A2I4FGT3|A0A2I4FGT3_9ROSI2.4e-6794.07ADP-ribosylation factor-related protein 1 OS=Juglans regia OX=51240 GN=LOC108998... [more]
tr|A0A067JEK0|A0A067JEK0_JATCU5.2e-6793.33Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26132 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR024156Small_GTPase_ARF
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22092-RACarg22092-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..155
e-value: 7.0E-12
score: 55.5
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 19..148
e-value: 2.5E-39
score: 136.5
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 10..135
NoneNo IPR availablePANTHERPTHR11711:SF218SUBFAMILY NOT NAMEDcoord: 10..135
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 17..135
e-value: 7.6E-17
score: 59.5
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 12..138
e-value: 5.5E-37
score: 126.8
IPR024156Small GTPase superfamily, ARF typePROSITEPS51417ARFcoord: 11..155
score: 15.355
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..141