Carg20961 (gene) Silver-seed gourd

Overview
NameCarg20961
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUbiquitin-conjugating enzyme E2
LocationCucurbita_argyrosperma_scaffold_170 : 57080 .. 60738 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCCCTCAATTTTGTCATCGGAGAGGCCTCTCGAGGTTTCAGTCCATGGCGTCGAAGCGGATCCTGAAAGAGCTCAAGGATCTCCAGAAAGATCCCCCTACTTCCTGTAGCGCTGGTTCAGTATTCTTTCTACTCTGGTTCCCTTTACTATCTACTATTCTTCACTTTTTAAGGTCGATCTAGTGATTGCGTTCTTACATCGAGCATCGGAGACTTCAAGCAACTTTGTTCTTGGCCTGTTATTTGGAAATTAAGTGGATCCAAATGTTTGTTTGTGGATTGCGTGAAATAGTATCAACTCTGAAATTCAATTATCATGTTCACAATATGCTAACCATTCCGAAGTCTAGGAAAATCGGTTTTGGACTTCGTACCACTCACTTGCTATCTCAAATTTAGGGTCTAAGTACGGAATTTGGTTTGCGTTGGCTCTTATCAGAATAATTGATCATATTGTGGAATGGAATTAGGAAATATAGAAACTAAAGGATGCATTATAGTTCGATCTATCGCATATGCTAAGCTTGTTGAAACAAGGCTCTATCGAATAGGAAACTATAGATACCGGTGGATCTGTTTTACTATAGTCTAGTACTCTAAAGCGTTATTCTAAGAATCTTCAAGTTTAAAACCATGTTGATTTAAAATGGAACTAGACTCAGAACGGTGTAATCGCTTAAGATTTAAGTAAGAGATTATAAATCTACGCTCTGTGTTGATGATTAAATTTTTGTCCGAATAAGTAGTCTGCTATTACCAACAAGGTGTTTTATTAAACCTATTTTGTTTTCTCTTCTGGATGGATCAAAATTTCCCTCGAAGTTCATAATTATAAGACAAGATGTTCTGTAACACAGGTCCTGTTGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGTCCTCCAGACAGTCCTTATGCAGGAGGCGTTTTTTTAATTACTATTCACTTCCCTCCCGACTATCCATTTAAGCCTCCTAAGGTACGCTGTTAAATCTTACGTATTTGGTTATATTCAATATTTTTAATTCAATAACATTGTAAATTTCTGTAGCCCGTTATTTCTGCTTTTATCATTCAAATAAGTTGTTACTATATGTGGTTTTTGTTTCACTAATTATTCTAGTGGCTACAATATGTGTTTGTTGTCACTGTTTTTAATAATTATTTAATTAATAACTCAACGAAGTCAGAGAAAGAAGCTGTTTACACACTTTTTGATCTAAACAGTTCAGTTGCTATTGCTTAACCCTGTCGATTATTTTTTGAGATTGTTCAGGAAAATAGTTTAATATCTGGTATCTGAAAATTATATTTTGTGACAGATGTATTGACCATACAAAGGCCGCACTTTGAAAACTTAGTATATAAACCACATATCTCATTGGAGGTTTATTGGAAGTTTTCTGCACATTTTTCATGTGAATATGATTTGCATGTTATTTCTGTCAAATGTGCTTACTGCCTATTTTACCATAGTAAGCACCATCTGTAGTTAAATGTAAAAACTTGATTTGGGGGAGATAAGTGTAATGACTTGATTTAGGTGAGACGAGTATAAAAACTTAATTTCAGGAATGTTCCCTTGGTGGATGGAGCGTCCTTGTTCTTGATTTTGTAATGCTAGAGTGTAAACCTTGGGTTTGGCTCTTAATTTCAGGAATTTTATCTGATCTAATTTTGAAACCATAGGTTCTTTATATGGACCCTAAATCCTATGCATGGTGGGCTGATTACACCTGACAGACTTCAGGGTAGAAATCCTAAGATCTCCGTCTCACTTGAGTGGTGCAATGTGTGCACGGATCTAATTTTGAAGCTGCCGTACCATTTGTTTTTGTGGTGCCCTTGTCCTTTTGAGCATGTGGAGGTGTATTTTCTTTGATATTTCAGTTTCCAGGTGGTTTTCTACATCAAAATTTTATTCTTGTATGAGGAGGTCATCCATTTGAATAAAAGACTAACTATCAATGTCACCTTTTGGGAGATTTGGCTGGAAAGAAATAGCAGAACTTTTCAAGGGATACATGTGGTTTTCTTAATGCAACGTTGAGATCTTATTAGGAGGGCTTTTGATTGGCTTTTGCTAATTAGAGACTGTTTTTGCTTCCCTCATTGGCTATATTGGGGGAAGAAGTCTCATCTCTCCCTTCTCTTCTGTTTTCCTTCTTCCTTGATATTTTTTTTTTCTGTTTTTGAGCTTGTATTATTATTGCTATGTATCATTAATTATGTGACTTTATATAGGGAGTTTTTTACCTATAGCTTTTTACGTTATTTCATTTATTATTTGCTTAGGTTGCTTTCAGGACAAAGGTTTTTCACCCAAACATCAACAGTAATGGTAGTATTTGCCTGGACATCTTGAAAGAGCAATGGAGTCCAGCTTTGACTATATCAAAGGTTTTGACCTCTCGACAATTTTACCATTCAAATCCTAGATTTTTGAATGCCATTATCTTATGCCTCATTTGCACCATGGCTTTTTGGATCAAGTTCTTTGAATTAACTGTGGTCACTATTTACGATTTTGTTACCTAACTAGGGATTCGAGACACTAATCTGATATACTTATCTTAAAGAAGAAAAGTTTTTATTTTTTTTTATTTTTATTTTTTACAATTATAATTAGAGTGCTCATATCTGATATACTCATGTACAGTTGTATTAATAATCTTCAATCGTAGTAATATTCAATCCAAATTGTAAATGAAGCAGTCATAATATTAAAATTGCAAATCCAAGAACTCGTTATGTCAAAACACAGCTAAGCTATCAACTTAGGACCAACTACTGAAAAAGTAAGTTGGCAACTATATTTGAAACACAACAAGAGTCTGGAGCATACAAAATGCAGACATACTGCTTTTGCCATCAAAACCTTGGTGGGGAAGGAGAGGATGGGTGACAGCATGATATTCTGGTTAGATTTCAATTTTGTGTGAAGCTGTAAACTTTTAAGGGTTACTTTTCATTTAAGTAGTGCCATGAGTATCATCAAGTGGCCGCTGTCCAGTGTTGACATGGGGAGACCATAGTATGTTTTTCTGAGATAGTCTATTTCCCTCCGCTAAAAAAAATCCAGACATTTCCTTAAGATGTAGATTGTGTACGGCATCTTATTTTAGAATATTGAGACCATTTTCTGATCTTCAGCGTCTTTGGTAAGCGTTATTGAGAATAGAGAGTGACTGTCAATCATTTTCCGCATATCAATTTCACTATTTTCCAAGCTTTGACTTATGCCATATGCAGTTTTTAAGTGGTTGGGAAGGGTTCTTGTTTCATATTCAGGTGTTGCTTTCTATTTGCTCCCTTTTGACCGATGCGAACCCAGATGATCCACTAGTGCCAGAAATTGCTCATCTGTACAAGACGGATAGGGCCAAGTATGAGACAACTGCAAGGAGCTGGACTCAAAAATATGCTATGGGCTAGTATGTATTATGGGAAGGGCATGAAGGATGCTGCTGTTAGTTCTTATGTATAAATGAAAGTTTTCTGTACAATCTACTATTGTTGGAGATTGAAACAATTTTATGCTGCCCAATTTAAAATCAACATGATGCTTTAAGCTTGTGTTCAACTAATATATATATCAATTATATGGATTTGGTTTCGTACAGTTCCATGACCTGTGATTCTTCATCCTAGA

mRNA sequence

CCCCCCTCAATTTTGTCATCGGAGAGGCCTCTCGAGGTTTCAGTCCATGGCGTCGAAGCGGATCCTGAAAGAGCTCAAGGATCTCCAGAAAGATCCCCCTACTTCCTGTAGCGCTGGTCCTGTTGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGTCCTCCAGACAGTCCTTATGCAGGAGGCGTTTTTTTAATTACTATTCACTTCCCTCCCGACTATCCATTTAAGCCTCCTAAGGTTGCTTTCAGGACAAAGGTTTTTCACCCAAACATCAACAGTAATGGTAGTATTTGCCTGGACATCTTGAAAGAGCAATGGAGTCCAGCTTTGACTATATCAAAGGTGTTGCTTTCTATTTGCTCCCTTTTGACCGATGCGAACCCAGATGATCCACTAGTGCCAGAAATTGCTCATCTGTACAAGACGGATAGGGCCAAGTATGAGACAACTGCAAGGAGCTGGACTCAAAAATATGCTATGGGCTAGTATGTATTATGGGAAGGGCATGAAGGATGCTGCTGTTAGTTCTTATGTATAAATGAAAGTTTTCTGTACAATCTACTATTGTTGGAGATTGAAACAATTTTATGCTGCCCAATTTAAAATCAACATGATGCTTTAAGCTTGTGTTCAACTAATATATATATCAATTATATGGATTTGGTTTCGTACAGTTCCATGACCTGTGATTCTTCATCCTAGA

Coding sequence (CDS)

ATGGCGTCGAAGCGGATCCTGAAAGAGCTCAAGGATCTCCAGAAAGATCCCCCTACTTCCTGTAGCGCTGGTCCTGTTGCTGAAGATATGTTTCATTGGCAAGCAACAATTATGGGTCCTCCAGACAGTCCTTATGCAGGAGGCGTTTTTTTAATTACTATTCACTTCCCTCCCGACTATCCATTTAAGCCTCCTAAGGTTGCTTTCAGGACAAAGGTTTTTCACCCAAACATCAACAGTAATGGTAGTATTTGCCTGGACATCTTGAAAGAGCAATGGAGTCCAGCTTTGACTATATCAAAGGTGTTGCTTTCTATTTGCTCCCTTTTGACCGATGCGAACCCAGATGATCCACTAGTGCCAGAAATTGCTCATCTGTACAAGACGGATAGGGCCAAGTATGAGACAACTGCAAGGAGCTGGACTCAAAAATATGCTATGGGCTAG

Protein sequence

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHLYKTDRAKYETTARSWTQKYAMG
Homology
[Close]
BLAST of Carg20961 vs. NCBI nr
Match: XP_004133832.1 (PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis sativus] >XP_008437957.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Cucumis melo] >XP_022924565.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita moschata] >XP_023526807.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo] >ADN34166.1 ubiquitin conjugating enzyme [Cucumis melo subsp. melo] >KGN56459.1 hypothetical protein Csa_3G120380 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 1.1e-81
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAHLYKTDRAKYETTARSWTQKYAMG
Sbjct: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. NCBI nr
Match: XP_022147328.1 (ubiquitin-conjugating enzyme E2-17 kDa-like isoform X1 [Momordica charantia])

HSP 1 Score: 311.6 bits (797), Expect = 1.4e-81
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAHLYKTDRAKYETTARSWTQKYAMG
Sbjct: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. NCBI nr
Match: KJB39134.1 (hypothetical protein B456_007G025200, partial [Gossypium raimondii])

HSP 1 Score: 308.9 bits (790), Expect = 9.2e-81
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDY
Sbjct: 30  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 89

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 90  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 149

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDRAKYETTARSWTQKYAMG
Sbjct: 150 PEIAHMYKTDRAKYETTARSWTQKYAMG 177

[Close]
BLAST of Carg20961 vs. NCBI nr
Match: XP_003633968.1 (PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Vitis vinifera] >XP_007218561.1 ubiquitin-conjugating enzyme E2-17 kDa [Prunus persica] >XP_008233222.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Prunus mume] >XP_010109445.1 ubiquitin-conjugating enzyme E2-17 kDa [Morus notabilis] >XP_010661877.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Vitis vinifera] >XP_012488739.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Gossypium raimondii] >XP_012488740.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Gossypium raimondii] >XP_015888845.1 ubiquitin-conjugating enzyme E2-17 kDa [Ziziphus jujuba] >XP_015889380.1 ubiquitin-conjugating enzyme E2-17 kDa [Ziziphus jujuba] >XP_016710561.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Gossypium hirsutum] >XP_016710562.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Gossypium hirsutum] >XP_017612195.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Gossypium arboreum] >XP_018813336.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Juglans regia] >XP_018827925.1 PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Juglans regia] >XP_020573477.1 ubiquitin-conjugating enzyme E2-17 kDa [Phalaenopsis equestris] >XP_020696552.1 ubiquitin-conjugating enzyme E2-17 kDa [Dendrobium catenatum] >XP_020701147.1 ubiquitin-conjugating enzyme E2-17 kDa [Dendrobium catenatum] >XP_020701148.1 ubiquitin-conjugating enzyme E2-17 kDa [Dendrobium catenatum] >XP_021807991.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Prunus avium] >CAN77754.1 hypothetical protein VITISV_039341 [Vitis vinifera] >CAN81281.1 hypothetical protein VITISV_016558 [Vitis vinifera] >CBI32888.3 unnamed protein product, partial [Vitis vinifera] >CBI40471.3 unnamed protein product, partial [Vitis vinifera] >EXC22515.1 Ubiquitin-conjugating enzyme E2-17 kDa [Morus notabilis] >KJB39127.1 hypothetical protein B456_007G025200 [Gossypium raimondii] >KJB39130.1 hypothetical protein B456_007G025200 [Gossypium raimondii] >KJB39131.1 hypothetical protein B456_007G025200 [Gossypium raimondii] >KJB39133.1 hypothetical protein B456_007G025200 [Gossypium raimondii] >ONI23343.1 hypothetical protein PRUPE_2G183100 [Prunus persica] >PON34138.1 Ubiquitin-fold modifier-conjugating enzyme [Parasponia andersonii] >PON81834.1 Ubiquitin-fold modifier-conjugating enzyme [Trema orientalis])

HSP 1 Score: 308.9 bits (790), Expect = 9.2e-81
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDRAKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. NCBI nr
Match: XP_016686350.1 (PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Gossypium hirsutum])

HSP 1 Score: 308.1 bits (788), Expect = 1.6e-80
Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGPPDSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDRAKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. TAIR10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10)

HSP 1 Score: 299.3 bits (765), Expect = 1.3e-81
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTD+ KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. TAIR10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9)

HSP 1 Score: 298.5 bits (763), Expect = 2.3e-81
Identity = 139/148 (93.92%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFL+TIHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTD+ KYE+TAR+WTQKYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178

[Close]
BLAST of Carg20961 vs. TAIR10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11)

HSP 1 Score: 297.0 bits (759), Expect = 6.6e-81
Identity = 136/148 (91.89%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGPP+SPYAGGVFL++IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDR+KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. TAIR10
Match: AT5G41700.4 (ubiquitin conjugating enzyme 8)

HSP 1 Score: 293.1 bits (749), Expect = 9.5e-80
Identity = 139/149 (93.29%), Postives = 144/149 (96.64%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSC-SAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPD 60
           MASKRILKELKDLQKDPPTSC  AGPVAEDMFHWQATIMGP +SPY+GGVFL+TIHFPPD
Sbjct: 1   MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60

Query: 61  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPL 120
           YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPL
Sbjct: 61  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120

Query: 121 VPEIAHLYKTDRAKYETTARSWTQKYAMG 149
           VPEIAH+YKTDRAKYE TAR+WTQKYAMG
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYAMG 149

[Close]
BLAST of Carg20961 vs. TAIR10
Match: AT5G56150.1 (ubiquitin-conjugating enzyme 30)

HSP 1 Score: 283.9 bits (725), Expect = 5.8e-77
Identity = 130/148 (87.84%), Postives = 140/148 (94.59%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRI KEL+DLQ+DPP SCSAGP  +DMF WQATIMGP DSP+AGGVFL+TIHFPPDY
Sbjct: 1   MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDR KYE+TA+SWTQKYAMG
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. Swiss-Prot
Match: sp|P35135|UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 7.4e-82
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFL++IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDRAKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. Swiss-Prot
Match: sp|Q94F47|UBC28_ARATH (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-81
Identity = 141/148 (95.27%), Postives = 146/148 (98.65%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDRAKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. Swiss-Prot
Match: sp|Q8S919|UBC5B_ORYSJ (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-80
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGP DSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVA +TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDRAKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. Swiss-Prot
Match: sp|P35131|UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-80
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDRAKYE TAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. Swiss-Prot
Match: sp|P35133|UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 2.4e-80
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTD+ KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. TrEMBL
Match: tr|A0A1S3AVT6|A0A1S3AVT6_CUCME (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucumis melo OX=3656 GN=LOC103483220 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 7.2e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAHLYKTDRAKYETTARSWTQKYAMG
Sbjct: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. TrEMBL
Match: tr|E5GCG7|E5GCG7_CUCME (Ubiquitin conjugating enzyme OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 7.2e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAHLYKTDRAKYETTARSWTQKYAMG
Sbjct: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. TrEMBL
Match: tr|A0A0A0L608|A0A0A0L608_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120380 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 7.2e-82
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAHLYKTDRAKYETTARSWTQKYAMG
Sbjct: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. TrEMBL
Match: tr|A0A2I4E1R4|A0A2I4E1R4_9ROSI (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Juglans regia OX=51240 GN=LOC108985485 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 6.1e-81
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDRAKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]
BLAST of Carg20961 vs. TrEMBL
Match: tr|M5XL40|M5XL40_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G183100 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 6.1e-81
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFL+TIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD NPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHLYKTDRAKYETTARSWTQKYAMG 149
           PEIAH+YKTDRAKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

The following BLAST results are available for this feature:
BLAST of Carg20961 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004133832.11.1e-81100.00PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis sativus] >XP_00843795... [more]
XP_022147328.11.4e-8199.32ubiquitin-conjugating enzyme E2-17 kDa-like isoform X1 [Momordica charantia][more]
KJB39134.19.2e-8197.97hypothetical protein B456_007G025200, partial [Gossypium raimondii][more]
XP_003633968.19.2e-8197.97PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Vitis vinifera] >XP_007218561... [more]
XP_016686350.11.6e-8097.30PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like [Gossypium hirsutum][more]
BLAST of Carg20961 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53300.11.3e-8194.59ubiquitin-conjugating enzyme 10[more]
AT4G27960.22.3e-8193.92ubiquitin conjugating enzyme 9[more]
AT3G08690.16.6e-8191.89ubiquitin-conjugating enzyme 11[more]
AT5G41700.49.5e-8093.29ubiquitin conjugating enzyme 8[more]
AT5G56150.15.8e-7787.84ubiquitin-conjugating enzyme 30[more]
BLAST of Carg20961 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P35135|UBC4_SOLLC7.4e-8296.62Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
sp|Q94F47|UBC28_ARATH2.2e-8195.27Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1... [more]
sp|Q8S919|UBC5B_ORYSJ1.4e-8094.59Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=U... [more]
sp|P35131|UBC8_ARATH1.4e-8094.59Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S... [more]
sp|P35133|UBC10_ARATH2.4e-8094.59Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1... [more]
BLAST of Carg20961 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AVT6|A0A1S3AVT6_CUCME7.2e-82100.00ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucumis melo OX=3656 GN=LOC103483... [more]
tr|E5GCG7|E5GCG7_CUCME7.2e-82100.00Ubiquitin conjugating enzyme OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
tr|A0A0A0L608|A0A0A0L608_CUCSA7.2e-82100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120380 PE=3 SV=1[more]
tr|A0A2I4E1R4|A0A2I4E1R4_9ROSI6.1e-8197.97ubiquitin-conjugating enzyme E2-17 kDa-like OS=Juglans regia OX=51240 GN=LOC1089... [more]
tr|M5XL40|M5XL40_PRUPE6.1e-8197.97Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G183100 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023313UBQ-conjugating_AS
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20961-RACarg20961-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..147
e-value: 3.1E-79
score: 279.2
NoneNo IPR availablePANTHERPTHR24068:SF68SUBFAMILY NOT NAMEDcoord: 1..148
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 1..148
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 1..148
e-value: 1.5E-74
score: 251.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILYSSF54495UBC-likecoord: 2..147
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 5..141
e-value: 3.9E-53
score: 178.8
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 4..136
score: 48.068
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 3..142
e-value: 4.73388E-73
score: 216.685
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 74..89

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg20961Cla021188Watermelon (97103) v1carwmB0487
Carg20961Cla004222Watermelon (97103) v1carwmB0488
Carg20961Csa3G120380Cucumber (Chinese Long) v2carcuB0522
Carg20961MELO3C006972Melon (DHL92) v3.5.1carmeB0498
Carg20961MELO3C006058Melon (DHL92) v3.5.1carmeB0497
Carg20961ClCG05G008640Watermelon (Charleston Gray)carwcgB0475
Carg20961ClCG05G001060Watermelon (Charleston Gray)carwcgB0474
Carg20961CSPI03G08260Wild cucumber (PI 183967)carcpiB0529
Carg20961Cucsa.258910Cucumber (Gy14) v1carcgyB0564
Carg20961CmaCh00G003320Cucurbita maxima (Rimu)carcmaB0682
Carg20961CmoCh14G021450Cucurbita moschata (Rifu)carcmoB0664
Carg20961Cp4.1LG14g06590Cucurbita pepo (Zucchini)carcpeB0690
Carg20961Cp4.1LG03g16290Cucurbita pepo (Zucchini)carcpeB0691
Carg20961Cp4.1LG08g01090Cucurbita pepo (Zucchini)carcpeB0693
Carg20961CsGy3G008390Cucumber (Gy14) v2carcgybB0499
Carg20961MELO3C006058.2Melon (DHL92) v3.6.1carmedB0503
Carg20961Cla97C05G081360Watermelon (97103) v2carwmbB0513
Carg20961Bhi01G000311Wax gourdcarwgoB0595
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg20961Carg20871Silver-seed gourdcarcarB477
The following block(s) are covering this gene:
GeneOrganismBlock
Carg20961Cucumber (Gy14) v1carcgyB0563
Carg20961Cucurbita maxima (Rimu)carcmaB0683
Carg20961Cucurbita maxima (Rimu)carcmaB0685
Carg20961Cucurbita moschata (Rifu)carcmoB0665
Carg20961Wild cucumber (PI 183967)carcpiB0530
Carg20961Cucumber (Chinese Long) v3carcucB0528
Carg20961Bottle gourd (USVL1VR-Ls)carlsiB444
Carg20961Bottle gourd (USVL1VR-Ls)carlsiB445
Carg20961Melon (DHL92) v3.5.1carmeB0496
Carg20961Melon (DHL92) v3.6.1carmedB0502
Carg20961Watermelon (Charleston Gray)carwcgB0476