Carg20871 (gene) Silver-seed gourd

Overview
NameCarg20871
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUbiquitin conjugating enzyme E2-like
LocationCucurbita_argyrosperma_scaffold_141 : 43832 .. 48812 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCGAAACGGATCCTGAAGGAGATCAATGATCTCCAGAAAGATCCTTCTACTTCCTGCAGTGGTGGTTTAGTATTCTTTCTACTCTTGTTCCTTTTTACTATCTCTCTCTCTATATTTTTTTTCTCACTTTCTAAGATTGGTCTAGTGATTACGTTTTTCATCGGTTATTGGAGACTCCGAGCAACTTCGTTGTTGTTCTTTTATTTGGAAATTAAGTGGATCCAAATGTTTGTTTGTGGATTGCGTGAAAAAGTAACAACTCTGAAATTCAATTATCATGTTTGTAATTATCTAAGCATGCGGAGGTCTACGAAAATCGGTTTCGGAGTTCTTAGCACTGATTTGCATTCTCAATCTTGTGGTTTACGCGTAGGATATGGTTTAATTTGGCTCTTCTCTAAACAATTCATTGTACTCCGGAATGGAATTCGGTAATATGGAAACTGAATCGTGTATTAGAGTTTGATTTATTTGTATATGTGAAGCTTATTGAAGCAAGGTTCTATTGAGTCAAAAACTATAGATACCGGTACATTTATTGGCTTATGGATCTTTTTGACTTTAGTTCTCTATACTATAAAGAATTGATTCTATGAATTTTCACGTTTTAAATCATAGTTGTTTTTTAATTGAGCTAGACTCAGAACAGTATAACCGCTTAAGATTTGAGTAGTCAACACTTTCAATTCACTTGGACTTGGGAAATTTCTATATCCCGTTACCATATGTGGTTCTTGTTTTATTAATTATTCTAGTGTCTGTAATATGTGTGTTGTCACTGTTTTTATTACTTATTTGATTAATAACTCAGTAAGTCAGTGCTAGAAGTTATTTTCACACTTCCTGAGCTAAACAGTTCAGTTATGACCACCTAAAGGCCATAAAGTGCTTGACTGGGAAAATAGTATAACGAACGATTTTTAACTATCCCATTGGATGTTATTGATAATTTTCTGCACATTTTTCATGTAAATTGATTTAGATGTTATTGTTGTGAAATAGGCACTGCCTATTTCACCATAGTAGCGCCATCTTTAACTAAATGTGAAAACTAGATTTGGGGAAAATAAGTGTAATGACTTGATTAAGGTGAAAATTGAACTTAATCAGAGATATGTCTTCTTAGGTTCTTGGACACACATTGGTGGATGGAACTCCCTTGTTCTTGATTTTGGAATGCTATAGTGTAAATCTTGGGAGTTTATCTCTTAATTTCAGGAATTTTATGATATTTCAATTTCCAGGTAGCTTTCTACTGGGCAGCAAATATTTTATTCTCGTGTGGGGAGGTCATCCATTTAAAAGAACGACCGACTATCAAGGTCACTTCAAGGGTAGATGGGGTTTTTAATGCAATGTTGAGATTGTATTTCTTGTGTTGTTTCTTCTAGGAATAGTTTTGATTGGGTCGTGCTAATTGGAGACTGTTTTTGCATCCGTCATTGGCTATCGTGGGGGATGGAGTCTTTTCTTTCTCTTCTCTTCTGTTTTCCTTCTTCCTTGATAAAATTTTTAGTTTTGTGAGATTGTAGGATTATTGCTATGTATCATTTATTATGTCACGGGAGTCCTTACCTACAACTTTTTACGTTGCTTCAGTTTATCATTTGTCTAGGTTGCTTTCAGGACAAAGGTTTTTCACCCAAACATTAACATTAACGGTAGTATTTGCTTGGACATCTTGAAAGAGCAATGGAGTCCAGCTTTGACTATATCAAGGGTTTTGACTTCTCAATGACAATTTTAACATTAAACTCCTAGATGTTTGAATTTTATTATCTTGTGCCTTTTTTACACTATGGCTTTGGATCAAATTCTTTGAGTTGCCTGTTGATCAACATTTACAATTTTATTGCTTAACTAGGGTATCAAGGCACTATGATTATATGCATATATTAAAGAGGGGGAAAAAAAAACCCCCCCCATTTTGTTGATATAATTTCGTTCATGGTACTCGGGCATATTGATGTAGTAATGTGATGGCAATTGTACTTTAGTGCTCAACACTCTGAACAGTTGTCACATTTCATGTCATCTTTATTTTATTACAATATTTCTCTAATTATAGGAATAGTCATCAATCCAAATTATAGTGAAGCCATCAGGACATAAAAAAATTTAAATCCAAGAACGTGTTAGGTGAAAACACTGCTAAGCAAACAACTTAGACCAATCGCTGAGAAAGTATGATTGCAACCATATATGGAGCATATAAAATGCACACATGTTGCTCTTGGGTGACAGCATGATATCCTGGTTAGATTTCATTTTTATGAAATTTATACTGTAAACTTGTGAGGGTTACTTATCATTTGAGTAGTGCAATGGGTACCAAGGGGTCACTGGCCAATGTTGACACAGGGAGACCATGGTATGTTTTCTGAGAAAGTCTATTGCCTTCCGTCAAAAATCCTGTTCATTTTCTTATGATATATATGGTGTAATGCATCTTATTCTAGAATATTGAATCGTTGTCTGCTCTTCAGCATCTTTGGCTAACATTATTGAGAATACATAGTGATTGTCAATCATTTTCTGCATATCCATTTCACTTTTTTCCTAGCTTCGATTAATTATACAGTTTTTCAATGGTTGGGAAGGGTTTCTGTTTCATATTCTGGTGTTACTTTCTATTTGCTCCCTTTCGACAGATGCCAACCCAGATGATCTACTAGTGCCAGAAATTTCTCATTTATACAAGACCGATAGGGCCAAGTATGAGACAACTACAAGGAGCTGGACTAAAAAAATATGCGATGGGCTCGTTTGTATTATGGGAAGGGTATGAGGGATGTCACTGTTGGTTCTCATGTATAAATATAATTTTCTGTACTATATACTATTAGGAGTGATTGAAATAATTCTATGTCGTTCAATTTAAAATCAACATGATGCGTTAAGTTCATGTTCGACTAATATATATCAATTATATGGATTTGATTTCGTACAGCTCCATGACCTGTGAATCTTAATCCTAGATTTCAAGCCAGTGAAGAAACTATCTCGCATCATGGCTTCTTATGGATGATGGAGGATAAAGGCGGAAAATGGGCTAGAGCGCCGAGCTGCTCCAATTGCATTTCCACCCCCACTTGAATTCTGAGGGTATGTGATCTTTTCCATCGTCTAAAGCTTGTCCATTCATTGTGTCAACTGCCTTTCATTTTTTGCTTGGATCTAGACATTTTTCTTTAGAAATTGAGAAACTATTTGTACTATTTTTGCTGCAAACGAAGAGGATAATACTAGTGGGGTGGGCTGGAGGGCAGGGATCTACATAACCAAGACCTTAGTCAACAATAAAACACTAGAAAAGCCTCACTGAAAAGCAGACAGTACTTGGATCTAGATTTTTATGGTAATGAAAACCCATATGTTCTTGGATATAAGACTTCTTTTTTTGCACAGAACTTCGATCTAGATTTAAGTTGAGCTTAATATAGCTCCAGATAATAGTAGTTTTAACCACAACTCGGTTGACTAATAAAAAATCGAAGGGAGTTTCTATTGTTCCAAAATTCTTGTGATGTTTATCCTCGGTCATTTCGGTTAGAAATCACGACTCTCTACAATGGTATGATATTATCCACTTTGAGCATAAACTCTCGTGGCTTTGCTTTGGGTTTCCTCAAAAGGCCTCAAACCAATAGAGATAGTATTCCTCACTTATAAACCCATGATATTCCACTAAATTAACTAATGTGGTACTCACTGTCAATAATCCTCAACGGTCCTCCCCTTGAACAAAGTATACTGTAAGCTCTCGAGGCTTATGGAGCTCTCGAATAGCCTCCCCTTAATCGAGACTCGACTCCTTTCTCTGGAGCCCTCGAACAAAGTACACTGTTTGTTCGATACTTTAGTCACTTTTGACTACATCTTCGAGGCTCACAATTCTTTGTTCGATATTTGAGGATTCTATTGACATGGCTAAGTTTAGGGCATGGCTCTGATATCATGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTAAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCTCAAAAGGCTTCCTACCAATGGAGATAGGATTCCTCACTTATAAACTCATGATCTTCCCCTAAATTAACTGACGTGGGACTCACTCCCAATAATCCTCAATCTTCAACCGTTTTAACCACAACTCGGTTGACTAATAAAAAATCGAAGGGAGTTTCAATTGTTCCAAAATTCTTGTGATGCTTATCCTCAGCCAATTCAAATGGAAATCAAAACCGAAAGAAAACGTCTCGACATTGTGTTGTGGTAGTGGACAAATTTGGATGAAATGTCTGCTTCTTCCACCTACCATTCCCAAGTCAATTTATTATTATCTCTCTCTCTCTCTCTATCAATAGAAATAGATTAAGGGCTGCAATTTGGTTGACAAAGAAAGTTGGACAATTCCTACATCCCACTCCCAATAAGAATGAAATTATTAAATGTTGTGTTGTCCTTTGGTATGCTCAAGTTGGTTTTGCCATCTCTTCCAACTTATCTTCGAACGTAGGTGGACATGAACTTCACCTCAGATTTCCCTTTCGGACAATAATTGTCCGAAACTATTCATCTACTTAAAAACTTCAATTCTAAGGCACATAATATCCATCACCCTGCCAATTCTGCCAACAACAGGTTATTACGTGCTCTGTTTGTTTGGTTTAAGTTCCCAATAATTAAATTTTGGACCATTACCCAACAGGGGTGAGGACGTTGGATTATTCCCTCCAAACTAGCATAGGGTCGATTAGTAGTTAAATCACTAATCAATCATTATTATAAATTTAATCATATCAACATTTTAATCGTTAAAAGTATGTTATCCATCTAGAGAGTATAAGGTCAAATTCTCCCACCCAAAATACTAGAACAAAGTATAATTGTCCTAACTTCGAGATAAAAGAAGTCAAGAGCCTAATCATTTGATTTTTTTTTTTTTTTTCATAGAAGGCCTAA

mRNA sequence

ATGGCGTCGAAACGGATCCTGAAGGAGATCAATGATCTCCAGAAAGATCCTTCTACTTCCTGCAGTGGTGGTTTAGTAGCTTTCTACTGGGCAGCAAATATTTTATTCTCGTGTGGGGAGGTCATCCATTTAAAAGAACGACCGACTATCAAGGTCACTTCAAGGGTAGATGGGTTTTTCAATGGTTGGGAAGGGTTTCTGTTTCATATTCTGGTGTTACTTTCTATTTGCTCCCTTTCGACAGATGCCAACCCAGATGATCTACTAGTGCCAGAAATTTCTCATTTATACAAGACCGATAGGGCCAAGTATGAGACAACTACAAGGAGCTGGACTAAAAAAATATGCGATGGGCTCGTTTGTATTATGGGAAGGAAGGCCTAA

Coding sequence (CDS)

ATGGCGTCGAAACGGATCCTGAAGGAGATCAATGATCTCCAGAAAGATCCTTCTACTTCCTGCAGTGGTGGTTTAGTAGCTTTCTACTGGGCAGCAAATATTTTATTCTCGTGTGGGGAGGTCATCCATTTAAAAGAACGACCGACTATCAAGGTCACTTCAAGGGTAGATGGGTTTTTCAATGGTTGGGAAGGGTTTCTGTTTCATATTCTGGTGTTACTTTCTATTTGCTCCCTTTCGACAGATGCCAACCCAGATGATCTACTAGTGCCAGAAATTTCTCATTTATACAAGACCGATAGGGCCAAGTATGAGACAACTACAAGGAGCTGGACTAAAAAAATATGCGATGGGCTCGTTTGTATTATGGGAAGGAAGGCCTAA

Protein sequence

MASKRILKEINDLQKDPSTSCSGGLVAFYWAANILFSCGEVIHLKERPTIKVTSRVDGFFNGWEGFLFHILVLLSICSLSTDANPDDLLVPEISHLYKTDRAKYETTTRSWTKKICDGLVCIMGRKA
Homology
[Close]
BLAST of Carg20871 vs. NCBI nr
Match: XP_022147329.1 (ubiquitin-conjugating enzyme E2-17 kDa-like isoform X2 [Momordica charantia])

HSP 1 Score: 131.0 bits (328), Expect = 2.9e-27
Identity = 81/165 (49.09%), Postives = 93/165 (56.36%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCG------------ 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      ++ G            
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  -----------EVIH-------------LKER--PTIKVTSRVDGFFNGWEGFLFHILVL 119
                      +V H             LKE+  P + ++        GWEGFLFHI VL
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISK-----VCGWEGFLFHIQVL 120

[Close]
BLAST of Carg20871 vs. NCBI nr
Match: PPR93664.1 (hypothetical protein GOBAR_AA27008 [Gossypium barbadense])

HSP 1 Score: 122.5 bits (306), Expect = 1.0e-24
Identity = 71/132 (53.79%), Postives = 80/132 (60.61%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANILFS-----CGEVIHLKER----- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+        G V  +  R     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVAFRTKVFH 60

Query: 61  PTIKVTSRV--DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLVPEISHLYKTDRAKYE 118
           P I     +  D     W   L    VLLSICSL TD NPDD LVPEI+H+YKTDRAKYE
Sbjct: 61  PNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 120

[Close]
BLAST of Carg20871 vs. NCBI nr
Match: KHG30069.1 (Ubiquitin-conjugating enzyme E2-17 kDa [Gossypium arboreum])

HSP 1 Score: 121.7 bits (304), Expect = 1.8e-24
Identity = 70/130 (53.85%), Postives = 79/130 (60.77%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCGEVIHLKE-RPTI 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      ++ G     K   P I
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVAFRTKVFHPNI 60

Query: 61  KVTSRV--DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLVPEISHLYKTDRAKYETTT 119
                +  D     W   L    VLLSICSL TD NPDD LVPEI+H+YKTDRAKYETT 
Sbjct: 61  NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTA 120

[Close]
BLAST of Carg20871 vs. NCBI nr
Match: XP_023538854.1 (ubiquitin-conjugating enzyme E2-17 kDa-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.9 bits (302), Expect = 3.1e-24
Identity = 68/125 (54.40%), Postives = 72/125 (57.60%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVAFYWAANILFSCGEVIHLKERPTIKVTSRVDGFF 60
           MASKRILKE+NDLQKDPSTSCSG      W ++                           
Sbjct: 1   MASKRILKELNDLQKDPSTSCSG----VQWVSS--------------------------- 60

Query: 61  NGWEGFLFHILVLLSICSLSTDANPDDLLVPEISHLYKTDRAKYETTTRSWTKKICDGLV 120
             W            +     DANPDDLLVPEISHLYKTDRAKYETTTRSWTKKICDGLV
Sbjct: 61  GRWP----------MLTQGDHDANPDDLLVPEISHLYKTDRAKYETTTRSWTKKICDGLV 84

Query: 121 CIMGR 126
           CIMGR
Sbjct: 121 CIMGR 84

[Close]
BLAST of Carg20871 vs. NCBI nr
Match: XP_022979385.1 (ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita maxima])

HSP 1 Score: 118.6 bits (296), Expect = 1.5e-23
Identity = 73/148 (49.32%), Postives = 85/148 (57.43%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCGE---VIHLK--- 60
           MASKRILKE+ND+QKDP TSCS G VA   F+W A I+      ++ G     IH     
Sbjct: 1   MASKRILKELNDIQKDPPTSCSAGPVAEDLFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TDANPDD LV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120

[Close]
BLAST of Carg20871 vs. TAIR10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9)

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 68/148 (45.95%), Postives = 82/148 (55.41%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCG---EVIHLK--- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      +S G     IH     
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TD NPDD LV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

[Close]
BLAST of Carg20871 vs. TAIR10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10)

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 68/148 (45.95%), Postives = 82/148 (55.41%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCG---EVIHLK--- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      ++ G     IH     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TD NPDD LV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of Carg20871 vs. TAIR10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11)

HSP 1 Score: 109.0 bits (271), Expect = 2.2e-24
Identity = 67/148 (45.27%), Postives = 83/148 (56.08%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCGEV---IHLK--- 60
           MASKRILKE+ DLQKDP ++CS G VA   F+W A I+      ++ G     IH     
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TD NPDD LV
Sbjct: 61  PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of Carg20871 vs. TAIR10
Match: AT5G41700.4 (ubiquitin conjugating enzyme 8)

HSP 1 Score: 105.5 bits (262), Expect = 2.4e-23
Identity = 69/149 (46.31%), Postives = 81/149 (54.36%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSC-SGGLVA---FYWAANIL------FSCG---EVIHLK-- 60
           MASKRILKE+ DLQKDP TSC   G VA   F+W A I+      +S G     IH    
Sbjct: 1   MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60

Query: 61  ---ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLL 119
              + P +   ++V             D     W   L    VLLSICSL TD NPDD L
Sbjct: 61  YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120

[Close]
BLAST of Carg20871 vs. TAIR10
Match: AT5G56150.1 (ubiquitin-conjugating enzyme 30)

HSP 1 Score: 100.9 bits (250), Expect = 5.9e-22
Identity = 64/148 (43.24%), Postives = 77/148 (52.03%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCG---EVIHLK--- 60
           MASKRI KE+ DLQ+DP  SCS G      F W A I+      F+ G     IH     
Sbjct: 1   MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TD NPDD LV
Sbjct: 61  PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of Carg20871 vs. Swiss-Prot
Match: sp|Q94F47|UBC28_ARATH (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24
Identity = 71/148 (47.97%), Postives = 83/148 (56.08%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCG---EVIHLK--- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      +S G     IH     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TD NPDD LV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of Carg20871 vs. Swiss-Prot
Match: sp|P35135|UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24
Identity = 71/148 (47.97%), Postives = 83/148 (56.08%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCGEV---IHLK--- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      ++ G     IH     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TD NPDD LV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of Carg20871 vs. Swiss-Prot
Match: sp|Q8S919|UBC5B_ORYSJ (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5B PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-24
Identity = 69/148 (46.62%), Postives = 84/148 (56.76%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCG---EVIHLK--- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A ++      ++ G     IH     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P + + ++V             D     W   L    VLLSICSL TD NPDD LV
Sbjct: 61  PFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of Carg20871 vs. Swiss-Prot
Match: sp|P35131|UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.6e-24
Identity = 70/148 (47.30%), Postives = 82/148 (55.41%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCG---EVIHLK--- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      +S G     IH     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TD NPDD LV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of Carg20871 vs. Swiss-Prot
Match: sp|P35133|UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-23
Identity = 68/148 (45.95%), Postives = 82/148 (55.41%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCG---EVIHLK--- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      ++ G     IH     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TD NPDD LV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

[Close]
BLAST of Carg20871 vs. TrEMBL
Match: tr|A0A2P5WRD2|A0A2P5WRD2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA27008 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.9e-25
Identity = 71/132 (53.79%), Postives = 80/132 (60.61%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANILFS-----CGEVIHLKER----- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+        G V  +  R     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVAFRTKVFH 60

Query: 61  PTIKVTSRV--DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLVPEISHLYKTDRAKYE 118
           P I     +  D     W   L    VLLSICSL TD NPDD LVPEI+H+YKTDRAKYE
Sbjct: 61  PNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 120

[Close]
BLAST of Carg20871 vs. TrEMBL
Match: tr|A0A0B0PZW6|A0A0B0PZW6_GOSAR (Ubiquitin-conjugating enzyme E2-17 kDa OS=Gossypium arboreum OX=29729 GN=F383_11431 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 70/130 (53.85%), Postives = 79/130 (60.77%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCGEVIHLKE-RPTI 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      ++ G     K   P I
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVAFRTKVFHPNI 60

Query: 61  KVTSRV--DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLVPEISHLYKTDRAKYETTT 119
                +  D     W   L    VLLSICSL TD NPDD LVPEI+H+YKTDRAKYETT 
Sbjct: 61  NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTA 120

[Close]
BLAST of Carg20871 vs. TrEMBL
Match: tr|A0A2P5RLQ8|A0A2P5RLQ8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA40419 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 70/129 (54.26%), Postives = 78/129 (60.47%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANILFS-----CGEVIHLKER----- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+        G V  +  R     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVAFRTKVFH 60

Query: 61  PTIKVTSRV--DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLVPEISHLYKTDRAKYE 115
           P I     +  D     W   L    VLLSICSL TD NPDD LVPEI+H+YKTDRAKYE
Sbjct: 61  PNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 120

[Close]
BLAST of Carg20871 vs. TrEMBL
Match: tr|A0A1S3AVT6|A0A1S3AVT6_CUCME (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucumis melo OX=3656 GN=LOC103483220 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-23
Identity = 73/148 (49.32%), Postives = 84/148 (56.76%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCGE---VIHLK--- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      ++ G     IH     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TDANPDD LV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120

[Close]
BLAST of Carg20871 vs. TrEMBL
Match: tr|E5GCG7|E5GCG7_CUCME (Ubiquitin conjugating enzyme OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-23
Identity = 73/148 (49.32%), Postives = 84/148 (56.76%), Query Frame = 0 

Query: 1   MASKRILKEINDLQKDPSTSCSGGLVA---FYWAANIL------FSCGE---VIHLK--- 60
           MASKRILKE+ DLQKDP TSCS G VA   F+W A I+      ++ G     IH     
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLITIHFPPDY 60

Query: 61  --ERPTIKVTSRV-------------DGFFNGWEGFLFHILVLLSICSLSTDANPDDLLV 119
             + P +   ++V             D     W   L    VLLSICSL TDANPDD LV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDANPDDPLV 120

The following BLAST results are available for this feature:
BLAST of Carg20871 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022147329.12.9e-2749.09ubiquitin-conjugating enzyme E2-17 kDa-like isoform X2 [Momordica charantia][more]
PPR93664.11.0e-2453.79hypothetical protein GOBAR_AA27008 [Gossypium barbadense][more]
KHG30069.11.8e-2453.85Ubiquitin-conjugating enzyme E2-17 kDa [Gossypium arboreum][more]
XP_023538854.13.1e-2454.40ubiquitin-conjugating enzyme E2-17 kDa-like isoform X2 [Cucurbita pepo subsp. pe... [more]
XP_022979385.11.5e-2349.32ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita maxima][more]
BLAST of Carg20871 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27960.21.7e-2445.95ubiquitin conjugating enzyme 9[more]
AT5G53300.11.7e-2445.95ubiquitin-conjugating enzyme 10[more]
AT3G08690.12.2e-2445.27ubiquitin-conjugating enzyme 11[more]
AT5G41700.42.4e-2346.31ubiquitin conjugating enzyme 8[more]
AT5G56150.15.9e-2243.24ubiquitin-conjugating enzyme 30[more]
BLAST of Carg20871 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94F47|UBC28_ARATH1.2e-2447.97Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1... [more]
sp|P35135|UBC4_SOLLC1.2e-2447.97Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
sp|Q8S919|UBC5B_ORYSJ2.7e-2446.62Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica OX=39947 GN=U... [more]
sp|P35131|UBC8_ARATH3.6e-2447.30Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S... [more]
sp|P35133|UBC10_ARATH3.0e-2345.95Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1... [more]
BLAST of Carg20871 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P5WRD2|A0A2P5WRD2_GOSBA6.9e-2553.79Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA27008 PE=3 SV... [more]
tr|A0A0B0PZW6|A0A0B0PZW6_GOSAR1.2e-2453.85Ubiquitin-conjugating enzyme E2-17 kDa OS=Gossypium arboreum OX=29729 GN=F383_11... [more]
tr|A0A2P5RLQ8|A0A2P5RLQ8_GOSBA1.7e-2354.26Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA40419 PE=3 SV... [more]
tr|A0A1S3AVT6|A0A1S3AVT6_CUCME2.9e-2349.32ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucumis melo OX=3656 GN=LOC103483... [more]
tr|E5GCG7|E5GCG7_CUCME2.9e-2349.32Ubiquitin conjugating enzyme OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20871-RACarg20871-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 38..120
e-value: 2.7E-10
score: 42.1
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILYSSF54495UBC-likecoord: 2..116
NoneNo IPR availablePANTHERPTHR24068:SF68SUBFAMILY NOT NAMEDcoord: 1..35
coord: 61..116
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 61..116
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 1..35