Carg20565 (gene) Silver-seed gourd

NameCarg20565
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionThioredoxin
LocationCucurbita_argyrosperma_scaffold_113 : 357342 .. 361035 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAAAACTTTGAAAGCCCTCGCAAATCAAACGGATATGGCTGATAAGAGAAAGAACTTGGAAGCGTAATTCGAGGCAATTCGACCTGGCTGGAGCAGTCACCAAACCATATCCATTGCGAAAACGAAGGATTTCCCTCCACTGCAACAGTTGAACCTCTCCCCCTTCGTCAATGGCGCTTTTACAGCCCCCCAAAACCCTTCAAATCACCGCCAATCTCTTCCCCATCTCTAATTTCATCTCCATTCGACCTTCCATTTCAATTCCTTTCTCCTCCTCCTCCAAAACCCTTCAACAAAATGCTCTTCTTTCATCATCCACCACCACTCCCAGAAGGATTCTGTGCAAACCCCCCAAGGGAAAGTACATCCACGACGATTATCTTGTGGTAAACTTGTGTTTTCTTTGATTTTGTTTGTGGGTTTGTTGCCAATTGTTTGCTTCTTTTCGCTATTGGTTCGGTTAATCATTTATGAGGTGCTTGTTTTGGTGTTGGGTTTGTAGAAGAAGATGACGGCTGAGGAAGTGCAGGAGCTGGTGAAGGGGAAAAGAAATGTGCCGCTTATAATCGATTTCTATGCTACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGGTATGTAGCAATTTGATATGAACTCACATTTATATGGCGTTTCTTTGCTGTACATGTGCCTAAATGCTTCATTTTCAAATATGGCGTTCAAAGAATGTATGTTATTATCCATTGGCTTAAGTTTTTAGTTTGTAGCAACATGGTATTAGATAGGAGTCCTTGTGCTAAAACCTCACTACTAAGTTGCTGTGTTCCATGCTAGTTTTCGAATCCATAAGTGAACCTTTCTGTAACCGCTGAAGCTCACTACAAGTAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGTTTCTCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTTCCCTCTTCAACCGATTTGGGGTCTCACAATCCACCCCCGTGAGGGCCAAGCGTCCTCGTTGGCACTCGTTCCCCTCTCCAATCGACGTGGGATCTCACACTATCAGTTTAAACCTTTTGGTTTAGTAGTGAGTTAGCTTCTGAATCCTGTTTGATTATTATTTCAAATATATTGTATGTTTAGATAGGCTAAAGGCTATTCCAGTTTAGTTTACATTTTCCCTCTTAGCTGGAACAACTGGGTAGTCAGTTTGGTTGGTAGTACCATGGTGATTTGGGCTATTCACATGGTGGGCACTGTAATATTGTGGTCTGTAACGGTGGTTTAGCTTGGCATCGCACATGATCGTCTCGTAATGGTGGTCTGACTGCAGTAGGAATAATCTGCGTGGCTCGATAAATCGATCCTCTTTGCATTCAATCAGTGTATCCCAAACTAGCAATTCTATCTTTTGTTAGTATATTCACTCCTATTCTGTTGTCCTACAGTCTATATGGGGGGTGGAAGAGACTCCTAGTCTATACGCCCATCGTTTTTTCTTTACTTCTAGTGCTCTATTGTGAGATCTCACATCAGTTGGAGAGGGGAACAAAGCATTCTTTATAAAGGTGTGGAAACCTCTCTCTAGTAGACACATTTTAAAACCGTGAAGCTGACGGTGATACGTAACGGGCCAAAGCTGACAATATCTACTAGTGGTGGGCTTGGGCTGTTACGTCTAGCCTCTATCTTAGGTGGAAAGTTCACTTTAGAATGATACACGTAATTGATTATCAAGCTTGTTTGTTGGAGAATCTAATCATTGTTTGTATTCTGAATGTCACAAAAACTTATGGTTTTAGTGGATGATTGAGCGTTGAGCGATATTTTTGTGCTCGTGATCACGTACAAAGCTTACGTTTCTGGGAATTTGTGTTATTTTTATTGAACAAATAATTTGTGGGAGCATGACTCACCATAAACAAGTCTATAGATTATAGTTCTTATCAACTTGCTTGAACAAAGTTGGTTGCATGGAGTTTTTGCACTTTCGTTTTGTGTATGCGCTGGAGTAAAGTTGTGGTTTGTTCAAGCAAAATGGTAGCTCAAAATGTTTGTTTCATCTATTGCTCGATAACAGCTCAAGCCCACCGCTAGAAAATATTGTCCGTTTTGGCCCGTTATGTATTGCTGTCAGCTCGATTTTAAAACATGGCTATTAGGGAGAGGTTTCCACACCCTTATAAGCATGCTTTGTTCCCCTCTCCAACTGATGTGGGATCTTACAATCCACTCTCCTTGGGGCCAGCATCCTCGCTGGCACACCGCTCGGTATCTGGCTCTGATACCATTTGTAACAGCCCAACTCCACAGCTGGCAAATATTGTCCACTTTGGCCCGTTACGTATCACCGTCAGTCTCATGGTTTTAAAATGCATCTGTTAGGAAGAGGTTTCCACACTCTTATGAGCAATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACACATTACAACCACATATCAGTAATATTTTCATGGTCATGTCGGTGATATTTTACAACATTTTTACTATTGATTTTCGTTCATGAAAGTTTTATATTTTCAAATCTCTTCGGCCTCGCACATCTGCCATAACTTCCCATTATTCCCCAGAGTGGGCTAGTTTTCAAATTTCACATTGCCTCATGGATCTGCTATGATTTGTAAATGTGTTGTTTGCTGAACGTGTCGATGCTCGAGACGATTGCTTGAGCTGATGGCATTATCTATTAACTTCGAACATAGATTAACATTTGGAGTTGTTGGATTAGGCTGTAACTAATACGTGCTTATTCAACTTCTATCTTGGAAATCTGGAAGCAATTGCTAACGTGTAGCTCTTACCACAGCTTGCGGTCGAGTACGAGAACAATGCAATGATCATCAAGGTTGATACAGATGACGAATATGAATTCTCGCGTGATATGCAGGTGAAACACATCAATCCTTTCTCCCTATCCTCTTTGCTTGGTCTCTATACGACAAAGCGTTCTTACACGAAACACTCTCATCTATATGATCTACAAACGCATCGATTATCAGCAAATCGAGTTGCGAAAGATATTGTCTTTGTTCGTTTGAAACGTAAATCTGAGTTGGATGTCTTGTTTCAGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCGAAAAAAGAAGCTATCCGCACCGAAGGTCTCATTCCGATTCAGATGATGCGAGATATCATCGATAAAGAGATGTGAGCTATGAAGAAAGGAACATCAGGAATACCCTCGTCGACACAGCGGGAAATTTGGAGATCGAACGTGTTCTTTCGAGTCGTGGATGGAGTTTTTTGGCCTCCAGTAAGTCATTTTTTAACCAGAGATTTGAATGGCGGAAAAGCTATTACTTTGCTCCCATCATTTTGTACTGAAAACATAATTTTCTTTTCTTTAGGAAGTGTTATCTTGTAGTAGCAACAGTTCAACTAACAGAATTTTAGTTGGTTTTAAAATTTTAATCATGGGTTGGTTTGGTTCGGTCCGTTTTCGGCTCTTTGGAAATCGATTCGAATGTATCTACTTATACCCTATTGTCAAATATGTGTTCTCGGGATCATGGGATGTCGGGATCTCGAGCTGAAATTTTAAGAGGGAATCTCGCCACGAGAGAGGGCAAGATAGAGTGTAATGAGGTCAGACGTAGCGTTTTCC

mRNA sequence

TGAAAAACTTTGAAAGCCCTCGCAAATCAAACGGATATGGCTGATAAGAGAAAGAACTTGGAAGCGTAATTCGAGGCAATTCGACCTGGCTGGAGCAGTCACCAAACCATATCCATTGCGAAAACGAAGGATTTCCCTCCACTGCAACAGTTGAACCTCTCCCCCTTCGTCAATGGCGCTTTTACAGCCCCCCAAAACCCTTCAAATCACCGCCAATCTCTTCCCCATCTCTAATTTCATCTCCATTCGACCTTCCATTTCAATTCCTTTCTCCTCCTCCTCCAAAACCCTTCAACAAAATGCTCTTCTTTCATCATCCACCACCACTCCCAGAAGGATTCTGTGCAAACCCCCCAAGGGAAAGTACATCCACGACGATTATCTTGTGAAGAAGATGACGGCTGAGGAAGTGCAGGAGCTGGTGAAGGGGAAAAGAAATGTGCCGCTTATAATCGATTTCTATGCTACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGCTCTTACCACAGCTTGCGGTCGAGTACGAGAACAATGCAATGATCATCAAGGTTGATACAGATGACGAATATGAATTCTCGCGTGATATGCAGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCGAAAAAAGAAGCTATCCGCACCGAAGGTCTCATTCCGATTCAGATGATGCGAGATATCATCGATAAAGAGATGTGAGCTATGAAGAAAGGAACATCAGGAATACCCTCGTCGACACAGCGGGAAATTTGGAGATCGAACGTGTTCTTTCGAGTCGTGGATGGAGTTTTTTGGCCTCCAGTAAGTCATTTTTTAACCAGAGATTTGAATGGCGGAAAAGCTATTACTTTGCTCCCATCATTTTGTACTGAAAACATAATTTTCTTTTCTTTAGGAAGTGTTATCTTGTAGTAGCAACAGTTCAACTAACAGAATTTTAGTTGGTTTTAAAATTTTAATCATGGGTTGGTTTGGTTCGGTCCGTTTTCGGCTCTTTGGAAATCGATTCGAATGTATCTACTTATACCCTATTGTCAAATATGTGTTCTCGGGATCATGGGATGTCGGGATCTCGAGCTGAAATTTTAAGAGGGAATCTCGCCACGAGAGAGGGCAAGATAGAGTGTAATGAGGTCAGACGTAGCGTTTTCC

Coding sequence (CDS)

ATGGCGCTTTTACAGCCCCCCAAAACCCTTCAAATCACCGCCAATCTCTTCCCCATCTCTAATTTCATCTCCATTCGACCTTCCATTTCAATTCCTTTCTCCTCCTCCTCCAAAACCCTTCAACAAAATGCTCTTCTTTCATCATCCACCACCACTCCCAGAAGGATTCTGTGCAAACCCCCCAAGGGAAAGTACATCCACGACGATTATCTTGTGAAGAAGATGACGGCTGAGGAAGTGCAGGAGCTGGTGAAGGGGAAAAGAAATGTGCCGCTTATAATCGATTTCTATGCTACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGCTCTTACCACAGCTTGCGGTCGAGTACGAGAACAATGCAATGATCATCAAGGTTGATACAGATGACGAATATGAATTCTCGCGTGATATGCAGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCGAAAAAAGAAGCTATCCGCACCGAAGGTCTCATTCCGATTCAGATGATGCGAGATATCATCGATAAAGAGATGTGA

Protein sequence

MALLQPPKTLQITANLFPISNFISIRPSISIPFSSSSKTLQQNALLSSSTTTPRRILCKPPKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLLPQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDKEM
BLAST of Carg20565 vs. NCBI nr
Match: XP_022951386.1 (thioredoxin-like protein CITRX, chloroplastic [Cucurbita moschata])

HSP 1 Score: 313.2 bits (801), Expect = 6.0e-82
Identity = 177/182 (97.25%), Postives = 177/182 (97.25%), Query Frame = 0

Query: 1   MALLQPPKTLQITANLFPISNFISIRPSISIPFSSSSKTXXXXXXXXXXXXXXXXILCKP 60
           MALLQPPKTLQITANLFPISNF SIRPSISIPFSSSSKTXXXXXXXXXXXXXXXXILCKP
Sbjct: 1   MALLQPPKTLQITANLFPISNFSSIRPSISIPFSSSSKTXXXXXXXXXXXXXXXXILCKP 60

Query: 61  PKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLLPQLAV 120
           PKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEM    LAV
Sbjct: 61  PKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEM----LAV 120

Query: 121 EYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDK 180
           EYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDK
Sbjct: 121 EYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDK 178

Query: 181 EM 183
           EM
Sbjct: 181 EM 178

BLAST of Carg20565 vs. NCBI nr
Match: XP_023538068.1 (thioredoxin-like protein CITRX, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 1.1e-80
Identity = 161/182 (88.46%), Postives = 161/182 (88.46%), Query Frame = 0

Query: 1   MALLQPPKTLQITANLFPISNFISIRPSISIPFSSSSKTXXXXXXXXXXXXXXXXILCKP 60
           MALLQPPKTLQITANLFPISNF SIRPSISIPFSSSSKT                ILCKP
Sbjct: 1   MALLQPPKTLQITANLFPISNFSSIRPSISIPFSSSSKT-HQQNALLSSSTTPRRILCKP 60

Query: 61  PKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLLPQLAV 120
           PKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEM    LAV
Sbjct: 61  PKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEM----LAV 120

Query: 121 EYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDK 180
           EYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDK
Sbjct: 121 EYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDK 177

Query: 181 EM 183
           EM
Sbjct: 181 EM 177

BLAST of Carg20565 vs. NCBI nr
Match: XP_023002069.1 (thioredoxin-like protein CITRX, chloroplastic [Cucurbita maxima])

HSP 1 Score: 302.8 bits (774), Expect = 8.1e-79
Identity = 159/188 (84.57%), Postives = 159/188 (84.57%), Query Frame = 0

Query: 1   MALLQPPKTLQITANLFPISNFISIRPSISIPFSSSSKT------XXXXXXXXXXXXXXX 60
           MALLQPPKTLQITANLFPISNF S RPSISIPFSSSSKT                     
Sbjct: 1   MALLQPPKTLQITANLFPISNFSSTRPSISIPFSSSSKTHQQNALLSSSTTPFSLSTTPR 60

Query: 61  XILCKPPKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEML 120
            ILCKPPKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEM 
Sbjct: 61  RILCKPPKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEM- 120

Query: 121 LPQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMM 180
              LAVEYENNAMIIKVDTDDEYEFS DMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMM
Sbjct: 121 ---LAVEYENNAMIIKVDTDDEYEFSHDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMM 180

Query: 181 RDIIDKEM 183
           RDIIDKEM
Sbjct: 181 RDIIDKEM 184

BLAST of Carg20565 vs. NCBI nr
Match: XP_004146769.1 (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Cucumis sativus] >KGN47767.1 hypothetical protein Csa_6G401380 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 6.0e-74
Identity = 149/187 (79.68%), Postives = 155/187 (82.89%), Query Frame = 0

Query: 1   MALLQPPKTLQITANLFPISNFISIRPSISIPFSSS-----SKTXXXXXXXXXXXXXXXX 60
           MA+LQP KTLQ+T+NLFPI NF SIRPSISIPFSSS     S                  
Sbjct: 1   MAVLQPQKTLQVTSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSPTPRR 60

Query: 61  ILCKPPKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLL 120
           ILC+PPKGKYIHDDYLVKKMTA EVQELVKG+RNVPLIIDFYATWCGPCILMAQELEM  
Sbjct: 61  ILCEPPKGKYIHDDYLVKKMTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM-- 120

Query: 121 PQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMR 180
             LAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDP KEAIRTEGLIPIQMMR
Sbjct: 121 --LAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPNKEAIRTEGLIPIQMMR 180

Query: 181 DIIDKEM 183
           DIID+EM
Sbjct: 181 DIIDREM 183

BLAST of Carg20565 vs. NCBI nr
Match: XP_022131323.1 (thioredoxin-like protein CITRX, chloroplastic [Momordica charantia])

HSP 1 Score: 279.6 bits (714), Expect = 7.4e-72
Identity = 147/187 (78.61%), Postives = 152/187 (81.28%), Query Frame = 0

Query: 1   MALLQPPKTLQITANLFPISNFISIRPSISIPFSSS-----SKTXXXXXXXXXXXXXXXX 60
           MALLQP KTLQIT +LFPI NF + RPSISIPFSSS     +                  
Sbjct: 1   MALLQPHKTLQITNSLFPICNFSATRPSISIPFSSSKTHQQNPLFSSTITPFSLSTTPRK 60

Query: 61  ILCKPPKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLL 120
            LC+PPKGKYIHDDYLVKKMTA EVQELVKG+RNVPLIIDFYATWCGPCILMAQELEM  
Sbjct: 61  FLCQPPKGKYIHDDYLVKKMTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM-- 120

Query: 121 PQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMR 180
             LAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDP KEAIRTEGLIPIQMMR
Sbjct: 121 --LAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPSKEAIRTEGLIPIQMMR 180

Query: 181 DIIDKEM 183
           DIIDKEM
Sbjct: 181 DIIDKEM 183

BLAST of Carg20565 vs. TAIR10
Match: AT3G06730.1 (Thioredoxin z)

HSP 1 Score: 218.0 bits (554), Expect = 4.8e-57
Identity = 109/182 (59.89%), Postives = 136/182 (74.73%), Query Frame = 0

Query: 1   MALLQPPKTLQITANLFPISNFISIRPSISIPFSSSSKTXXXXXXXXXXXXXXXXILCKP 60
           ++ L  P +L I   + P++   S   + ++PFS  ++                 +LC P
Sbjct: 20  LSSLHAPSSLFIRREIRPVAAPFSSSTAGNLPFSPLTR--------------PRKLLCPP 79

Query: 61  PKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLLPQLAV 120
           P+GK++ +DYLVKK++A+E+QELVKG R VPLI+DFYATWCGPCILMAQELEM    LAV
Sbjct: 80  PRGKFVREDYLVKKLSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEM----LAV 139

Query: 121 EYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDK 180
           EYE+NA+I+KVDTDDEYEF+RDMQVRGLPTLFFISPDP K+AIRTEGLIP+QMM DIID 
Sbjct: 140 EYESNAIIVKVDTDDEYEFARDMQVRGLPTLFFISPDPSKDAIRTEGLIPLQMMHDIIDN 183

Query: 181 EM 183
           EM
Sbjct: 200 EM 183

BLAST of Carg20565 vs. TAIR10
Match: AT1G43560.1 (thioredoxin Y2)

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-09
Identity = 33/110 (30.00%), Postives = 57/110 (51.82%), Query Frame = 0

Query: 73  KKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLLPQLAVEYENNAMIIKVD 132
           KK T     +L++   + P+++DFYATWCGPC LM      +L +++   ++   ++K+D
Sbjct: 61  KKQTFNSFDDLLQNS-DKPVLVDFYATWCGPCQLMVP----ILNEVSETLKDIIAVVKID 120

Query: 133 TDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDKEM 183
           T+     +   Q+  LPT  FI     K   R EG +P   + + I+  +
Sbjct: 121 TEKYPSLANKYQIEALPT--FILFKDGKLWDRFEGALPANQLVERIENSL 163

BLAST of Carg20565 vs. TAIR10
Match: AT1G50320.1 (thioredoxin X)

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08
Identity = 28/89 (31.46%), Postives = 45/89 (50.56%), Query Frame = 0

Query: 91  PLIIDFYATWCGPCILMAQELEMLLPQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPT 150
           P++++F ATWCGPC L+   +E     L+ EY +   I+K+D D   +   + +V GLP 
Sbjct: 89  PVLVEFVATWCGPCKLIYPAME----ALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPH 148

Query: 151 LFFISPDPKKEAIRTEGLIPIQMMRDIID 180
                   +    R EG I    +++ ID
Sbjct: 149 FILFKDGKEVPGSRREGAITKAKLKEYID 173

BLAST of Carg20565 vs. TAIR10
Match: AT3G15360.1 (thioredoxin M-type 4)

HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07
Identity = 24/92 (26.09%), Postives = 50/92 (54.35%), Query Frame = 0

Query: 89  NVPLIIDFYATWCGPCILMAQELEMLLPQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGL 148
           +VP++++F+A WCGPC    + +  ++ QLA ++       K++TD+    +    +R +
Sbjct: 104 DVPVLVEFWAPWCGPC----RMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSV 163

Query: 149 PTLFFISPDPKKEAIRTEGLIPIQMMRDIIDK 181
           PT+       KK++I   G +P + +   I++
Sbjct: 164 PTVIIFKGGEKKDSI--IGAVPRETLEKTIER 189

BLAST of Carg20565 vs. TAIR10
Match: AT4G03520.1 (Thioredoxin superfamily protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07
Identity = 28/94 (29.79%), Postives = 45/94 (47.87%), Query Frame = 0

Query: 87  KRNVPLIIDFYATWCGPCILMAQELEMLLPQLAVEYENNAMIIKVDTDDEYEFSRDMQVR 146
           K   P+++DF+A WCGPC    + ++ L+  LA  Y       K++TD+         VR
Sbjct: 96  KATGPVVVDFWAPWCGPC----KMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVR 155

Query: 147 GLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDK 181
            +PT+       KK+ I   G +P   +   +DK
Sbjct: 156 SIPTIMIFVGGEKKDTI--IGAVPKTTLTSSLDK 183

BLAST of Carg20565 vs. Swiss-Prot
Match: sp|Q9M7X9|CITRX_ARATH (Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CITRX PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 8.6e-56
Identity = 109/182 (59.89%), Postives = 136/182 (74.73%), Query Frame = 0

Query: 1   MALLQPPKTLQITANLFPISNFISIRPSISIPFSSSSKTXXXXXXXXXXXXXXXXILCKP 60
           ++ L  P +L I   + P++   S   + ++PFS  ++                 +LC P
Sbjct: 20  LSSLHAPSSLFIRREIRPVAAPFSSSTAGNLPFSPLTR--------------PRKLLCPP 79

Query: 61  PKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLLPQLAV 120
           P+GK++ +DYLVKK++A+E+QELVKG R VPLI+DFYATWCGPCILMAQELEM    LAV
Sbjct: 80  PRGKFVREDYLVKKLSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEM----LAV 139

Query: 121 EYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDK 180
           EYE+NA+I+KVDTDDEYEF+RDMQVRGLPTLFFISPDP K+AIRTEGLIP+QMM DIID 
Sbjct: 140 EYESNAIIVKVDTDDEYEFARDMQVRGLPTLFFISPDPSKDAIRTEGLIPLQMMHDIIDN 183

Query: 181 EM 183
           EM
Sbjct: 200 EM 183

BLAST of Carg20565 vs. Swiss-Prot
Match: sp|Q9LKW0|CITRX_SOLLC (Thioredoxin-like protein CITRX, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CITRX PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.3e-55
Identity = 101/127 (79.53%), Postives = 117/127 (92.13%), Query Frame = 0

Query: 57  LCKPPK-GKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLL 116
           +CKPP  GKY+ +DYLVKK++A+E+QEL+KG+RNVPLIIDFYATWCGPCILMAQELEM  
Sbjct: 53  ICKPPAVGKYVREDYLVKKLSAKEIQELIKGERNVPLIIDFYATWCGPCILMAQELEM-- 112

Query: 117 PQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMR 176
             LAVEYENNA+I+KVDTDDEYEF+RDMQVRGLPTL+FISPD  K+AIRTEGLIPIQMMR
Sbjct: 113 --LAVEYENNALIVKVDTDDEYEFARDMQVRGLPTLYFISPDSSKDAIRTEGLIPIQMMR 172

Query: 177 DIIDKEM 183
           DIID ++
Sbjct: 173 DIIDNDL 175

BLAST of Carg20565 vs. Swiss-Prot
Match: sp|Q6JE37|CITX2_NICBE (Thioredoxin-like protein CITRX2, chloroplastic OS=Nicotiana benthamiana OX=4100 GN=CITRX2 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.2e-54
Identity = 99/129 (76.74%), Postives = 118/129 (91.47%), Query Frame = 0

Query: 57  LCKPP---KGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEM 116
           +CKPP    GKY+ +DYLVKK++A+++QEL+KG+RNVPLIIDFYATWCGPCILMAQELEM
Sbjct: 57  ICKPPDVATGKYVREDYLVKKVSAKDIQELIKGERNVPLIIDFYATWCGPCILMAQELEM 116

Query: 117 LLPQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQM 176
               LAVEYE+NA+I+KVDTDDEYEF+RDMQVRGLPTL+FISPDP K+AIRTEGLIPIQM
Sbjct: 117 ----LAVEYESNALIVKVDTDDEYEFARDMQVRGLPTLYFISPDPNKDAIRTEGLIPIQM 176

Query: 177 MRDIIDKEM 183
           MRDII+ ++
Sbjct: 177 MRDIINNDL 181

BLAST of Carg20565 vs. Swiss-Prot
Match: sp|Q6JE38|CITX1_NICBE (Thioredoxin-like protein CITRX1, chloroplastic OS=Nicotiana benthamiana OX=4100 GN=CITRX1 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-53
Identity = 98/129 (75.97%), Postives = 117/129 (90.70%), Query Frame = 0

Query: 57  LCKPP---KGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEM 116
           +CKPP    GKY+ +DYLVKK++A+++QEL+KG+RNVPLIIDFYATWCGPCILMAQELEM
Sbjct: 57  ICKPPAVATGKYVREDYLVKKVSAKDIQELIKGERNVPLIIDFYATWCGPCILMAQELEM 116

Query: 117 LLPQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQM 176
               LAVEYE+NA+I+KVD DDEYEF+RDMQVRGLPTL+FISPDP K+AIRTEGLIPIQM
Sbjct: 117 ----LAVEYESNALIVKVDADDEYEFARDMQVRGLPTLYFISPDPNKDAIRTEGLIPIQM 176

Query: 177 MRDIIDKEM 183
           MRDII+ ++
Sbjct: 177 MRDIINNDL 181

BLAST of Carg20565 vs. Swiss-Prot
Match: sp|M1A3D5|CITRX_SOLTU (Thioredoxin-like protein CITRX, chloroplastic OS=Solanum tuberosum OX=4113 GN=CITRX PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 8.9e-53
Identity = 98/127 (77.17%), Postives = 116/127 (91.34%), Query Frame = 0

Query: 57  LCKP-PKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLL 116
           +C+P   GKY+ +DYLVKK++A+E+QEL+KG+RNVPLIIDFYATWCGPCILMAQELEM  
Sbjct: 53  ICQPRAVGKYVREDYLVKKLSAKEIQELIKGERNVPLIIDFYATWCGPCILMAQELEM-- 112

Query: 117 PQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMR 176
             LAVEYENNA+I+KVDTDDEYEF+RDMQVRGLPTL+FISPD  K+AIRTEGLIPIQMMR
Sbjct: 113 --LAVEYENNALIVKVDTDDEYEFARDMQVRGLPTLYFISPDSSKDAIRTEGLIPIQMMR 172

Query: 177 DIIDKEM 183
           DII+ ++
Sbjct: 173 DIINNDL 175

BLAST of Carg20565 vs. TrEMBL
Match: tr|A0A0A0KH97|A0A0A0KH97_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401380 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 4.0e-74
Identity = 149/187 (79.68%), Postives = 155/187 (82.89%), Query Frame = 0

Query: 1   MALLQPPKTLQITANLFPISNFISIRPSISIPFSSS-----SKTXXXXXXXXXXXXXXXX 60
           MA+LQP KTLQ+T+NLFPI NF SIRPSISIPFSSS     S                  
Sbjct: 1   MAVLQPQKTLQVTSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSPTPRR 60

Query: 61  ILCKPPKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLL 120
           ILC+PPKGKYIHDDYLVKKMTA EVQELVKG+RNVPLIIDFYATWCGPCILMAQELEM  
Sbjct: 61  ILCEPPKGKYIHDDYLVKKMTAAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM-- 120

Query: 121 PQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMR 180
             LAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDP KEAIRTEGLIPIQMMR
Sbjct: 121 --LAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPNKEAIRTEGLIPIQMMR 180

Query: 181 DIIDKEM 183
           DIID+EM
Sbjct: 181 DIIDREM 183

BLAST of Carg20565 vs. TrEMBL
Match: tr|A0A1S3BCN5|A0A1S3BCN5_CUCME (thioredoxin-like protein CITRX, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488444 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.1e-68
Identity = 141/178 (79.21%), Postives = 145/178 (81.46%), Query Frame = 0

Query: 10  LQITANLFPISNFISIRPSISIPFSSS-----SKTXXXXXXXXXXXXXXXXILCKPPKGK 69
           LQI++NLFPI NF SIRPSISIPFSSS     S                  ILC+PPKGK
Sbjct: 4   LQISSNLFPICNFTSIRPSISIPFSSSKTHHQSPLLSSSSRPFSLSTTPRRILCEPPKGK 63

Query: 70  YIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLLPQLAVEYEN 129
           YIHDDYLVKKMTA EVQELVK +RNVPLIIDFYATWCGPCILMAQELEM    LAVEYEN
Sbjct: 64  YIHDDYLVKKMTAAEVQELVKRERNVPLIIDFYATWCGPCILMAQELEM----LAVEYEN 123

Query: 130 NAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIIDKEM 183
           NAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDP KEAIRTEGLIPIQMMRDIID EM
Sbjct: 124 NAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDNEM 177

BLAST of Carg20565 vs. TrEMBL
Match: tr|A0A0J8B4M5|A0A0J8B4M5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_015280 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 5.8e-57
Identity = 117/183 (63.93%), Postives = 138/183 (75.41%), Query Frame = 0

Query: 1   MALLQPPKTLQITA-NLFPISNFISIRPSISIPFSSSSKTXXXXXXXXXXXXXXXXILCK 60
           M +L PP+ +   A N F  S    +  S+S PF     T                +LCK
Sbjct: 1   MQILTPPRFISSAASNFFFNSPPFHLNSSLSFPFKPHQLT--TLNFPCSLNLPSKKLLCK 60

Query: 61  PPKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLLPQLA 120
           PP GK++ +DYLVKK++AEE+QELV+G+RNVPLIIDFYATWCGPCILMAQELEM    LA
Sbjct: 61  PPSGKHVREDYLVKKLSAEEIQELVRGERNVPLIIDFYATWCGPCILMAQELEM----LA 120

Query: 121 VEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMRDIID 180
           VEYENNAMI+KVDTD+EYEF+RDMQVRGLPTL+FISPDP K+AIRTEGLIPIQMMRDI+D
Sbjct: 121 VEYENNAMIVKVDTDEEYEFARDMQVRGLPTLYFISPDPNKDAIRTEGLIPIQMMRDILD 177

Query: 181 KEM 183
           K+M
Sbjct: 181 KQM 177

BLAST of Carg20565 vs. TrEMBL
Match: tr|A0A2I4GZV0|A0A2I4GZV0_9ROSI (thioredoxin-like protein CITRX, chloroplastic OS=Juglans regia OX=51240 GN=LOC109012307 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 9.9e-57
Identity = 108/127 (85.04%), Postives = 120/127 (94.49%), Query Frame = 0

Query: 56  ILCKPPKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLL 115
           +LC+PP+GKY+ +DYLVKK++AEEVQELVKG+R+VPLIIDFYATWCGPCILMAQELEM  
Sbjct: 66  LLCQPPRGKYVREDYLVKKLSAEEVQELVKGERSVPLIIDFYATWCGPCILMAQELEM-- 125

Query: 116 PQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMR 175
             LAVEYENNA+I+KVDTDDEYEFSRDMQVRGLPTLFFISPDP K+AIRTEGLIPIQMMR
Sbjct: 126 --LAVEYENNALIVKVDTDDEYEFSRDMQVRGLPTLFFISPDPSKDAIRTEGLIPIQMMR 185

Query: 176 DIIDKEM 183
           DIID EM
Sbjct: 186 DIIDNEM 188

BLAST of Carg20565 vs. TrEMBL
Match: tr|A0A151RTY8|A0A151RTY8_CAJCA (Thioredoxin OS=Cajanus cajan OX=3821 GN=KK1_032439 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.9e-56
Identity = 106/127 (83.46%), Postives = 119/127 (93.70%), Query Frame = 0

Query: 56  ILCKPPKGKYIHDDYLVKKMTAEEVQELVKGKRNVPLIIDFYATWCGPCILMAQELEMLL 115
           +LCKPP+GKY+ DDYLVKK++A+E+QELVKG+R VPLIIDFYATWCGPCILMAQELE   
Sbjct: 66  LLCKPPQGKYVRDDYLVKKLSAQEIQELVKGERKVPLIIDFYATWCGPCILMAQELE--- 125

Query: 116 PQLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPKKEAIRTEGLIPIQMMR 175
             LAVEYENNAMI+KVDTDDEYEF+RDMQVRGLPT+FFISPDP K+AIRTEGLIPIQMMR
Sbjct: 126 -TLAVEYENNAMIVKVDTDDEYEFARDMQVRGLPTVFFISPDPNKDAIRTEGLIPIQMMR 185

Query: 176 DIIDKEM 183
           DIIDK+M
Sbjct: 186 DIIDKDM 188

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022951386.16.0e-8297.25thioredoxin-like protein CITRX, chloroplastic [Cucurbita moschata][more]
XP_023538068.11.1e-8088.46thioredoxin-like protein CITRX, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_023002069.18.1e-7984.57thioredoxin-like protein CITRX, chloroplastic [Cucurbita maxima][more]
XP_004146769.16.0e-7479.68PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Cucumis sativus] >KGN4... [more]
XP_022131323.17.4e-7278.61thioredoxin-like protein CITRX, chloroplastic [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT3G06730.14.8e-5759.89Thioredoxin z[more]
AT1G43560.14.8e-0930.00thioredoxin Y2[more]
AT1G50320.11.8e-0831.46thioredoxin X[more]
AT3G15360.11.6e-0726.09thioredoxin M-type 4[more]
AT4G03520.11.6e-0729.79Thioredoxin superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9M7X9|CITRX_ARATH8.6e-5659.89Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9LKW0|CITRX_SOLLC7.3e-5579.53Thioredoxin-like protein CITRX, chloroplastic OS=Solanum lycopersicum OX=4081 GN... [more]
sp|Q6JE37|CITX2_NICBE6.2e-5476.74Thioredoxin-like protein CITRX2, chloroplastic OS=Nicotiana benthamiana OX=4100 ... [more]
sp|Q6JE38|CITX1_NICBE2.3e-5375.97Thioredoxin-like protein CITRX1, chloroplastic OS=Nicotiana benthamiana OX=4100 ... [more]
sp|M1A3D5|CITRX_SOLTU8.9e-5377.17Thioredoxin-like protein CITRX, chloroplastic OS=Solanum tuberosum OX=4113 GN=CI... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KH97|A0A0A0KH97_CUCSA4.0e-7479.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401380 PE=4 SV=1[more]
tr|A0A1S3BCN5|A0A1S3BCN5_CUCME1.1e-6879.21thioredoxin-like protein CITRX, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A0J8B4M5|A0A0J8B4M5_BETVU5.8e-5763.93Uncharacterized protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_015280 ... [more]
tr|A0A2I4GZV0|A0A2I4GZV0_9ROSI9.9e-5785.04thioredoxin-like protein CITRX, chloroplastic OS=Juglans regia OX=51240 GN=LOC10... [more]
tr|A0A151RTY8|A0A151RTY8_CAJCA2.9e-5683.46Thioredoxin OS=Cajanus cajan OX=3821 GN=KK1_032439 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR005746Thioredoxin
IPR013766Thioredoxin_domain
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20565-RACarg20565-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 100..109
score: 50.94
coord: 144..155
score: 36.06
coord: 92..100
score: 45.99
NoneNo IPR availableGENE3DG3DSA:3.40.30.10coord: 68..182
e-value: 4.9E-24
score: 86.3
NoneNo IPR availablePANTHERPTHR10438:SF276THIOREDOXIN-LIKE PROTEIN CITRX, CHLOROPLASTICcoord: 40..182
NoneNo IPR availableCDDcd02947TRX_familycoord: 78..179
e-value: 1.32721E-20
score: 81.4504
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 72..166
e-value: 7.9E-17
score: 61.0
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 46..182
score: 13.15
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 40..182
IPR036249Thioredoxin-like superfamilySUPERFAMILYSSF52833Thioredoxin-likecoord: 71..180