Carg20553 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20553
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	eukaryotic translation initiation factor 5-like
Location	Cucurbita_argyrosperma_scaffold_113 : 239563 .. 241770 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTGTAAGTTTCTTGCTGCGTTGTGTTCAGATCTGTGGATTTAGTTGCCTGTTTCTCGTTTGTTTTGGATGTTCTTTTTTATTTCATCTCTCGATGATCGTAATTGAAAATTATGATTGTCTCCGTAGATTGGATATTCATGTAAAGCTGATTGAATCTTCTCTGTGAATTCGATTTTATTATTCTCCATCTAGTATTTTCATGCGTTGAATCTCGTCAGTTGGATATTGGATGGATTGTCAAGTTTTAAGGTAGATTGACTTATATTTTGTGGCTGATTGTGTTATTTTTTGCATCTTCTAAAATCTAACTTTATTTAAAGCGAACTGCAATTTTGTTTATGTTTTCATTGCTGCATTTAAAGATTACTCCATTGAGACCAATAAATCTGCTGTTGTACGGTTCAGTTTTCTATACCAAAGGTAGAAATCAGCTGTTAAATGATATTTGTGCACTTTAACTTGCGCTTGAATGATGATGTTTTATGTTCACTGTCAACGTTTAAGTTCATGAGAATCGAGCATAATTATTTGTTCTTAATCCACAGGAAGTTGGCCTTCTGGTCTGCTGTTGTGTAGTTCAAAGTGGAGAGCGTTAAGTTTGAGACTCCTTTTATGTCTGAACGGGCCACTCTCTTTTTGTCATCGATTGGATTGCTTGGAGAGTATTGTCCTACGTCTAGGAAAAAGTACAGCTGCGCTGAGACTATTGGCTGCATGCATCTTGAGTTGCCTGGTGGTCATAGTAACAGCCCGCGGGTGGTAGCCTTGTCCAGCTGCTCAAAGAACAACAGGGCATCTTGAAGATACCACTGCTGATATCTATCTTTTCTAACCAGTACTGCCGTTTTTGTGTTTTAACATGGCGTTGCAGAATATTGGTGCCTCAAACCGTGACGATGCCTTCTATAGGTATAAGATGCCTAGGATGGTTACTAAAATTGAAGGTAGAGGTAATGGCATTAAGACCAATGTGGTTAACATGGTGGAAATTGCAAAAGCCTTGGGCAGGCCTGCTTCTTACACTACCAAGTACTTTGGATGTGAGCTTGGTGCACAATCCAAATTCGATGAGAAAACTGGGACTTCTCTTGTAAATGGTGCACACGATACAGCCAAGCTTGCTGGTCTGCTCGAAAACTTTATCAAGAAGTATGTTCAATGCTACGGATGTGGTAACCCCGAAACTGAGATTATCATCACGAAGACGCAGATGATCACTATGAAATGTGCTGCCTGTGGATTTATATCTGATGTTGACATGAGGGATAAAATCACAACATTTATTCTCAAGAATCCTCCTGAACAGAAGAAGGGATCAAAAGACAAGAAAGCTATGAGGCGGGCTGAGAAGGAAAGACTTAAGGAGGGCGAGGCTGCTGATGAGGAGCAGAAGAAACTAAAGAAGGATTCGGTGAAGAAGAAAAGCACGAGTGGTAATTCAAAGGAAACTGTTACTAAAGTGCCAAGCAAGAAGAAGAATAATGGCTCGGATGACGATCATTCCCCAGTTCCTATCCATGCTAGTGGTAAGGACGAAGTAGTTGATGATGATGATGACGATGACGATGTGCAGTGGCAAACGGACACATCTTTAGAGGCAGCTAAGCAGCGTATTCAGGAGCAGTTGAGTGCGGTCACTGCTGATATGGTCATGCTGTCTACCGAAGAAACTACGTCGTCTAAAAAGCCCTCTGAACATGAGAAGTCTTCGATCAACGGAAACAAGAACGGAAATGGAGTGTCTCCCCATGTTGCTCTTGTCAACGAGATCAAAGATTATTTGAAGAAAGGTTCCTCCGCTGCCAACCTCAAATCATTTTTGGAATCGCTTTCTGGAACTCCCCAGGAGATCGTGAATGCCTTAGTTGAGGCTCTTTTTGATGGCGTTGGAAAAGGCTTCTCAAAGGAGGTGATGAAGAAGAAGAACTTCTTGGCTGCAGCTGTTGCTCTGGAGGGATCACAGATAGCTCTATTGCGTGCCATTGAATCTTTCTGTCTCAACACGAGTTCGGAGGCTGCTAAGGAGGTTGCTCTGGTTCTGAAATCGCTATACGACAGCAACCTGATTGAGGAGGAATTTGTATTAGAGTGGTACCAGAGGGGCGTGGTTGGTGCTAACAAAAGTTCTCCAATCTGGAATCATGTAAAGCCGTTCATCGAATGGCTCCAGAACGCCGAGTCCGAGACCGAAGAAGAGTAA

mRNA sequence

ATGGGAATTTTCAAAGTGGAGAGCGTTAAGTTTGAGACTCCTTTTATGTCTGAACGGGCCACTCTCTTTTTGTCATCGATTGGATTGCTTGGAGAGTATTGTCCTACGTCTAGGAAAAAGTACAGCTGCGCTGAGACTATTGGCTGCATGCATCTTGAGTTGCCTGGTGGTCATAGTAACAGCCCGCGGAATATTGGTGCCTCAAACCGTGACGATGCCTTCTATAGGTATAAGATGCCTAGGATGGTTACTAAAATTGAAGGTAGAGGTAATGGCATTAAGACCAATGTGGTTAACATGGTGGAAATTGCAAAAGCCTTGGGCAGGCCTGCTTCTTACACTACCAAGTACTTTGGATGTGAGCTTGGTGCACAATCCAAATTCGATGAGAAAACTGGGACTTCTCTTGTAAATGGTGCACACGATACAGCCAAGCTTGCTGGTCTGCTCGAAAACTTTATCAAGAAGTATGTTCAATGCTACGGATGTGGTAACCCCGAAACTGAGATTATCATCACGAAGACGCAGATGATCACTATGAAATGTGCTGCCTGTGGATTTATATCTGATGTTGACATGAGGGATAAAATCACAACATTTATTCTCAAGAATCCTCCTGAACAGAAGAAGGGATCAAAAGACAAGAAAGCTATGAGGCGGGCTGAGAAGGAAAGACTTAAGGAGGGCGAGGCTGCTGATGAGGAGCAGAAGAAACTAAAGAAGGATTCGGTGAAGAAGAAAAGCACGAGTGGTAATTCAAAGGAAACTGTTACTAAAGTGCCAAGCAAGAAGAAGAATAATGGCTCGGATGACGATCATTCCCCAGTTCCTATCCATGCTAGTGGTAAGGACGAAGTAGTTGATGATGATGATGACGATGACGATGTGCAGTGGCAAACGGACACATCTTTAGAGGCAGCTAAGCAGCGTATTCAGGAGCAGTTGAGTGCGGTCACTGCTGATATGGTCATGCTGTCTACCGAAGAAACTACGTCGTCTAAAAAGCCCTCTGAACATGAGAAGTCTTCGATCAACGGAAACAAGAACGGAAATGGAGTGTCTCCCCATGTTGCTCTTGTCAACGAGATCAAAGATTATTTGAAGAAAGGTTCCTCCGCTGCCAACCTCAAATCATTTTTGGAATCGCTTTCTGGAACTCCCCAGGAGATCGTGAATGCCTTAGTTGAGGCTCTTTTTGATGGCGTTGGAAAAGGCTTCTCAAAGGAGGTGATGAAGAAGAAGAACTTCTTGGCTGCAGCTGTTGCTCTGGAGGGATCACAGATAGCTCTATTGCGTGCCATTGAATCTTTCTGTCTCAACACGAGTTCGGAGGCTGCTAAGGAGGTTGCTCTGGTTCTGAAATCGCTATACGACAGCAACCTGATTGAGGAGGAATTTGTATTAGAGTGGTACCAGAGGGGCGTGGTTGGTGCTAACAAAAGTTCTCCAATCTGGAATCATGTAAAGCCGTTCATCGAATGGCTCCAGAACGCCGAGTCCGAGACCGAAGAAGAGTAA

Coding sequence (CDS)

ATGGGAATTTTCAAAGTGGAGAGCGTTAAGTTTGAGACTCCTTTTATGTCTGAACGGGCCACTCTCTTTTTGTCATCGATTGGATTGCTTGGAGAGTATTGTCCTACGTCTAGGAAAAAGTACAGCTGCGCTGAGACTATTGGCTGCATGCATCTTGAGTTGCCTGGTGGTCATAGTAACAGCCCGCGGAATATTGGTGCCTCAAACCGTGACGATGCCTTCTATAGGTATAAGATGCCTAGGATGGTTACTAAAATTGAAGGTAGAGGTAATGGCATTAAGACCAATGTGGTTAACATGGTGGAAATTGCAAAAGCCTTGGGCAGGCCTGCTTCTTACACTACCAAGTACTTTGGATGTGAGCTTGGTGCACAATCCAAATTCGATGAGAAAACTGGGACTTCTCTTGTAAATGGTGCACACGATACAGCCAAGCTTGCTGGTCTGCTCGAAAACTTTATCAAGAAGTATGTTCAATGCTACGGATGTGGTAACCCCGAAACTGAGATTATCATCACGAAGACGCAGATGATCACTATGAAATGTGCTGCCTGTGGATTTATATCTGATGTTGACATGAGGGATAAAATCACAACATTTATTCTCAAGAATCCTCCTGAACAGAAGAAGGGATCAAAAGACAAGAAAGCTATGAGGCGGGCTGAGAAGGAAAGACTTAAGGAGGGCGAGGCTGCTGATGAGGAGCAGAAGAAACTAAAGAAGGATTCGGTGAAGAAGAAAAGCACGAGTGGTAATTCAAAGGAAACTGTTACTAAAGTGCCAAGCAAGAAGAAGAATAATGGCTCGGATGACGATCATTCCCCAGTTCCTATCCATGCTAGTGGTAAGGACGAAGTAGTTGATGATGATGATGACGATGACGATGTGCAGTGGCAAACGGACACATCTTTAGAGGCAGCTAAGCAGCGTATTCAGGAGCAGTTGAGTGCGGTCACTGCTGATATGGTCATGCTGTCTACCGAAGAAACTACGTCGTCTAAAAAGCCCTCTGAACATGAGAAGTCTTCGATCAACGGAAACAAGAACGGAAATGGAGTGTCTCCCCATGTTGCTCTTGTCAACGAGATCAAAGATTATTTGAAGAAAGGTTCCTCCGCTGCCAACCTCAAATCATTTTTGGAATCGCTTTCTGGAACTCCCCAGGAGATCGTGAATGCCTTAGTTGAGGCTCTTTTTGATGGCGTTGGAAAAGGCTTCTCAAAGGAGGTGATGAAGAAGAAGAACTTCTTGGCTGCAGCTGTTGCTCTGGAGGGATCACAGATAGCTCTATTGCGTGCCATTGAATCTTTCTGTCTCAACACGAGTTCGGAGGCTGCTAAGGAGGTTGCTCTGGTTCTGAAATCGCTATACGACAGCAACCTGATTGAGGAGGAATTTGTATTAGAGTGGTACCAGAGGGGCGTGGTTGGTGCTAACAAAAGTTCTCCAATCTGGAATCATGTAAAGCCGTTCATCGAATGGCTCCAGAACGCCGAGTCCGAGACCGAAGAAGAGTAA

Protein sequence

MGIFKVESVKFETPFMSERATLFLSSIGLLGEYCPTSRKKYSCAETIGCMHLELPGGHSNSPRNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKCAACGFISDVDMRDKITTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEEQKKLKKDSVKKKSTSGNSKETVTKVPSKKKNNGSDDDHSPVPIHASGKDEVVDDDDDDDDVQWQTDTSLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVNEIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKSSPIWNHVKPFIEWLQNAESETEEE

Homology

[Close]

BLAST of Carg20553 vs. NCBI nr
Match: XP_023536674.1 (probable eukaryotic translation initiation factor 5-1 [Cucurbita pepo subsp. pepo] >XP_023536675.1 probable eukaryotic translation initiation factor 5-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 642.9 bits (1657), Expect = 9.2e-181
Identity = 439/443 (99.10%), Postives = 441/443 (99.55%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL
Sbjct: 4   QNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC
Sbjct: 64  GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVNE 362
           SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVS HVALVNE
Sbjct: 244 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSTHVALVNE 303

Query: 363 IKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVA 422
           IKDYLKKGSSAANLKSFL SLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVA
Sbjct: 304 IKDYLKKGSSAANLKSFLGSLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVA 363

Query: 423 LEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKSS 482
           LEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQ+GVVGANKSS
Sbjct: 364 LEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQKGVVGANKSS 423

Query: 483 PIWNHVKPFIEWLQNAESETEEE 506
           PIWNHVKPFIEWLQNAESETEEE
Sbjct: 424 PIWNHVKPFIEWLQNAESETEEE 446

[Close]

BLAST of Carg20553 vs. NCBI nr
Match: XP_023001893.1 (probable eukaryotic translation initiation factor 5-1 [Cucurbita maxima] >XP_023001894.1 probable eukaryotic translation initiation factor 5-1 [Cucurbita maxima])

HSP 1 Score: 640.6 bits (1651), Expect = 4.6e-180
Identity = 436/443 (98.42%), Postives = 439/443 (99.10%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL
Sbjct: 4   QNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC
Sbjct: 64  GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QWQTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVNE 362
           SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVNE
Sbjct: 244 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVNE 303

Query: 363 IKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVA 422
           IKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVA
Sbjct: 304 IKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVA 363

Query: 423 LEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKSS 482
           LEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWY +GV GANKSS
Sbjct: 364 LEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYLKGVAGANKSS 423

Query: 483 PIWNHVKPFIEWLQNAESETEEE 506
           PIWNHVKPFIEWLQNAESE+E E
Sbjct: 424 PIWNHVKPFIEWLQNAESESETE 446

[Close]

BLAST of Carg20553 vs. NCBI nr
Match: XP_022951565.1 (probable eukaryotic translation initiation factor 5-1 [Cucurbita moschata] >XP_022951566.1 probable eukaryotic translation initiation factor 5-1 [Cucurbita moschata])

HSP 1 Score: 640.2 bits (1650), Expect = 6.0e-180
Identity = 436/443 (98.42%), Postives = 440/443 (99.32%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL
Sbjct: 4   QNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC
Sbjct: 64  GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACG+ISDVDMRDKITTFILKN  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGYISDVDMRDKITTFILKN--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVNE 362
           SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVNE
Sbjct: 244 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVNE 303

Query: 363 IKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVA 422
           IKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVA
Sbjct: 304 IKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVA 363

Query: 423 LEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKSS 482
           LEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKSS
Sbjct: 364 LEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKSS 423

Query: 483 PIWNHVKPFIEWLQNAESETEEE 506
           P+WNHVKPFIEWLQNAESE+E E
Sbjct: 424 PVWNHVKPFIEWLQNAESESETE 444

[Close]

BLAST of Carg20553 vs. NCBI nr
Match: XP_022131574.1 (eukaryotic translation initiation factor 5-like [Momordica charantia] >XP_022131575.1 eukaryotic translation initiation factor 5-like [Momordica charantia] >XP_022131576.1 eukaryotic translation initiation factor 5-like [Momordica charantia])

HSP 1 Score: 554.7 bits (1428), Expect = 3.3e-154
Identity = 395/445 (88.76%), Postives = 411/445 (92.36%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNRDDAFYRYKMP+MVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL
Sbjct: 4   QNIGASNRDDAFYRYKMPKMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC
Sbjct: 64  GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGFISDVDMRDK+TTFILKN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGFISDVDMRDKLTTFILKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLS-TEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVN 362
           SLEAAKQRIQEQLSAVTADMVMLS TEE  SSKK +E+EKS +NGNKNGNG+S H ALV+
Sbjct: 244 SLEAAKQRIQEQLSAVTADMVMLSTTEENKSSKKSTENEKSQVNGNKNGNGISAHGALVH 303

Query: 363 EIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKK-KNFLAAA 422
           EIKDYLKKGSSAA LKSFLESLSGT QE+VNALVE LFDGVGKGFSKEV+KK        
Sbjct: 304 EIKDYLKKGSSAAELKSFLESLSGTRQEVVNALVECLFDGVGKGFSKEVLKKXXXXXXXX 363

Query: 423 VALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANK 482
                 QI LLRAIES CLNT+ EA KEVALVLKSLYD +++EEEFVLEWYQ+G+ G NK
Sbjct: 364 XXXXXXQIILLRAIESLCLNTNPEAGKEVALVLKSLYDGDVLEEEFVLEWYQQGLAGENK 423

Query: 483 SSPIWNHVKPFIEWLQNAESETEEE 506
           SS IW HVKPFIEWLQNAESETEEE
Sbjct: 424 SSQIWKHVKPFIEWLQNAESETEEE 448

[Close]

BLAST of Carg20553 vs. NCBI nr
Match: XP_023546001.1 (eukaryotic translation initiation factor 5-like [Cucurbita pepo subsp. pepo] >XP_023546002.1 eukaryotic translation initiation factor 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546.6 bits (1407), Expect = 9.0e-152
Identity = 370/446 (82.96%), Postives = 389/446 (87.22%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMV+IAKALGRPA+YTTKYFGCEL
Sbjct: 4   QNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKALGRPAAYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTG +LVNGAH+TAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMI MKC
Sbjct: 64  GAQSKFDEKTGIALVNGAHETAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMINMKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGFISDVDMRDK+TTFILKN                      XXXXXXXXXXXXXXXX
Sbjct: 124 AACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLS-TEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVN 362
           SLEAAKQRIQEQLSAVTADMVMLS TEET SSKK  EHEKS +NG+KNGNGVS H ALV+
Sbjct: 244 SLEAAKQRIQEQLSAVTADMVMLSTTEETKSSKKSPEHEKSVVNGSKNGNGVSTHGALVH 303

Query: 363 EIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAV 422
           EIKDYLKK  SAA+LKSFLESL+GT QE  NALVEALF+GVGKGFSKEV+K         
Sbjct: 304 EIKDYLKKSPSAADLKSFLESLTGTHQETANALVEALFEGVGKGFSKEVVKXXXXXXXXX 363

Query: 423 AL--EGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGAN 482
               EGSQI LLR+IESFCLNTS EAAKE+ALVLKSLYD ++IEEE VLEWYQ+G+ GAN
Sbjct: 364 XXXEEGSQIVLLRSIESFCLNTSPEAAKEIALVLKSLYDGDVIEEEIVLEWYQQGLAGAN 423

Query: 483 KSSPIWNHVKPFIEWLQNAESETEEE 506
           K S IW HVKPFIEWLQNAESETEEE
Sbjct: 424 KGSQIWKHVKPFIEWLQNAESETEEE 449

[Close]

BLAST of Carg20553 vs. TAIR10
Match: AT1G77840.1 (Translation initiation factor IF2/IF5)

HSP 1 Score: 450.3 bits (1157), Expect = 1.6e-126
Identity = 274/448 (61.16%), Postives = 321/448 (71.65%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNR+DAFYRYKMP+MVTK EG+GNGIKTN++N VEIAKAL RP SYTTKYFGCEL
Sbjct: 4   QNIGASNRNDAFYRYKMPKMVTKTEGKGNGIKTNIINNVEIAKALARPPSYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTSLVNGAH+T+KLAGLLENFIKK+VQCYGCGNPETEIIITKTQM+ +KC
Sbjct: 64  GAQSKFDEKTGTSLVNGAHNTSKLAGLLENFIKKFVQCYGCGNPETEIIITKTQMVNLKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGFIS+VDMRDK+T FILKN                                      
Sbjct: 124 AACGFISEVDMRDKLTNFILKN-----------PPEQKKVSKDKKAMRKAEKERLKEGEL 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
               XXXXXXXXXXXXXXX                         XXXXXXXXX +WQTDT
Sbjct: 184 ADEEXXXXXXXXXXXXXXXDSKTSKNHSSDEDISPKHDENALEVXXXXXXXXXVEWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGN--KNGNGVSPHVALV 362
           S EAA++R+ EQLSA TA+MVMLS  E    K P    KS  NGN  K  N       LV
Sbjct: 244 SREAAEKRMMEQLSAKTAEMVMLSAMEVEEKKAP----KSKSNGNVVKTENPPPQEKNLV 303

Query: 363 NEIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAA 422
            ++K+YLKKGS  + LKSF+ SLS  PQ+I++AL  ALFDGVGKGF+KEV KKKN+LAAA
Sbjct: 304 QDMKEYLKKGSPISALKSFISSLSEPPQDIMDALFNALFDGVGKGFAKEVTKKKNYLAAA 363

Query: 423 VAL--EGSQIALLRAIESFC-LNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVG 482
             +  +GSQ+ LL +I +FC  N + EA KEVALVLK+LYD ++IEEE VL+WY++G+ G
Sbjct: 364 ATMQEDGSQMHLLNSIGTFCGKNGNEEALKEVALVLKALYDQDIIEEEVVLDWYEKGLTG 423

Query: 483 ANKSSPIWNHVKPFIEWLQNAESETEEE 506
           A+KSSP+W +VKPF+EWLQ+AESE+EEE
Sbjct: 424 ADKSSPVWKNVKPFVEWLQSAESESEEE 436

[Close]

BLAST of Carg20553 vs. TAIR10
Match: AT1G36730.1 (Translation initiation factor IF2/IF5)

HSP 1 Score: 420.2 bits (1079), Expect = 1.8e-117
Identity = 328/452 (72.57%), Postives = 370/452 (81.86%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNRDDAFYRYKMPRM+TKIEGRGNGIKTNVVNMVEIAKALGRPA+YTTKYFGCEL
Sbjct: 4   QNIGASNRDDAFYRYKMPRMMTKIEGRGNGIKTNVVNMVEIAKALGRPAAYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEK GTSLVNGAHDT+KLAGLLENFIKKYVQCYGCGNPETEI+ITKTQM+ +KC
Sbjct: 64  GAQSKFDEKNGTSLVNGAHDTSKLAGLLENFIKKYVQCYGCGNPETEILITKTQMLQLKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGF+SDVDMRDK+T+FILK         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGFLSDVDMRDKLTSFILK---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WQTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKP-SEHEKSSINGNKNGNGVSP---HVA 362
           S EAA++R++EQLSAVTA+MVMLST E    KKP +E +K+    ++NGN   P   H  
Sbjct: 244 SREAAEKRMKEQLSAVTAEMVMLSTVE---EKKPVAEVKKAPEQVHENGNSKIPENAHEK 303

Query: 363 LVNEIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVM-----KK 422
           LVNEIK+ L  GSS   LK+ L S S  PQE ++AL  ALF G GKGF+KEV+       
Sbjct: 304 LVNEIKELLSSGSSPTQLKTALASNSANPQEKMDALFSALFGGTGKGFAKEVIXXXXXXX 363

Query: 423 KNFLAAAVALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQR 482
                   A   +Q+ LL  IESFC+  S+EAAKEVALV+K LYD ++++E+ ++EWY +
Sbjct: 364 XXXXXXXXAGAPAQMGLLNGIESFCMKASAEAAKEVALVIKGLYDEDILDEDVIVEWYNK 423

Query: 483 GVVGANKSSPIWNHVKPFIEWLQNAESETEEE 506
           GV    KSSP+  +V PFIEWLQNAESE+EEE
Sbjct: 424 GV----KSSPVLKNVTPFIEWLQNAESESEEE 439

[Close]

BLAST of Carg20553 vs. TAIR10
Match: AT5G20920.1 (eukaryotic translation initiation factor 2 beta subunit)

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-07
Identity = 27/93 (29.03%), Postives = 45/93 (48.39%), Query Frame = 0


Query: 94  KTNVVNMVEIAKALGRPASYTTKYFGCELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENF 153
           KT  VN +++ K + R   +  +Y   ELG     D +    +V G        G+L  +
Sbjct: 157 KTVFVNFMDLCKTMHRQPDHVMQYLLAELGTSGSLDGQQ-RLVVKGRFAPKNFEGILRRY 216

Query: 154 IKKYVQCYGCGNPETEIIITKTQMITMKCAACG 187
           I  YV C GC +P+T I+  + ++  ++C  CG
Sbjct: 217 ITDYVICLGCKSPDT-ILSKENRLFFLRCEKCG 247

[Close]

BLAST of Carg20553 vs. TAIR10
Match: AT4G18300.1 (Trimeric LpxA-like enzyme)

HSP 1 Score: 43.5 bits (101), Expect = 4.5e-04
Identity = 28/97 (28.87%), Postives = 49/97 (50.52%), Query Frame = 0


Query: 410 VMKKKNFLAAAVALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLE 469
           + K K  L   +    +QI ++   E  C   S E +   A +L  LYD ++++E+ +L 
Sbjct: 614 ITKWKGVLGFYLKQTDAQIEVIMKFEEMC-QESEELSPLFAKLLPFLYDKDVVQEDAILR 673

Query: 470 WYQRGVVGANKSSPIW-NHVKPFIEWLQNAESETEEE 506
           W +    GA+    ++ N  + FI+WL+ A  E EE+
Sbjct: 674 WGEE-KAGADDCDKVYLNKCESFIKWLKEASEEEEED 708

[Close]

BLAST of Carg20553 vs. TAIR10
Match: AT1G36732.1 (conserved peptide upstream open reading frame 19)

HSP 1 Score: 43.1 bits (100), Expect = 5.8e-04
Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = 0


Query: 16 MSERATLFLSSIGLLGEYCPTSRKK 41
          MSE+A+LF SSI LLGEYCP SRKK
Sbjct: 1  MSEQASLFQSSIRLLGEYCPISRKK 25

[Close]

BLAST of Carg20553 vs. Swiss-Prot
Match: sp|Q9S825|IF5Z_ARATH (Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana OX=3702 GN=At1g77840 PE=1 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.9e-125
Identity = 274/448 (61.16%), Postives = 321/448 (71.65%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNR+DAFYRYKMP+MVTK EG+GNGIKTN++N VEIAKAL RP SYTTKYFGCEL
Sbjct: 4   QNIGASNRNDAFYRYKMPKMVTKTEGKGNGIKTNIINNVEIAKALARPPSYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTSLVNGAH+T+KLAGLLENFIKK+VQCYGCGNPETEIIITKTQM+ +KC
Sbjct: 64  GAQSKFDEKTGTSLVNGAHNTSKLAGLLENFIKKFVQCYGCGNPETEIIITKTQMVNLKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGFIS+VDMRDK+T FILKN                                      
Sbjct: 124 AACGFISEVDMRDKLTNFILKN-----------PPEQKKVSKDKKAMRKAEKERLKEGEL 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
               XXXXXXXXXXXXXXX                         XXXXXXXXX +WQTDT
Sbjct: 184 ADEEXXXXXXXXXXXXXXXDSKTSKNHSSDEDISPKHDENALEVXXXXXXXXXVEWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGN--KNGNGVSPHVALV 362
           S EAA++R+ EQLSA TA+MVMLS  E    K P    KS  NGN  K  N       LV
Sbjct: 244 SREAAEKRMMEQLSAKTAEMVMLSAMEVEEKKAP----KSKSNGNVVKTENPPPQEKNLV 303

Query: 363 NEIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAA 422
            ++K+YLKKGS  + LKSF+ SLS  PQ+I++AL  ALFDGVGKGF+KEV KKKN+LAAA
Sbjct: 304 QDMKEYLKKGSPISALKSFISSLSEPPQDIMDALFNALFDGVGKGFAKEVTKKKNYLAAA 363

Query: 423 VAL--EGSQIALLRAIESFC-LNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVG 482
             +  +GSQ+ LL +I +FC  N + EA KEVALVLK+LYD ++IEEE VL+WY++G+ G
Sbjct: 364 ATMQEDGSQMHLLNSIGTFCGKNGNEEALKEVALVLKALYDQDIIEEEVVLDWYEKGLTG 423

Query: 483 ANKSSPIWNHVKPFIEWLQNAESETEEE 506
           A+KSSP+W +VKPF+EWLQ+AESE+EEE
Sbjct: 424 ADKSSPVWKNVKPFVEWLQSAESESEEE 436

[Close]

BLAST of Carg20553 vs. Swiss-Prot
Match: sp|Q9C8F1|IF5Y_ARATH (Probable eukaryotic translation initiation factor 5-1 OS=Arabidopsis thaliana OX=3702 GN=At1g36730 PE=2 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 3.2e-116
Identity = 328/452 (72.57%), Postives = 370/452 (81.86%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNRDDAFYRYKMPRM+TKIEGRGNGIKTNVVNMVEIAKALGRPA+YTTKYFGCEL
Sbjct: 4   QNIGASNRDDAFYRYKMPRMMTKIEGRGNGIKTNVVNMVEIAKALGRPAAYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEK GTSLVNGAHDT+KLAGLLENFIKKYVQCYGCGNPETEI+ITKTQM+ +KC
Sbjct: 64  GAQSKFDEKNGTSLVNGAHDTSKLAGLLENFIKKYVQCYGCGNPETEILITKTQMLQLKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGF+SDVDMRDK+T+FILK         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGFLSDVDMRDKLTSFILK---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WQTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKP-SEHEKSSINGNKNGNGVSP---HVA 362
           S EAA++R++EQLSAVTA+MVMLST E    KKP +E +K+    ++NGN   P   H  
Sbjct: 244 SREAAEKRMKEQLSAVTAEMVMLSTVE---EKKPVAEVKKAPEQVHENGNSKIPENAHEK 303

Query: 363 LVNEIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVM-----KK 422
           LVNEIK+ L  GSS   LK+ L S S  PQE ++AL  ALF G GKGF+KEV+       
Sbjct: 304 LVNEIKELLSSGSSPTQLKTALASNSANPQEKMDALFSALFGGTGKGFAKEVIXXXXXXX 363

Query: 423 KNFLAAAVALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQR 482
                   A   +Q+ LL  IESFC+  S+EAAKEVALV+K LYD ++++E+ ++EWY +
Sbjct: 364 XXXXXXXXAGAPAQMGLLNGIESFCMKASAEAAKEVALVIKGLYDEDILDEDVIVEWYNK 423

Query: 483 GVVGANKSSPIWNHVKPFIEWLQNAESETEEE 506
           GV    KSSP+  +V PFIEWLQNAESE+EEE
Sbjct: 424 GV----KSSPVLKNVTPFIEWLQNAESESEEE 439

[Close]

BLAST of Carg20553 vs. Swiss-Prot
Match: sp|P48724|IF5_PHAVU (Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris OX=3885 GN=EIF5 PE=2 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 2.3e-114
Identity = 307/444 (69.14%), Postives = 347/444 (78.15%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGA N DDAFYRYKMPRMVTKIEGRGNGIKTNVVNMV+IAK L RPASYTTKYFGCEL
Sbjct: 4   QNIGAGNSDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKRLARPASYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTS VNGAH+TAKLAGLLE FIKKYVQCYGCGNPETEI+ITK QMI +KC
Sbjct: 64  GAQSKFDEKTGTSHVNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKC 123

Query: 183 AACGFISDVDMRDKITTFILKN-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGF+SDVDMRDK+TTFI+KN                    XXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKEXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTD 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QW TD
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQWLTD 243

Query: 303 TSLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVN 362
           TSL+A++QRI+EQLSAVTADMV                         + N    +  +V 
Sbjct: 244 TSLDASRQRIKEQLSAVTADMVXXXXXXXXXXXXXXXXXXXXXXXXXSKN----YGTVVA 303

Query: 363 EIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAV 422
           E+K  LKKG  A+ L S L +L    QE ++ALVEALF+G  KGF +E +KKKN+ AAAV
Sbjct: 304 EVKANLKKGFGASELLSHLAALPVPAQEKMSALVEALFEGTEKGFGRETLKKKNYFAAAV 363

Query: 423 ALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKS 482
           A EGSQI LL AIE FC   +S A KEVALVLK+LYD++++EEE ++ WYQ+G+ G NK+
Sbjct: 364 AEEGSQILLLHAIEEFCCKPNSNALKEVALVLKTLYDADVLEEEAIVLWYQKGLKGDNKN 423

Query: 483 SPIWNHVKPFIEWLQNAESETEEE 506
           S IW + +PFI+WLQNAESE++EE
Sbjct: 424 SKIWKNAQPFIDWLQNAESESDEE 443

[Close]

BLAST of Carg20553 vs. Swiss-Prot
Match: sp|P55876|IF5_MAIZE (Eukaryotic translation initiation factor 5 OS=Zea mays OX=4577 GN=EIF5 PE=2 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.6e-112
Identity = 322/449 (71.71%), Postives = 369/449 (82.18%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNRDDAFYRYKMPRM+TKIEGRGNGIKTNVVNMV+IAKAL RPASYTTKYFGCEL
Sbjct: 4   QNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTG SLVNGAHDTAKLAGLLE FIKKYVQCYGCGNPETEI+I+KTQMI++KC
Sbjct: 64  GAQSKFDEKTGISLVNGAHDTAKLAGLLEVFIKKYVQCYGCGNPETEILISKTQMISLKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGF+SDVDMRDK+TTFIL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGFVSDVDMRDKLTTFIL----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  QTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNG--------NGVS 362
           S+EAAKQR+QEQLSA TA+MVMLSTEET    K   H+  S NG+              S
Sbjct: 244 SIEAAKQRMQEQLSAATAEMVMLSTEETEKKMKQPTHKDGSTNGSAKEIPNDKPAVTKPS 303

Query: 363 PHVALVNEIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKK 422
           P+  L+ +IK  L    + + LK+ L S +  PQ+++NA +EALF GVGKGF+KEV+K K
Sbjct: 304 PYEELIGDIKASLGSAPTPSQLKAVLASSTLPPQDVMNAPLEALFGGVGKGFTKEVVKNK 363

Query: 423 NFLAAAVALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRG 482
            +LA AV  EG+Q  L++AIE+F    + EA KEV +VLK+LYD ++++EE +++WY   
Sbjct: 364 KYLAVAVPDEGAQTLLVQAIEAFGGKCNPEALKEVPVVLKALYDGDILDEETIVDWY-ND 423

Query: 483 VVGANKSSPIWNHVKPFIEWLQNAESETE 504
            V A K S +  + KPF+EWLQ+AES+ E
Sbjct: 424 AVAAGKDSQVVKNAKPFVEWLQSAESDEE 447

[Close]

BLAST of Carg20553 vs. Swiss-Prot
Match: sp|Q9VXK6|IF5_DROME (Eukaryotic translation initiation factor 5 OS=Drosophila melanogaster OX=7227 GN=eIF5 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.2e-40
Identity = 76/134 (56.72%), Postives = 98/134 (73.13%), Query Frame = 0


Query: 72  DAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCELGAQSKFDEK 131
           D FYRYKMPR+  K+EG+GNGIKT +VNM E+A+A+GRPA+Y TKYFGCELGAQ+ FD K
Sbjct: 12  DIFYRYKMPRLQAKVEGKGNGIKTVLVNMAEVARAIGRPATYPTKYFGCELGAQTLFDHK 71

Query: 132 TGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIIT-KTQMITMKCAACGFISD 191
               +VNG+HD  KL  LL+ FI+K+V C  C NPET + ++ K Q I+  C ACGF   
Sbjct: 72  NERFVVNGSHDVNKLQDLLDGFIRKFVLCPECDNPETNLTVSAKNQTISQSCKACGFHGL 131

Query: 192 VDMRDKITTFILKN 205
           + +  K+ TFI+KN
Sbjct: 132 LKVNHKVNTFIVKN 145

[Close]

BLAST of Carg20553 vs. TrEMBL
Match: tr|A0A2P5Q9V7|A0A2P5Q9V7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD31780 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.2e-148
Identity = 371/515 (72.04%), Postives = 403/515 (78.25%), Query Frame = 0


Query: 16  MSERATLFLSSIGLLGEYCPTSRKK-YSCAETIGCMHLELPGGHSNSPR----------- 75
           MSERA+LFLSSIGLLGEYCPTSRKK  S    I CMH+E    HS   R           
Sbjct: 1   MSERASLFLSSIGLLGEYCPTSRKKNRSSYSEISCMHIEANQRHSLGFRFMQHLPSARRQ 60

Query: 76  ------------NIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPA 135
                       NIGASN DDAFYRYKMP+M+TKIEGRGNGIKTNVVNMVEIAKAL RPA
Sbjct: 61  PVCLSLIKMALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVEIAKALARPA 120

Query: 136 SYTTKYFGCELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEII 195
           SYTTKYFGCELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEI+
Sbjct: 121 SYTTKYFGCELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIV 180

Query: 196 ITKTQMITMKCAACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXX 255
           ITKTQM+T+KCAACGF+SDVDMRDK+TTFILKN           XXXXXXXXXXXXXXXX
Sbjct: 181 ITKTQMLTLKCAACGFVSDVDMRDKLTTFILKN----------PXXXXXXXXXXXXXXXX 240

Query: 256 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 315
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDHSPTQSQ 300

Query: 316 XXXXXQWQTDTSLEAAKQRIQEQLSAVTADMVMLST-EETTSSKKPSEHEKSSINGNKNG 375
                +WQTDTSLEAA+QRIQEQLSAVTADMVMLST EE  S KK  E E  ++      
Sbjct: 301 ADENKEWQTDTSLEAAEQRIQEQLSAVTADMVMLSTDEEKKSVKKSPEREVKALE----- 360

Query: 376 NGVSPHVALVNEIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEV 435
           NGV+ H  LV+EIK YL  GSSAA LKSFL SLSGT QEI++AL   LF  VGKGF++EV
Sbjct: 361 NGVTAHEKLVDEIKKYLNTGSSAAQLKSFLGSLSGTSQEIMDALFTVLFHDVGKGFAEEV 420

Query: 436 MKKKNFLAAAVALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEW 495
            KKK++LAAA   EG Q+ LL +IESFC   + EAAKE ALVLK LYD++++EEEF++EW
Sbjct: 421 TKKKSYLAAAAREEGWQMMLLSSIESFCGKANLEAAKEAALVLKVLYDNDILEEEFIVEW 480

Query: 496 YQRGVVGANKSSPIWNHVKPFIEWLQNAESETEEE 506
           YQ+GV G NKSS IW + KPFIEWLQNAESETEEE
Sbjct: 481 YQKGVAGGNKSSQIWKNSKPFIEWLQNAESETEEE 500

[Close]

BLAST of Carg20553 vs. TrEMBL
Match: tr|A0A1S3BCI3|A0A1S3BCI3_CUCME (eukaryotic translation initiation factor 5-like OS=Cucumis melo OX=3656 GN=LOC103488416 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.0e-140
Identity = 376/444 (84.68%), Postives = 392/444 (88.29%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASNRDDAFYRYKMP+MVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL
Sbjct: 4   QNIGASNRDDAFYRYKMPKMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTSLVNGAH+TAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC
Sbjct: 64  GAQSKFDEKTGTSLVNGAHETAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGFISDVDMRDK+TTFILK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGFISDVDMRDKLTTFILK---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDT 243

Query: 303 SLEAAKQRIQEQLSAV-TADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSPHVALVN 362
           SLEAAKQRIQEQLSAV                            GNKNGNGVS HV+L+ 
Sbjct: 244 SLEAAKQRIQEQLSAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKNGNGVSTHVSLIQ 303

Query: 363 EIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAV 422
           EIKD+LKKGSS  +LKSFLESLSGT QEIVNALVEALFDGVGKGFSKEV+KKK FLA   
Sbjct: 304 EIKDHLKKGSSTTDLKSFLESLSGTRQEIVNALVEALFDGVGKGFSKEVVKKKKFLAVVA 363

Query: 423 ALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKS 482
           A EGSQI LLR+IESFC+NTS EA KEVALVLKSLYD ++IEEEFVLEWY++GV GANKS
Sbjct: 364 AEEGSQITLLRSIESFCINTSPEAGKEVALVLKSLYDGDVIEEEFVLEWYKQGVAGANKS 423

Query: 483 SPIWNHVKPFIEWLQNAESETEEE 506
           S IW +VKPFIEWLQNAESETEEE
Sbjct: 424 SQIWKYVKPFIEWLQNAESETEEE 444

[Close]

BLAST of Carg20553 vs. TrEMBL
Match: tr|A0A0B0NJ45|A0A0B0NJ45_GOSAR (Eukaryotic translation initiation factor 5 OS=Gossypium arboreum OX=29729 GN=F383_17868 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.3e-138
Identity = 367/444 (82.66%), Postives = 395/444 (88.96%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASN DDAFYRYKMP+M+TKIEGRGNGIKTNVVNMVEIAKAL RPASYTTKYFGCEL
Sbjct: 4   QNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVEIAKALARPASYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEI+ITKTQM+T+KC
Sbjct: 64  GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIVITKTQMLTLKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGF+SDVDMRDK+TTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGFVSDVDMRDKLTTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLSTEETTSS-KKPSEHEKSSINGNKNGNGVSPHVALVN 362
           SLEAA+QRIQEQLSAVTADMVMLSTEE   S KK  E E  +       NGV  H  LV+
Sbjct: 244 SLEAAQQRIQEQLSAVTADMVMLSTEEEKKSVKKSPEREVKA-----QENGVIAHEKLVD 303

Query: 363 EIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAV 422
           EIK YL KGSSAA LKSFL SL GT QEI++AL  ALF  VGKGF++EV KKKN+L AA 
Sbjct: 304 EIKKYLNKGSSAAQLKSFLGSLPGTSQEIMDALFTALFHNVGKGFAEEVTKKKNYLVAAA 363

Query: 423 ALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKS 482
             EG Q+ LL +IESFC   + EAAKEVALVLK+LYD++++EEEF++EWYQ+GV G NKS
Sbjct: 364 REEGWQMMLLNSIESFCGKANLEAAKEVALVLKALYDNDILEEEFIMEWYQKGVAGGNKS 423

Query: 483 SPIWNHVKPFIEWLQNAESETEEE 506
           S IW + KPFIEWLQNAESETEEE
Sbjct: 424 SQIWKNSKPFIEWLQNAESETEEE 442

[Close]

BLAST of Carg20553 vs. TrEMBL
Match: tr|A0A2P5YT61|A0A2P5YT61_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA01836 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.4e-137
Identity = 331/444 (74.55%), Postives = 360/444 (81.08%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASN DDAFYRYKMP+M+TKIEGRGNGIKTNVVNMVEIAKAL RPASYTTKYFGCEL
Sbjct: 4   QNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVEIAKALARPASYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEI+ITKTQM+T+KC
Sbjct: 64  GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIVITKTQMLTLKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGF+SDVDMRDK+TTFILKN                                   XXX
Sbjct: 124 AACGFVSDVDMRDKLTTFILKN-----------------------------------XXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   WQTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGAWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLSTEETTSS-KKPSEHEKSSINGNKNGNGVSPHVALVN 362
           SLEAA+QRIQEQLSAVTADMVMLSTEE   S KK  E E  +       NGV+ H  LV+
Sbjct: 244 SLEAAQQRIQEQLSAVTADMVMLSTEEEKKSVKKSPEREVKA-----QENGVTAHEKLVD 303

Query: 363 EIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAV 422
           EIK YLKKGSSAA LKSFL SLSGT QEI++AL  ALF  VGKGF++EV KKKN+L AA 
Sbjct: 304 EIKKYLKKGSSAAQLKSFLGSLSGTSQEIMDALFTALFHNVGKGFAEEVTKKKNYLVAAA 363

Query: 423 ALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKS 482
             EG Q+ LL +IESFC   + EAAKEVALVLK+LYD++++EEEF++EWYQ+GV G NKS
Sbjct: 364 REEGWQMMLLNSIESFCGKANLEAAKEVALVLKALYDNDILEEEFIMEWYQKGVAGGNKS 407

Query: 483 SPIWNHVKPFIEWLQNAESETEEE 506
           S IW + KPFIEWLQNAESETEEE
Sbjct: 424 SQIWKNSKPFIEWLQNAESETEEE 407

[Close]

BLAST of Carg20553 vs. TrEMBL
Match: tr|A0A0D2S7A9|A0A0D2S7A9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G242000 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.2e-137
Identity = 364/444 (81.98%), Postives = 394/444 (88.74%), Query Frame = 0


Query: 63  RNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCEL 122
           +NIGASN DDAFYRYKMP+M+TKIEGRGNGIKTNVVNMVEIAKAL RPASYTTKYFGCEL
Sbjct: 4   QNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVEIAKALARPASYTTKYFGCEL 63

Query: 123 GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKC 182
           GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEI+ITKTQM+T+KC
Sbjct: 64  GAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIVITKTQMLTLKC 123

Query: 183 AACGFISDVDMRDKITTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           AACGF+SDVDMRDK+TTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124 AACGFVSDVDMRDKLTTFILKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQTDT 302
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QWQTDT
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQWQTDT 243

Query: 303 SLEAAKQRIQEQLSAVTADMVMLST-EETTSSKKPSEHEKSSINGNKNGNGVSPHVALVN 362
           SLEAA+QRIQEQLSAVTADMVMLST EE  S KK  E E  ++      NGV+ H  L++
Sbjct: 244 SLEAAQQRIQEQLSAVTADMVMLSTDEEKKSVKKSPEREAKALE-----NGVTAHEKLLD 303

Query: 363 EIKDYLKKGSSAANLKSFLESLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAV 422
           EIK YL  GSSAA LKSFL SLSGT QEI++AL   LF  VGKGF++EV KKKN+LAAA 
Sbjct: 304 EIKKYLNTGSSAAQLKSFLGSLSGTSQEIMDALFTVLFHDVGKGFAEEVTKKKNYLAAAA 363

Query: 423 ALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQRGVVGANKS 482
             EG Q+ LL +IESFC   + EAAKE ALVLK LYD++++EEEF++EWYQ+GV G NKS
Sbjct: 364 REEGWQMMLLNSIESFCGKANLEAAKEAALVLKVLYDNDILEEEFIMEWYQKGVAGGNKS 423

Query: 483 SPIWNHVKPFIEWLQNAESETEEE 506
           S IW + KPFIEWLQNAESETEEE
Sbjct: 424 SQIWKNSKPFIEWLQNAESETEEE 442

The following BLAST results are available for this feature:

BLAST of Carg20553 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536674.1	9.2e-181	99.10	probable eukaryotic translation initiation factor 5-1 [Cucurbita pepo subsp. pep...	[more]
XP_023001893.1	4.6e-180	98.42	probable eukaryotic translation initiation factor 5-1 [Cucurbita maxima] >XP_023...	[more]
XP_022951565.1	6.0e-180	98.42	probable eukaryotic translation initiation factor 5-1 [Cucurbita moschata] >XP_0...	[more]
XP_022131574.1	3.3e-154	88.76	eukaryotic translation initiation factor 5-like [Momordica charantia] >XP_022131...	[more]
XP_023546001.1	9.0e-152	82.96	eukaryotic translation initiation factor 5-like [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of Carg20553 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G77840.1	1.6e-126	61.16	Translation initiation factor IF2/IF5	[more]
AT1G36730.1	1.8e-117	72.57	Translation initiation factor IF2/IF5	[more]
AT5G20920.1	3.3e-07	29.03	eukaryotic translation initiation factor 2 beta subunit	[more]
AT4G18300.1	4.5e-04	28.87	Trimeric LpxA-like enzyme	[more]
AT1G36732.1	5.8e-04	80.00	conserved peptide upstream open reading frame 19	[more]

BLAST of Carg20553 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9S825\|IF5Z_ARATH	2.9e-125	61.16	Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9C8F1\|IF5Y_ARATH	3.2e-116	72.57	Probable eukaryotic translation initiation factor 5-1 OS=Arabidopsis thaliana OX...	[more]
sp\|P48724\|IF5_PHAVU	2.3e-114	69.14	Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris OX=3885 GN=EIF5...	[more]
sp\|P55876\|IF5_MAIZE	1.6e-112	71.71	Eukaryotic translation initiation factor 5 OS=Zea mays OX=4577 GN=EIF5 PE=2 SV=1	[more]
sp\|Q9VXK6\|IF5_DROME	8.2e-40	56.72	Eukaryotic translation initiation factor 5 OS=Drosophila melanogaster OX=7227 GN...	[more]

BLAST of Carg20553 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P5Q9V7\|A0A2P5Q9V7_GOSBA	5.2e-148	72.04	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD31780 PE=4 SV...	[more]
tr\|A0A1S3BCI3\|A0A1S3BCI3_CUCME	1.0e-140	84.68	eukaryotic translation initiation factor 5-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0B0NJ45\|A0A0B0NJ45_GOSAR	8.3e-138	82.66	Eukaryotic translation initiation factor 5 OS=Gossypium arboreum OX=29729 GN=F38...	[more]
tr\|A0A2P5YT61\|A0A2P5YT61_GOSBA	2.4e-137	74.55	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA01836 PE=4 SV...	[more]
tr\|A0A0D2S7A9\|A0A0D2S7A9_GOSRA	3.2e-137	81.98	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G242000 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0005515	protein binding
GO:0003743	translation initiation factor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006413	translational initiation

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR016190	Transl_init_fac_IF2/IF5_Zn-bd
IPR016189	Transl_init_fac_IF2/IF5_N
IPR016021	MIF4-like_sf
IPR003307	W2_domain
IPR002735	Transl_init_fac_IF2/IF5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20553-RA	Carg20553-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 218..238
None	No IPR available	GENE3D	G3DSA:2.20.25.350		coord: 160..204 e-value: 4.1E-17 score: 63.6
None	No IPR available	GENE3D	G3DSA:3.30.30.50		coord: 83..158 e-value: 1.9E-30 score: 106.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..353
None	No IPR available	PANTHER	PTHR23001:SF8	EUKARYOTIC TRANSLATION INITIATION FACTOR 5-2-RELATED	coord: 63..505
None	No IPR available	PANTHER	PTHR23001	EUKARYOTIC TRANSLATION INITIATION FACTOR	coord: 63..505
None	No IPR available	CDD	cd11561	W2_eIF5	coord: 359..503 e-value: 4.89493E-38 score: 136.207
IPR002735	Translation initiation factor IF2/IF5	SMART	SM00653	eIF2Bneu4	coord: 74..188 e-value: 4.1E-63 score: 225.7
IPR002735	Translation initiation factor IF2/IF5	PFAM	PF01873	eIF-5_eIF-2B	coord: 70..186 e-value: 5.3E-37 score: 126.2
IPR003307	W2 domain	SMART	SM00515	542_3	coord: 414..501 e-value: 3.8E-27 score: 106.2
IPR003307	W2 domain	PFAM	PF02020	W2	coord: 427..505 e-value: 3.0E-18 score: 65.6
IPR003307	W2 domain	PROSITE	PS51363	W2	coord: 349..505 score: 23.097
IPR016021	MIF4G-like domain superfamily	GENE3D	G3DSA:1.25.40.180		coord: 354..505 e-value: 3.3E-26 score: 94.1
IPR016189	Translation initiation factor IF2/IF5, N-terminal	SUPERFAMILY	SSF100966	Translation initiation factor 2 beta, aIF2beta, N-terminal domain	coord: 69..160
IPR016190	Translation initiation factor IF2/IF5, zinc-binding	SUPERFAMILY	SSF75689	Zinc-binding domain of translation initiation factor 2 beta	coord: 157..192
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 360..499

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20553	Cla022077	Watermelon (97103) v1	carwmB0649
Carg20553	Csa2G310390	Cucumber (Chinese Long) v2	carcuB0669
Carg20553	MELO3C011371	Melon (DHL92) v3.5.1	carmeB0649
Carg20553	ClCG08G010920	Watermelon (Charleston Gray)	carwcgB0633
Carg20553	CSPI02G15950	Wild cucumber (PI 183967)	carcpiB0678
Carg20553	CmaCh05G004820	Cucurbita maxima (Rimu)	carcmaB0921
Carg20553	CmaCh12G001410	Cucurbita maxima (Rimu)	carcmaB0920
Carg20553	CmoCh05G005050	Cucurbita moschata (Rifu)	carcmoB0894
Carg20553	Lsi08G009450	Bottle gourd (USVL1VR-Ls)	carlsiB593
Carg20553	Cp4.1LG11g04190	Cucurbita pepo (Zucchini)	carcpeB0924
Carg20553	Cp4.1LG07g01200	Cucurbita pepo (Zucchini)	carcpeB0925
Carg20553	CsGy2G016550	Cucumber (Gy14) v2	carcgybB0645
Carg20553	MELO3C011371.2	Melon (DHL92) v3.6.1	carmedB0659
Carg20553	CsaV3_1G023010	Cucumber (Chinese Long) v3	carcucB0680
Carg20553	Cla97C08G153810	Watermelon (97103) v2	carwmbB0679
Carg20553	Bhi04G000590	Wax gourd	carwgoB0764

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20553	Carg09228	Silver-seed gourd	carcarB164

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20553	Cucurbita moschata (Rifu)	carcmoB0893
Carg20553	Wax gourd	carwgoB0765