Carg19623 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19623
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Nucleic acid-binding-like protein
Location	Cucurbita_argyrosperma_scaffold_117 : 294857 .. 297918 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGGCTTAATCCGGATGTTAACTTGGAATGAACTCGGTGATTCTCTCGATGTCTTCTCGGGGCCGACATTTCAATTTGAACGATGCCGGCCGAAACTCAGTCATGGAGTTAGATGGCGTCAAAGGCTGTAGGAAGAAGAAGATGATGATCCGCTTCATAAATTTATCGATTACGCGAGGTCTTTGATGTTATTTGAAGACGAAGAAAACTTCGATCCTAATGTTAATGGAACGGAGACCAATGCGGCCGGTTGGAGTTTGATCGCCTCCCGGTTCCTCAGAACTTGTATCGCCTACTCGAGTTCTGTTACCGCTGCGATTTTGCTATCTGAGCTCTCGCAGGTACCGCGAATTCGAACTCCTCTATAAGGTTTTTTTCTTCGACTGTAGATACTTTGAGCAAAAATTTATGTTAATTGCCTGATTTCCAATCAAAGGAAGATGCAACAGTGAGGACTGCCTGAATTCTTGATGTTTCACAATTGGATTAAAGATTTCACCGTAATTGATTCCAGGAGTTCAACGGAGTCTCTTGGTTACAAGTTTGAATTTGTAGTAATACGCCGTCTGAATTCCTTCTTAATATGTACATCCACTTATTAGTAAGTGTTCATAACAACGAGAGGGTGGTATTAGGGCCCGTGTTTTATTCTAAATGAGGGATGATTACTTAATACTCTGTCATATCTTGGTTCTAGGCTTTTGAAATTGATGCGTCCTTAGAGTTGCTTGATCCAATTGTAGTCCTGTTGTCCTTTTAAGTATTAGGCAATGGGGGACAACCTCGAGTAATCCAGATTGCACCCTGACCACACATATTGGTTTTTAAGTATTAGTATCCTCTCAACTGTCCTTTGCGATTCGGTATCTCTTCTTCTGAGAGGCTAGTCAACTGTCAATTATGAAATTATCCATGTGAGTAATGATTGGTTGCCGCCCAAGCTTCATAATCTGAATTGGAAATAAAAAAATTTAATGGCGATGAAGGCATTCATTTCTTCTCTAGGAGGAGAATGCATTCTGAGCTTCTTAATCTCTCCAGTCAAGTTTGTGTGATTAGCGTATATAGGAAGAATAAAATTTTGCCAAAGCATAAAATTGTTTACACTGATGTAACCTGATTGATCCAATTTTCTAGTGGTGGGAGTTGGGATTAGCCATGAAAGCTCTGGTGACAAGAGATGTTCTGGGATGAAAGAAATTTAGCTGAAGTAAAACATGGTGCATAATGCAGCATCTTGTACAGCTGCATTTATGATGTTGGTGTTCTTTTGTTTTTCCCCCTCACTAAAATGGTCAATGCTTAAACTTTAGAGGCTGTAGTTTCACAAAAGGATGGATTTTGGATATCCAATCATGAACTGACTGCCTTATCTTCAATATTTGCAGGATTGAATCTATTGGTCCACTGGAAATTTATGAGAAGATTAATGGCTTGCGGATGATACAAATCAGTCTTGTTGATAATGATGATTTCAATTTAAAGTTTATCGTGGGGTGAACAGGGGTTACTAGCCAATATTATATGGTGAATCTTTTAGTTTGATGTTAACTATTTCAAGAATATTCTTGCATGATTATATCAACGTAACAGTACTCATTTGAACAGTGTTGGTTTACTTGCACTTGATAGACCATAAATTGCAACTGTAATCGAGAATGGCATTGGAACAAGTGATGATCTTTGTCTTCAATATGTTGGTGCAACACAGTTATATTTGGTGCCTTGCATTCATCATAAGGAGCAAGTGAGTTAGTGCAACACAGTTATATTTGGTGCCTTGCATTCATCATAAGGAGCAAGTGAGTTGTAGAACCCCACCTCTCCCCACACCATGCACACACAAAATTAAGAGACTTCCCTGTATCTTGGATCCCGTCAATATGTAAATATTCCACAACACAGGTCTCTGTTTTAGCACAAATATAAACCAAGCTTCAAGAACGCTTAGCACGTCGTATCCTTCACTTAGTACATCTTTATGAAGATAAATCTTAATAGCCATCTGTTTATGAAGTTTACAGTCTTTTGTGGTCGACCTTCAAGACAAGATGACTGGCATTAGCTTATATGGTAAGGTTTTATGAGTCTTTACATTTATATAGCTCTTCAAATAACAAAAGATTCTCATCACCTATACTTCCACTCATTTTTGAGTTCCACTTTTCTTTTTCTTTTCTTTGTGTCTTCTCTTGTAAAGATCGGTGGACATACAGTATATATAAGTGTCCTGACATGCACCATAAACAAGAATCGGTGAGCTAATTCAAACAATTTACTCCGTTATCTAATAAATAAATTGAAAGTCTTGGACAATTTGAAATGCTTATGTACATAAAATAATAACTTGTCGTTGATTTGAGGATTTTCTCCTTTTCGATATTTTGGCGATTTCTTCATGGCATTTCTAATTTGATTTGAGTCTTTTGCTTGTGAAGCTTGGAGGCTTTATGGATTGAGAATCATGTTGGAGCTTCTTTTGTCAACTTTAGCTGCTTGCCAACATTGTTTTCTCCTGGTCATCTTAAACTTTCACGACTTTCTGATCTTACGAAGCAATACTCATGGTACAAAGGTGAAGCTTTTTCTTTTTCCTTCTCGTTCTTTCTTTGTCTATAGTATGTTATGTGTGATGAGGAACTTTTCAAAGTGGAAAGGTTTCAGATTTCTTTCCATTTACCAGGACCACTAGAGAGCTCTAATCGCCCATCCCCAACAGGCCACCTCGCTGAAAGGATTTATGGGAGCCGTACATCAATATCCTTTGGAGATCAAGTGAGGCAAAGCTCCGTACCTTTGTTGCTTAGAAGCAGCAAAGTAGGGATTCCTCATTCTTATAACGTAATATATAAACAACAAACGTTAGGAGAGAGACAAATGACCAATGAAGTTTCTCTTTTTGCAACCTTTATTGGGAATCTAGGGAAAATTAGGCTTGATAACGATTTTATTACTGATTTCTGTTTTTGAAAATCATGTTTGGTTCCTCTTAATTTCTTTATTATGGATTTAGGAACATAATAGTGAATTGAAGGAGGAAGATCGGCAGATGTGGAAATAA

mRNA sequence

AATGGCTTAATCCGGATGTTAACTTGGAATGAACTCGGTGATTCTCTCGATGTCTTCTCGGGGCCGACATTTCAATTTGAACGATGCCGGCCGAAACTCAGTCATGGAGTTAGATGGCGTCAAAGGCTGTAGGAAGAAGAAGATGATGATCCGCTTCATAAATTTATCGATTACGCGAGGTCTTTGATGTTATTTGAAGACGAAGAAAACTTCGATCCTAATGTTAATGGAACGGAGACCAATGCGGCCGGTTGGAGTTTGATCGCCTCCCGGTTCCTCAGAACTTGTATCGCCTACTCGAGTTCTGTTACCGCTGCGATTTTGCTATCTGAGCTCTCGCAGGCTTTTGAAATTGATGCGTCCTTAGAGTTGCTTGATCCAATTGTAGTCCTGTTGATTGAATCTATTGGTCCACTGGAAATTTATGAGAAGATTAATGGCTTGCGGATGATACAAATCAGTCTTGTTGATAATGATGATTTCAATTTAAAGTTTATCTCTTTTGTGGTCGACCTTCAAGACAAGATGACTGGCATTAGCTTATATGGTAAGATCGGTGGACATACAGTATATATAAGTGTCCTGACATGCACCATAAACAAGAATCGCTTGGAGGCTTTATGGATTGAGAATCATGTTGGAGCTTCTTTTGTCAACTTTAGCTGCTTGCCAACATTGTTTTCTCCTGGTCATCTTAAACTTTCACGACTTTCTGATCTTACGAAGCAATACTCATGGTACAAAGGACCACTAGAGAGCTCTAATCGCCCATCCCCAACAGGCCACCTCGCTGAAAGGATTTATGGGAGCCGTACATCAATATCCTTTGGAGATCAAGAACATAATAGTGAATTGAAGGAGGAAGATCGGCAGATGTGGAAATAA

Coding sequence (CDS)

ATGTTATTTGAAGACGAAGAAAACTTCGATCCTAATGTTAATGGAACGGAGACCAATGCGGCCGGTTGGAGTTTGATCGCCTCCCGGTTCCTCAGAACTTGTATCGCCTACTCGAGTTCTGTTACCGCTGCGATTTTGCTATCTGAGCTCTCGCAGGCTTTTGAAATTGATGCGTCCTTAGAGTTGCTTGATCCAATTGTAGTCCTGTTGATTGAATCTATTGGTCCACTGGAAATTTATGAGAAGATTAATGGCTTGCGGATGATACAAATCAGTCTTGTTGATAATGATGATTTCAATTTAAAGTTTATCTCTTTTGTGGTCGACCTTCAAGACAAGATGACTGGCATTAGCTTATATGGTAAGATCGGTGGACATACAGTATATATAAGTGTCCTGACATGCACCATAAACAAGAATCGCTTGGAGGCTTTATGGATTGAGAATCATGTTGGAGCTTCTTTTGTCAACTTTAGCTGCTTGCCAACATTGTTTTCTCCTGGTCATCTTAAACTTTCACGACTTTCTGATCTTACGAAGCAATACTCATGGTACAAAGGACCACTAGAGAGCTCTAATCGCCCATCCCCAACAGGCCACCTCGCTGAAAGGATTTATGGGAGCCGTACATCAATATCCTTTGGAGATCAAGAACATAATAGTGAATTGAAGGAGGAAGATCGGCAGATGTGGAAATAA

Protein sequence

MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFEIDASLELLDPIVVLLIESIGPLEIYEKINGLRMIQISLVDNDDFNLKFISFVVDLQDKMTGISLYGKIGGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHLKLSRLSDLTKQYSWYKGPLESSNRPSPTGHLAERIYGSRTSISFGDQEHNSELKEEDRQMWK

Homology

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BLAST of Carg19623 vs. NCBI nr
Match: XP_008438949.1 (PREDICTED: uncharacterized protein LOC103483891 isoform X2 [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 2.7e-26
Identity = 138/480 (28.75%), Postives = 153/480 (31.87%), Query Frame = 0


Query: 1   MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF------ 60
           + FED+E+FDPNVNGTET+  GWS IASR LRTCIAYSSSVT AILLSELSQA+      
Sbjct: 47  LAFEDDEDFDPNVNGTETDTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWYEQHRV 106

Query: 61  --------------------------EIDASLE-------------LLDPIVV------- 120
                                      ID+  E             +LD  ++       
Sbjct: 107 GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVILDEFILPGTNIHM 166

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 167 LTLGDFWSSNTIDLYLHRRFYDLVDGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLX 226

[Close]

BLAST of Carg19623 vs. NCBI nr
Match: XP_022938337.1 (uncharacterized protein LOC111444466 [Cucurbita moschata])

HSP 1 Score: 123.6 bits (309), Expect = 8.6e-25
Identity = 136/480 (28.33%), Postives = 153/480 (31.87%), Query Frame = 0


Query: 1   MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFE----- 60
           + FEDEE+FDPNV GTET   GWS IASR LRTCIAYSSSVT AILLSELSQA+      
Sbjct: 48  LAFEDEEDFDPNVKGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRI 107

Query: 61  ---------------------------IDASLE--------LLDPIVV------------ 120
                                      ID+  E        +L+ ++V            
Sbjct: 108 GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHM 167

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 168 LTLGDFWSSNTIDLYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYXX 227

[Close]

BLAST of Carg19623 vs. NCBI nr
Match: XP_023538883.1 (uncharacterized protein LOC111799677 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 123.6 bits (309), Expect = 8.6e-25
Identity = 136/480 (28.33%), Postives = 153/480 (31.87%), Query Frame = 0


Query: 1   MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFE----- 60
           + FEDEE+FDPNV GTET   GWS IASR LRTCIAYSSSVT AILLSELSQA+      
Sbjct: 48  LAFEDEEDFDPNVKGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRI 107

Query: 61  ---------------------------IDASLE--------LLDPIVV------------ 120
                                      ID+  E        +L+ ++V            
Sbjct: 108 GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHM 167

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 168 LTLGDFWSSNTIDLYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYXX 227

[Close]

BLAST of Carg19623 vs. NCBI nr
Match: XP_004134503.1 (PREDICTED: uncharacterized protein LOC101215087 isoform X2 [Cucumis sativus] >KGN57165.1 hypothetical protein Csa_3G166300 [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 1.9e-24
Identity = 133/480 (27.71%), Postives = 152/480 (31.67%), Query Frame = 0


Query: 1   MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF------ 60
           + FED+E+FDPN+NGTET+  GW+ IASR LRTC+AYSSSVT AILLSELSQA+      
Sbjct: 47  LAFEDDEDFDPNINGTETHTPGWTWIASRVLRTCMAYSSSVTPAILLSELSQAWYEQHRV 106

Query: 61  --------------------------EIDASLE-------------LLDPIVV------- 120
                                      ID+  E             +LD  ++       
Sbjct: 107 GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLALSSVLEAVILDEFILPGTNIHM 166

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 167 LTLGDFWSSNTIDLYLHRRFYDLVNGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLX 226

[Close]

BLAST of Carg19623 vs. NCBI nr
Match: XP_022138138.1 (uncharacterized protein LOC111009381 isoform X3 [Momordica charantia])

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 129/466 (27.68%), Postives = 150/466 (32.19%), Query Frame = 0


Query: 1   MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF------ 60
           + FEDEE++DPNVNG ET+A GWS IASR L+TCIAYSS+VT AILLSELSQA+      
Sbjct: 45  LAFEDEEDYDPNVNGAETSAPGWSWIASRVLKTCIAYSSAVTPAILLSELSQAWYEQHRV 104

Query: 61  --------------------------EIDASLE--------LLDPIVV------------ 120
                                      ID+  E        +L+ ++V            
Sbjct: 105 GAPKKMPECINQLKKKIRRKKLPKTVSIDSIHEKNFLSLSSVLEAVIVDEFILPGTNIHM 164

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 165 LTLGDFWSSNTIDLYLHRRFYDLVNGILKKGRQIFLTGCYLRAAGGGSGHPRLLPTEYXX 224

[Close]

BLAST of Carg19623 vs. TAIR10
Match: AT3G17030.1 (Nucleic acid-binding proteins superfamily)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-08
Identity = 42/128 (32.81%), Postives = 56/128 (43.75%), Query Frame = 0


Query: 97  DDFNLKFISFVVDLQDKMTGISLY------------------------------------ 156
           D  N  F + + D++DK TGISLY                                    
Sbjct: 392 DFSNYPFRTMITDIRDKTTGISLYGVVTDISCDPNATGVVFSLKIEDTTGAIWAKLHFTN 451

Query: 157 ----GKIG-GHTVYISVLTCTINK-NRLEALWIENHVGASFVNFSCLPTLFSPGHLKL-S 182
               G++G GH VY+S L+C I K N +E LW E    A+FVN SCLP   +   + L S
Sbjct: 452 YWSLGRLGLGHVVYVSGLSCKITKENCIEMLWHEKDEKATFVNLSCLPAFLTSSCIHLIS 511

HSP 2 Score: 53.1 bits (126), Expect = 2.6e-07
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 16 TETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF 55
          TE +  GW  +ASR L+TC AYSS VTAAILLS+LSQA+
Sbjct: 54 TEASGPGWGWVASRILKTCTAYSSGVTAAILLSDLSQAW 92

[Close]

BLAST of Carg19623 vs. TrEMBL
Match: tr|A0A1S3AX73|A0A1S3AX73_CUCME (uncharacterized protein LOC103483891 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483891 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.8e-26
Identity = 138/480 (28.75%), Postives = 153/480 (31.87%), Query Frame = 0


Query: 1   MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF------ 60
           + FED+E+FDPNVNGTET+  GWS IASR LRTCIAYSSSVT AILLSELSQA+      
Sbjct: 47  LAFEDDEDFDPNVNGTETDTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWYEQHRV 106

Query: 61  --------------------------EIDASLE-------------LLDPIVV------- 120
                                      ID+  E             +LD  ++       
Sbjct: 107 GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVILDEFILPGTNIHM 166

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 167 LTLGDFWSSNTIDLYLHRRFYDLVDGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLX 226

[Close]

BLAST of Carg19623 vs. TrEMBL
Match: tr|A0A0A0L5D2|A0A0A0L5D2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G166300 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.3e-24
Identity = 133/480 (27.71%), Postives = 152/480 (31.67%), Query Frame = 0


Query: 1   MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF------ 60
           + FED+E+FDPN+NGTET+  GW+ IASR LRTC+AYSSSVT AILLSELSQA+      
Sbjct: 47  LAFEDDEDFDPNINGTETHTPGWTWIASRVLRTCMAYSSSVTPAILLSELSQAWYEQHRV 106

Query: 61  --------------------------EIDASLE-------------LLDPIVV------- 120
                                      ID+  E             +LD  ++       
Sbjct: 107 GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLALSSVLEAVILDEFILPGTNIHM 166

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 167 LTLGDFWSSNTIDLYLHRRFYDLVNGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLX 226

[Close]

BLAST of Carg19623 vs. TrEMBL
Match: tr|A0A1S4DSK5|A0A1S4DSK5_CUCME (uncharacterized protein LOC103483891 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483891 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.7e-19
Identity = 63/122 (51.64%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 100 NLKFISFVVDLQDKMTGISLYGKI------------------------------------ 159
           N  F SFV+DLQDKMTGISLYG +                                    
Sbjct: 410 NYPFRSFVIDLQDKMTGISLYGNVLDIANERNTTEAGFSMRIEDNTGEILAKLRFERSWS 469

Query: 160 -----GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSD 180
                 GHTV+IS LTCT NKNRLEALWIENHVGASFVN SCLP L +   L KLSRLSD
Sbjct: 470 LGRVSVGHTVFISGLTCTKNKNRLEALWIENHVGASFVNLSCLPALLTSSCLHKLSRLSD 529

HSP 2 Score: 86.7 bits (213), Expect = 7.7e-14
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 0


Query: 1   MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF 55
           + FED+E+FDPNVNGTET+  GWS IASR LRTCIAYSSSVT AILLSELSQA+
Sbjct: 47  LAFEDDEDFDPNVNGTETDTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAW 100

HSP 3 Score: 59.3 bits (142), Expect = 1.3e-05
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 71  IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI 105
           IESIGPLEI+EKINGLRMIQI LVDND F LKF+
Sbjct: 269 IESIGPLEIHEKINGLRMIQIILVDNDGFKLKFL 302

[Close]

BLAST of Carg19623 vs. TrEMBL
Match: tr|K7L3K2|K7L3K2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100793443 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.5e-14
Identity = 59/156 (37.82%), Postives = 77/156 (49.36%), Query Frame = 0


Query: 76  PLEIYEKINGLRMIQISLVDN-----DDFNLKFISFVVDLQDKMTGISLYGKIG------ 135
           PL  Y     L+  Q+SL  +     D  N  F SFVVDL++KM GISLYG +       
Sbjct: 380 PLGSYNSGQDLKFSQVSLPRDSQGTIDFSNYPFRSFVVDLRNKMNGISLYGVVTDIIKEN 439

Query: 136 ----------------------------------GHTVYISVLTCTINKNR-LEALWIEN 185
                                             GHTVY+S +TCT++K + +E LW EN
Sbjct: 440 DQQTVFSLRIADTSGEIWTKLHFARFWSLGRVSFGHTVYVSGMTCTMSKQKCMEVLWFEN 499

HSP 2 Score: 55.5 bits (132), Expect = 1.9e-04
Identity = 28/45 (62.22%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 10  DPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF 55
           D N +G  ++  GWS I SR L+TC+AYSS VT AILLSELSQA+
Sbjct: 56  DQNGDGEGSDGLGWSWIVSRILKTCVAYSSGVTPAILLSELSQAW 100

[Close]

BLAST of Carg19623 vs. TrEMBL
Match: tr|A0A0R0FHG2|A0A0R0FHG2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100807658 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.0e-13
Identity = 61/157 (38.85%), Postives = 76/157 (48.41%), Query Frame = 0


Query: 76  PLEIYEKINGLRMIQISLVDN-----DDFNLKFISFVVDLQDKMTGISLYGKIG------ 135
           PL  +     L+  Q+SL  +     D  N  F SFVVDL+ KMTGISLYG +       
Sbjct: 366 PLGSFNSSQDLKFSQVSLPRDSQGTIDFSNYPFRSFVVDLRIKMTGISLYGAVTDIIKEE 425

Query: 136 -----------------------------------GHTVYISVLTCTINKNR-LEALWIE 185
                                              GHTVYIS LTCT++K + LE LW E
Sbjct: 426 NNQQTVFSLRIADTSGEIWTKLHFARFWSLGRVSFGHTVYISGLTCTMSKQKCLEVLWFE 485

HSP 2 Score: 53.1 bits (126), Expect = 9.4e-04
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 10 DPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF 55
          D N +   ++  GWS I SR L+TCIAYSS VT AILLSELSQA+
Sbjct: 51 DRNKDDDGSDGLGWSWIVSRILKTCIAYSSGVTPAILLSELSQAW 95

The following BLAST results are available for this feature:

BLAST of Carg19623 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438949.1	2.7e-26	28.75	PREDICTED: uncharacterized protein LOC103483891 isoform X2 [Cucumis melo]	[more]
XP_022938337.1	8.6e-25	28.33	uncharacterized protein LOC111444466 [Cucurbita moschata]	[more]
XP_023538883.1	8.6e-25	28.33	uncharacterized protein LOC111799677 [Cucurbita pepo subsp. pepo]	[more]
XP_004134503.1	1.9e-24	27.71	PREDICTED: uncharacterized protein LOC101215087 isoform X2 [Cucumis sativus] >KG...	[more]
XP_022138138.1	2.8e-23	27.68	uncharacterized protein LOC111009381 isoform X3 [Momordica charantia]	[more]

BLAST of Carg19623 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17030.1	1.8e-08	32.81	Nucleic acid-binding proteins superfamily	[more]

BLAST of Carg19623 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19623 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AX73\|A0A1S3AX73_CUCME	1.8e-26	28.75	uncharacterized protein LOC103483891 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0L5D2\|A0A0A0L5D2_CUCSA	1.3e-24	27.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G166300 PE=4 SV=1	[more]
tr\|A0A1S4DSK5\|A0A1S4DSK5_CUCME	4.7e-19	51.64	uncharacterized protein LOC103483891 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|K7L3K2\|K7L3K2_SOYBN	4.5e-14	37.82	Uncharacterized protein OS=Glycine max OX=3847 GN=100793443 PE=4 SV=1	[more]
tr\|A0A0R0FHG2\|A0A0R0FHG2_SOYBN	1.0e-13	38.85	Uncharacterized protein OS=Glycine max OX=3847 GN=100807658 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR035201	Cdc24_OB1
IPR035203	Cdc24_OB3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19623-RA	Carg19623-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035203	Cell division control protein 24, OB domain 3	PFAM	PF17244	CDC24_OB3	coord: 125..187 e-value: 1.2E-10 score: 41.4
IPR035201	Cell division control protein 24, OB domain 1	PFAM	PF17246	CDC24_OB1	coord: 9..55 e-value: 4.5E-12 score: 46.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..232
None	No IPR available	PANTHER	PTHR36033	FAMILY NOT NAMED	coord: 125..182 coord: 7..54

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19623	Cla021792	Watermelon (97103) v1	carwmB0269
Carg19623	Csa3G166300	Cucumber (Chinese Long) v2	carcuB0306
Carg19623	MELO3C006713	Melon (DHL92) v3.5.1	carmeB0280
Carg19623	CSPI03G14960	Wild cucumber (PI 183967)	carcpiB0310
Carg19623	Cucsa.252560	Cucumber (Gy14) v1	carcgyB0329
Carg19623	CmoCh14G016220	Cucurbita moschata (Rifu)	carcmoB0388
Carg19623	Lsi05G015900	Bottle gourd (USVL1VR-Ls)	carlsiB254
Carg19623	Cp4.1LG03g11810	Cucurbita pepo (Zucchini)	carcpeB0395
Carg19623	Cp4.1LG08g05180	Cucurbita pepo (Zucchini)	carcpeB0396
Carg19623	CsGy3G015070	Cucumber (Gy14) v2	carcgybB0294
Carg19623	MELO3C006713.2	Melon (DHL92) v3.6.1	carmedB0292
Carg19623	CsaV3_3G015150	Cucumber (Chinese Long) v3	carcucB0309
Carg19623	Cla97C05G088140	Watermelon (97103) v2	carwmbB0287
Carg19623	Bhi01G000778	Wax gourd	carwgoB0365

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19623	Carg23736	Silver-seed gourd	carcarB318

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19623	Silver-seed gourd	carcarB079
Carg19623	Silver-seed gourd	carcarB316
Carg19623	Cucurbita maxima (Rimu)	carcmaB0391
Carg19623	Cucurbita maxima (Rimu)	carcmaB0392
Carg19623	Cucurbita maxima (Rimu)	carcmaB0393
Carg19623	Cucurbita maxima (Rimu)	carcmaB0394
Carg19623	Cucurbita moschata (Rifu)	carcmoB0389
Carg19623	Cucurbita moschata (Rifu)	carcmoB0390
Carg19623	Cucurbita moschata (Rifu)	carcmoB0391
Carg19623	Cucurbita pepo (Zucchini)	carcpeB0393
Carg19623	Cucurbita pepo (Zucchini)	carcpeB0394
Carg19623	Bottle gourd (USVL1VR-Ls)	carlsiB252
Carg19623	Melon (DHL92) v3.5.1	carmeB0279
Carg19623	Melon (DHL92) v3.6.1	carmedB0291
Carg19623	Watermelon (Charleston Gray)	carwcgB0271
Carg19623	Watermelon (Charleston Gray)	carwcgB0272
Carg19623	Watermelon (97103) v1	carwmB0270
Carg19623	Watermelon (97103) v2	carwmbB0288
Carg19623	Wax gourd	carwgoB0364