Cp4.1LG08g05180 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g05180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Nucleic acid-binding proteins superfamily
Location	Cp4.1LG08 : 990198 .. 997892 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCGTCAGTGTAGGCATAGGAAAACCGCGCAAATTTGGCAATCATCTTCCCGCTGAAAATGAACCTCAAATATAGGGCGTAGAAATGGCTTAATCTGGACGTGAGCTTGACTCGAAGTCGATGATACTCAAGAATGTCTTCTTCTCGTGGTCGACATTTCAATTCGGACGAGGCCGGTGGAAACTCGGCCATGGAGTTGAACGATCGCCGGCGGCTTCAGGAAGAAGAAGATGATGATCCGTTTCTTAAATTTATCGATTATGCGAGGTCTGTGCTAGCATTTGAAGACGAAGAAGACTTCGATCCTAATGTTAAAGGAACGGAGACCTATACGCCGGGTTGGAGTTGGATCGCCTCTCGGGTCCTCAGAACTTGTATCGCCTACTCCAGTTCTGTTACCCCTGCGATTTTGCTATCCGAGCTCTCGCAGGTACTGTGAATTCAAACTTCATTAAGGTTAATTATTTCGATTGTAGGGAAACTTTGAACAATCAAATGAAGAAGTGTTATTAATTGCCTGACTTTCCTATCTAAGGTAACTGCAAAGTGAGGACTACCTAAAATGTTGAATGTTACACAATTAGACTAAAGATTCCACGAGTTTAATGGAAGTTCTTGGTTACTAGTTTGAATTTGTAGCAGTAGGCCACCCGAGTTCCTTTTTATTTTATACACCCACTTATTAACAATTCATTCGTAGCGGGGAGAAGAAGAGCCCATGCTCTAAATGAGGGATGAATACTCGATGTTCATGGCTTGCTTCTAGGTTTTTGAAGTCAATCTCTCCTTAAGATTTCTTGATCCAATTGTGGTTCTATTGGTTTTCTGAAGTATTAGGCATCGCATATGGGCCAACCTCGAGTGATCTAGATTGCACCCTTACCCCATACAGCTTTTTAGTGTCCTCCCAATGTTCCTTTCAATTCAGTATCTCATCAGCTGAAAGGCTATTTCAACAGTCAATTACGCAATTATCCAAGTGAGAAATGTTTGGTTCCGTCCCAAGCTTCATAGTATAGATTGGAAACAAGAAATCCACGGGTGATGAAGGCATACGTTTCTTCTCTAGGTGGAAAATGCATTCTGGACTTCCTTATCCCTCCTGTCCAGTGCCCCTAAATTGTAACTCGTTAGCTTAGGAAGAATACATTGTTTTCCATAGCATAAAATTGTTTACGCTAATGTAACCTGATTCACGAGGTTTCCTTGTGGTGGGAGTTGGTATAACCCCTGAAATTTTGATAAGAGATGGTATGGAAAAAAAGTGGTTTAGTTGAGGTAAAACATGGTGCATAACGTGGTATCTTGGAGAGAGCTAATAAGCTGAATGATTGGTAAAAACCAGGCAAAGTTATCTATACCCTTGAACAACTACACCTAACCCTTATGGTAAGGGGTCAAAGTTTGTGCCTGATTTAGATGGAGAAGACAAAGTACAGTAGTTGATAGATATTGTGCAACTTGAGTAAGTCTGAAAAAGAACAGTAACTAAATGGTTTATATAAACAATGATTAGTTTCACTTCTGATGTTTCTTAAAAAAAAAAAAAAATACCGGTTCCACTTCTTGTTACCAACTAAGATGATATAAATTAACCTTTCACAGTTCTATTCTACAAGATAGTTATTTGGGTAGTGATTTTTGTTTTGAAGGCCTGGTCTGAGCAACACAGAATTGGGGCTCCCAAGAAAATACCTGAATGTATTAATCAGTTGAAGAAGAAGAATAGAAGAAAGAAGCTCCCGAAAACAGTTACTATTGACTCCATATATGAGAAGAATTTCCTATCTTTAAGCAGCGTTTTGGAAGCTGTTATTGTTGAAGAATTTATTCTTCCAGGTACTTCTATCTCCCATTTTAAGCTGATGATTGTAATTTTAGCAATGTTCTTGTTGCTCTTCCAAATCAATTATACATGACTAAAATGCTAATATATTTGTAGCTTGAGGAAAGGGTTTCTGAAACTGAAACACACATATTCATAGTACTAGTTAATTTACTCAATAATATATAGATATATCTTTCTTTGGGACGACCTTCGTTTGTTTGTTTGTTTTTTTTTTATAATTTTTTTGGAACTACTTAAGTTCAGGTGTTGTTTCCCTAGTTCGACTGTTTAGATGTCATTATACAAACAAGGATCTGAATCTTTTATCAACATGATTTTCTTAAGGTACAAATATACACATGCTTACTTTGGGGGATTTTTGGAGCTCTAATACGATTGATCTCTATCTCCATTGTAGGTAATACTGCTACCCTTCAGATCTATTTATCATGCAATAAAAACCATGTGGAATGAATGTATTCTGAATGGCCATTTGTTTGCTTAATTAGAAGATCCTTTCAGTGGTATTACTGCACTGCACTCTTTTTGTGCCACATTAGTTTGAACAAACCAGCTTGCATTTGAAAAATGAACACAAAAAATCCACCAAAGAAAAATGAAGGCCAGCTAAAAGTGAGGAACACAAGAAAATGTTTATTAAAGAGAAACTGTAGTATGAACCCCAAAAAAAAAAAAAAACGTTAACATGCACAAAACCCCACATCTCCTCCTACAAGTTATCTAACCCCATGAAAGTTATTGGTTTCTTTCCACCCAAATATGCCATAAATGATGAACAAAATTAGCTTGCCAAAGCAAATTACCTTTCTCCTTGAACAAAGAATTCAAAATGACCTCATCGTCCATTGAATGCGTGACCTCTGAATAACAAAAATATCAGATGTCTGCTACATACAACCCATGACTCAAAAGCAGGTGGGTATAGTCACAGTAAGCGATTAAGATCTTTTGCATTGCACTTGTACCCGACACGCCAATTCAAACCAAGGACAAGAGGAGAGGCTTTCATGCTGAGATATAAGATGTTGATTCTCTCCTGAGCCACAAACCAATAATTTATCTTTTTCTTGAAGGTATAAGATGAAACCAACTGAATGTACCAAGACAAGCTATTGCAGATACTTGAAGGATCAGTAGACCAATAGACCACACTCATGAATTGGTACATTTGAATAGAAATTGATTGATTGGATCAAAGAAAGGAGAGAGACTAACTCGTCTATTGGTACATTTGAAGGATCAATGGACCACACTCAACAATTGGTACATTGAATAAAAATTGATTGATTGGTTTGAATAGTAAGTTTTTTAGAACTCAAGGATACAGTTGAACAACTCATAGAACAAATCCTTATTTAACTAAGGTTGTGAATCCAATGATACAGTTGCTGGATATGAATGCTTGATTTTGTATTGCATATTGACATTAAAGCATGCCCGAATCACTTCATTTTTTTTTAATTAATTAATTAATTTATTTATTTTTAGTTTTTATCCCTAAATATCGACTTCCATTTCCATAGTTTCATCTTGATTTGAGGTTTTGTTACGACTCTACAACTGCACAGAACTTGCTATCTTCATATTTCATGGAAGAACAAGTAAAACATGAATCTTTGATGGCAGATTCTATGACTTAGTTGGTGGAATTTTGAAAAAAGGGAGGCAAATATTTTTAACTGGATGCTATCTTCGTGCTGCCAGTGGCGGATCCGGTCATCCACGACTTCTACCAACTGAATACCTTATCATATTGTTAGATGAGGTTGTCAAAATGGCTTTTCTAGCTACCAGAATCAATATTATAATTTTTTTTTTTTTTTTTTGCATATGCACAGTGACTATCTTCTATTTATTATAGGAAGAGGATGATGATGTAATACTTCTAGGAGCTCAATTTTGTTCCGATTCCTTTTCTTCTGTTTCTCTTGACGCCGTCAATAAAGGGACTACATATTCATTATATGCAAGGCAAGATATACAACTTTTTCTCCAGTTTTATCCATCTCCATCTAAACTGGTTTCTTATCCTGCAATGAGCTAGAGGCTGAATTGACCAAATAAATCAGTTTTCACAGAGGGTGGATTTGTCCAATAATGAACTAAATAATGGTTGTCTTATATTCAATATTTTCAGGATTGAGTCTATTGGTCCAATAGAAATTCATGAGAAGACTAACGGCTTACAGATGATACAAATTAGTCTTCTTGATAATGATGGTTTCAAGCTAAAGTTTCTCTTATGGGGTGAACAGGTGATACTAGCCAATCTTCTAAGGTGAGTCTTTTAAGTTGATATTAGTTATTCAGGAATATTCTTATATGATTATATCAACATAACAGTTCCCATTTCAACAGTGTTGGTAGCTTGCTTGCCCTTGATAGACCATATATTGCTACTGTAAACGAGAATGGCCTTGGAACAAGTGATGAGCTTTGTCTTGAATATGGTAGTGCAACACAGTTATATTTGGTGCCTTGCATTCAGCATGAGGAGCAAGTGTGTTGTAGATTCCCACCTTTTCTACACTGCACACACACACACAAACTTAAAAACACTTTCTATTTCTTGAATCTCATTAATATATAAATATTTTACTACACAGGTATGTGTTTTAACACAGAATATAAGCCAAGCTTCAAGGACGCTTGGTACATCATATCCTACTCAGGATCCCCGAGTTTCTCAAGTTTCCTTGCCGTGCGATTCACATGGGACAATTGATTTTGGTAATTATCCTTTTCGGGTGAGTTTAACTTCTAATCATAATCTTAATGTATGGATGGCATTTGTGTTCTTTTTCTTGAATAAGTAGTAGTTACAACGGACAAATGACATTTATAATGTCTCTTGCAACCCCATTATTCCATGTACAGTTTCATACACCTGTGGAATTTATACCTGACTCTGGTTATATCATAAATTGATTCAGAATGGTCCACGCATTTAGCTCCTGTCAGTTTTTTGTAATCCTTCTGTAGTATAAAGTTCATAATTATCTGATTTTACAAGATGCAAAAGGTAAAAGCCAATTTATGCCTTACAAAATTCTGATGTTAAAATTCTGAGAAATTCACTTGACATATTATAGATGACAGGTCTAATTGCTACAGTATTAATCTTCAGATCCCATATCACCAAGCATTTATTTTTTCTTTGTTTGCCAAACAACTAATTGCAATTACTTGAATTGTGATTCTGTAAAAAATTTCTTTCATTCTGAAGTCTGTCTCATTTACTTTACGGAGATGAATCTTAATTTTTCATGCTATTTGTGAAGTTTACAGTCTTTTGTGGTCGACCTTCAAGACAAGATGACTGGCATTAGCTTATATGGTATCATTATAGATATAGTAAATGAAAGAAATACCACAGAAGCTGTTTTCTCTATGAGAATTGAAGATAACACCGGACAAATTTCGGCAAAGTTGCATTTCGTGAGATCTTGGTATGGACATTTTCGTTGCCTAACTTCTAATTTCTGAGTTTTATGAGTCTGGATTTTGCATGGCTCTTCAAATAACAAAAACTTCTCATCTCATACTTCTACTCATTTTCTGAGTTCCTCTTTCATTTTTCCTTTTTTTATTCCCCTTCTTGTAAAAGGTCGCTGGGAAGGGTAGGCGTTGGACATACAGTATATATCAGTGGCCTGACATGCACCATAAAGAAGAATAAGTGAGCTAATTCAAACTCTTTATCCAGTTATCTAGTAAATAAATTGGAAGTATTGGATCATTTGAAATGTTTCCAGAAATAAATAATTTGCCTTCGATTTGAGGTTTCTCTCCTTGTAAAAATTTTGGTGATTTATTCATGGCATTTCTAATTTGATTTGATTTCTTTTCTTTTGAAGCTTGGAGGCTTTATGGATTGAGAATCATGTTGGAGCTTCTTTTGTCAACCTTAGCTGCTTGCCAGCATTGTTAACCTCATCTTGTCTTCATAAAATTTCACGACTTTCTGATCTTACCAGCAACTCTCATGGTACAAAGGTAAAGTTTTTTCTTTTCCTTCTCCTTTTTCGGACTATATTATGTTATGTTTGATAAGAAACTTTCTGTAAGAAAATGGAAGAGATAACCTAGAGGCTGAGGGAAGAGGGAGAAAGGTCCTTGTTGAAGAACCTCTACACACACAAAAAATAGGTGCCCTGATATTGAGTTTCAAGAAGAAGACTGATAACAAATATCTTGAACGGGGCATTTCAGTTTGTCATAAATAATTCAAGAACACAATATATATATATTTTTCTTCAACGTTAAGGGGTTGGATTTCTATCCATCCATCAGGACCGCAAGGGAGCTCTCATCGTACATTTCCATGAAACCGTAGCTGTCTCGATAAGCTACCGGGCTGAAAGGATTTCTCGGAGCCATTCATCTATATCCTTGGAGAACAAGTGAAGCAAATCTCCTGCAAAATAAACTCCATACCTCTGTTGCTTAGGATCAGCCAATTAGGAGTTCCTCATTCTTATAACATAATACATGAGCAACAAACCTTAGGAGAGGGAGCTGAATGATCAATGAGGTTTCTCTTTTTGCAACCTTTGTAGAGTGATTAGGGAAATTTTTGTTCTTCGTTCGCACCTAGCCTCACAGCTATGCTTCCAAAATCGAATCTCGAAAAATACATTCAAAGTTTGGAATTTTCTTCCCTCGTTTTTCTAATATCTCACCTCTATCAGCTGTGATTTTTATTTTGTTTCTCCAAATCTCCTTGACAGGTGTGTCGAGTTCGGCTTGACCAAGTTTCACATTGTCATGTTAGTACGAAATTTTTGCATGCAAATTGTGGTCATTTTGTTGAGGAGACACCCGGCAGAACTGAGTGCAGCTTCTGTCGTTGTGAATGCAAGTCCGAGCTGGTTCGTACATTCGACCTGAAAATCACCCTTGCAGATGATACTGCAAAAATCTTTGCTTGCTGTACAGGTCAAACTGCTGCAGAGTTGTTGCAAATATCTCCTGATGAATTCTGTGAACTACCGGAGGTAAAGACTGAACTTAAAATAATGCTTTAAAGAAAAAAAGCTTATGCTTCAAAACCACCAGTACAGGTGAAAATAGCTTTTGTTTAATAACAAAGAATAAGTTGCTAGTATAGTTCTCTAAAGCTGCCAAAAAAGATGCTTACGGCCGCTCTATGCCACATGATAATGACATTCCGACCTTTATCACAACGATATTCTTTGACTTCGACCTCATTGCTATTTATGTTTAGATTTGAGTTTTTTTCTTTCTGAAAGGTGGTATAGTAATTCGATTGAAGAGTAATGATCATATGTTTCAAATTATTATCATGCATACATGATGACCTGATCATGAGAATCATTATTTAATCTGAATTCTTATGTTTAGTCAGATTCATCCACTGCCCGTATTCCTAAAAGTTGGTTCTAACTTTGTAGGAAGAACAAGTAATGTATCCATCATCACTCGAGAACGAAAGTTTTGTGGTTGCAATAGTGAATTGCAGGAGGCAAACTAGCAAATGTGGAGATAACGTCTATTCTGTTAATGATCCACTTTCGTGGGAGATTACTCGTGCACTGAAGTGTGAATGATATTGCCTCATCTTTCTAACCGTGGCTGTTGCAGGAGGTCAAGTTGTTCATTTCAATGTGTTAGATTTCACCGTTTAGAGGTTTAAAGAGGTTCGAATAACTTACGTGGACATGTTGAACTCAAAAAATTAGCCAACTCGTCGAGTTCACCAGAGTGAGGAGTCCATATTATTATAAAGGTACCACATTTCTAGTCTCACTATTTTGAATTTGGCAATGTTTTGGTCTCTTAGGCTACTATGTTCTTTGTTTTGTATTTGTAATGATTTAGTTTT

mRNA sequence

TGGCGTCAGTGTAGGCATAGGAAAACCGCGCAAATTTGGCAATCATCTTCCCGCTGAAAATGAACCTCAAATATAGGGCGTAGAAATGGCTTAATCTGGACGTGAGCTTGACTCGAAGTCGATGATACTCAAGAATGTCTTCTTCTCGTGGTCGACATTTCAATTCGGACGAGGCCGGTGGAAACTCGGCCATGGAGTTGAACGATCGCCGGCGGCTTCAGGAAGAAGAAGATGATGATCCGTTTCTTAAATTTATCGATTATGCGAGGTCTGTGCTAGCATTTGAAGACGAAGAAGACTTCGATCCTAATGTTAAAGGAACGGAGACCTATACGCCGGGTTGGAGTTGGATCGCCTCTCGGGTCCTCAGAACTTGTATCGCCTACTCCAGTTCTGTTACCCCTGCGATTTTGCTATCCGAGCTCTCGCAGGCCTGGTCTGAGCAACACAGAATTGGGGCTCCCAAGAAAATACCTGAATGTATTAATCAGTTGAAGAAGAAGAATAGAAGAAAGAAGCTCCCGAAAACAGTTACTATTGACTCCATATATGAGAAGAATTTCCTATCTTTAAGCAGCGTTTTGGAAGCTGTTATTGTTGAAGAATTTATTCTTCCAGGTACAAATATACACATGCTTACTTTGGGGGATTTTTGGAGCTCTAATACGATTGATCTCTATCTCCATTGTAGATTCTATGACTTAGTTGGTGGAATTTTGAAAAAAGGGAGGCAAATATTTTTAACTGGATGCTATCTTCGTGCTGCCAGTGGCGGATCCGGTCATCCACGACTTCTACCAACTGAATACCTTATCATATTGTTAGATGAGGAAGAGGATGATGATGTAATACTTCTAGGAGCTCAATTTTGTTCCGATTCCTTTTCTTCTGTTTCTCTTGACGCCGTCAATAAAGGGACTACATATTCATTATATGCAAGGCAAGATATACAACTTTTTCTCCAGATTGAGTCTATTGGTCCAATAGAAATTCATGAGAAGACTAACGGCTTACAGATGATACAAATTAGTCTTCTTGATAATGATGGTTTCAAGCTAAAGTTTCTCTTATGGGGTGAACAGGTGATACTAGCCAATCTTCTAAGTGTTGGTAGCTTGCTTGCCCTTGATAGACCATATATTGCTACTGTAAACGAGAATGGCCTTGGAACAAGTGATGAGCTTTGTCTTGAATATGGTAGTGCAACACAGTTATATTTGGTGCCTTGCATTCAGCATGAGGAGCAAGTATGTGTTTTAACACAGAATATAAGCCAAGCTTCAAGGACGCTTGGTACATCATATCCTACTCAGGATCCCCGAGTTTCTCAAGTTTCCTTGCCGTGCGATTCACATGGGACAATTGATTTTGGTAATTATCCTTTTCGGTCTTTTGTGGTCGACCTTCAAGACAAGATGACTGGCATTAGCTTATATGGTATCATTATAGATATAGTAAATGAAAGAAATACCACAGAAGCTGTTTTCTCTATGAGAATTGAAGATAACACCGGACAAATTTCGGCAAAGTTGCATTTCGTGAGATCTTGGTCGCTGGGAAGGGTAGGCGTTGGACATACAGTATATATCAGTGGCCTGACATGCACCATAAAGAAGAATAACTTGGAGGCTTTATGGATTGAGAATCATGTTGGAGCTTCTTTTGTCAACCTTAGCTGCTTGCCAGCATTGTTAACCTCATCTTGTCTTCATAAAATTTCACGACTTTCTGATCTTACCAGCAACTCTCATGGTACAAAGGTGTGTCGAGTTCGGCTTGACCAAGTTTCACATTGTCATGTTAGTACGAAATTTTTGCATGCAAATTGTGGTCATTTTGTTGAGGAGACACCCGGCAGAACTGAGTGCAGCTTCTGTCGTTGTGAATGCAAGTCCGAGCTGGTTCGTACATTCGACCTGAAAATCACCCTTGCAGATGATACTGCAAAAATCTTTGCTTGCTGTACAGGTCAAACTGCTGCAGAGTTGTTGCAAATATCTCCTGATGAATTCTGTGAACTACCGGAGGAAGAACAAGTAATGTATCCATCATCACTCGAGAACGAAAGTTTTGTGGTTGCAATAGTGAATTGCAGGAGGCAAACTAGCAAATGTGGAGATAACGTCTATTCTGTTAATGATCCACTTTCGTGGGAGATTACTCGTGCACTGAAGTGTGAATGATATTGCCTCATCTTTCTAACCGTGGCTGTTGCAGGAGGTCAAGTTGTTCATTTCAATGTGTTAGATTTCACCGTTTAGAGGTTTAAAGAGGTTCGAATAACTTACGTGGACATGTTGAACTCAAAAAATTAGCCAACTCGTCGAGTTCACCAGAGTGAGGAGTCCATATTATTATAAAGGTACCACATTTCTAGTCTCACTATTTTGAATTTGGCAATGTTTTGGTCTCTTAGGCTACTATGTTCTTTGTTTTGTATTTGTAATGATTTAGTTTT

Coding sequence (CDS)

ATGTCTTCTTCTCGTGGTCGACATTTCAATTCGGACGAGGCCGGTGGAAACTCGGCCATGGAGTTGAACGATCGCCGGCGGCTTCAGGAAGAAGAAGATGATGATCCGTTTCTTAAATTTATCGATTATGCGAGGTCTGTGCTAGCATTTGAAGACGAAGAAGACTTCGATCCTAATGTTAAAGGAACGGAGACCTATACGCCGGGTTGGAGTTGGATCGCCTCTCGGGTCCTCAGAACTTGTATCGCCTACTCCAGTTCTGTTACCCCTGCGATTTTGCTATCCGAGCTCTCGCAGGCCTGGTCTGAGCAACACAGAATTGGGGCTCCCAAGAAAATACCTGAATGTATTAATCAGTTGAAGAAGAAGAATAGAAGAAAGAAGCTCCCGAAAACAGTTACTATTGACTCCATATATGAGAAGAATTTCCTATCTTTAAGCAGCGTTTTGGAAGCTGTTATTGTTGAAGAATTTATTCTTCCAGGTACAAATATACACATGCTTACTTTGGGGGATTTTTGGAGCTCTAATACGATTGATCTCTATCTCCATTGTAGATTCTATGACTTAGTTGGTGGAATTTTGAAAAAAGGGAGGCAAATATTTTTAACTGGATGCTATCTTCGTGCTGCCAGTGGCGGATCCGGTCATCCACGACTTCTACCAACTGAATACCTTATCATATTGTTAGATGAGGAAGAGGATGATGATGTAATACTTCTAGGAGCTCAATTTTGTTCCGATTCCTTTTCTTCTGTTTCTCTTGACGCCGTCAATAAAGGGACTACATATTCATTATATGCAAGGCAAGATATACAACTTTTTCTCCAGATTGAGTCTATTGGTCCAATAGAAATTCATGAGAAGACTAACGGCTTACAGATGATACAAATTAGTCTTCTTGATAATGATGGTTTCAAGCTAAAGTTTCTCTTATGGGGTGAACAGGTGATACTAGCCAATCTTCTAAGTGTTGGTAGCTTGCTTGCCCTTGATAGACCATATATTGCTACTGTAAACGAGAATGGCCTTGGAACAAGTGATGAGCTTTGTCTTGAATATGGTAGTGCAACACAGTTATATTTGGTGCCTTGCATTCAGCATGAGGAGCAAGTATGTGTTTTAACACAGAATATAAGCCAAGCTTCAAGGACGCTTGGTACATCATATCCTACTCAGGATCCCCGAGTTTCTCAAGTTTCCTTGCCGTGCGATTCACATGGGACAATTGATTTTGGTAATTATCCTTTTCGGTCTTTTGTGGTCGACCTTCAAGACAAGATGACTGGCATTAGCTTATATGGTATCATTATAGATATAGTAAATGAAAGAAATACCACAGAAGCTGTTTTCTCTATGAGAATTGAAGATAACACCGGACAAATTTCGGCAAAGTTGCATTTCGTGAGATCTTGGTCGCTGGGAAGGGTAGGCGTTGGACATACAGTATATATCAGTGGCCTGACATGCACCATAAAGAAGAATAACTTGGAGGCTTTATGGATTGAGAATCATGTTGGAGCTTCTTTTGTCAACCTTAGCTGCTTGCCAGCATTGTTAACCTCATCTTGTCTTCATAAAATTTCACGACTTTCTGATCTTACCAGCAACTCTCATGGTACAAAGGTGTGTCGAGTTCGGCTTGACCAAGTTTCACATTGTCATGTTAGTACGAAATTTTTGCATGCAAATTGTGGTCATTTTGTTGAGGAGACACCCGGCAGAACTGAGTGCAGCTTCTGTCGTTGTGAATGCAAGTCCGAGCTGGTTCGTACATTCGACCTGAAAATCACCCTTGCAGATGATACTGCAAAAATCTTTGCTTGCTGTACAGGTCAAACTGCTGCAGAGTTGTTGCAAATATCTCCTGATGAATTCTGTGAACTACCGGAGGAAGAACAAGTAATGTATCCATCATCACTCGAGAACGAAAGTTTTGTGGTTGCAATAGTGAATTGCAGGAGGCAAACTAGCAAATGTGGAGATAACGTCTATTCTGTTAATGATCCACTTTCGTGGGAGATTACTCGTGCACTGAAGTGTGAATGA

Protein sequence

MSSSRGRHFNSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKGTETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLYLHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLGAQFCSDSFSSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLDNDGFKLKFLLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYLVPCIQHEEQVCVLTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVVDLQDKMTGISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHTVYISGLTCTIKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSNSHGTKVCRVRLDQVSHCHVSTKFLHANCGHFVEETPGRTECSFCRCECKSELVRTFDLKITLADDTAKIFACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQTSKCGDNVYSVNDPLSWEITRALKCE

Homology

[Close]

BLAST of Cp4.1LG08g05180 vs. TrEMBL
Match: A0A0A0L5D2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G166300 PE=4 SV=1)

HSP 1 Score: 1201.4 bits (3107), Expect = 0.0e+00
Identity = 589/680 (86.62%), Postives = 636/680 (93.53%), Query Frame = 1


Query: 3   SSRGRHFNSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKG 62
           SS  +HFNS +A  NSAMEL+D ++LQEE DDDPFLKF+DYARSVLAFED+EDFDPN+ G
Sbjct: 2   SSHSKHFNSHDAARNSAMELDDPQKLQEEGDDDPFLKFVDYARSVLAFEDDEDFDPNING 61

Query: 63  TETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKK 122
           TET+TPGW+WIASRVLRTC+AYSSSVTPAILLSELSQAW EQHR+GAPKKIPECINQLKK
Sbjct: 62  TETHTPGWTWIASRVLRTCMAYSSSVTPAILLSELSQAWYEQHRVGAPKKIPECINQLKK 121

Query: 123 KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLY 182
           KNRRKKLPKTVTIDSIYEKNFL+LSSVLEAVI++EFILPGTNIHMLTLGDFWSSNTIDLY
Sbjct: 122 KNRRKKLPKTVTIDSIYEKNFLALSSVLEAVILDEFILPGTNIHMLTLGDFWSSNTIDLY 181

Query: 183 LHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLG 242
           LH RFYDLV GILKKGRQIF+TGCYLRAASGGSG+PRLLPTEYLIILLDEEEDDDV+LLG
Sbjct: 182 LHRRFYDLVNGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLIILLDEEEDDDVMLLG 241

Query: 243 AQFCSDSFSSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLD 302
           AQFCSD+FSSVSLD+VN+GTTYSLYAR        IESIGP+EIHE  NGL+MIQI L+D
Sbjct: 242 AQFCSDTFSSVSLDSVNEGTTYSLYAR--------IESIGPLEIHEMMNGLRMIQIILVD 301

Query: 303 NDGFKLKFLLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYL 362
           NDGFKLKFLLWGEQV+LANLLSVGS+LALDRPY+ATVNENG+GTSDELCLEYGSATQLYL
Sbjct: 302 NDGFKLKFLLWGEQVLLANLLSVGSVLALDRPYVATVNENGVGTSDELCLEYGSATQLYL 361

Query: 363 VPCIQHEEQVCVLTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVV 422
           VPCIQHEEQVCVLTQNI+QASRT+  SYPTQ P+VSQVSLPCDSHG IDFGNYPFRSFV+
Sbjct: 362 VPCIQHEEQVCVLTQNINQASRTVSMSYPTQSPQVSQVSLPCDSHGAIDFGNYPFRSFVI 421

Query: 423 DLQDKMTGISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHT 482
           DLQDKMTGISLYG ++DI NERNTTEA FSMRIEDNTG++ AKL FVRSWSLGRV VGHT
Sbjct: 422 DLQDKMTGISLYGNVLDIANERNTTEAGFSMRIEDNTGEVLAKLRFVRSWSLGRVSVGHT 481

Query: 483 VYISGLTCTIKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSNSHGTK 542
           V+ISGLTCT  KN LEALWIENHVGASFVNLSCLPALLTSSCLHK+SRLSDLTSN+HGTK
Sbjct: 482 VFISGLTCTKNKNRLEALWIENHVGASFVNLSCLPALLTSSCLHKLSRLSDLTSNTHGTK 541

Query: 543 VCRVRLDQVSHCHVSTKFLHANCGHFVEETPGRTECSFCRCECKSELVRTFDLKITLADD 602
           VC+VRLDQVSHCHVSTKFLHA CGHFVEETP R ECSFCRCECKSEL+RTFDLKITLADD
Sbjct: 542 VCQVRLDQVSHCHVSTKFLHAICGHFVEETPARIECSFCRCECKSELMRTFDLKITLADD 601

Query: 603 TAKIFACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQTSKCGD 662
           +AKIFA CTGQTAAELLQISPDEFCELPEEEQVMYPSSLENE+FVVAIVNCRR++S  G+
Sbjct: 602 SAKIFAWCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENENFVVAIVNCRRRSSTYGN 661

Query: 663 NVYSVNDPLSWEITRALKCE 683
           N+   NDPLSWEITRALKCE
Sbjct: 662 NLNFANDPLSWEITRALKCE 673

[Close]

BLAST of Cp4.1LG08g05180 vs. TrEMBL
Match: A0A061EQT8_THECC (Nucleic acid-binding proteins superfamily isoform 1 OS=Theobroma cacao GN=TCM_021358 PE=4 SV=1)

HSP 1 Score: 884.4 bits (2284), Expect = 8.8e-254
Identity = 455/675 (67.41%), Postives = 528/675 (78.22%), Query Frame = 1


Query: 14  AGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKGTETYTPGWSWI 73
           + G S ME+++ ++ +EEE++DPFL FIDYARSVL+   +ED DP+        PGWSW 
Sbjct: 4   SNGASLMEIDNDQKQEEEEEEDPFLAFIDYARSVLS--PDEDDDPSGNEAGNSGPGWSWT 63

Query: 74  ASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKKKNRRKKLPKTV 133
            SR+L+TCI+YSS VT AILLS+LSQAWSEQ R GAPK+ PE INQLK+K+RR KLP  V
Sbjct: 64  VSRILKTCISYSSGVTAAILLSDLSQAWSEQRRAGAPKRRPEIINQLKRKHRRTKLPNMV 123

Query: 134 TIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLYLHCRFYDLV-- 193
           TIDSIYEKNFLSL SVLEAVIV+ F+LPGTNI+MLTL D+WSS TIDLYLH R+YDLV  
Sbjct: 124 TIDSIYEKNFLSLGSVLEAVIVDAFVLPGTNIYMLTLRDYWSSKTIDLYLHRRYYDLVDS 183

Query: 194 -GGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLGAQFCSDSF 253
             GILKK R++F+TGCYLR A  GSG PRLLPTEYL+ILLDE+ DDD IL+GAQFCSDSF
Sbjct: 184 PNGILKKEREVFVTGCYLRTAREGSGSPRLLPTEYLVILLDEDLDDDAILIGAQFCSDSF 243

Query: 254 SSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLDNDGFKLKF 313
           SS+SLDAV    +YSLYAR        IESI  +EI  K   LQ  QI+L+DNDG KLKF
Sbjct: 244 SSISLDAVKNDVSYSLYAR--------IESIRSLEILGKCGSLQRKQITLVDNDGVKLKF 303

Query: 314 LLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYLVPCIQHEE 373
           LLW EQVILANL SVGS+LALDRPYIA+  ++ + TSDELCLEYG+ATQLYLVP + HEE
Sbjct: 304 LLWNEQVILANLFSVGSMLALDRPYIASSADSAVETSDELCLEYGTATQLYLVPFVHHEE 363

Query: 374 QVCV-LTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVVDLQDKMT 433
           QVC+  TQN +Q SR   T  PTQ PRVSQV LPCDS G+IDF NYPF+SFV DL+DKMT
Sbjct: 364 QVCLSSTQNCNQGSRLHATVDPTQGPRVSQVILPCDSQGSIDFSNYPFQSFVADLRDKMT 423

Query: 434 GISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHTVYISGLT 493
           GISLYG++ DI  ER T E +FS++IED TG I AKLHF +SWSLGRV  GH VYISGLT
Sbjct: 424 GISLYGVVTDIFRERKTAEVIFSLKIEDVTGAIWAKLHFSQSWSLGRVSHGHMVYISGLT 483

Query: 494 CT-IKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSNSHGTKVCRVRL 553
           C+  K+N  E  W E  VGASF+NLSCLPALL SSCLHK+SRLSDL+S      +CRV +
Sbjct: 484 CSKTKQNCFEVSWFEKDVGASFINLSCLPALLNSSCLHKLSRLSDLSSKRSSMHICRVWV 543

Query: 554 DQVSHCHVSTKFLHANCGHFVEETP-GRTECSFCRCECKSELVRTFDLKITLADDTAKIF 613
           DQV H HV+T+F HA+CGHFV+  P G  +CSFC C C +ELVR F LKITLAD+TAKIF
Sbjct: 544 DQVDHYHVTTRFSHASCGHFVKGMPSGVVKCSFCHCNCDAELVRVFYLKITLADETAKIF 603

Query: 614 ACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQTSKCGDNVYSV 673
           A CTGQTA ELLQISPDEFCELPE+EQVMYPSSLENE F VA+VNC+RQ     D++   
Sbjct: 604 AWCTGQTAMELLQISPDEFCELPEDEQVMYPSSLENERFKVALVNCKRQGYGASDSLTPE 663

Query: 674 NDPLSWEITRALKCE 683
            D +SWEITRALK E
Sbjct: 664 ADAVSWEITRALKYE 668

[Close]

BLAST of Cp4.1LG08g05180 vs. TrEMBL
Match: A0A061EQ03_THECC (Nucleic acid-binding proteins superfamily, putative isoform 2 OS=Theobroma cacao GN=TCM_021358 PE=4 SV=1)

HSP 1 Score: 878.2 bits (2268), Expect = 6.3e-252
Identity = 456/681 (66.96%), Postives = 528/681 (77.53%), Query Frame = 1


Query: 14  AGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKGTETYTPGWSWI 73
           + G S ME+++ ++ +EEE++DPFL FIDYARSVL+   +ED DP+        PGWSW 
Sbjct: 4   SNGASLMEIDNDQKQEEEEEEDPFLAFIDYARSVLS--PDEDDDPSGNEAGNSGPGWSWT 63

Query: 74  ASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKKKNRRKKLPKTV 133
            SR+L+TCI+YSS VT AILLS+LSQAWSEQ R GAPK+ PE INQLK+K+RR KLP  V
Sbjct: 64  VSRILKTCISYSSGVTAAILLSDLSQAWSEQRRAGAPKRRPEIINQLKRKHRRTKLPNMV 123

Query: 134 TIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLYLHCRFYDLV-- 193
           TIDSIYEKNFLSL SVLEAVIV+ F+LPGTNI+MLTL D+WSS TIDLYLH R+YDLV  
Sbjct: 124 TIDSIYEKNFLSLGSVLEAVIVDAFVLPGTNIYMLTLRDYWSSKTIDLYLHRRYYDLVDS 183

Query: 194 -GGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLGAQFCSDSF 253
             GILKK R++F+TGCYLR A  GSG PRLLPTEYL+ILLDE+ DDD IL+GAQFCSDSF
Sbjct: 184 PNGILKKEREVFVTGCYLRTAREGSGSPRLLPTEYLVILLDEDLDDDAILIGAQFCSDSF 243

Query: 254 SSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLDNDGFKLKF 313
           SS+SLDAV    +YSLYAR        IESI  +EI  K   LQ  QI+L+DNDG KLKF
Sbjct: 244 SSISLDAVKNDVSYSLYAR--------IESIRSLEILGKCGSLQRKQITLVDNDGVKLKF 303

Query: 314 LLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYLVPCIQHEE 373
           LLW EQVILANL SVGS+LALDRPYIA+  ++ + TSDELCLEYG+ATQLYLVP + HEE
Sbjct: 304 LLWNEQVILANLFSVGSMLALDRPYIASSADSAVETSDELCLEYGTATQLYLVPFVHHEE 363

Query: 374 QVCV-LTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVVDLQDKMT 433
           QVC+  TQN +Q SR   T  PTQ PRVSQV LPCDS G+IDF NYPF+SFV DL+DKMT
Sbjct: 364 QVCLSSTQNCNQGSRLHATVDPTQGPRVSQVILPCDSQGSIDFSNYPFQSFVADLRDKMT 423

Query: 434 GISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHTVYISGLT 493
           GISLYG++ DI  ER T E +FS++IED TG I AKLHF +SWSLGRV  GH VYISGLT
Sbjct: 424 GISLYGVVTDIFRERKTAEVIFSLKIEDVTGAIWAKLHFSQSWSLGRVSHGHMVYISGLT 483

Query: 494 CT-IKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSNSHGTKV----- 553
           C+  K+N  E  W E  VGASF+NLSCLPALL SSCLHK+SRLSDL+S      V     
Sbjct: 484 CSKTKQNCFEVSWFEKDVGASFINLSCLPALLNSSCLHKLSRLSDLSSKRSSMHVWIADD 543

Query: 554 -CRVRLDQVSHCHVSTKFLHANCGHFVEETP-GRTECSFCRCECKSELVRTFDLKITLAD 613
            CRV +DQV H HV+T+F HA+CGHFV+  P G  +CSFC C C +ELVR F LKITLAD
Sbjct: 544 ICRVWVDQVDHYHVTTRFSHASCGHFVKGMPSGVVKCSFCHCNCDAELVRVFYLKITLAD 603

Query: 614 DTAKIFACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQTSKCG 673
           +TAKIFA CTGQTA ELLQISPDEFCELPE+EQVMYPSSLENE F VA+VNC+RQ     
Sbjct: 604 ETAKIFAWCTGQTAMELLQISPDEFCELPEDEQVMYPSSLENERFKVALVNCKRQGYGAS 663

Query: 674 DNVYSVNDPLSWEITRALKCE 683
           D++    D +SWEITRALK E
Sbjct: 664 DSLTPEADAVSWEITRALKYE 674

[Close]

BLAST of Cp4.1LG08g05180 vs. TrEMBL
Match: A0A0B0PQ72_GOSAR (cGMP-specific 3',5'-cyclic phosphodiesterase OS=Gossypium arboreum GN=F383_03938 PE=4 SV=1)

HSP 1 Score: 861.3 bits (2224), Expect = 7.9e-247
Identity = 442/680 (65.00%), Postives = 526/680 (77.35%), Query Frame = 1


Query: 14  AGGNSAMELNDRRRLQ---EEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKGTETYTPGW 73
           + G S ME ++ ++ +   E+E++DPFL FI+YARSV++ E++ED   N +G      GW
Sbjct: 4   SNGGSLMETDNHKKREGEGEDEEEDPFLAFIEYARSVISPEEDEDPSGNEEGYNG--AGW 63

Query: 74  SWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKKKNRRKKLP 133
           SWIASR+L+TCI+YSS VT AILLS+LSQAWSEQ R+G  KK PE I+Q+K+K+RR KLP
Sbjct: 64  SWIASRILKTCISYSSGVTAAILLSDLSQAWSEQRRVGGSKKRPEIIDQMKRKHRRAKLP 123

Query: 134 KTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLYLHCRFYDL 193
            TVTIDSIYEKNFLSLSSVLEAV+V+  +LPGTNI+MLTLGD+WSSNTIDLYLH R+YDL
Sbjct: 124 NTVTIDSIYEKNFLSLSSVLEAVVVDAHVLPGTNIYMLTLGDYWSSNTIDLYLHRRYYDL 183

Query: 194 V---GGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLGAQFCS 253
           V    GILKK R+IFLTGCYLR A  G G PRLLPTEYL+ILLDE+ DDD IL+GAQFCS
Sbjct: 184 VDPPNGILKKAREIFLTGCYLRTAKEGCGSPRLLPTEYLVILLDEDLDDDAILIGAQFCS 243

Query: 254 DSFSSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLDNDGFK 313
           DSFSS+S D V  G +YSLYAR        IESI  +EI E+  GLQ  QI+L+DNDG K
Sbjct: 244 DSFSSISHDGVKNGVSYSLYAR--------IESISSLEILEQCGGLQRKQITLVDNDGVK 303

Query: 314 LKFLLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYLVPCIQ 373
           L+FLLW EQVILANL+SVGS+LALDRPYIA   E+ L T DE CLEYG+ATQLYLVP +Q
Sbjct: 304 LRFLLWNEQVILANLISVGSMLALDRPYIAIAAESALETIDEFCLEYGTATQLYLVPFVQ 363

Query: 374 HEEQVCV-LTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVVDLQD 433
           HEEQVC+  TQN +Q S+    + PTQ P+VSQVSLPCDS G+IDF NYPF+ FV DL  
Sbjct: 364 HEEQVCLSSTQNRTQGSKLHAAADPTQGPKVSQVSLPCDSQGSIDFSNYPFQLFVADLHG 423

Query: 434 KMTGISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHTVYIS 493
           KMTGISLYG++ D+  ER T   +F +++ED+TG I AKLHF +SWSLGRV VGHT YIS
Sbjct: 424 KMTGISLYGVVRDVFRERETAGVIFLLKLEDSTGSIWAKLHFSQSWSLGRVSVGHTAYIS 483

Query: 494 GLTCT-IKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSNSHGTKVCR 553
           GLTC+  K++  E  W E   G SF+NLSCLPAL+ SSCLHK+SRLSDL+S  +   +CR
Sbjct: 484 GLTCSKTKQDRFELSWCETDDGTSFINLSCLPALVNSSCLHKLSRLSDLSSRRNSMHICR 543

Query: 554 VRLDQVSHCHVSTKFLHANCGHFVEETP-GRTECSFCRCECKSELV-RTFDLKITLADDT 613
           V +DQV HCHV+T+F HA CGHFV+E P G  ECSFC C+C SE+V R F LK+TLAD  
Sbjct: 544 VWIDQVDHCHVTTRFSHAPCGHFVKEMPSGAVECSFCHCDCDSEVVMRAFYLKLTLADKN 603

Query: 614 AKIFACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQ-TSKCGD 673
            KIFA CTGQTA ELLQISPDEF EL E+EQVMYPSSLENE F+VA+VNC+RQ      D
Sbjct: 604 TKIFAWCTGQTAMELLQISPDEFYELSEDEQVMYPSSLENERFIVALVNCKRQAVHGSRD 663

Query: 674 NVYSVNDPLSWEITRALKCE 683
           +     D +SWEITRALKCE
Sbjct: 664 SQTPEADAVSWEITRALKCE 673

[Close]

BLAST of Cp4.1LG08g05180 vs. TrEMBL
Match: A0A0D2S9S4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G258500 PE=4 SV=1)

HSP 1 Score: 858.6 bits (2217), Expect = 5.2e-246
Identity = 443/678 (65.34%), Postives = 525/678 (77.43%), Query Frame = 1


Query: 16  GNSAMELNDRRRLQ---EEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKGTETYTPGWSW 75
           G S ME ++ ++L+   E+E++DPFL FI+YA SV++ E++ED   N +G      GWSW
Sbjct: 6   GASLMETDNHKKLEGEGEDEEEDPFLAFIEYAWSVISPEEDEDPSGNEEGYNG--AGWSW 65

Query: 76  IASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKKKNRRKKLPKT 135
           IASR+L+TCI+YSS VT AILLS+LSQAWSEQ R+G  KK PE I+Q+K+K+RR KLP T
Sbjct: 66  IASRILKTCISYSSGVTAAILLSDLSQAWSEQRRVGGSKKRPEIIDQMKRKHRRAKLPNT 125

Query: 136 VTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLYLHCRFYDLV- 195
           VTIDSIYEKNFLSLSSVLEAV+V+  +LPGTNI+MLTLGD+WSSNTIDLYLH R+YDLV 
Sbjct: 126 VTIDSIYEKNFLSLSSVLEAVVVDAHVLPGTNIYMLTLGDYWSSNTIDLYLHRRYYDLVD 185

Query: 196 --GGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLGAQFCSDS 255
              GILKK R+IFLTGCYLR A  G G PRLLPTEYL+ILLDE+ DDD IL+GAQFCSDS
Sbjct: 186 PPNGILKKAREIFLTGCYLRTAKEGCGSPRLLPTEYLVILLDEDLDDDAILIGAQFCSDS 245

Query: 256 FSSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLDNDGFKLK 315
           FSS+S   V  G +YSLYAR        IESI  +EI E+  GLQ  QI+L+DNDG KL+
Sbjct: 246 FSSISHAGVKNGVSYSLYAR--------IESITSLEILEQCGGLQRKQITLVDNDGVKLR 305

Query: 316 FLLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYLVPCIQHE 375
           FLLW EQVILANL SVGS+LALDRPYIA   E+ L TSDE CLEYG+ATQLYLVP +QHE
Sbjct: 306 FLLWNEQVILANLFSVGSMLALDRPYIAIAAESALETSDEFCLEYGTATQLYLVPFVQHE 365

Query: 376 EQVCV-LTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVVDLQDKM 435
           EQVC+  TQN +Q S+    + PTQ P+VSQVSLPCDS G+IDF NYPF+ FV DL  KM
Sbjct: 366 EQVCLSSTQNRTQGSKLHAAADPTQGPKVSQVSLPCDSQGSIDFSNYPFQLFVADLHGKM 425

Query: 436 TGISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHTVYISGL 495
           TGISLYG++ D+  ER T   +F +++ED+TG I AKLHF +SWSLGRV VGHT YISGL
Sbjct: 426 TGISLYGVVRDVFRERETAGVIFLLKLEDSTGSIWAKLHFSQSWSLGRVSVGHTAYISGL 485

Query: 496 TCT-IKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSNSHGTKVCRVR 555
           TC+  K++  E  W E   GASF+NLSCLPAL+ SSCLHK+SRLSDL+S  +   +CRV 
Sbjct: 486 TCSKTKQDRFELSWCETDDGASFINLSCLPALVNSSCLHKLSRLSDLSSRRNSMHICRVW 545

Query: 556 LDQVSHCHVSTKFLHANCGHFVEETP-GRTECSFCRCECKSELV-RTFDLKITLADDTAK 615
           +DQV HCHV+T+F HA CGHFV+E P G  ECSFC C+C SE+V R F LK+TLAD   K
Sbjct: 546 IDQVDHCHVTTRFSHAPCGHFVKEMPSGAVECSFCHCDCDSEVVMRAFYLKLTLADKNTK 605

Query: 616 IFACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQ-TSKCGDNV 675
           IFA CTGQTA ELLQISPDEF EL E+EQVMYPSSLENE F+VA+VNC+RQ      D+ 
Sbjct: 606 IFAWCTGQTAMELLQISPDEFYELSEDEQVMYPSSLENERFIVALVNCKRQAVHGSRDSQ 665

Query: 676 YSVNDPLSWEITRALKCE 683
               D +SWEITRALKCE
Sbjct: 666 TPEADAVSWEITRALKCE 673

[Close]

BLAST of Cp4.1LG08g05180 vs. TAIR10
Match: AT3G17030.1 (AT3G17030.1 Nucleic acid-binding proteins superfamily)

HSP 1 Score: 741.1 bits (1912), Expect = 6.1e-214
Identity = 388/688 (56.40%), Postives = 494/688 (71.80%), Query Frame = 1


Query: 13  EAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFD------PNVKGTETY 72
           +  G S +E+ D     +EE +DPFL F+DYAR+V++ ED+ED        P    TE  
Sbjct: 3   DTNGASLIEIGD-----QEEVEDPFLAFLDYARTVISPEDDEDEKEESKRGPGEAMTEAS 62

Query: 73  TPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKKKNRR 132
            PGW W+ASR+L+TC AYSS VT AILLS+LSQAW EQ++ G  KK PE I+QLKK +RR
Sbjct: 63  GPGWGWVASRILKTCTAYSSGVTAAILLSDLSQAWHEQNKPGMSKKKPELIDQLKKGHRR 122

Query: 133 KKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLYLHCR 192
           ++L  TVTIDSIYEKNFLS++SVLEAVI+   +LPGTNI MLTLGDFWSSNTIDLYLH R
Sbjct: 123 RRLANTVTIDSIYEKNFLSMNSVLEAVIINADVLPGTNIFMLTLGDFWSSNTIDLYLHRR 182

Query: 193 FYDLV---GGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLGA 252
           +Y+LV    GIL+KGR++ +TGCYLR A  G G PRLLPTEYL++LLDE++DDD IL+ A
Sbjct: 183 YYELVETPNGILRKGREVLITGCYLRTAREGFGTPRLLPTEYLVVLLDEDQDDDAILIAA 242

Query: 253 QFCSDSFSSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLDN 312
           QFCSD+FSSVSLDA N G +YSLYAR        IESIGP+E     +  +  QISL+D 
Sbjct: 243 QFCSDTFSSVSLDAFNDGASYSLYAR--------IESIGPLESELTFSTARRRQISLVDG 302

Query: 313 DGFKLKFLLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYLV 372
           DG +LKF+LWGEQVI+ANLLSVGS+L ++RPYI+++ E+ +  + E CLEYGSAT LYLV
Sbjct: 303 DGDRLKFILWGEQVIVANLLSVGSVLGIERPYISSLEESAMEGNYEFCLEYGSATHLYLV 362

Query: 373 PCIQHEEQVCV-LTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVV 432
           P    EE+VCV L+Q+  Q S+ LG+        VSQV+LP D+ G++DF NYPFR+ + 
Sbjct: 363 PSTLQEERVCVALSQHQCQGSKLLGS------VGVSQVTLPRDADGSVDFSNYPFRTMIT 422

Query: 433 DLQDKMTGISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHT 492
           D++DK TGISLYG++ DI  + N T  VFS++IED TG I AKLHF   WSLGR+G+GH 
Sbjct: 423 DIRDKTTGISLYGVVTDISCDPNATGVVFSLKIEDTTGAIWAKLHFTNYWSLGRLGLGHV 482

Query: 493 VYISGLTCTIKKNN-LEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLT-SNSHG 552
           VY+SGL+C I K N +E LW E    A+FVNLSCLPA LTSSC+H IS LS ++      
Sbjct: 483 VYVSGLSCKITKENCIEMLWHEKDEKATFVNLSCLPAFLTSSCIHLISTLSQISKQRKPA 542

Query: 553 TKVCRVRLDQVSHCH-VSTKFLHANCGHFVEETPGRT-----ECSFCRCECKS--ELVRT 612
             +CRV+LD++  CH ++T+  H+ CGHF++E    +      CSFCR  C S  E+VRT
Sbjct: 543 INICRVKLDEIDQCHNINTRLAHSLCGHFIDEESSSSYGANLHCSFCRVSCNSNTEVVRT 602

Query: 613 FDLKITLADDTAKIFACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVN 672
           F + ITLAD+  K++A CTGQ+A+ +LQISPDEFC+LPE++Q+MYPSSLENE F+V + N
Sbjct: 603 FHITITLADEETKLYAWCTGQSASAILQISPDEFCDLPEDDQLMYPSSLENEWFLVILAN 662

Query: 673 CRRQTSKCGDNVYSVNDPLSWEITRALK 681
              +    G       D   WEITRALK
Sbjct: 663 SGSRNLGSGHE----TDDTCWEITRALK 667

[Close]

BLAST of Cp4.1LG08g05180 vs. NCBI nr
Match: gi|449433435|ref|XP_004134503.1| (PREDICTED: uncharacterized protein LOC101215087 isoform X2 [Cucumis sativus])

HSP 1 Score: 1201.4 bits (3107), Expect = 0.0e+00
Identity = 589/680 (86.62%), Postives = 636/680 (93.53%), Query Frame = 1


Query: 3   SSRGRHFNSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKG 62
           SS  +HFNS +A  NSAMEL+D ++LQEE DDDPFLKF+DYARSVLAFED+EDFDPN+ G
Sbjct: 2   SSHSKHFNSHDAARNSAMELDDPQKLQEEGDDDPFLKFVDYARSVLAFEDDEDFDPNING 61

Query: 63  TETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKK 122
           TET+TPGW+WIASRVLRTC+AYSSSVTPAILLSELSQAW EQHR+GAPKKIPECINQLKK
Sbjct: 62  TETHTPGWTWIASRVLRTCMAYSSSVTPAILLSELSQAWYEQHRVGAPKKIPECINQLKK 121

Query: 123 KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLY 182
           KNRRKKLPKTVTIDSIYEKNFL+LSSVLEAVI++EFILPGTNIHMLTLGDFWSSNTIDLY
Sbjct: 122 KNRRKKLPKTVTIDSIYEKNFLALSSVLEAVILDEFILPGTNIHMLTLGDFWSSNTIDLY 181

Query: 183 LHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLG 242
           LH RFYDLV GILKKGRQIF+TGCYLRAASGGSG+PRLLPTEYLIILLDEEEDDDV+LLG
Sbjct: 182 LHRRFYDLVNGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLIILLDEEEDDDVMLLG 241

Query: 243 AQFCSDSFSSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLD 302
           AQFCSD+FSSVSLD+VN+GTTYSLYAR        IESIGP+EIHE  NGL+MIQI L+D
Sbjct: 242 AQFCSDTFSSVSLDSVNEGTTYSLYAR--------IESIGPLEIHEMMNGLRMIQIILVD 301

Query: 303 NDGFKLKFLLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYL 362
           NDGFKLKFLLWGEQV+LANLLSVGS+LALDRPY+ATVNENG+GTSDELCLEYGSATQLYL
Sbjct: 302 NDGFKLKFLLWGEQVLLANLLSVGSVLALDRPYVATVNENGVGTSDELCLEYGSATQLYL 361

Query: 363 VPCIQHEEQVCVLTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVV 422
           VPCIQHEEQVCVLTQNI+QASRT+  SYPTQ P+VSQVSLPCDSHG IDFGNYPFRSFV+
Sbjct: 362 VPCIQHEEQVCVLTQNINQASRTVSMSYPTQSPQVSQVSLPCDSHGAIDFGNYPFRSFVI 421

Query: 423 DLQDKMTGISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHT 482
           DLQDKMTGISLYG ++DI NERNTTEA FSMRIEDNTG++ AKL FVRSWSLGRV VGHT
Sbjct: 422 DLQDKMTGISLYGNVLDIANERNTTEAGFSMRIEDNTGEVLAKLRFVRSWSLGRVSVGHT 481

Query: 483 VYISGLTCTIKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSNSHGTK 542
           V+ISGLTCT  KN LEALWIENHVGASFVNLSCLPALLTSSCLHK+SRLSDLTSN+HGTK
Sbjct: 482 VFISGLTCTKNKNRLEALWIENHVGASFVNLSCLPALLTSSCLHKLSRLSDLTSNTHGTK 541

Query: 543 VCRVRLDQVSHCHVSTKFLHANCGHFVEETPGRTECSFCRCECKSELVRTFDLKITLADD 602
           VC+VRLDQVSHCHVSTKFLHA CGHFVEETP R ECSFCRCECKSEL+RTFDLKITLADD
Sbjct: 542 VCQVRLDQVSHCHVSTKFLHAICGHFVEETPARIECSFCRCECKSELMRTFDLKITLADD 601

Query: 603 TAKIFACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQTSKCGD 662
           +AKIFA CTGQTAAELLQISPDEFCELPEEEQVMYPSSLENE+FVVAIVNCRR++S  G+
Sbjct: 602 SAKIFAWCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENENFVVAIVNCRRRSSTYGN 661

Query: 663 NVYSVNDPLSWEITRALKCE 683
           N+   NDPLSWEITRALKCE
Sbjct: 662 NLNFANDPLSWEITRALKCE 673

[Close]

BLAST of Cp4.1LG08g05180 vs. NCBI nr
Match: gi|659076944|ref|XP_008438949.1| (PREDICTED: uncharacterized protein LOC103483891 isoform X1 [Cucumis melo])

HSP 1 Score: 1199.1 bits (3101), Expect = 0.0e+00
Identity = 594/680 (87.35%), Postives = 632/680 (92.94%), Query Frame = 1


Query: 3   SSRGRHFNSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKG 62
           SS  +HFNS +AG  SAMEL+D R+LQEE DDDPFLKF+DYARSVLAFED+EDFDPNV G
Sbjct: 2   SSLSKHFNSHDAGRYSAMELDDPRKLQEEGDDDPFLKFVDYARSVLAFEDDEDFDPNVNG 61

Query: 63  TETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKK 122
           TET TPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAW EQHR+GAPKKIPECINQLKK
Sbjct: 62  TETDTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWYEQHRVGAPKKIPECINQLKK 121

Query: 123 KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLY 182
           KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI++EFILPGTNIHMLTLGDFWSSNTIDLY
Sbjct: 122 KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVILDEFILPGTNIHMLTLGDFWSSNTIDLY 181

Query: 183 LHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLG 242
           LH RFYDLV GILKKGRQIF+TGCYLRAASGGSG+PRLLPTEYL+ILLDEEEDDDV+LLG
Sbjct: 182 LHRRFYDLVDGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLVILLDEEEDDDVMLLG 241

Query: 243 AQFCSDSFSSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLD 302
           AQFCSD+FSSVSLD+VN+GTTYSLYAR        IESIGP+EIHEK NGL+MIQI L+D
Sbjct: 242 AQFCSDTFSSVSLDSVNEGTTYSLYAR--------IESIGPLEIHEKINGLRMIQIILVD 301

Query: 303 NDGFKLKFLLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYL 362
           NDGFKLKFLLWGEQV+LA LLSVGS+LALDRPY+ATVNENG+GTS+ELCLEYGSATQLYL
Sbjct: 302 NDGFKLKFLLWGEQVLLAKLLSVGSVLALDRPYVATVNENGVGTSEELCLEYGSATQLYL 361

Query: 363 VPCIQHEEQVCVLTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVV 422
           VPCIQHEEQVCVLTQNI+QASRT+  SYPTQ P+VSQVSLPCDSHG IDFGNYPFRSFV+
Sbjct: 362 VPCIQHEEQVCVLTQNINQASRTVSMSYPTQGPQVSQVSLPCDSHGAIDFGNYPFRSFVI 421

Query: 423 DLQDKMTGISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHT 482
           DLQDKMTGISLYG ++DI NERNTTEA FSMRIEDNTG+I AKL F RSWSLGRV VGHT
Sbjct: 422 DLQDKMTGISLYGNVLDIANERNTTEAGFSMRIEDNTGEILAKLRFERSWSLGRVSVGHT 481

Query: 483 VYISGLTCTIKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSNSHGTK 542
           V+ISGLTCT  KN LEALWIENHVGASFVNLSCLPALLTSSCLHK+SRLSDLTSN+HGTK
Sbjct: 482 VFISGLTCTKNKNRLEALWIENHVGASFVNLSCLPALLTSSCLHKLSRLSDLTSNTHGTK 541

Query: 543 VCRVRLDQVSHCHVSTKFLHANCGHFVEETPGRTECSFCRCECKSELVRTFDLKITLADD 602
           VCRVRLDQVSHCHVSTKFLHA CGHFVEETP R ECSFC CECKSELVRTFDLKITLADD
Sbjct: 542 VCRVRLDQVSHCHVSTKFLHAICGHFVEETPARIECSFCCCECKSELVRTFDLKITLADD 601

Query: 603 TAKIFACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQTSKCGD 662
           +AKIFA C GQTAAELLQISPDEFCELPEEEQVMYPSSLENE+FVVAIVNCRRQ+ K G+
Sbjct: 602 SAKIFAWCMGQTAAELLQISPDEFCELPEEEQVMYPSSLENENFVVAIVNCRRQSRKYGN 661

Query: 663 NVYSVNDPLSWEITRALKCE 683
           NV   NDPLSWEITRALKCE
Sbjct: 662 NVNFANDPLSWEITRALKCE 673

[Close]

BLAST of Cp4.1LG08g05180 vs. NCBI nr
Match: gi|778679070|ref|XP_011651084.1| (PREDICTED: uncharacterized protein LOC101215087 isoform X1 [Cucumis sativus])

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 589/685 (85.99%), Postives = 636/685 (92.85%), Query Frame = 1


Query: 3   SSRGRHFNSDEAGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKG 62
           SS  +HFNS +A  NSAMEL+D ++LQEE DDDPFLKF+DYARSVLAFED+EDFDPN+ G
Sbjct: 2   SSHSKHFNSHDAARNSAMELDDPQKLQEEGDDDPFLKFVDYARSVLAFEDDEDFDPNING 61

Query: 63  TETYTPGWSWIASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKK 122
           TET+TPGW+WIASRVLRTC+AYSSSVTPAILLSELSQAW EQHR+GAPKKIPECINQLKK
Sbjct: 62  TETHTPGWTWIASRVLRTCMAYSSSVTPAILLSELSQAWYEQHRVGAPKKIPECINQLKK 121

Query: 123 KNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLY 182
           KNRRKKLPKTVTIDSIYEKNFL+LSSVLEAVI++EFILPGTNIHMLTLGDFWSSNTIDLY
Sbjct: 122 KNRRKKLPKTVTIDSIYEKNFLALSSVLEAVILDEFILPGTNIHMLTLGDFWSSNTIDLY 181

Query: 183 LHCRFYDLVGGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLG 242
           LH RFYDLV GILKKGRQIF+TGCYLRAASGGSG+PRLLPTEYLIILLDEEEDDDV+LLG
Sbjct: 182 LHRRFYDLVNGILKKGRQIFVTGCYLRAASGGSGYPRLLPTEYLIILLDEEEDDDVMLLG 241

Query: 243 AQFCSDSFSSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLD 302
           AQFCSD+FSSVSLD+VN+GTTYSLYAR        IESIGP+EIHE  NGL+MIQI L+D
Sbjct: 242 AQFCSDTFSSVSLDSVNEGTTYSLYAR--------IESIGPLEIHEMMNGLRMIQIILVD 301

Query: 303 NDGFKLKFLLWGEQVILANLLS-----VGSLLALDRPYIATVNENGLGTSDELCLEYGSA 362
           NDGFKLKFLLWGEQV+LANLLS     VGS+LALDRPY+ATVNENG+GTSDELCLEYGSA
Sbjct: 302 NDGFKLKFLLWGEQVLLANLLSSQLNSVGSVLALDRPYVATVNENGVGTSDELCLEYGSA 361

Query: 363 TQLYLVPCIQHEEQVCVLTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPF 422
           TQLYLVPCIQHEEQVCVLTQNI+QASRT+  SYPTQ P+VSQVSLPCDSHG IDFGNYPF
Sbjct: 362 TQLYLVPCIQHEEQVCVLTQNINQASRTVSMSYPTQSPQVSQVSLPCDSHGAIDFGNYPF 421

Query: 423 RSFVVDLQDKMTGISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRV 482
           RSFV+DLQDKMTGISLYG ++DI NERNTTEA FSMRIEDNTG++ AKL FVRSWSLGRV
Sbjct: 422 RSFVIDLQDKMTGISLYGNVLDIANERNTTEAGFSMRIEDNTGEVLAKLRFVRSWSLGRV 481

Query: 483 GVGHTVYISGLTCTIKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSN 542
            VGHTV+ISGLTCT  KN LEALWIENHVGASFVNLSCLPALLTSSCLHK+SRLSDLTSN
Sbjct: 482 SVGHTVFISGLTCTKNKNRLEALWIENHVGASFVNLSCLPALLTSSCLHKLSRLSDLTSN 541

Query: 543 SHGTKVCRVRLDQVSHCHVSTKFLHANCGHFVEETPGRTECSFCRCECKSELVRTFDLKI 602
           +HGTKVC+VRLDQVSHCHVSTKFLHA CGHFVEETP R ECSFCRCECKSEL+RTFDLKI
Sbjct: 542 THGTKVCQVRLDQVSHCHVSTKFLHAICGHFVEETPARIECSFCRCECKSELMRTFDLKI 601

Query: 603 TLADDTAKIFACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQT 662
           TLADD+AKIFA CTGQTAAELLQISPDEFCELPEEEQVMYPSSLENE+FVVAIVNCRR++
Sbjct: 602 TLADDSAKIFAWCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENENFVVAIVNCRRRS 661

Query: 663 SKCGDNVYSVNDPLSWEITRALKCE 683
           S  G+N+   NDPLSWEITRALKCE
Sbjct: 662 STYGNNLNFANDPLSWEITRALKCE 678

[Close]

BLAST of Cp4.1LG08g05180 vs. NCBI nr
Match: gi|590661847|ref|XP_007035786.1| (Nucleic acid-binding proteins superfamily isoform 1 [Theobroma cacao])

HSP 1 Score: 884.4 bits (2284), Expect = 1.3e-253
Identity = 455/675 (67.41%), Postives = 528/675 (78.22%), Query Frame = 1


Query: 14  AGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKGTETYTPGWSWI 73
           + G S ME+++ ++ +EEE++DPFL FIDYARSVL+   +ED DP+        PGWSW 
Sbjct: 4   SNGASLMEIDNDQKQEEEEEEDPFLAFIDYARSVLS--PDEDDDPSGNEAGNSGPGWSWT 63

Query: 74  ASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKKKNRRKKLPKTV 133
            SR+L+TCI+YSS VT AILLS+LSQAWSEQ R GAPK+ PE INQLK+K+RR KLP  V
Sbjct: 64  VSRILKTCISYSSGVTAAILLSDLSQAWSEQRRAGAPKRRPEIINQLKRKHRRTKLPNMV 123

Query: 134 TIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLYLHCRFYDLV-- 193
           TIDSIYEKNFLSL SVLEAVIV+ F+LPGTNI+MLTL D+WSS TIDLYLH R+YDLV  
Sbjct: 124 TIDSIYEKNFLSLGSVLEAVIVDAFVLPGTNIYMLTLRDYWSSKTIDLYLHRRYYDLVDS 183

Query: 194 -GGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLGAQFCSDSF 253
             GILKK R++F+TGCYLR A  GSG PRLLPTEYL+ILLDE+ DDD IL+GAQFCSDSF
Sbjct: 184 PNGILKKEREVFVTGCYLRTAREGSGSPRLLPTEYLVILLDEDLDDDAILIGAQFCSDSF 243

Query: 254 SSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLDNDGFKLKF 313
           SS+SLDAV    +YSLYAR        IESI  +EI  K   LQ  QI+L+DNDG KLKF
Sbjct: 244 SSISLDAVKNDVSYSLYAR--------IESIRSLEILGKCGSLQRKQITLVDNDGVKLKF 303

Query: 314 LLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYLVPCIQHEE 373
           LLW EQVILANL SVGS+LALDRPYIA+  ++ + TSDELCLEYG+ATQLYLVP + HEE
Sbjct: 304 LLWNEQVILANLFSVGSMLALDRPYIASSADSAVETSDELCLEYGTATQLYLVPFVHHEE 363

Query: 374 QVCV-LTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVVDLQDKMT 433
           QVC+  TQN +Q SR   T  PTQ PRVSQV LPCDS G+IDF NYPF+SFV DL+DKMT
Sbjct: 364 QVCLSSTQNCNQGSRLHATVDPTQGPRVSQVILPCDSQGSIDFSNYPFQSFVADLRDKMT 423

Query: 434 GISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHTVYISGLT 493
           GISLYG++ DI  ER T E +FS++IED TG I AKLHF +SWSLGRV  GH VYISGLT
Sbjct: 424 GISLYGVVTDIFRERKTAEVIFSLKIEDVTGAIWAKLHFSQSWSLGRVSHGHMVYISGLT 483

Query: 494 CT-IKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSNSHGTKVCRVRL 553
           C+  K+N  E  W E  VGASF+NLSCLPALL SSCLHK+SRLSDL+S      +CRV +
Sbjct: 484 CSKTKQNCFEVSWFEKDVGASFINLSCLPALLNSSCLHKLSRLSDLSSKRSSMHICRVWV 543

Query: 554 DQVSHCHVSTKFLHANCGHFVEETP-GRTECSFCRCECKSELVRTFDLKITLADDTAKIF 613
           DQV H HV+T+F HA+CGHFV+  P G  +CSFC C C +ELVR F LKITLAD+TAKIF
Sbjct: 544 DQVDHYHVTTRFSHASCGHFVKGMPSGVVKCSFCHCNCDAELVRVFYLKITLADETAKIF 603

Query: 614 ACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQTSKCGDNVYSV 673
           A CTGQTA ELLQISPDEFCELPE+EQVMYPSSLENE F VA+VNC+RQ     D++   
Sbjct: 604 AWCTGQTAMELLQISPDEFCELPEDEQVMYPSSLENERFKVALVNCKRQGYGASDSLTPE 663

Query: 674 NDPLSWEITRALKCE 683
            D +SWEITRALK E
Sbjct: 664 ADAVSWEITRALKYE 668

[Close]

BLAST of Cp4.1LG08g05180 vs. NCBI nr
Match: gi|590661851|ref|XP_007035787.1| (Nucleic acid-binding proteins superfamily, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 878.2 bits (2268), Expect = 9.0e-252
Identity = 456/681 (66.96%), Postives = 528/681 (77.53%), Query Frame = 1


Query: 14  AGGNSAMELNDRRRLQEEEDDDPFLKFIDYARSVLAFEDEEDFDPNVKGTETYTPGWSWI 73
           + G S ME+++ ++ +EEE++DPFL FIDYARSVL+   +ED DP+        PGWSW 
Sbjct: 4   SNGASLMEIDNDQKQEEEEEEDPFLAFIDYARSVLS--PDEDDDPSGNEAGNSGPGWSWT 63

Query: 74  ASRVLRTCIAYSSSVTPAILLSELSQAWSEQHRIGAPKKIPECINQLKKKNRRKKLPKTV 133
            SR+L+TCI+YSS VT AILLS+LSQAWSEQ R GAPK+ PE INQLK+K+RR KLP  V
Sbjct: 64  VSRILKTCISYSSGVTAAILLSDLSQAWSEQRRAGAPKRRPEIINQLKRKHRRTKLPNMV 123

Query: 134 TIDSIYEKNFLSLSSVLEAVIVEEFILPGTNIHMLTLGDFWSSNTIDLYLHCRFYDLV-- 193
           TIDSIYEKNFLSL SVLEAVIV+ F+LPGTNI+MLTL D+WSS TIDLYLH R+YDLV  
Sbjct: 124 TIDSIYEKNFLSLGSVLEAVIVDAFVLPGTNIYMLTLRDYWSSKTIDLYLHRRYYDLVDS 183

Query: 194 -GGILKKGRQIFLTGCYLRAASGGSGHPRLLPTEYLIILLDEEEDDDVILLGAQFCSDSF 253
             GILKK R++F+TGCYLR A  GSG PRLLPTEYL+ILLDE+ DDD IL+GAQFCSDSF
Sbjct: 184 PNGILKKEREVFVTGCYLRTAREGSGSPRLLPTEYLVILLDEDLDDDAILIGAQFCSDSF 243

Query: 254 SSVSLDAVNKGTTYSLYARQDIQLFLQIESIGPIEIHEKTNGLQMIQISLLDNDGFKLKF 313
           SS+SLDAV    +YSLYAR        IESI  +EI  K   LQ  QI+L+DNDG KLKF
Sbjct: 244 SSISLDAVKNDVSYSLYAR--------IESIRSLEILGKCGSLQRKQITLVDNDGVKLKF 303

Query: 314 LLWGEQVILANLLSVGSLLALDRPYIATVNENGLGTSDELCLEYGSATQLYLVPCIQHEE 373
           LLW EQVILANL SVGS+LALDRPYIA+  ++ + TSDELCLEYG+ATQLYLVP + HEE
Sbjct: 304 LLWNEQVILANLFSVGSMLALDRPYIASSADSAVETSDELCLEYGTATQLYLVPFVHHEE 363

Query: 374 QVCV-LTQNISQASRTLGTSYPTQDPRVSQVSLPCDSHGTIDFGNYPFRSFVVDLQDKMT 433
           QVC+  TQN +Q SR   T  PTQ PRVSQV LPCDS G+IDF NYPF+SFV DL+DKMT
Sbjct: 364 QVCLSSTQNCNQGSRLHATVDPTQGPRVSQVILPCDSQGSIDFSNYPFQSFVADLRDKMT 423

Query: 434 GISLYGIIIDIVNERNTTEAVFSMRIEDNTGQISAKLHFVRSWSLGRVGVGHTVYISGLT 493
           GISLYG++ DI  ER T E +FS++IED TG I AKLHF +SWSLGRV  GH VYISGLT
Sbjct: 424 GISLYGVVTDIFRERKTAEVIFSLKIEDVTGAIWAKLHFSQSWSLGRVSHGHMVYISGLT 483

Query: 494 CT-IKKNNLEALWIENHVGASFVNLSCLPALLTSSCLHKISRLSDLTSNSHGTKV----- 553
           C+  K+N  E  W E  VGASF+NLSCLPALL SSCLHK+SRLSDL+S      V     
Sbjct: 484 CSKTKQNCFEVSWFEKDVGASFINLSCLPALLNSSCLHKLSRLSDLSSKRSSMHVWIADD 543

Query: 554 -CRVRLDQVSHCHVSTKFLHANCGHFVEETP-GRTECSFCRCECKSELVRTFDLKITLAD 613
            CRV +DQV H HV+T+F HA+CGHFV+  P G  +CSFC C C +ELVR F LKITLAD
Sbjct: 544 ICRVWVDQVDHYHVTTRFSHASCGHFVKGMPSGVVKCSFCHCNCDAELVRVFYLKITLAD 603

Query: 614 DTAKIFACCTGQTAAELLQISPDEFCELPEEEQVMYPSSLENESFVVAIVNCRRQTSKCG 673
           +TAKIFA CTGQTA ELLQISPDEFCELPE+EQVMYPSSLENE F VA+VNC+RQ     
Sbjct: 604 ETAKIFAWCTGQTAMELLQISPDEFCELPEDEQVMYPSSLENERFKVALVNCKRQGYGAS 663

Query: 674 DNVYSVNDPLSWEITRALKCE 683
           D++    D +SWEITRALK E
Sbjct: 664 DSLTPEADAVSWEITRALKYE 674

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g05180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG08g05180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5D2_CUCSA	0.0e+00	86.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G166300 PE=4 SV=1	[more]
A0A061EQT8_THECC	8.8e-254	67.41	Nucleic acid-binding proteins superfamily isoform 1 OS=Theobroma cacao GN=TCM_02...	[more]
A0A061EQ03_THECC	6.3e-252	66.96	Nucleic acid-binding proteins superfamily, putative isoform 2 OS=Theobroma cacao...	[more]
A0A0B0PQ72_GOSAR	7.9e-247	65.00	cGMP-specific 3',5'-cyclic phosphodiesterase OS=Gossypium arboreum GN=F383_03938...	[more]
A0A0D2S9S4_GOSRA	5.2e-246	65.34	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G258500 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g05180 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17030.1	6.1e-214	56.40	Nucleic acid-binding proteins superfamily	[more]

BLAST of Cp4.1LG08g05180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433435\|ref\|XP_004134503.1\|	0.0e+00	86.62	PREDICTED: uncharacterized protein LOC101215087 isoform X2 [Cucumis sativus]	[more]
gi\|659076944\|ref\|XP_008438949.1\|	0.0e+00	87.35	PREDICTED: uncharacterized protein LOC103483891 isoform X1 [Cucumis melo]	[more]
gi\|778679070\|ref\|XP_011651084.1\|	0.0e+00	85.99	PREDICTED: uncharacterized protein LOC101215087 isoform X1 [Cucumis sativus]	[more]
gi\|590661847\|ref\|XP_007035786.1\|	1.3e-253	67.41	Nucleic acid-binding proteins superfamily isoform 1 [Theobroma cacao]	[more]
gi\|590661851\|ref\|XP_007035787.1\|	9.0e-252	66.96	Nucleic acid-binding proteins superfamily, putative isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012340	NA-bd_OB-fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g05180.1	Cp4.1LG08g05180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	G3DSA:2.40.50.140		coord: 564..660 score: 3.
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 563..663 score: 2.8
None	No IPR available	PANTHER	PTHR36033	FAMILY NOT NAMED	coord: 17..682 score: 2.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g05180	Cucsa.252560	Cucumber (Gy14) v1	cgycpeB0687
Cp4.1LG08g05180	CmaCh06G015610	Cucurbita maxima (Rimu)	cmacpeB853
Cp4.1LG08g05180	CmoCh06G015580	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g05180	Cla021792	Watermelon (97103) v1	cpewmB845
Cp4.1LG08g05180	Csa3G166300	Cucumber (Chinese Long) v2	cpecuB859
Cp4.1LG08g05180	MELO3C006713	Melon (DHL92) v3.5.1	cpemeB813
Cp4.1LG08g05180	CSPI03G14960	Wild cucumber (PI 183967)	cpecpiB861
Cp4.1LG08g05180	Lsi05G015900	Bottle gourd (USVL1VR-Ls)	cpelsiB718
Cp4.1LG08g05180	MELO3C006713.2	Melon (DHL92) v3.6.1	cpemedB951
Cp4.1LG08g05180	CsaV3_3G015150	Cucumber (Chinese Long) v3	cpecucB1056
Cp4.1LG08g05180	Bhi01G000778	Wax gourd	cpewgoB1110
Cp4.1LG08g05180	CsGy3G015070	Cucumber (Gy14) v2	cgybcpeB454
Cp4.1LG08g05180	Carg23736	Silver-seed gourd	carcpeB1321
Cp4.1LG08g05180	Carg19623	Silver-seed gourd	carcpeB0396

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g05180	Cp4.1LG03g11810	Cucurbita pepo (Zucchini)	cpecpeB482

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g05180	Bottle gourd (USVL1VR-Ls)	cpelsiB697
Cp4.1LG08g05180	Watermelon (Charleston Gray)	cpewcgB787
Cp4.1LG08g05180	Watermelon (Charleston Gray)	cpewcgB788
Cp4.1LG08g05180	Watermelon (97103) v1	cpewmB853
Cp4.1LG08g05180	Melon (DHL92) v3.5.1	cpemeB793
Cp4.1LG08g05180	Silver-seed gourd	carcpeB0109
Cp4.1LG08g05180	Silver-seed gourd	carcpeB0987
Cp4.1LG08g05180	Wax gourd	cpewgoB1102
Cp4.1LG08g05180	Cucurbita pepo (Zucchini)	cpecpeB194
Cp4.1LG08g05180	Cucurbita pepo (Zucchini)	cpecpeB343
Cp4.1LG08g05180	Cucurbita maxima (Rimu)	cmacpeB292
Cp4.1LG08g05180	Cucurbita maxima (Rimu)	cmacpeB412
Cp4.1LG08g05180	Cucurbita maxima (Rimu)	cmacpeB931
Cp4.1LG08g05180	Cucurbita moschata (Rifu)	cmocpeB254
Cp4.1LG08g05180	Cucurbita moschata (Rifu)	cmocpeB373
Cp4.1LG08g05180	Cucurbita moschata (Rifu)	cmocpeB866