Carg19523 (gene) Silver-seed gourd

Overview
NameCarg19523
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionThioredoxin
LocationCucurbita_argyrosperma_scaffold_104 : 222683 .. 226644 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCCCATTTCGATTCCCAATTCAGAGAGAGAGAGAGAGAGAGATCCTTCAAAATTTTCAATTCGTCAAGCAATCCGATCGTCGTTGACCGACGTTGTCTTATCCCTCTCCGATTTGACCCCTTTTCCGACAGCTTCCCATTAAAATCAATATCCTGAAGAAGGTTCATCCACGAATCCCTGTTTGGTTTTTTTTTGTTTTCTCCACGATTTTTGGATGTCATCATCCCTCCACGGACTACTGAATTGACTCGAGGCTCCAATTCGGGGGTTGTTGAGGGTAATTTTTCTGTCTCTGTAATGGGATCCTCCTGCTCTACTCTTTTTTAATTGTTTTTCAGTGGTTTGTTTATGAATCTAATGAGATGGGTATAGCTGTGTCCTTTTCAATTCTATTATGTTCATGATTCTGTTCTATTCCTTTCTGCTCCAATGCCCTTTTTCTTTTGAATGATACAGTCATTGGCTCCTTGTTTATTTGTTTGTTGGTTGATGAACTTTGAAGTTTGTGTCAACGTTGTAACTTTTAAGGTTGTTTTAGCACTGTGATAAAAGTGGAGCTAGTCTTTGTTTGGTGTCTTTTTCCCAGAATTTGTAACATGTCTGTGAATTGGAAACATTTGCAATAGAAAATGAGTTAAATGTTATGTTTTCTTCCATTGATAGCATATGGTTATACTGATATTTTCTTATCGTTATTTCAGGCTAACCTGTGGTACCTAGGACACTTCGAACATCATCTGCACTTGGACCGCCAAATGGGACTTTGTGCTAGTAAGGTAAGAGCCATTTGGAACATTTAATCTAGTAATGTTAGTAGAGGACTTTGTGGTGGTTTGTCGTGTTGGATTGATGTTTGTACCTGGAACTTTTTTTTTTAATCAATTGTGATACCTAAATAGAATATTATGGATCAGGCCGAAGTTATGAGTTAGAACGTTGATGAGTAACGGGGGAATGAATTTGGCTAGAGCCTGGTTCTGTGGGGTTCAAAGGAGGACTAGATATGTGAGATCCCACATCGGTTGGAAAGGAGAACGAAACATTCTTTATCCGTGTGGAAACTTCTCCCTAGCAGACGTGGTTTAAAAACCTTAAGGGGAAGCTTGAAAAGAAAAGCCCAAAGATGGCACTATCTGTTAGCGGTGGGTTGGGCTGTTATAAATGGTATCAAAGCTAGACATGGGATGATGTGCAGTGAGGAGGTTGAGTTTCGATGTGGGGTGGACACGAGGCGGTGTGCCAACAAAGACGCTGGGCCTCGAAGGGGGTGTATTGGGGGGTCCCACATCGATTGGAGAAGGAAACGAGTGCCAGTGAGGGCGCTGGGTCCTGAAGGGGGGTGGATTGTGAGATCCCGCATCGGTTGGGGAGGAGAACGAAACATTATTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTAAGGGGAAGCCTGAAAGGGAAAGCCCAAAGATGACACTATCTGCTAGCGGTGGGTTTGGGCTGTTATAAATGGTATCAGAGCTAGACATGGGGCAATGTGCAGTGAGGAGGTTGAGTCCTGAAGGGGGGTGGACACAAGGCGGTGTGCCAACAAGGACACTGGGCCTCAAAGGGGGTGGATTGGGGGGTCCCACATCGATTGGAGAAGGGAACGAAACATTCTCTATAAGGTGTGGAAACCTCTTCTTAGCAGACGTGTTTTAAAAACCTTGAAGGAAAGCCCAAAGAGGACAATATCTGCTAGAGGTGGGCTTGGGCTGTGCTTGGCCAACAAATATTGTTGAAGAAGGTGCTTTATAATCATTAGCATTGCACCCTAGAAGGGTACTATTCAACATTTTCTACAGTTATACACTGACTTCAGCAATGCCCCAAAACTTCGATTCCACCCGAGCGTTCGTCAGCTCCTCCTCGTAATTTTGTGTTGACGATCCTATAAAATAAAAACTACGAAAAAGGATCATTTCTGAGATTTCGGCGCACTGCCTGTTTTATGCTCGTTAACGTTCATCTAACTCGGAAGTTTTTGTGTTCCTTGTTTCTAGTCCGAAACCAAAGACGATGAGTCTGAGCATCATGTCGAGTTTGCCACCGGAAATGTGCAGCTCATCACAACCAAAGAAGCTTGGGAGCAAAAGATGGAAGAAGCTAATAAGGATGGCAAAATTGTAAGATTTTGATTAATTTATTGCCTTTGAGCACTGCTGTTGTTTCTGGATGTTATCTCGTAGATAAATCAGGCCCGTTCGTGTTCGTGTTCGTGTTCGTTTCTTTAATTATCTGATAAAAAACGGAACGACTCAGAGAGTATAATATATAGTCTATTTTATGTCATGTCCTTATTTTGTTGCTCAGTTCTTTGCAAGGGAGGTGGGCTTGATCCTCCCCTGCCTTTGGTAATGAAAATTCTCTTATCAAAATGGGTTTAATCCTTTCGTAATCGAGATTATGCGTCGACAGGTGATAGCGAACTTCAGTGCATCGTGGTGTGGTCCGTGCAAGGTGGTTGCTCCATTCTACAGCGAATTGTCGGAGAAATACCCGTCGTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACTGTGAGTAATGAAGTACAATATCATTTATGGAAGAATTTATTCAACTCTTTTTTTCATTCTGGTTCTTGTACGTTGGGAATGCATTGTTTTTGTCAATCTGAACATAGCTCATTTGATAAGATACTAATTATCATCATCAGCCCAGTAGATATGTGAGATCTCACTTCGGTTGGAAAGTGGAATAAAACATTACTTATAAGGGTGTGGAAGCATCTCCCTAGTAGACACATTTAAAATCGTGAGGCTGACGCGATACGTAACAGGCCAAAGTAGATAATATTTGCTAATGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGTCAGACATTGTGTAAGGACCCAAATCCACTGCTAGTAGATATTGTCCTCTTTAGGCTTTCCCTTTCGGGCTTCCTCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCATACCCTTATAAATGGTGATTTGTTCTCCTCCCCAACCAATGTGGGACATTACAATGAATGTGGATCTGGGTCTTTACAAATGGTATCAGAGCCAGTCATCGGACGATTTGTCAGCCTTCTCGCTGTTCCTCGAAGGGGGGTAGACACGAGGCGGTGTGCCAGTAAGAACGCTGGGTCCCAAAGGGGGTGGATTTGGTGGTAGTCCCACATCGATTAGAGAAAGGAATGAGTGTCAGCAAAGACGCTGGGTCCCAAAGGGGGGTGGATTGTGTTGTCCCACATTGGTTGAGGAGAATAAATCACCCTTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGAAAGCCCGAAAGGGAAAGCCCAAAGAGGACAAGATCTACTAGCGGTGGATTTGGGTCGTTACACATTGGGCAGTGTGCCAGCGAGGACGTTGGGCCCCCAAAAGGGGTGGATTGTGAGATCCCACATCGGTTAGAAAAGGGAACGAAACATTTCTTATAAGGGTGTGGAAACATCTCCCTGGTAGACATGTTTTAAAACTGTGAAGTGCGATACATAATGGTCTAAAGTGGACAATATCTACTACTGGTGGACTTGAGCTGTTACAATTGGTATTAGAGCCAGACACCGAGCTATGTGCCAGCGAGAACGCTGGCCCCCAAGGAGGGTGGATTGTGAGATGAAGCTCGTCTAATTCACTACCCCTCCGTTCACTTCACAATCAGCTATAGATTAAGCTTGTTTGGGCTACATTTCTCAGCATATGCTTTGGGTGTTGCAGGATTTCAGCACCACTTGGGATATCAAAGCTACTCCTACCTTTTTCTTCCTCAAAGAAGGACAGCAAATCGACAAGCTCGTCGGGGCGAATAAACCCGAACTAGAGCTGAAAGTCACTGCATTAGCGGATTCTCTTCCTCCCAATCAA

mRNA sequence

CGCCCATTTCGATTCCCAATTCAGAGAGAGAGAGAGAGAGAGATCCTTCAAAATTTTCAATTCGTCAAGCAATCCGATCGTCGTTGACCGACGTTGTCTTATCCCTCTCCGATTTGACCCCTTTTCCGACAGCTTCCCATTAAAATCAATATCCTGAAGAAGGTTCATCCACGAATCCCTGTTTGGTTTTTTTTTGTTTTCTCCACGATTTTTGGATGTCATCATCCCTCCACGGACTACTGAATTGACTCGAGGCTCCAATTCGGGGGTTGTTGAGGGCTAACCTGTGGTACCTAGGACACTTCGAACATCATCTGCACTTGGACCGCCAAATGGGACTTTGTGCTAGTAAGTCCGAAACCAAAGACGATGAGTCTGAGCATCATGTCGAGTTTGCCACCGGAAATGTGCAGCTCATCACAACCAAAGAAGCTTGGGAGCAAAAGATGGAAGAAGCTAATAAGGATGGCAAAATTGTGATAGCGAACTTCAGTGCATCGTGGTGTGGTCCGTGCAAGGTGGTTGCTCCATTCTACAGCGAATTGTCGGAGAAATACCCGTCGTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACTGATTTCAGCACCACTTGGGATATCAAAGCTACTCCTACCTTTTTCTTCCTCAAAGAAGGACAGCAAATCGACAAGCTCGTCGGGGCGAATAAACCCGAACTAGAGCTGAAAGTCACTGCATTAGCGGATTCTCTTCCTCCCAATCAA

Coding sequence (CDS)

ATGGGACTTTGTGCTAGTAAGTCCGAAACCAAAGACGATGAGTCTGAGCATCATGTCGAGTTTGCCACCGGAAATGTGCAGCTCATCACAACCAAAGAAGCTTGGGAGCAAAAGATGGAAGAAGCTAATAAGGATGGCAAAATTGTGATAGCGAACTTCAGTGCATCGTGGTGTGGTCCGTGCAAGGTGGTTGCTCCATTCTACAGCGAATTGTCGGAGAAATACCCGTCGTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACTGATTTCAGCACCACTTGGGATATCAAAGCTACTCCTACCTTTTTCTTCCTCAAAGAAGGACAGCAAATCGACAAGCTCGTCGGGGCGAATAAACCCGAACTAGAGCTGAAAGTCACTGCATTAGCGGATTCTCTTCCTCCCAATCAA

Protein sequence

MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
Homology
[Close]
BLAST of Carg19523 vs. NCBI nr
Match: XP_022950143.1 (thioredoxin H-type-like [Cucurbita moschata] >XP_022950144.1 thioredoxin H-type-like [Cucurbita moschata] >XP_023543289.1 thioredoxin H-type-like [Cucurbita pepo subsp. pepo] >XP_023543290.1 thioredoxin H-type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.9 bits (725), Expect = 3.0e-73
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP
Sbjct: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 121 PELELKVTALADSLPPNQ 139
           PELELKVTALADSLPPNQ
Sbjct: 121 PELELKVTALADSLPPNQ 138

[Close]
BLAST of Carg19523 vs. NCBI nr
Match: XP_022978310.1 (thioredoxin H-type-like [Cucurbita maxima] >XP_022978312.1 thioredoxin H-type-like [Cucurbita maxima])

HSP 1 Score: 280.0 bits (715), Expect = 4.3e-72
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQK+EEANKDGKIVIANFSA WCGP
Sbjct: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 121 PELELKVTALADSLPPNQ 139
           PELELKVTALADSLPPNQ
Sbjct: 121 PELELKVTALADSLPPNQ 138

[Close]
BLAST of Carg19523 vs. NCBI nr
Match: XP_004142678.1 (PREDICTED: thioredoxin H-type [Cucumis sativus] >KGN54459.1 hypothetical protein Csa_4G334700 [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 4.7e-63
Identity = 119/138 (86.23%), Postives = 129/138 (93.48%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MGLC SK+ETKDD+S+HHVEFA G V LITTKEAW+QK+EEAN  GKIVIANFSA+WCGP
Sbjct: 1   MGLCFSKAETKDDDSDHHVEFAAGKVHLITTKEAWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CKVVAPFYSELSEKY SLMFLVVDVDELTDFST+WDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELTDFSTSWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 121 PELELKVTALADSLPPNQ 139
            ELE K+TA+ADSLPPN+
Sbjct: 121 IELEKKITAVADSLPPNR 138

[Close]
BLAST of Carg19523 vs. NCBI nr
Match: XP_008463273.1 (PREDICTED: thioredoxin H-type [Cucumis melo])

HSP 1 Score: 250.0 bits (637), Expect = 4.7e-63
Identity = 119/138 (86.23%), Postives = 129/138 (93.48%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MGLC SKSET+DD+SEHHVEFA GNV LITTKE+W+QK+EEAN  GKIVIANFSA+WCGP
Sbjct: 1   MGLCFSKSETRDDDSEHHVEFAAGNVHLITTKESWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CKVVAPFYSELSEKY SLMFLVVDVDELTDFST+WDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELTDFSTSWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 121 PELELKVTALADSLPPNQ 139
            ELE K+ A+ADSLPPN+
Sbjct: 121 IELEKKIIAVADSLPPNR 138

[Close]
BLAST of Carg19523 vs. NCBI nr
Match: XP_022924951.1 (thioredoxin H-type-like isoform X1 [Cucurbita moschata] >XP_023517224.1 thioredoxin H-type-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 3.8e-60
Identity = 111/138 (80.43%), Postives = 126/138 (91.30%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MGLC SK + KD+ESEHHVEF  GNV LITTK AW+QK+EEA  DGKIVIANFSA+WCGP
Sbjct: 1   MGLCCSKPDIKDEESEHHVEFGAGNVHLITTKVAWDQKLEEARSDGKIVIANFSATWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CK++APFY ELSEKYPSLMFLVVDVDEL+DFST+WDIKATPTFFFLK+GQQIDKLVGANK
Sbjct: 61  CKMIAPFYCELSEKYPSLMFLVVDVDELSDFSTSWDIKATPTFFFLKDGQQIDKLVGANK 120

Query: 121 PELELKVTALADSLPPNQ 139
           PEL+ K+TA+ADSL P++
Sbjct: 121 PELQQKITAMADSLVPDR 138

[Close]
BLAST of Carg19523 vs. TAIR10
Match: AT3G08710.1 (thioredoxin H-type 9)

HSP 1 Score: 208.0 bits (528), Expect = 3.7e-54
Identity = 97/135 (71.85%), Postives = 119/135 (88.15%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MG C SK +  DD+S H+VEF+ GNV LITTKE+W+ K+ EA++DGKIV+ANFSA+WCGP
Sbjct: 1   MGSCVSKGK-GDDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CK+VAPF+ ELSEK+ SLMFL+VDVDEL+DFS++WDIKATPTFFFLK GQQI KLVGANK
Sbjct: 61  CKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANK 120

Query: 121 PELELKVTALADSLP 136
           PEL+ KVT++ DS+P
Sbjct: 121 PELQKKVTSIIDSVP 134

[Close]
BLAST of Carg19523 vs. TAIR10
Match: AT3G56420.1 (Thioredoxin superfamily protein)

HSP 1 Score: 130.6 bits (327), Expect = 7.6e-31
Identity = 56/109 (51.38%), Postives = 79/109 (72.48%), Query Frame = 0 

Query: 24  GNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVV 83
           G V  ++  E WE+K+ EAN  GKI++ NFSA WC PCK + P + +L+ +YPS++F+ V
Sbjct: 40  GKVHPVSRIEKWEEKITEANNHGKILVVNFSAPWCVPCKKIEPVFRDLASRYPSMIFVTV 99

Query: 84  DVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPELELKVTALAD 133
           DV+EL +FS  W+++ATPT  FLK+G+Q+DKLVGA   EL+ K  A AD
Sbjct: 100 DVEELAEFSNEWNVEATPTVVFLKDGRQMDKLVGAETSELQKKTAAAAD 148

[Close]
BLAST of Carg19523 vs. TAIR10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2)

HSP 1 Score: 125.9 bits (315), Expect = 1.9e-29
Identity = 57/131 (43.51%), Postives = 82/131 (62.60%), Query Frame = 0 

Query: 4   CASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKV 63
           C ++       S+    F  G V  ++  E WE+K+ EAN  GKI++ NF ASWC P K 
Sbjct: 20  CCNRRNKTQARSQKGSYFIKGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKT 79

Query: 64  VAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPEL 123
           + P Y EL+  Y S++F+ +DV+EL +FS  W++ ATPT  FLK+G+Q+DKLVG +  EL
Sbjct: 80  ILPIYQELASTYTSMIFVTIDVEELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAEL 139

Query: 124 ELKVTALADSL 135
           + K  A A+ L
Sbjct: 140 QKKTAAAANLL 150

[Close]
BLAST of Carg19523 vs. TAIR10
Match: AT3G51030.1 (thioredoxin H-type 1)

HSP 1 Score: 115.9 bits (289), Expect = 1.9e-26
Identity = 48/101 (47.52%), Postives = 75/101 (74.26%), Query Frame = 0 

Query: 24  GNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVV 83
           G V    T E W +++++AN+   +V+ +F+ASWCGPC+ +APF+++L++K P+++FL V
Sbjct: 6   GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKV 65

Query: 84  DVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPELE 125
           D DEL   ++ W I+A PTF FLKEG+ +DK+VGA K EL+
Sbjct: 66  DTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQ 106

[Close]
BLAST of Carg19523 vs. TAIR10
Match: AT1G45145.1 (thioredoxin H-type 5)

HSP 1 Score: 102.4 bits (254), Expect = 2.2e-22
Identity = 42/104 (40.38%), Postives = 73/104 (70.19%), Query Frame = 0 

Query: 24  GNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVV 83
           G V    T E W +K+++AN+  K+++ +F+ASWC PC+ +AP ++E+++K+ +++F  +
Sbjct: 5   GEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKI 64

Query: 84  DVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPELELKV 128
           DVDEL   +  + ++A PTF F+KEG  ID++VGA K E+  K+
Sbjct: 65  DVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108

[Close]
BLAST of Carg19523 vs. Swiss-Prot
Match: sp|P85801|TRXH_POPJC (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.4e-55
Identity = 96/137 (70.07%), Postives = 116/137 (84.67%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MGLC +K     D+ E H+E A GNV LITTKE W+QK+ EA++DGKIV+ANFSA WCGP
Sbjct: 1   MGLCLAKRNHDADDDEPHIELAGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CK +AP+Y ELSE YPSLMFLV+DVDEL+DFS +W+IKATPTFFFL++GQQ+DKLVGANK
Sbjct: 61  CKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANK 120

Query: 121 PELELKVTALADSLPPN 138
           PEL  K+TA+ DSLPP+
Sbjct: 121 PELHKKITAILDSLPPS 137

[Close]
BLAST of Carg19523 vs. Swiss-Prot
Match: sp|Q9C9Y6|TRXH9_ARATH (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 6.7e-53
Identity = 97/135 (71.85%), Postives = 119/135 (88.15%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MG C SK +  DD+S H+VEF+ GNV LITTKE+W+ K+ EA++DGKIV+ANFSA+WCGP
Sbjct: 1   MGSCVSKGK-GDDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CK+VAPF+ ELSEK+ SLMFL+VDVDEL+DFS++WDIKATPTFFFLK GQQI KLVGANK
Sbjct: 61  CKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANK 120

Query: 121 PELELKVTALADSLP 136
           PEL+ KVT++ DS+P
Sbjct: 121 PELQKKVTSIIDSVP 134

[Close]
BLAST of Carg19523 vs. Swiss-Prot
Match: sp|Q9AS75|TRH41_ORYSJ (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.5e-47
Identity = 88/133 (66.17%), Postives = 108/133 (81.20%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MG C  K E  D+E +  ++F  GNV +I+ KE W+ K+ EANKDGKIVIANFSA+WCGP
Sbjct: 1   MGSCVGK-ERSDEEDK--IDFKGGNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           C+V+AP Y+E+S+ YP  MFL +DVDEL DFS++WDI+ATPTFFFLK G+Q+DKLVGANK
Sbjct: 61  CRVIAPVYAEMSQTYPQFMFLTIDVDELMDFSSSWDIRATPTFFFLKNGEQVDKLVGANK 120

Query: 121 PELELKVTALADS 134
           PELE KV ALADS
Sbjct: 121 PELEKKVAALADS 130

[Close]
BLAST of Carg19523 vs. Swiss-Prot
Match: sp|Q0DKF1|TRH42_ORYSJ (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.1e-46
Identity = 85/132 (64.39%), Postives = 108/132 (81.82%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MG C  K     +E +  ++F  GNV +IT+KE W++K+EEANKDGKIV+ANFSASWCGP
Sbjct: 1   MGGCVGKGRRHIEEDK--LDFKGGNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           C+V+AP Y+E+S+ YP LMFL +DVD+L DFS++WDI+ATPTFFF+K  +Q+DKLVGANK
Sbjct: 61  CRVIAPIYAEMSKTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKNEKQVDKLVGANK 120

Query: 121 PELELKVTALAD 133
           PELE KV ALAD
Sbjct: 121 PELEKKVQALAD 130

[Close]
BLAST of Carg19523 vs. Swiss-Prot
Match: sp|Q9LXZ8|TRH10_ARATH (Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-29
Identity = 56/109 (51.38%), Postives = 79/109 (72.48%), Query Frame = 0 

Query: 24  GNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVV 83
           G V  ++  E WE+K+ EAN  GKI++ NFSA WC PCK + P + +L+ +YPS++F+ V
Sbjct: 40  GKVHPVSRIEKWEEKITEANNHGKILVVNFSAPWCVPCKKIEPVFRDLASRYPSMIFVTV 99

Query: 84  DVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPELELKVTALAD 133
           DV+EL +FS  W+++ATPT  FLK+G+Q+DKLVGA   EL+ K  A AD
Sbjct: 100 DVEELAEFSNEWNVEATPTVVFLKDGRQMDKLVGAETSELQKKTAAAAD 148

[Close]
BLAST of Carg19523 vs. TrEMBL
Match: tr|A0A1S3CKE7|A0A1S3CKE7_CUCME (Thioredoxin OS=Cucumis melo OX=3656 GN=LOC103501473 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.1e-63
Identity = 119/138 (86.23%), Postives = 129/138 (93.48%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MGLC SKSET+DD+SEHHVEFA GNV LITTKE+W+QK+EEAN  GKIVIANFSA+WCGP
Sbjct: 1   MGLCFSKSETRDDDSEHHVEFAAGNVHLITTKESWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CKVVAPFYSELSEKY SLMFLVVDVDELTDFST+WDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELTDFSTSWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 121 PELELKVTALADSLPPNQ 139
            ELE K+ A+ADSLPPN+
Sbjct: 121 IELEKKIIAVADSLPPNR 138

[Close]
BLAST of Carg19523 vs. TrEMBL
Match: tr|A0A0A0L068|A0A0A0L068_CUCSA (Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_4G334700 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.1e-63
Identity = 119/138 (86.23%), Postives = 129/138 (93.48%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MGLC SK+ETKDD+S+HHVEFA G V LITTKEAW+QK+EEAN  GKIVIANFSA+WCGP
Sbjct: 1   MGLCFSKAETKDDDSDHHVEFAAGKVHLITTKEAWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CKVVAPFYSELSEKY SLMFLVVDVDELTDFST+WDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELTDFSTSWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 121 PELELKVTALADSLPPNQ 139
            ELE K+TA+ADSLPPN+
Sbjct: 121 IELEKKITAVADSLPPNR 138

[Close]
BLAST of Carg19523 vs. TrEMBL
Match: tr|D8L5E3|D8L5E3_MEDTR (Thioredoxin OS=Medicago truncatula OX=3880 GN=25498857 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.4e-57
Identity = 105/138 (76.09%), Postives = 124/138 (89.86%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MG C +KS  +D++S+ HVEFA GNV LITTKEAW+QK+EEA KDGKIVIANFSA WCGP
Sbjct: 1   MGNCLAKSRDRDNDSDQHVEFAAGNVALITTKEAWDQKLEEAKKDGKIVIANFSAVWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CKV+AP+Y E+SEKY S+MFL+VDVDELTDFST+WDIKATPTFFFLK+GQQ+DKLVGANK
Sbjct: 61  CKVIAPYYCEMSEKYTSMMFLLVDVDELTDFSTSWDIKATPTFFFLKDGQQLDKLVGANK 120

Query: 121 PELELKVTALADSLPPNQ 139
           PELE K+ A+ADS+P N+
Sbjct: 121 PELEKKLVAIADSVPQNK 138

[Close]
BLAST of Carg19523 vs. TrEMBL
Match: tr|B7FGT5|B7FGT5_MEDTR (Thioredoxin OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.3e-56
Identity = 104/138 (75.36%), Postives = 123/138 (89.13%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MG C +KS  +D++S+ HVEFA GNV LITTKEAW+QK+EEA KDGKIVIANFSA WCGP
Sbjct: 1   MGNCLAKSRDRDNDSDQHVEFAAGNVALITTKEAWDQKLEEAKKDGKIVIANFSAVWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CKV+AP+Y E+SEKY S+MFL+VDVDELTDFST+WDIKATPTFFF K+GQQ+DKLVGANK
Sbjct: 61  CKVIAPYYCEMSEKYTSMMFLLVDVDELTDFSTSWDIKATPTFFFFKDGQQLDKLVGANK 120

Query: 121 PELELKVTALADSLPPNQ 139
           PELE K+ A+ADS+P N+
Sbjct: 121 PELEKKLVAIADSVPQNK 138

[Close]
BLAST of Carg19523 vs. TrEMBL
Match: tr|A0A1S2XQX9|A0A1S2XQX9_CICAR (Thioredoxin OS=Cicer arietinum OX=3827 GN=LOC101504235 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.7e-56
Identity = 104/137 (75.91%), Postives = 122/137 (89.05%), Query Frame = 0 

Query: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60
           MG C +K + KD++S+ HVEFA GNV LITTKE+W+QK+EEA KD KIVIANFSA WCGP
Sbjct: 1   MGNCLAKHQDKDNDSDQHVEFAAGNVVLITTKESWDQKLEEARKDDKIVIANFSAVWCGP 60

Query: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120
           CK++AP+Y ELSEKY S+MFL+VDVDELTDFST+WDIKATPTFFFLK+GQQ+DKLVGANK
Sbjct: 61  CKIIAPYYCELSEKYTSMMFLLVDVDELTDFSTSWDIKATPTFFFLKDGQQLDKLVGANK 120

Query: 121 PELELKVTALADSLPPN 138
           PELE KV A+ADS+P N
Sbjct: 121 PELEKKVVAIADSVPQN 137

The following BLAST results are available for this feature:
BLAST of Carg19523 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950143.13.0e-73100.00thioredoxin H-type-like [Cucurbita moschata] >XP_022950144.1 thioredoxin H-type-... [more]
XP_022978310.14.3e-7298.55thioredoxin H-type-like [Cucurbita maxima] >XP_022978312.1 thioredoxin H-type-li... [more]
XP_004142678.14.7e-6386.23PREDICTED: thioredoxin H-type [Cucumis sativus] >KGN54459.1 hypothetical protein... [more]
XP_008463273.14.7e-6386.23PREDICTED: thioredoxin H-type [Cucumis melo][more]
XP_022924951.13.8e-6080.43thioredoxin H-type-like isoform X1 [Cucurbita moschata] >XP_023517224.1 thioredo... [more]
BLAST of Carg19523 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G08710.13.7e-5471.85thioredoxin H-type 9[more]
AT3G56420.17.6e-3151.38Thioredoxin superfamily protein[more]
AT2G40790.11.9e-2943.51C-terminal cysteine residue is changed to a serine 2[more]
AT3G51030.11.9e-2647.52thioredoxin H-type 1[more]
AT1G45145.12.2e-2240.38thioredoxin H-type 5[more]
BLAST of Carg19523 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P85801|TRXH_POPJC9.4e-5570.07Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1[more]
sp|Q9C9Y6|TRXH9_ARATH6.7e-5371.85Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1[more]
sp|Q9AS75|TRH41_ORYSJ2.5e-4766.17Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 S... [more]
sp|Q0DKF1|TRH42_ORYSJ2.1e-4664.39Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 S... [more]
sp|Q9LXZ8|TRH10_ARATH1.4e-2951.38Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2[more]
BLAST of Carg19523 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CKE7|A0A1S3CKE7_CUCME3.1e-6386.23Thioredoxin OS=Cucumis melo OX=3656 GN=LOC103501473 PE=3 SV=1[more]
tr|A0A0A0L068|A0A0A0L068_CUCSA3.1e-6386.23Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_4G334700 PE=3 SV=1[more]
tr|D8L5E3|D8L5E3_MEDTR4.4e-5776.09Thioredoxin OS=Medicago truncatula OX=3880 GN=25498857 PE=2 SV=1[more]
tr|B7FGT5|B7FGT5_MEDTR1.3e-5675.36Thioredoxin OS=Medicago truncatula OX=3880 PE=2 SV=1[more]
tr|A0A1S2XQX9|A0A1S2XQX9_CICAR3.7e-5675.91Thioredoxin OS=Cicer arietinum OX=3827 GN=LOC101504235 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR017937Thioredoxin_CS
IPR005746Thioredoxin
IPR013766Thioredoxin_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19523-RACarg19523-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..45
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 57..66
score: 64.83
coord: 49..57
score: 43.52
coord: 96..107
score: 31.39
NoneNo IPR availableGENE3DG3DSA:3.40.30.10coord: 1..137
e-value: 1.2E-41
score: 143.4
NoneNo IPR availablePANTHERPTHR10438:SF267THIOREDOXIN-LIKE PROTEIN CXXS2-RELATEDcoord: 4..130
NoneNo IPR availableCDDcd02947TRX_familycoord: 40..122
e-value: 5.99629E-29
score: 101.866
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 29..125
e-value: 9.5E-24
score: 83.2
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 8..132
score: 11.641
IPR005746ThioredoxinPIRSFPIRSF000077Thioredoxincoord: 25..131
e-value: 7.0E-23
score: 78.6
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 4..130
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 50..68
IPR036249Thioredoxin-like superfamilySUPERFAMILYSSF52833Thioredoxin-likecoord: 18..127

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19523Cla012040Watermelon (97103) v1carwmB0626
Carg19523Csa4G334700Cucumber (Chinese Long) v2carcuB0650
Carg19523MELO3C025230Melon (DHL92) v3.5.1carmeB0627
Carg19523ClCG11G005530Watermelon (Charleston Gray)carwcgB0607
Carg19523ClCG04G006290Watermelon (Charleston Gray)carwcgB0609
Carg19523CSPI04G16660Wild cucumber (PI 183967)carcpiB0660
Carg19523Cucsa.130600Cucumber (Gy14) v1carcgyB0702
Carg19523CmaCh07G012160Cucurbita maxima (Rimu)carcmaB0888
Carg19523CmaCh03G002870Cucurbita maxima (Rimu)carcmaB0887
Carg19523CmoCh03G002970Cucurbita moschata (Rifu)carcmoB0862
Carg19523CmoCh07G012570Cucurbita moschata (Rifu)carcmoB0864
Carg19523CmoCh04G029800Cucurbita moschata (Rifu)carcmoB0863
Carg19523Lsi01G016250Bottle gourd (USVL1VR-Ls)carlsiB571
Carg19523Lsi03G002490Bottle gourd (USVL1VR-Ls)carlsiB572
Carg19523Cp4.1LG01g22000Cucurbita pepo (Zucchini)carcpeB0892
Carg19523Cp4.1LG10g07370Cucurbita pepo (Zucchini)carcpeB0891
Carg19523Cp4.1LG19g01590Cucurbita pepo (Zucchini)carcpeB0893
Carg19523CsGy4G015970Cucumber (Gy14) v2carcgybB0626
Carg19523MELO3C025230.2Melon (DHL92) v3.6.1carmedB0635
Carg19523CsaV3_4G027270Cucumber (Chinese Long) v3carcucB0661
Carg19523Cla97C11G212460Watermelon (97103) v2carwmbB0652
Carg19523Cla97C04G072870Watermelon (97103) v2carwmbB0654
Carg19523Bhi03G001775Wax gourdcarwgoB0747
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19523Carg05926Silver-seed gourdcarcarB024
Carg19523Carg12645Silver-seed gourdcarcarB319
The following block(s) are covering this gene:

None