Carg05926 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAATCTCAAATTTTGGATTTAATGGAAGGAAGTTATCTCATGATCGGTGCAGCTGTATTCATGTTCATCCGATCGTGACATGTGGAGTTGATCTCTGTTCTGATCCATTGCCACAAAAATTGGCTTGTCCTCCTCGATAATTTTCCCTCTGCTCTGACATTCTTCTTTCTCCTTCAACCAACGCACTTCGGCCTTTATTAGACCGCCATTTCTCTAAATTTTCGTTTTCTTTTTCGTCCTCTTCCTTCTCCTGACGCTGATTCTCCTGAGATTTCAGCATCAGCTTCAATGACGAGTTGTACAAGATGCTAAATCAACGCTATCCCGAGGTAAAAATGTTTTGTCCATGCTTATATGGAGAAGGAAATTATATTTATTCGATTCAACCTAAAATTCGCGAATATGTCAATTCTTTTGCGCTCGTTGTTTGTATTGATTGTTTACGAACCATTTGTGTTATTTTTTTTTTTTTTGTGTTTTTGTTCTCTCTGATTCTTTATCCTTTGTTGAATGTCTGCATCTTAGATTTGCTTCTGAAGTGAAATGGAATCCTCTGTCTTGATGCTGTGCGGCTATGGTTGTCCTTGTATTTGGATTCCGCAGTTTTTTCTGAAAAATTCGACGAGAGATCGTTTTTGGGAATACTTGAGGGATAAATTTTCGAAGTTGGTTTTAGGATTGTGATTGAATAGTTTGTAGGAACTAATGTATTGAGGTTGAAATCTCTATTCGTGATTTTGAAAGATAATTCTAACGAATGTTTTAATTTGATTTTTATCCCCTAAAGAACAGGACTGTGTTATTAACAGTGTCTGAATCATCCTTTTTCACGAATGTTGTATTGATTATTGTTGTCCTATATCTTTGTTTCCATGAAAGGAAAAAAAAAAGTTCACCTAGAAATCATTTCTTATGGTGATAACATATTAAATTTTTTTTTTAATTAGACTGAGAATCGAGAAACATTTCCCTTATGGAGGATAGTTTTCTTAAATAAGTTATCAAATATATATGTTTCAAATGTGCGCATTAAAGTCAAATTGAGCATAGCTTAATTGATGACCTTTCTAAAGGAAGAAAGTTCAAAACAGTTGAACTAAAGAAAAAAAGAATAATAATATTAAGAAACAACGAGGGAGGCATTACATCGTCCTCTTGTTACCTTCCCTTTACATGGCTTAAGGTCATGGTCCATAAAAATATTTGTATGATGTGACTTAACACTCCCCTGTTTAAACCGATGAGAAAAAAGAATTGGCATGTAACTTAGCTACTGGATGTTTCCATGTGCTAGGATTTCATGGTCTTGCACTTGATACCTATGTTAATTTCTTTTTGACTTGTGCTTGGAAAAGACTTAGTTTGGTTGAGTTTGAACTTTGAAGGCACGTTATCCCACTTGCGAGGTCAATTTACCAATAACAAATTTCGTCCCATTTTAGTGCAAAAATAGATCGCATATGAGTAGAAACCTACCTGTACCCTCCTCATCTTATCTTAAGAATTCTTATCCTAAGGGGTTAGAACAAAAATAACAATTGCACAAAGCAAAAGGAAAAAGAAGTTCAAAATAGTGTTTCGTGAAACTTGAACATAGTGTAAGAATTTTTCTTCAAGTTTCAAGTGCTACTAATTGCATCCTGCAGGCTCCATTGGAAAATGAATTAATATCTAATCCTGCATGTACTTTTGACTGATACATATCCTGCAACTTAACAGGTATCCTGTTTGGAAACAACCTTAATTTTTCATTTCAATGGGAAACTGCTGGACTAAGGTAAGCCTGGCTGGAAGTTCATCTCTTTTCCTTGGTCGTATGTTTTCAGGGTCTTATATTGGATTTCTGTTGTATGCTCTCTGCTTTATTTTGTTTGCTAGCCCTGAAGTTTCTGACCGTCCTTTGTATATTTTGTTTTTATTCATCAAGTTCTTGGGTCACCCTGGGTCCATATAAGACATAACCAAGTGGAGGTTTGAGAGAAATAACACTTAGCTTCTGTGGATTCTTTATCGTTCAGAATCATGCAAGTCCACTAAATTTTCAGAGGATCAAAATTTCCCTCTTTAATTATCATATCTGAACTCTCTTTTTCTTAAAGATTTTTTAACAAATCTACTTTAAAGAGATTTATTGTGAAATTCTTATATGAAGTTCCACTTCCTTGTTCGCCGATAGTCAACTTCATTTACATGATGTCAACGTTAAGTGTTGGAGTGTTACTGTTCAAGTTTTGGCAATCATCCTTGATACCCATAGTCTGAAAATTTCTTGAACGTGGTCCTCTTCTGATCATTAGATGCATGATTAGACCATAGGTTTTAATTTCTTTGTCATATCTTTAACGTTACAAAATTGTAAACCGTGTTGTTTCAACCTGCTCAAATAAATTCTGTCTTCTAAGTGAGTTACATCCACACTTGACATTCTGTAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGGTCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTAAGTTTCTCCCTATATACTATTTCTTCAATGTGAGGATGACGAATGAATTTCTAGTCCACTCATTCATTTTTAAAACCTCGATCCTGTTCAAGTAAGGTGGTCTAGTCCTCTTAGTTTTTTGTGTTTGGCATTTAACAAATTCAGGATGTTTTTTTCTTTATATAAGTGAATCGTGAAGAAAAATATACAGAGTTCTTTTACCTTAAAACTATGGAACAGGTCATTGCAAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAATATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGTAAGTAAAAACACTTTTTGGTTGCCCTTCGTTTATTTATATAAATTCGTGTTTTTAGAGGCGTTGAAGATGAGTATGAATCTAGCTCCCTAGTCCTAATTTAAACTAATAAGGGTCTAGCACTTTATTGTTTTCTATTGCGAATTGATTGGAAATTTCTTGGACTGATCTCAGGAGCTCAGTAAATCTTGGGACATCAAAGCCACTCCAACGTTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGGTAATGAAATCTCAGAGTTGATAAATTTTTCTTCCTCATTTATTATCATACATAATACATTCATGCATAGAAATCTAAAAGCACAAAAAGATAAAAGAGGAAATCTTTTCGGCTTTATTATCACATGTCATTGTGAAATTTATTCATATTCGAGGATTAAATCAATCTTTATGGTTCCTTGCTTGCAAGACAACACGATGTACTTTTATCAAATGCAATGCAATTTGAAGCACTTACCAAACTATAATTGTTGTCTCATTGTTCAATCACGAGAATTTTAAAGCTTATTGTAGCATATAAAAAATATGCCCCTCCCCTTGTTTAGTTACATCCCGTTGAAGCAGCAACTTTTACAAGCAAACCAAAGAGAGCAGAGATGGTTTGGAGAAAAAGGGACCGTGATCAGTATCAAAAAGCTAAAGGGTCAACGGGTCAAGTTTTACTTCAATTACTTAAAATACGTTTGGTTTCTGATAGCCATCCCTTTATCATGGCTTCTTATTGCTATGGTTTTATCATTCGATCATACATTGTTCTTATATACACTCGTTTCACTTTATCAGCACCCGTTCTATGCCTCCGGTTGGACCTGACCTTGGAAGCATGGCAGCCAGCGTCAAATCCGTTCACGACGGAGGTTAGAGGTGCTATGCCTTCTAAATTCGTTTTAAGA GAGGAATCTCAAATTTTGGATTTAATGGAAGGAAGTTATCTCATGATCGGTGCAGCTGTATTCATGTTCATCCGATCGTGACATGTGGAGTTGATCTCTGTTCTGATCCATTGCCACAAAAATTGGCTTGTCCTCCTCGATAATTTTCCCTCTGCTCTGACATTCTTCTTTCTCCTTCAACCAACGCACTTCGGCCTTTATTAGACCGCCATTTCTCTAAATTTTCGTTTTCTTTTTCGTCCTCTTCCTTCTCCTGACGCTGATTCTCCTGAGATTTCAGCATCAGCTTCAATGACGAGTTGTACAAGATGCTAAATCAACGCTATCCCGAGGTATCCTGTTTGGAAACAACCTTAATTTTTCATTTCAATGGGAAACTGCTGGACTAAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGGTCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTCATTGCAAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAATATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGAGCTCAGTAAATCTTGGGACATCAAAGCCACTCCAACGTTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGTTACATCCCGTTGAAGCAGCAACTTTTACAAGCAAACCAAAGAGAGCAGAGATGGTTTGGAGAAAAAGGGACCGTGATCAGTATCAAAAAGCTAAAGGGTCAACGGCACCCGTTCTATGCCTCCGGTTGGACCTGACCTTGGAAGCATGGCAGCCAGCGTCAAATCCGTTCACGACGGAGGTTAGAGGTGCTATGCCTTCTAAATTCGTTTTAAGA ATGGGAAACTGCTGGACTAAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGGTCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTCATTGCAAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAATATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGAGCTCAGTAAATCTTGGGACATCAAAGCCACTCCAACGTTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGTTACATCCCGTTGAAGCAGCAACTTTTACAAGCAAACCAAAGAGAGCAGAGATGGTTTGGAGAAAAAGGGACCGTGATCAGTATCAAAAAGCTAAAGGGTCAACGGCACCCGTTCTATGCCTCCGGTTGGACCTGACCTTGGAAGCATGGCAGCCAGCGTCAAATCCGTTCACGACGGAGGTTAGAGGTGCTATGCCTTCTAAATTCGTTTTAAGA MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITAMDESLHPVEAATFTSKPKRAEMVWRKRDRDQYQKAKGSTAPVLCLRLDLTLEAWQPASNPFTTEVRGAMPSKFVLR
BLAST of Carg05926 vs. NCBI nr
Match: XP_022960245.1 (thioredoxin H4-1-like [Cucurbita moschata] >XP_023553289.1 thioredoxin H4-1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.6 bits (714), Expect = 8.3e-72 Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0
BLAST of Carg05926 vs. NCBI nr
Match: XP_022989932.1 (thioredoxin H4-1-like [Cucurbita maxima]) HSP 1 Score: 276.6 bits (706), Expect = 7.1e-71 Identity = 137/144 (95.14%), Postives = 139/144 (96.53%), Query Frame = 0
BLAST of Carg05926 vs. NCBI nr
Match: XP_023553281.1 (thioredoxin H4-1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 261.9 bits (668), Expect = 1.8e-66 Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 0
BLAST of Carg05926 vs. NCBI nr
Match: XP_004141512.2 (PREDICTED: thioredoxin H4-1 isoform X1 [Cucumis sativus] >XP_011656040.1 PREDICTED: thioredoxin H4-1 isoform X1 [Cucumis sativus] >KGN52589.1 hypothetical protein Csa_5G645140 [Cucumis sativus]) HSP 1 Score: 257.7 bits (657), Expect = 3.4e-65 Identity = 125/134 (93.28%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of Carg05926 vs. NCBI nr
Match: XP_008459484.1 (PREDICTED: thioredoxin H-type [Cucumis melo]) HSP 1 Score: 255.8 bits (652), Expect = 1.3e-64 Identity = 124/134 (92.54%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of Carg05926 vs. TAIR10
Match: AT3G08710.1 (thioredoxin H-type 9) HSP 1 Score: 149.4 bits (376), Expect = 2.4e-36 Identity = 72/137 (52.55%), Postives = 101/137 (73.72%), Query Frame = 0
BLAST of Carg05926 vs. TAIR10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2) HSP 1 Score: 132.1 bits (331), Expect = 3.9e-31 Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of Carg05926 vs. TAIR10
Match: AT3G56420.1 (Thioredoxin superfamily protein) HSP 1 Score: 132.1 bits (331), Expect = 3.9e-31 Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 0
BLAST of Carg05926 vs. TAIR10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin) HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21 Identity = 44/105 (41.90%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of Carg05926 vs. TAIR10
Match: AT5G39950.1 (thioredoxin 2) HSP 1 Score: 99.4 bits (246), Expect = 2.8e-21 Identity = 42/131 (32.06%), Postives = 78/131 (59.54%), Query Frame = 0
BLAST of Carg05926 vs. Swiss-Prot
Match: sp|P85801|TRXH_POPJC (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 7.7e-37 Identity = 75/137 (54.74%), Postives = 99/137 (72.26%), Query Frame = 0
BLAST of Carg05926 vs. Swiss-Prot
Match: sp|Q9C9Y6|TRXH9_ARATH (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 4.3e-35 Identity = 72/137 (52.55%), Postives = 101/137 (73.72%), Query Frame = 0
BLAST of Carg05926 vs. Swiss-Prot
Match: sp|Q9AS75|TRH41_ORYSJ (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 8.0e-34 Identity = 69/134 (51.49%), Postives = 94/134 (70.15%), Query Frame = 0
BLAST of Carg05926 vs. Swiss-Prot
Match: sp|Q0DKF1|TRH42_ORYSJ (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31 Identity = 65/131 (49.62%), Postives = 90/131 (68.70%), Query Frame = 0
BLAST of Carg05926 vs. Swiss-Prot
Match: sp|Q8GXV2|CXXS2_ARATH (Thioredoxin-like protein CXXS2 OS=Arabidopsis thaliana OX=3702 GN=CXXS2 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 7.0e-30 Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of Carg05926 vs. TrEMBL
Match: tr|A0A0A0KUM3|A0A0A0KUM3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 2.2e-65 Identity = 125/134 (93.28%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of Carg05926 vs. TrEMBL
Match: tr|A0A1S3CBI4|A0A1S3CBI4_CUCME (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 8.5e-65 Identity = 124/134 (92.54%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of Carg05926 vs. TrEMBL
Match: tr|A0A1U7VF58|A0A1U7VF58_NICSY (Thioredoxin OS=Nicotiana sylvestris OX=4096 GN=LOC104212819 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41 Identity = 82/134 (61.19%), Postives = 101/134 (75.37%), Query Frame = 0
BLAST of Carg05926 vs. TrEMBL
Match: tr|A0A1S3X6E1|A0A1S3X6E1_TOBAC (Thioredoxin OS=Nicotiana tabacum OX=4097 GN=LOC107761566 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41 Identity = 82/134 (61.19%), Postives = 101/134 (75.37%), Query Frame = 0
BLAST of Carg05926 vs. TrEMBL
Match: tr|A0A1S4CWG8|A0A1S4CWG8_TOBAC (Thioredoxin OS=Nicotiana tabacum OX=4097 GN=LOC107823361 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.7e-41 Identity = 82/134 (61.19%), Postives = 101/134 (75.37%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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