Carg18847 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATTGAATAAACAGGGAGGTGGATTGTGAGATCCCACGTCGGTTGGATATAGAAAGAAAAACCTCTCCCTAATAGACGCGTTTTAAAAGTGGACGACGATATGTAATGGGCCAAAATGGATATTCTCCGCCAAACAACCATGAAAGAAAAACATCTCACAATGCAACCATTATGAATGATCCAAAAGTCCCGCCCATAAAAAAGGCTCATTTCTTCTTCACACACCATTTCCATGATGAGGCTTTGTAGCAAAGTTTCTTGTTAACTTCATTCCCCAAACTATTGAAATTGTTCTTCTAAAAGGTCTTTTTCTTTCCATCTCTTCCAAATTTATCTTCCATTATACAATAATGTCTTTCACATCTCATTACATTTCTTTGTTAATCATCGTTTTGACGATGGCCCCATTGAGTTCATGTCAGTTCGATTTGATCCGAACTCTTCTTGGTCTCACCCACATCCAAGGAACTCTCTATTGTACTCTCAACGGCAACATGATCTACGGCCTTTTGACCCCAACTTTTCCGAGTGAGTTAAAGTTGCAGTGCTTTTTTTCTTTTTTTTTTTTTTTTGTCTCTAAACATTTTGGAGTTTATTATGAGGTGTTGAAGATGCGGCGGTGGAAATGCACTGCGGAGCCGGCGGAACTGTGATTTCGTCCGTCAAATCCGATGCGACCGGCAGGTTCTCAATGCTTCTCGATGCGCCTCAACTGCTACTCTCCTTTTTACTAAACAATTGCAGCCTTGTCGTCACGACGCCGCTCGTCAATTGCAACGGCGCTATGCCGTCGTTTGGCGCCCTCGCCTCGCCGCTGCAACTCATCGGAAATACGTTTCTTGGACTCTTCAATATCACCAATATCATTCCGGTAGGGTTCCGATTCCTTCCGATTCTTTAATATTCAAGAAATATGTTCACCATTGTTGATGTAGCTAACTAAATAAACGGAGTCCTTAACTTGTTGCGCTGTAATGATGTATGTGATGATCGAGTACTAAATCTCTACTTGGCTAATTTTTAGGTGCTTTGGTTTGT CATTGAATAAACAGGGAGGTGGATTGTGAGATCCCACGTCGGTTGGATATAGAAAGAAAAACCTCTCCCTAATAGACGCGTTTTAAAAGTGGACGACGATATGTAATGGGCCAAAATGGATATTCTCCGCCAAACAACCATGAAAGAAAAACATCTCACAATGCAACCATTATGAATGATCCAAAAGTCCCGCCCATAAAAAAGGCTCATTTCTTCTTCACACACCATTTCCATGATGAGGCTTTGTAGCAAAGTTTCTTGTTAACTTCATTCCCCAAACTATTGAAATTGTTCTTCTAAAAGGTCTTTTTCTTTCCATCTCTTCCAAATTTATCTTCCATTATACAATAATGTCTTTCACATCTCATTACATTTCTTTGTTAATCATCGTTTTGACGATGGCCCCATTGAGTTCATGTCAGTTCGATTTGATCCGAACTCTTCTTGGTCTCACCCACATCCAAGGAACTCTCTATTGTACTCTCAACGGCAACATGATCTACGGCCTTTTGACCCCAACTTTTCCGAATGCGGCGGTGGAAATGCACTGCGGAGCCGGCGGAACTGTGATTTCGTCCGTCAAATCCGATGCGACCGGCAGGTTCTCAATGCTTCTCGATGCGCCTCAACTGCTACTCTCCTTTTTACTAAACAATTGCAGCCTTGTCGTCACGACGCCGCTCGTCAATTGCAACGGCGCTATGCCGTCGTTTGGCGCCCTCGCCTCGCCGCTGCAACTCATCGGAAATACGTTTCTTGGACTCTTCAATATCACCAATATCATTCCGGTAGGGTTCCGATTCCTTCCGATTCTTTAATATTCAAGAAATATGTTCACCATTGTTGATGTAGCTAACTAAATAAACGGAGTCCTTAACTTGTTGCGCTGTAATGATGTATGTGATGATCGAGTACTAAATCTCTACTTGGCTAATTTTTAGGTGCTTTGGTTTGT ATGTCTTTCACATCTCATTACATTTCTTTGTTAATCATCGTTTTGACGATGGCCCCATTGAGTTCATGTCAGTTCGATTTGATCCGAACTCTTCTTGGTCTCACCCACATCCAAGGAACTCTCTATTGTACTCTCAACGGCAACATGATCTACGGCCTTTTGACCCCAACTTTTCCGAATGCGGCGGTGGAAATGCACTGCGGAGCCGGCGGAACTGTGATTTCGTCCGTCAAATCCGATGCGACCGGCAGGTTCTCAATGCTTCTCGATGCGCCTCAACTGCTACTCTCCTTTTTACTAAACAATTGCAGCCTTGTCGTCACGACGCCGCTCGTCAATTGCAACGGCGCTATGCCGTCGTTTGGCGCCCTCGCCTCGCCGCTGCAACTCATCGGAAATACGTTTCTTGGACTCTTCAATATCACCAATATCATTCCGGTAGGGTTCCGATTCCTTCCGATTCTTTAA MSFTSHYISLLIIVLTMAPLSSCQFDLIRTLLGLTHIQGTLYCTLNGNMIYGLLTPTFPNAAVEMHCGAGGTVISSVKSDATGRFSMLLDAPQLLLSFLLNNCSLVVTTPLVNCNGAMPSFGALASPLQLIGNTFLGLFNITNIIPVGFRFLPIL
BLAST of Carg18847 vs. NCBI nr
Match: XP_023000425.1 (phylloplanin-like [Cucurbita maxima]) HSP 1 Score: 290.0 bits (741), Expect = 4.6e-75 Identity = 149/155 (96.13%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of Carg18847 vs. NCBI nr
Match: XP_022930243.1 (phylloplanin-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 260.4 bits (664), Expect = 3.9e-66 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of Carg18847 vs. NCBI nr
Match: XP_022930242.1 (uncharacterized protein LOC111436755 isoform X1 [Cucurbita moschata]) HSP 1 Score: 260.4 bits (664), Expect = 3.9e-66 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of Carg18847 vs. NCBI nr
Match: XP_022138800.1 (phylloplanin-like [Momordica charantia]) HSP 1 Score: 218.4 bits (555), Expect = 1.7e-53 Identity = 113/155 (72.90%), Postives = 129/155 (83.23%), Query Frame = 0
BLAST of Carg18847 vs. NCBI nr
Match: XP_008458423.2 (PREDICTED: phylloplanin-like [Cucumis melo]) HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46 Identity = 102/152 (67.11%), Postives = 120/152 (78.95%), Query Frame = 0
BLAST of Carg18847 vs. TAIR10
Match: AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 109.0 bits (271), Expect = 2.7e-24 Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of Carg18847 vs. TAIR10
Match: AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 89.4 bits (220), Expect = 2.2e-18 Identity = 49/140 (35.00%), Postives = 80/140 (57.14%), Query Frame = 0
BLAST of Carg18847 vs. Swiss-Prot
Match: sp|Q56S59|PHYLL_TOBAC (Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.3e-15 Identity = 56/144 (38.89%), Postives = 81/144 (56.25%), Query Frame = 0
BLAST of Carg18847 vs. TrEMBL
Match: tr|A0A1S3C7U3|A0A1S3C7U3_CUCME (phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103497845 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.0e-46 Identity = 102/152 (67.11%), Postives = 120/152 (78.95%), Query Frame = 0
BLAST of Carg18847 vs. TrEMBL
Match: tr|A0A2N9H7J4|A0A2N9H7J4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35406 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30 Identity = 78/149 (52.35%), Postives = 104/149 (69.80%), Query Frame = 0
BLAST of Carg18847 vs. TrEMBL
Match: tr|D7SYD8|D7SYD8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g02280 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30 Identity = 82/157 (52.23%), Postives = 104/157 (66.24%), Query Frame = 0
BLAST of Carg18847 vs. TrEMBL
Match: tr|A0A2N9GZ37|A0A2N9GZ37_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35408 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.9e-30 Identity = 76/149 (51.01%), Postives = 104/149 (69.80%), Query Frame = 0
BLAST of Carg18847 vs. TrEMBL
Match: tr|A0A2I4F1U4|A0A2I4F1U4_9ROSI (phylloplanin-like OS=Juglans regia OX=51240 GN=LOC108994753 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.9e-30 Identity = 71/149 (47.65%), Postives = 102/149 (68.46%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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